A0A087WP98_MOUSE Loading...

Prothymosin alpha

Prothymosin alpha may mediate immune function by conferring resistance to certain opportunistic infections.

AlphaFold DB , UniProt , Accession A0A087WP98, Species MOUSE (Mus musculus, Mouse), Gene Ptma, Length 58 aa.

						>A0A087WP98_MOUSE|A0A087WP98|Ptma
MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAVRRRMEMKMRKLRLLRASG
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	50.9	Low	52.8	Low	244 Å²	244	118.9 Å²	118.9	100%	1.202	72%	0.716	S	S	*	*				0	101	0	-61	-152.2	-148.3	0	0	106.2	D3	M1-D3 PolarHBondContact O-N 2.88Å
2	S	50	Low	53	Low	123 Å²	123	116.3 Å²	116.3	86%	0.86	69%	0.694	S	S	*	*			trans	-85.9	106.2	179.2	-56.2	0	0	0	0	106.6	A4	S2-A4 PolarHBondContact O-N 3.41Å
3	D	50.8	Low	53.1	Low	151 Å²	151	113.3 Å²	113.3	81%	0.807	68%	0.677	S	S	*	*			trans	-64.1	87.2	170	-166.9	39.2	0	0	0	107.3	M1 A5	M1-D3 PolarHBondContact O-N 2.88Å; D3-A5 PolarHBondContact O-N 2.83Å
4	A	58.3	Low	52.9	Low	86 Å²	86	111.8 Å²	111.8	71%	0.711	67%	0.669	S	S	*	*			trans	-70	84.2	167	0	0	0	0	0	105.5	S2 V6	S2-A4 PolarHBondContact O-N 3.41Å; A4-V6 PolarHBondContact O-N 2.69Å
5	A	60.7	Low	53.3	Low	81 Å²	81	114.1 Å²	114.1	67%	0.669	67%	0.667	S	S	*	*			trans	-61.7	81	167.5	0	0	0	0	0	107.8	D3 D7	D3-A5 PolarHBondContact O-N 2.83Å; A5-D7 PolarHBondContact O-N 3.2Å
6	V	53.6	Low	53.5	Low	100 Å²	100	111.3 Å²	111.3	61%	0.606	65%	0.648	S	S	*	*			trans	12	95.4	150.6	-169.2	0	0	0	0	111.8	A4 T8	A4-V6 PolarHBondContact O-N 2.69Å; V6-T8 HydrophobicContact CG1-CG2 3.29Å; V6-T8 VanDerWaalsContact CG1-OG1 3.28Å; V6-T8 WeakPolarHBondContact CG1-OG1 3.14Å; V6-T8 PolarHBondContact O-N 2.59Å
7	D	46.6	Very low	53.5	Low	126 Å²	126	111.5 Å²	111.5	67%	0.674	65%	0.646	S	S	*	*	T	Hydrogen-bonded Turn	trans	-65	31.1	169.6	-155.7	4.1	0	0	0	112.2	A5 S10	A5-D7 PolarHBondContact O-N 3.2Å; D7-S10 WeakPolarHBondContact OD1-CB 3.19Å; D7-S10 PolarHBondContact OD1-OG 3.44Å
8	T	54.7	Low	53.6	Low	89 Å²	89	113.9 Å²	113.9	55%	0.546	65%	0.647	S	S	.	*	T	Hydrogen-bonded Turn	trans	-76	-16	169.5	54.7	0	0	0	0	111.2	V6 S10 I12	V6-T8 HydrophobicContact CG1-CG2 3.29Å; V6-T8 VanDerWaalsContact CG1-OG1 3.28Å; V6-T8 WeakPolarHBondContact CG1-OG1 3.14Å; V6-T8 PolarHBondContact O-N 2.59Å; T8-S10 VanDerWaalsContact C-N 3.28Å; T8-S10 PolarHBondContact O-N 2.79Å; T8-I12 WeakPolarHBondContact O-CD1 3.28Å; T8-I12 WeakPolarHBondContact O-CG1 3.45Å
9	S	54.8	Low	53.8	Low	78 Å²	78	112.2 Å²	112.2	55%	0.545	63%	0.633	S	S	.	*	G	3₁₀ helix	trans	-71.2	-21.2	175.6	71.4	0	0	0	0	113.2	T13	S9-T13 WeakPolarHBondContact O-CG2 3.04Å
10	S	53.6	Low	53.9	Low	78 Å²	78	113.3 Å²	113.3	55%	0.545	63%	0.63	S	S	.	*	G	3₁₀ helix	trans	-77.7	-19.6	-176.8	-66.9	0	0	0	0	114.6	D7 T8	D7-S10 WeakPolarHBondContact OD1-CB 3.19Å; D7-S10 PolarHBondContact OD1-OG 3.44Å; T8-S10 VanDerWaalsContact C-N 3.28Å; T8-S10 PolarHBondContact O-N 2.79Å
11	E	47.3	Very low	54.1	Low	152 Å²	152	115.5 Å²	115.5	71%	0.71	63%	0.634	S	S	*	*	G	3₁₀ helix	trans	-106.1	4.5	174.4	-152.1	177	139.7	0	0	113.6
12	I	54.3	Low	54.3	Low	88 Å²	88	107.4 Å²	107.4	45%	0.451	59%	0.593	S	S	.	*	T	Hydrogen-bonded Turn	trans	-96.2	-17.7	176.1	-64.9	169.6	0	0	0	111.2	T8 T14 D16	T8-I12 WeakPolarHBondContact O-CD1 3.28Å; T8-I12 WeakPolarHBondContact O-CG1 3.45Å; I12-T14 VanDerWaalsContact C-N 3.34Å; I12-T14 PolarHBondContact O-N 3.22Å; I12-D16 HydrophobicContact CG2-CB 3.89Å; I12-D16 WeakPolarHBondContact O-CB 3.22Å; I12-D16 PolarHBondContact O-N 3.22Å
13	T	54.7	Low	54.5	Low	77 Å²	77	106.1 Å²	106.1	47%	0.472	58%	0.579	S	S	.	*	T	Hydrogen-bonded Turn	trans	-69.7	-18.7	-172.4	52.8	0	0	0	0	115.5	S9 L17	S9-T13 WeakPolarHBondContact O-CG2 3.04Å; T13-L17 VanDerWaalsContact O-CB 3.26Å; T13-L17 WeakPolarHBondContact O-CB 3.26Å; T13-L17 WeakPolarHBondContact O-CD1 3.42Å; T13-L17 WeakPolarHBondContact O-CG 3.2Å
14	T	50.8	Low	54.6	Low	92 Å²	92	103.2 Å²	103.2	56%	0.564	57%	0.567	S	S	*	*	T	Hydrogen-bonded Turn	trans	-100.5	-27.4	-178.3	58.9	0	0	0	0	114.6	I12 K18	I12-T14 VanDerWaalsContact C-N 3.34Å; I12-T14 PolarHBondContact O-N 3.22Å; T14-K18 WeakPolarHBondContact O-CG 3.01Å
15	K	58.6	Low	54.5	Low	146 Å²	146	104.6 Å²	104.6	64%	0.635	56%	0.559	S	S	*	*	H	α-helix	trans	-83.2	-43	176.5	-68	175.3	-176.9	164.6	0	111	K18 E19	K15-K18 PolarHBondContact O-N 3.17Å; K15-E19 PolarHBondContact O-N 3.1Å
16	D	56	Low	54.4	Low	70 Å²	70	103.7 Å²	103.7	37%	0.374	54%	0.541	S	S	.	.	H	α-helix	trans	-72.6	-33.2	-178.6	-141.3	65.7	0	0	0	111.9	I12 K18 E19 K20	I12-D16 HydrophobicContact CG2-CB 3.89Å; I12-D16 WeakPolarHBondContact O-CB 3.22Å; I12-D16 PolarHBondContact O-N 3.22Å; D16-K18 VanDerWaalsContact C-N 3.35Å; D16-E19 PolarHBondContact O-N 3.39Å; D16-K20 WeakPolarHBondContact O-CB 3.39Å; D16-K20 WeakPolarHBondContact O-CG 3.44Å; D16-K20 PolarHBondContact O-N 2.86Å
17	L	53.4	Low	54.5	Low	115 Å²	115	102.9 Å²	102.9	60%	0.602	55%	0.545	S	S	*	.	H	α-helix	trans	-66.7	-33.6	171.1	-76.2	-179.8	0	0	0	112.6	T13 K21	T13-L17 VanDerWaalsContact O-CB 3.26Å; T13-L17 WeakPolarHBondContact O-CB 3.26Å; T13-L17 WeakPolarHBondContact O-CD1 3.42Å; T13-L17 WeakPolarHBondContact O-CG 3.2Å; L17-K21 WeakPolarHBondContact O-CB 3.4Å; L17-K21 PolarHBondContact O-N 3.36Å; L17-K21 VanDerWaalsContact O-N 3.1Å
18	K	56.5	Low	54.9	Low	154 Å²	154	103.5 Å²	103.5	67%	0.67	54%	0.543	S	S	*	.	H	α-helix	trans	-72.2	-37.1	173.9	-77.2	178.2	-178.5	176.7	0	111.7	T14 K15 D16 K21 E22	T14-K18 WeakPolarHBondContact O-CG 3.01Å; K15-K18 PolarHBondContact O-N 3.17Å; D16-K18 VanDerWaalsContact C-N 3.35Å; K18-K21 PolarHBondContact O-N 2.91Å; K18-E22 WeakPolarHBondContact O-CB 3.32Å; K18-E22 PolarHBondContact O-N 3.35Å
19	E	56.3	Low	55.1	Low	82 Å²	82	102.2 Å²	102.2	38%	0.383	53%	0.533	S	S	.	.	H	α-helix	trans	-70.7	-40.7	177.2	-162	164.9	-169.4	0	0	111.7	K15 D16 K21 E22 V23	K15-E19 PolarHBondContact O-N 3.1Å; D16-E19 PolarHBondContact O-N 3.39Å; E19-K21 VanDerWaalsContact C-N 3.29Å; E19-K21 PolarHBondContact O-N 3.23Å; E19-E22 PolarHBondContact O-N 3.39Å; E19-E22 VanDerWaalsContact O-N 3.17Å; E19-V23 WeakPolarHBondContact O-CG2 3.42Å; E19-V23 PolarHBondContact O-N 3.5Å
20	K	56.8	Low	55.2	Low	133 Å²	133	101.8 Å²	101.8	58%	0.578	54%	0.541	S	S	*	.	H	α-helix	trans	-61	-36.7	169.7	-74.7	-178.8	-177.2	-179.8	0	112.4	D16 V24	D16-K20 WeakPolarHBondContact O-CB 3.39Å; D16-K20 WeakPolarHBondContact O-CG 3.44Å; D16-K20 PolarHBondContact O-N 2.86Å; K20-V24 WeakPolarHBondContact O-CG2 3.36Å; K20-V24 PolarHBondContact O-N 3.01Å; K20-V24 VanDerWaalsContact O-N 3.17Å
21	K	56.9	Low	55.3	Low	161 Å²	161	109.3 Å²	109.3	70%	0.7	56%	0.558	S	S	*	*	H	α-helix	trans	-68.4	-37.2	174.1	-133.3	176.7	-178	-176.3	0	112.4	L17 K18 E19 V24 E25	L17-K21 WeakPolarHBondContact O-CB 3.4Å; L17-K21 PolarHBondContact O-N 3.36Å; L17-K21 VanDerWaalsContact O-N 3.1Å; K18-K21 PolarHBondContact O-N 2.91Å; E19-K21 VanDerWaalsContact C-N 3.29Å; E19-K21 PolarHBondContact O-N 3.23Å; K21-V24 PolarHBondContact O-N 3.48Å; K21-E25 PolarHBondContact O-N 3.17Å
22	E	55	Low	55.8	Low	73 Å²	73	109.1 Å²	109.1	34%	0.341	56%	0.562	S	S	.	*	H	α-helix	trans	-70.3	-33.6	176.8	-168.8	-179.9	169.8	0	0	112.5	K18 E19 E26 K50	K18-E22 WeakPolarHBondContact O-CB 3.32Å; K18-E22 PolarHBondContact O-N 3.35Å; E19-E22 PolarHBondContact O-N 3.39Å; E19-E22 VanDerWaalsContact O-N 3.17Å; E22-E26 PolarHBondContact O-N 2.59Å; E22-K50 IonicContact OE1-NZ 2.59Å; E22-K50 IonicContact OE2-NZ 3.06Å; E22-K50 PolarHBondContact OE2-NZ 3.44Å
23	V	55.8	Low	55.9	Low	96 Å²	96	107.6 Å²	107.6	58%	0.582	56%	0.562	S	S	*	*	H	α-helix	trans	-66.6	-40.9	171.7	173.4	0	0	0	0	111.2	E19 E26 A27	E19-V23 WeakPolarHBondContact O-CG2 3.42Å; E19-V23 PolarHBondContact O-N 3.5Å; V23-E26 PolarHBondContact O-N 3.39Å; V23-A27 PolarHBondContact O-N 3.47Å
24	V	52.7	Low	55.9	Low	90 Å²	90	109.5 Å²	109.5	55%	0.545	58%	0.576	S	S	.	*	H	α-helix	trans	-65.8	-43.8	176	170.6	0	0	0	0	111	K20 K21 E26 A27 E28	K20-V24 WeakPolarHBondContact O-CG2 3.36Å; K20-V24 PolarHBondContact O-N 3.01Å; K20-V24 VanDerWaalsContact O-N 3.17Å; K21-V24 PolarHBondContact O-N 3.48Å; V24-E26 PolarHBondContact O-N 3.02Å; V24-A27 PolarHBondContact O-N 2.95Å; V24-E28 PolarHBondContact O-N 2.92Å
25	E	55.7	Low	56.3	Low	115 Å²	115	109.9 Å²	109.9	54%	0.537	59%	0.589	S	S	.	*	H	α-helix	trans	-67.6	-30.2	177.1	-95.8	-148	-173.3	0	0	114.1	K21 A27 E28 N29	K21-E25 PolarHBondContact O-N 3.17Å; E25-A27 VanDerWaalsContact C-N 3.35Å; E25-E28 PolarHBondContact O-N 3.47Å; E25-N29 WeakPolarHBondContact O-CB 3.44Å; E25-N29 VanDerWaalsContact O-CG 3.29Å; E25-N29 PolarHBondContact O-N 3.08Å; E25-N29 PolarHBondContact OE2-ND2 3.22Å
26	E	58	Low	56.5	Low	63 Å²	63	107.9 Å²	107.9	29%	0.294	59%	0.585	S	S	.	*	H	α-helix	trans	-68.1	-33.6	176.9	-100.6	-122.4	168.1	0	0	113.4	E22 V23 V24 E28 G30 R43 K47	E22-E26 PolarHBondContact O-N 2.59Å; V23-E26 PolarHBondContact O-N 3.39Å; V24-E26 PolarHBondContact O-N 3.02Å; E26-E28 VanDerWaalsContact C-N 3.33Å; E26-G30 PolarHBondContact O-N 3.06Å; E26-R43 WeakPolarHBondContact OE1-CD 3.13Å; E26-K47 WeakPolarHBondContact OE1-CD 3.17Å; E26-K47 WeakPolarHBondContact OE1-CE 2.94Å; E26-K47 IonicContact OE1-NZ 2.7Å; E26-K47 PolarHBondContact OE1-NZ 3.08Å; E26-K47 VanDerWaalsContact OE1-NZ 3.1Å; E26-K47 WeakPolarHBondContact OE2-CE 3.37Å; E26-K47 IonicContact OE2-NZ 3.96Å; E26-K47 PolarHBondContact OE2-NZ 3.37Å
27	A	55.3	Low	56.9	Low	83 Å²	83	107.1 Å²	107.1	69%	0.686	59%	0.593	S	S	*	*	H	α-helix	trans	-69.6	-31.9	176.6	0	0	0	0	0	112.1	V23 V24 E25	V23-A27 PolarHBondContact O-N 3.47Å; V24-A27 PolarHBondContact O-N 2.95Å; E25-A27 VanDerWaalsContact C-N 3.35Å
28	E	56	Low	58	Low	139 Å²	139	105.4 Å²	105.4	65%	0.65	59%	0.585	S	S	*	*	H	α-helix	trans	-86.5	-39.5	178	-69.5	-175.6	140	0	0	112.5	V24 E25 E26 G30 R31	V24-E28 PolarHBondContact O-N 2.92Å; E25-E28 PolarHBondContact O-N 3.47Å; E26-E28 VanDerWaalsContact C-N 3.33Å; E28-G30 VanDerWaalsContact C-N 3.26Å; E28-G30 PolarHBondContact O-N 3.43Å; E28-R31 PolarHBondContact O-N 3.32Å
29	N	59.5	Low	58.9	Low	61 Å²	61	100.5 Å²	100.5	33%	0.326	57%	0.573	S	S	.	*	H	α-helix	trans	-75.1	-9	-179.5	-75.8	-19.5	0	0	0	114.5	E25 R31	E25-N29 WeakPolarHBondContact O-CB 3.44Å; E25-N29 VanDerWaalsContact O-CG 3.29Å; E25-N29 PolarHBondContact O-N 3.08Å; E25-N29 PolarHBondContact OE2-ND2 3.22Å; N29-R31 PolarHBondContact O-N 3.28Å
30	G	55.1	Low	59.9	Low	70 Å²	70	100.4 Å²	100.4	72%	0.722	58%	0.578	S	S	*	*	T	Hydrogen-bonded Turn	trans	-72.9	-14.9	171.8	0	0	0	0	0	113.6	E26 E28	E26-G30 PolarHBondContact O-N 3.06Å; E28-G30 VanDerWaalsContact C-N 3.26Å; E28-G30 PolarHBondContact O-N 3.43Å
31	R	56.5	Low	61	Low	235 Å²	235	101.7 Å²	101.7	89%	0.887	58%	0.579	S	S	*	*	S	Bend	trans	-96.7	-18.5	-176	-145.2	178.1	-173	-165.8	1.3	114.4	E28 N29	E28-R31 PolarHBondContact O-N 3.32Å; N29-R31 PolarHBondContact O-N 3.28Å
32	D	58.5	Low	62.1	Low	148 Å²	148	102.8 Å²	102.8	79%	0.791	58%	0.579	S	S	*	*	S	Bend	trans	-120.8	5.6	-169.9	-104.3	-26.8	0	0	0	116.2
33	A	56.2	Low	63.3	Low	57 Å²	57	104.2 Å²	104.2	47%	0.471	58%	0.581	S	S	.	*	S	Bend	trans	-90.7	123	172.9	0	0	0	0	0	110.4	A35	A33-A35 PolarHBondContact O-N 3.1Å
34	P	55.4	Low	64.5	Low	116 Å²	116	105.6 Å²	105.6	75%	0.753	58%	0.583	S	S	*	*			trans	-57.9	132.2	164.7	26.3	-30.8	0	0	0	106.7	N36	P34-N36 PolarHBondContact O-N 2.83Å
35	A	59.3	Low	66.1	Low	101 Å²	101	105.2 Å²	105.2	84%	0.835	58%	0.575	S	S	*	*			trans	-64.9	66.1	-172.5	0	0	0	0	0	112.5	A33 G37	A33-A35 PolarHBondContact O-N 3.1Å; A35-G37 PolarHBondContact O-N 2.57Å; A35-G37 VanDerWaalsContact O-N 3.16Å
36	N	62.2	Low	67.4	Low	103 Å²	103	106.4 Å²	106.4	55%	0.551	58%	0.582	S	S	*	*			trans	-76.4	99.8	162.1	-171.2	-9.3	0	0	0	105.6	P34 N38 A39	P34-N36 PolarHBondContact O-N 2.83Å; N36-N38 PolarHBondContact O-N 3.2Å; N36-N38 WeakPolarHBondContact OD1-CB 3.43Å; N36-N38 PolarHBondContact OD1-N 3.27Å; N36-A39 HydrophobicContact CB-CB 4.35Å; N36-A39 WeakPolarHBondContact O-CB 3.44Å; N36-A39 PolarHBondContact O-N 3.32Å
37	G	64.3	Low	68.5	Low	54 Å²	54	107 Å²	107	56%	0.557	58%	0.584	S	S	*	*	H	α-helix	trans	-51.9	-21.1	-178.1	0	0	0	0	0	113.7	A35 R41	A35-G37 PolarHBondContact O-N 2.57Å; A35-G37 VanDerWaalsContact O-N 3.16Å; G37-R41 VanDerWaalsContact O-CB 3.29Å; G37-R41 WeakPolarHBondContact O-CB 3.49Å; G37-R41 PolarHBondContact O-N 3Å
38	N	76.5	Confident	69.9	Low	79 Å²	79	108.4 Å²	108.4	42%	0.422	58%	0.578	S	S	.	*	H	α-helix	trans	-70.7	-38	172.3	-167.3	31.4	0	0	0	113.8	N36 R41 R42	N36-N38 PolarHBondContact O-N 3.2Å; N36-N38 WeakPolarHBondContact OD1-CB 3.43Å; N36-N38 PolarHBondContact OD1-N 3.27Å; N38-R41 PolarHBondContact OD1-NH2 3.49Å; N38-R42 WeakPolarHBondContact O-CB 3.4Å; N38-R42 PolarHBondContact O-N 2.92Å
39	A	74.9	Confident	71.4	Confident	51 Å²	51	108.6 Å²	108.6	42%	0.421	57%	0.572	S	S	.	*	H	α-helix	trans	-68.9	-42.2	-179.5	0	0	0	0	0	111.7	N36 R42 R43	N36-A39 HydrophobicContact CB-CB 4.35Å; N36-A39 WeakPolarHBondContact O-CB 3.44Å; N36-A39 PolarHBondContact O-N 3.32Å; A39-R42 PolarHBondContact O-N 3.42Å; A39-R43 WeakPolarHBondContact O-CB 3.44Å; A39-R43 PolarHBondContact O-N 3.24Å
40	V	76.7	Confident	72.4	Confident	81 Å²	81	110.1 Å²	110.1	49%	0.491	58%	0.576	S	S	.	*	H	α-helix	trans	-64.3	-47.9	175.5	178.5	0	0	0	0	110.6	R42 R43 M44	V40-R42 VanDerWaalsContact C-N 3.34Å; V40-R42 PolarHBondContact O-N 2.93Å; V40-R43 WeakPolarHBondContact O-CB 3.45Å; V40-R43 PolarHBondContact O-N 2.99Å; V40-M44 HydrophobicContact CG1-SD 4.21Å; V40-M44 WeakPolarHBondContact O-CG 3.49Å; V40-M44 PolarHBondContact O-N 3.15Å
41	R	80.4	Confident	73.8	Confident	160 Å²	160	110.5 Å²	110.5	60%	0.604	56%	0.561	S	S	*	*	H	α-helix	trans	-57.8	-45.3	177.3	-176.2	178.3	63.6	-162	-1.2	112.1	G37 N38 R43 M44 E45	G37-R41 VanDerWaalsContact O-CB 3.29Å; G37-R41 WeakPolarHBondContact O-CB 3.49Å; G37-R41 PolarHBondContact O-N 3Å; N38-R41 PolarHBondContact OD1-NH2 3.49Å; R41-R43 VanDerWaalsContact C-N 3.34Å; R41-R43 PolarHBondContact O-N 3.38Å; R41-M44 PolarHBondContact O-N 3.02Å; R41-E45 WeakPolarHBondContact O-CB 3.47Å; R41-E45 PolarHBondContact O-N 3.5Å
42	R	79.7	Confident	75.5	Confident	183 Å²	183	106.1 Å²	106.1	69%	0.691	55%	0.545	S	S	*	.	H	α-helix	trans	-65.1	-37.2	179.3	-160.2	175.7	78.9	171.2	4.5	112	N38 A39 V40 M46	N38-R42 WeakPolarHBondContact O-CB 3.4Å; N38-R42 PolarHBondContact O-N 2.92Å; A39-R42 PolarHBondContact O-N 3.42Å; V40-R42 VanDerWaalsContact C-N 3.34Å; V40-R42 PolarHBondContact O-N 2.93Å; R42-M46 WeakPolarHBondContact O-CB 3.49Å; R42-M46 PolarHBondContact O-N 3.29Å
43	R	79.8	Confident	76.9	Confident	104 Å²	104	105.1 Å²	105.1	39%	0.392	54%	0.539	S	S	.	.	H	α-helix	trans	-64.4	-48.3	174.6	-171.5	-174.4	-68.3	-121.2	3.8	111.4	E26 A39 V40 R41 E45 M46 K47	E26-R43 WeakPolarHBondContact OE1-CD 3.13Å; A39-R43 WeakPolarHBondContact O-CB 3.44Å; A39-R43 PolarHBondContact O-N 3.24Å; V40-R43 WeakPolarHBondContact O-CB 3.45Å; V40-R43 PolarHBondContact O-N 2.99Å; R41-R43 VanDerWaalsContact C-N 3.34Å; R41-R43 PolarHBondContact O-N 3.38Å; R43-E45 VanDerWaalsContact C-N 3.35Å; R43-E45 PolarHBondContact O-N 3.17Å; R43-M46 WeakPolarHBondContact O-CB 3.38Å; R43-M46 PolarHBondContact O-N 3.01Å; R43-K47 PolarHBondContact O-N 3.14Å
44	M	81.5	Confident	78.3	Confident	124 Å²	124	107.1 Å²	107.1	61%	0.611	54%	0.541	S	S	*	.	H	α-helix	trans	-62.3	-40.6	176.5	-66.7	-179.6	88.3	0	0	112.3	V40 R41 K47 M48	V40-M44 HydrophobicContact CG1-SD 4.21Å; V40-M44 WeakPolarHBondContact O-CG 3.49Å; V40-M44 PolarHBondContact O-N 3.15Å; R41-M44 PolarHBondContact O-N 3.02Å; M44-K47 PolarHBondContact O-N 3.4Å; M44-M48 WeakPolarHBondContact O-CG 3.39Å; M44-M48 PolarHBondContact O-N 3.33Å
45	E	86.4	Confident	79.8	Confident	83 Å²	83	109 Å²	109	39%	0.388	53%	0.533	S	S	.	.	H	α-helix	trans	-62.9	-42.8	176	-170.5	-169.8	163.5	0	0	111.7	R41 R43 K47 M48 R49	R41-E45 WeakPolarHBondContact O-CB 3.47Å; R41-E45 PolarHBondContact O-N 3.5Å; R43-E45 VanDerWaalsContact C-N 3.35Å; R43-E45 PolarHBondContact O-N 3.17Å; E45-K47 PolarHBondContact O-N 3.38Å; E45-M48 PolarHBondContact O-N 2.96Å; E45-R49 WeakPolarHBondContact O-CG 3.46Å; E45-R49 PolarHBondContact O-N 3.03Å; E45-R49 IonicContact OE1-CZ 3.1Å; E45-R49 VanDerWaalsContact OE1-CZ 3.25Å; E45-R49 IonicContact OE1-NE 2.57Å; E45-R49 PolarHBondContact OE1-NE 3.2Å; E45-R49 IonicContact OE1-NH2 3.25Å; E45-R49 PolarHBondContact OE1-NH2 3.05Å
46	M	84.3	Confident	81	Confident	139 Å²	139	108.3 Å²	108.3	69%	0.685	53%	0.527	S	S	*	.	H	α-helix	trans	-61.7	-43.8	177.3	-165.9	-177.5	-146.8	0	0	111.5	R42 R43 M48 R49 K50	R42-M46 WeakPolarHBondContact O-CB 3.49Å; R42-M46 PolarHBondContact O-N 3.29Å; R43-M46 WeakPolarHBondContact O-CB 3.38Å; R43-M46 PolarHBondContact O-N 3.01Å; M46-M48 PolarHBondContact O-N 3.45Å; M46-R49 PolarHBondContact O-N 3.47Å; M46-K50 PolarHBondContact O-N 3.21Å
47	K	79.8	Confident	82	Confident	76 Å²	76	107.9 Å²	107.9	33%	0.33	53%	0.532	S	S	.	.	H	α-helix	trans	-58.2	-46.3	173.5	-76.6	-172.8	149.7	-157.4	0	112.5	E26 R43 M44 E45 R49 K50 L51	E26-K47 WeakPolarHBondContact OE1-CD 3.17Å; E26-K47 WeakPolarHBondContact OE1-CE 2.94Å; E26-K47 IonicContact OE1-NZ 2.7Å; E26-K47 PolarHBondContact OE1-NZ 3.08Å; E26-K47 VanDerWaalsContact OE1-NZ 3.1Å; E26-K47 WeakPolarHBondContact OE2-CE 3.37Å; E26-K47 IonicContact OE2-NZ 3.96Å; E26-K47 PolarHBondContact OE2-NZ 3.37Å; R43-K47 PolarHBondContact O-N 3.14Å; M44-K47 PolarHBondContact O-N 3.4Å; E45-K47 PolarHBondContact O-N 3.38Å; K47-R49 VanDerWaalsContact C-N 3.32Å; K47-R49 PolarHBondContact O-N 3.26Å; K47-K50 PolarHBondContact O-N 2.91Å; K47-L51 WeakPolarHBondContact O-CB 3.32Å; K47-L51 PolarHBondContact O-N 3Å
48	M	84.4	Confident	82	Confident	113 Å²	113	111.2 Å²	111.2	56%	0.557	57%	0.566	S	S	*	*	H	α-helix	trans	-63.9	-35.2	176.8	-76.9	-67.3	-142.9	0	0	113	M44 E45 M46 R52	M44-M48 WeakPolarHBondContact O-CG 3.39Å; M44-M48 PolarHBondContact O-N 3.33Å; E45-M48 PolarHBondContact O-N 2.96Å; M46-M48 PolarHBondContact O-N 3.45Å; M48-R52 WeakPolarHBondContact O-CG 3.29Å; M48-R52 PolarHBondContact O-N 3.5Å; M48-R52 VanDerWaalsContact O-N 3.14Å; M48-R52 PolarHBondContact O-NE 3.24Å
49	R	87.3	Confident	82.3	Confident	142 Å²	142	112.8 Å²	112.8	54%	0.536	57%	0.574	S	S	.	*	H	α-helix	trans	-67.2	-45.8	173.6	-73.4	174.4	179.6	-141.6	3.1	111.2	E45 M46 K47 R52 L53	E45-R49 WeakPolarHBondContact O-CG 3.46Å; E45-R49 PolarHBondContact O-N 3.03Å; E45-R49 IonicContact OE1-CZ 3.1Å; E45-R49 VanDerWaalsContact OE1-CZ 3.25Å; E45-R49 IonicContact OE1-NE 2.57Å; E45-R49 PolarHBondContact OE1-NE 3.2Å; E45-R49 IonicContact OE1-NH2 3.25Å; E45-R49 PolarHBondContact OE1-NH2 3.05Å; M46-R49 PolarHBondContact O-N 3.47Å; K47-R49 VanDerWaalsContact C-N 3.32Å; K47-R49 PolarHBondContact O-N 3.26Å; R49-R52 WeakPolarHBondContact O-CB 3.44Å; R49-R52 PolarHBondContact O-N 3.34Å; R49-L53 WeakPolarHBondContact O-CG 3.45Å; R49-L53 PolarHBondContact O-N 2.64Å
50	K	81.9	Confident	82.7	Confident	94 Å²	94	116.1 Å²	116.1	41%	0.409	58%	0.582	S	S	.	*	H	α-helix	trans	-61.6	-44.7	178.5	-169.8	173.7	176.2	178.6	0	112	E22 M46 K47 R52 L53 L54	E22-K50 IonicContact OE1-NZ 2.59Å; E22-K50 IonicContact OE2-NZ 3.06Å; E22-K50 PolarHBondContact OE2-NZ 3.44Å; M46-K50 PolarHBondContact O-N 3.21Å; K47-K50 PolarHBondContact O-N 2.91Å; K50-R52 VanDerWaalsContact C-N 3.3Å; K50-R52 PolarHBondContact O-N 3.06Å; K50-L53 PolarHBondContact O-N 2.89Å; K50-L54 PolarHBondContact O-N 2.79Å
51	L	85	Confident	83	Confident	78 Å²	78	118 Å²	118	41%	0.408	59%	0.587	S	S	.	*	H	α-helix	trans	-62.2	-34.9	174.7	-179.4	62.6	0	0	0	112.8	K47 R55	K47-L51 WeakPolarHBondContact O-CB 3.32Å; K47-L51 PolarHBondContact O-N 3Å; L51-R55 WeakPolarHBondContact O-CG 3.39Å; L51-R55 PolarHBondContact O-N 3.48Å; L51-R55 PolarHBondContact O-NE 3.27Å
52	R	90.5	Very high	83.1	Confident	142 Å²	142	115.5 Å²	115.5	54%	0.536	59%	0.586	S	S	.	*	H	α-helix	trans	-68.7	-43.3	174.5	-82.3	-175.5	-72.1	-178.9	-1.9	112.2	M48 R49 K50 L54 R55 A56	M48-R52 WeakPolarHBondContact O-CG 3.29Å; M48-R52 PolarHBondContact O-N 3.5Å; M48-R52 VanDerWaalsContact O-N 3.14Å; M48-R52 PolarHBondContact O-NE 3.24Å; R49-R52 WeakPolarHBondContact O-CB 3.44Å; R49-R52 PolarHBondContact O-N 3.34Å; K50-R52 VanDerWaalsContact C-N 3.3Å; K50-R52 PolarHBondContact O-N 3.06Å; R52-L54 VanDerWaalsContact C-N 3.33Å; R52-L54 PolarHBondContact O-N 3.2Å; R52-R55 PolarHBondContact O-N 3.38Å; R52-A56 WeakPolarHBondContact O-CB 3.5Å; R52-A56 PolarHBondContact O-N 2.98Å
53	L	89.3	Confident	83.4	Confident	127 Å²	127	111.3 Å²	111.3	67%	0.665	58%	0.579	S	S	*	*	H	α-helix	trans	-61.4	-43.9	177	-69.9	170.4	0	0	0	111.2	R49 K50 R55 A56 S57	R49-L53 WeakPolarHBondContact O-CG 3.45Å; R49-L53 PolarHBondContact O-N 2.64Å; K50-L53 PolarHBondContact O-N 2.89Å; L53-R55 VanDerWaalsContact C-N 3.33Å; L53-R55 PolarHBondContact O-N 3.48Å; L53-A56 PolarHBondContact O-N 2.9Å; L53-A56 VanDerWaalsContact O-N 3.15Å; L53-S57 PolarHBondContact O-N 2.7Å; L53-S57 VanDerWaalsContact O-N 3.08Å; L53-S57 PolarHBondContact O-OG 3.43Å; L53-S57 VanDerWaalsContact O-OG 3.08Å
54	L	84	Confident	83.6	Confident	100 Å²	100	111.8 Å²	111.8	52%	0.524	59%	0.591	S	S	.	*	H	α-helix	trans	-60	-42.2	178	-174.1	65.2	0	0	0	112.3	K50 R52 A56 S57	K50-L54 PolarHBondContact O-N 2.79Å; R52-L54 VanDerWaalsContact C-N 3.33Å; R52-L54 PolarHBondContact O-N 3.2Å; L54-A56 VanDerWaalsContact C-N 3.34Å; L54-S57 PolarHBondContact O-N 3.16Å; L54-S57 PolarHBondContact O-OG 2.81Å; L54-S57 VanDerWaalsContact O-OG 3.06Å
55	R	87.1	Confident	83.7	Confident	156 Å²	156	110.9 Å²	110.9	59%	0.589	59%	0.59	S	S	*	*	H	α-helix	trans	-71.3	-25.1	176.8	-74.4	-175.4	-69.4	-163.2	0.3	114.1	L51 R52 L53	L51-R55 WeakPolarHBondContact O-CG 3.39Å; L51-R55 PolarHBondContact O-N 3.48Å; L51-R55 PolarHBondContact O-NE 3.27Å; R52-R55 PolarHBondContact O-N 3.38Å; L53-R55 VanDerWaalsContact C-N 3.33Å; L53-R55 PolarHBondContact O-N 3.48Å
56	A	84.9	Confident	83.5	Confident	85 Å²	85	113.1 Å²	113.1	70%	0.702	61%	0.606	S	S	*	*	H	α-helix	trans	-85.4	-17.9	178.3	0	0	0	0	0	112.6	R52 L53 L54	R52-A56 WeakPolarHBondContact O-CB 3.5Å; R52-A56 PolarHBondContact O-N 2.98Å; L53-A56 PolarHBondContact O-N 2.9Å; L53-A56 VanDerWaalsContact O-N 3.15Å; L54-A56 VanDerWaalsContact C-N 3.34Å
57	S	84.3	Confident	83.5	Confident	95 Å²	95	110.9 Å²	110.9	66%	0.664	60%	0.599	S	S	*	*			trans	-98	3.6	-179.1	60.1	0	0	0	0	114.6	L53 L54	L53-S57 PolarHBondContact O-N 2.7Å; L53-S57 VanDerWaalsContact O-N 3.08Å; L53-S57 PolarHBondContact O-OG 3.43Å; L53-S57 VanDerWaalsContact O-OG 3.08Å; L54-S57 PolarHBondContact O-N 3.16Å; L54-S57 PolarHBondContact O-OG 2.81Å; L54-S57 VanDerWaalsContact O-OG 3.06Å
58	G	63.3	Low	83.8	Confident	123 Å²	123	114.1 Å²	114.1	100%	1.268	62%	0.623	S	S	*	*			trans	-116.3	0	175.1	0	0	0	0	0	110.7

Retrieved 58 of 58 residues in 21.9 ms (Link to these results)

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