A0A087WQ09_MOUSE Loading...

PDZ domain containing 2

AlphaFold DB , UniProt , Accession A0A087WQ09, Species MOUSE (Mus musculus, Mouse), Gene Pdzd2, Length 49 aa.

						>A0A087WQ09_MOUSE|A0A087WQ09|Pdzd2
MLRRFKQKAHLTYNGNSGNSSEPGETPTLELGDQTSKKGKRTRKFGVIS
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	74.3	Confident	71.6	Confident	244 Å²	244	188 Å²	188	100%	1.202	87%	0.872	S	S	*	*				0	125.2	0	-63.4	-174.8	-68.2	0	0	108.7
2	L	71.9	Confident	70.4	Confident	175 Å²	175	183 Å²	183	92%	0.916	86%	0.864	S	S	*	*	P	Polyproline II helix	trans	-82.3	140.1	-173	-170.5	64.4	0	0	0	111.4
3	R	76.9	Confident	69.4	Low	236 Å²	236	185.5 Å²	185.5	89%	0.891	86%	0.863	S	S	*	*	P	Polyproline II helix	trans	-82.8	129.3	174.7	-71.6	-172.2	-83.3	-123.8	1.3	109.8
4	R	81.4	Confident	68.4	Low	245 Å²	245	181.9 Å²	181.9	93%	0.925	85%	0.853	S	S	*	*	P	Polyproline II helix	trans	-77	130.1	-179.7	-60.6	-170.3	-172.7	-164	2.9	110
5	F	77.5	Confident	67.5	Low	204 Å²	204	174.3 Å²	174.3	90%	0.895	84%	0.843	S	S	*	*	P	Polyproline II helix	trans	-72.6	131.9	170	-127.1	-93.2	0	0	0	108.9	Q7	F5-Q7 PolarHBondContact O-N 2.74Å
6	K	74.1	Confident	66.3	Low	188 Å²	188	173.6 Å²	173.6	82%	0.817	84%	0.844	S	S	*	*			trans	-75.1	101.4	176	-148.6	-158.1	-173.6	-155.4	0	107.8	K8	K6-K8 PolarHBondContact O-N 3.01Å
7	Q	69.4	Low	66.3	Low	179 Å²	179	170.1 Å²	170.1	84%	0.836	84%	0.842	S	S	*	*			trans	-63.7	109.1	176.1	-158	169.8	4.6	0	0	108	F5 A9	F5-Q7 PolarHBondContact O-N 2.74Å; Q7-A9 PolarHBondContact O-N 2.64Å
8	K	67.3	Low	65.5	Low	182 Å²	182	164.6 Å²	164.6	79%	0.791	84%	0.836	S	S	*	*			trans	-80.1	94	164.5	-71	-168	177	-176	0	105.9	K6 H10	K6-K8 PolarHBondContact O-N 3.01Å; K8-H10 PolarHBondContact O-N 2.73Å; K8-H10 VanDerWaalsContact O-N 3.07Å
9	A	64	Low	65.3	Low	80 Å²	80	164.4 Å²	164.4	66%	0.661	84%	0.837	S	S	*	*			trans	-62.2	110	166.8	0	0	0	0	0	106.6	Q7 L11	Q7-A9 PolarHBondContact O-N 2.64Å; A9-L11 VanDerWaalsContact C-N 3.29Å; A9-L11 PolarHBondContact O-N 3.01Å
10	H	65.3	Low	65.1	Low	166 Å²	166	162.1 Å²	162.1	77%	0.769	84%	0.837	S	S	*	*			trans	-63.8	105	158.5	-72	-89.6	0	0	0	104.8	K8 T12	K8-H10 PolarHBondContact O-N 2.73Å; K8-H10 VanDerWaalsContact O-N 3.07Å; H10-T12 PolarHBondContact O-N 2.86Å
11	L	65	Low	64.9	Low	169 Å²	169	159 Å²	159	89%	0.885	83%	0.829	S	S	*	*			trans	-61.1	92	167	-78.6	163	0	0	0	106.1	A9 Y13	A9-L11 VanDerWaalsContact C-N 3.29Å; A9-L11 PolarHBondContact O-N 3.01Å; L11-Y13 PolarHBondContact O-N 3.44Å; L11-Y13 VanDerWaalsContact O-N 3.09Å
12	T	57.4	Low	63.9	Low	128 Å²	128	155.4 Å²	155.4	79%	0.785	81%	0.81	S	S	*	*			trans	-74.8	100	170	47.9	0	0	0	0	106.6	H10 N14	H10-T12 PolarHBondContact O-N 2.86Å; T12-N14 PolarHBondContact O-N 2.83Å
13	Y	57.6	Low	63.6	Low	215 Å²	215	153.3 Å²	153.3	84%	0.843	81%	0.806	S	S	*	*			trans	-58.9	105.8	168	175.2	-97.8	0	0	0	109.2	L11	L11-Y13 PolarHBondContact O-N 3.44Å; L11-Y13 VanDerWaalsContact O-N 3.09Å
14	N	55.2	Low	62.6	Low	135 Å²	135	145.6 Å²	145.6	72%	0.722	80%	0.8	S	S	*	*			trans	64.2	128.9	143.3	-140.7	8.8	0	0	0	121.1	T12	T12-N14 PolarHBondContact O-N 2.83Å
15	G	54.6	Low	61.2	Low	68 Å²	68	143 Å²	143	70%	0.701	80%	0.799	S	S	*	*			trans	102.5	89.5	138	0	0	0	0	0	118
16	N	49.2	Very low	60.4	Low	163 Å²	163	139 Å²	139	87%	0.872	79%	0.791	S	S	*	*				-170.8	129.6	114.1	-153.7	25.7	0	0	0	111.3
17	S	66.3	Low	59.6	Low	114 Å²	114	135.7 Å²	135.7	80%	0.797	79%	0.789	S	S	*	*			trans	-81.2	126	169.8	53.5	0	0	0	0	110.2
18	G	51.3	Low	58.8	Low	72 Å²	72	131.9 Å²	131.9	74%	0.742	78%	0.778	S	S	*	*			trans	-176.6	110.9	172.8	0	0	0	0	0	111.5
19	N	62.7	Low	58.5	Low	160 Å²	160	130.8 Å²	130.8	86%	0.856	78%	0.78	S	S	*	*			trans	-81.2	152.2	175.5	43.3	-27.6	0	0	0	112
20	S	61.4	Low	58.2	Low	119 Å²	119	134.2 Å²	134.2	83%	0.832	78%	0.782	S	S	*	*			trans	112.8	148.2	152.1	-165.6	0	0	0	0	119.5
21	S	59.2	Low	57.9	Low	96 Å²	96	134.9 Å²	134.9	67%	0.671	79%	0.79	S	S	*	*			trans	80.9	125.2	170.8	-102.9	0	0	0	0	117
22	E	54.9	Low	57.8	Low	170 Å²	170	129.1 Å²	129.1	79%	0.794	77%	0.772	S	S	*	*			cis	-162.6	159.1	-3.5	-110.1	152.5	142.9	0	0	105.7
23	P	64.1	Low	58.1	Low	131 Å²	131	130.4 Å²	130.4	85%	0.851	77%	0.774	S	S	*	*			trans	-86.8	128.6	176.2	33.8	-26.7	0	0	0	110.3
24	G	56	Low	58	Low	74 Å²	74	128.6 Å²	128.6	76%	0.763	77%	0.773	S	S	*	*			trans	117.1	83.2	159	0	0	0	0	0	114.5
25	E	53.4	Low	58.3	Low	191 Å²	191	128.6 Å²	128.6	89%	0.893	78%	0.778	S	S	*	*			trans	-117.6	105.4	146.9	-63.2	-173.5	-153.5	0	0	105.7
26	T	59	Low	58.6	Low	119 Å²	119	128.9 Å²	128.9	73%	0.73	77%	0.77	S	S	*	*			trans	-43.1	135	164.8	44.3	0	0	0	0	108.1	T28	T26-T28 VanDerWaalsContact C-N 3.31Å; T26-T28 PolarHBondContact O-N 2.72Å
27	P	57.5	Low	59.6	Low	118 Å²	118	130.9 Å²	130.9	77%	0.766	77%	0.771	S	S	*	*			trans	-60.2	105.6	171	25.9	-31.2	0	0	0	105.9	L29	P27-L29 VanDerWaalsContact C-N 3.35Å; P27-L29 PolarHBondContact O-N 2.86Å
28	T	53.7	Low	59.8	Low	100 Å²	100	133.9 Å²	133.9	61%	0.613	77%	0.769	S	S	*	*			trans	-50.6	111	166.2	-55.6	0	0	0	0	104.2	T26 E30	T26-T28 VanDerWaalsContact C-N 3.31Å; T26-T28 PolarHBondContact O-N 2.72Å; T28-E30 HydrophobicContact CG2-CG 4.14Å; T28-E30 PolarHBondContact O-N 2.75Å; T28-E30 WeakPolarHBondContact CG2-OE1 3.24Å; T28-E30 VanDerWaalsContact CG2-OE1 3.24Å
29	L	60.6	Low	61	Low	158 Å²	158	133.6 Å²	133.6	83%	0.827	77%	0.767	S	S	*	*			trans	-66.5	80.5	167.9	-78.3	170.3	0	0	0	104.5	P27 L31	P27-L29 VanDerWaalsContact C-N 3.35Å; P27-L29 PolarHBondContact O-N 2.86Å; L29-L31 PolarHBondContact O-N 2.88Å
30	E	57.3	Low	61.7	Low	153 Å²	153	135.8 Å²	135.8	72%	0.715	77%	0.768	S	S	*	*			trans	-59.5	89.8	163.6	-71.9	-63.7	150.9	0	0	104.8	T28 G32	T28-E30 HydrophobicContact CG2-CG 4.14Å; T28-E30 PolarHBondContact O-N 2.75Å; T28-E30 WeakPolarHBondContact CG2-OE1 3.24Å; T28-E30 VanDerWaalsContact CG2-OE1 3.24Å; E30-G32 PolarHBondContact O-N 3.06Å
31	L	58.8	Low	62.8	Low	179 Å²	179	141.7 Å²	141.7	94%	0.937	77%	0.772	S	S	*	*			trans	-72.6	51.7	174	-166.6	86.5	0	0	0	107.8	L29	L29-L31 PolarHBondContact O-N 2.88Å
32	G	63.7	Low	63.8	Low	48 Å²	48	142.6 Å²	142.6	50%	0.495	77%	0.774	S	S	.	*			trans	-139.4	102.5	-167.5	0	0	0	0	0	109.8	E30	E30-G32 PolarHBondContact O-N 3.06Å
33	D	63.3	Low	65.4	Low	155 Å²	155	142.9 Å²	142.9	83%	0.829	77%	0.768	S	S	*	*			trans	63.3	71.4	156.4	-63.1	-20.5	0	0	0	118.3
34	Q	55.2	Low	66.6	Low	178 Å²	178	146 Å²	146	83%	0.832	77%	0.768	S	S	*	*				-142	85.1	125.1	-74.3	-160.8	21.5	0	0	109.7	S36	Q34-S36 PolarHBondContact O-N 3.09Å
35	T	62.1	Low	68.1	Low	134 Å²	134	150.2 Å²	150.2	82%	0.822	77%	0.766	S	S	*	*			trans	-62	73.1	137.1	57.5	0	0	0	0	107	K37	T35-K37 PolarHBondContact O-N 2.82Å
36	S	60.4	Low	69.9	Low	75 Å²	75	144.4 Å²	144.4	52%	0.524	76%	0.757	S	S	.	*			trans	-48.2	119.3	159.2	170.6	0	0	0	0	103.5	Q34 K38	Q34-S36 PolarHBondContact O-N 3.09Å; S36-K38 PolarHBondContact O-N 3.06Å; S36-K38 PolarHBondContact OG-N 2.99Å
37	K	70.3	Confident	71.2	Confident	205 Å²	205	145.7 Å²	145.7	89%	0.891	76%	0.764	S	S	*	*			trans	-66.5	68.3	162.5	-68.7	-171.9	-178.9	177.9	0	106	T35 G39	T35-K37 PolarHBondContact O-N 2.82Å; K37-G39 VanDerWaalsContact C-N 3.35Å; K37-G39 PolarHBondContact O-N 3.22Å
38	K	70.4	Confident	72.4	Confident	176 Å²	176	148.2 Å²	148.2	77%	0.765	77%	0.77	S	S	*	*			trans	-56.6	105.5	172.8	180	174.6	-175.1	-112.7	0	103.3	S36 K40	S36-K38 PolarHBondContact O-N 3.06Å; S36-K38 PolarHBondContact OG-N 2.99Å; K38-K40 PolarHBondContact O-N 3.07Å
39	G	76.3	Confident	73.8	Confident	67 Å²	67	152 Å²	152	69%	0.691	80%	0.801	S	S	*	*			trans	-42	116.8	-167.7	0	0	0	0	0	110	K37 R41	K37-G39 VanDerWaalsContact C-N 3.35Å; K37-G39 PolarHBondContact O-N 3.22Å; G39-R41 VanDerWaalsContact C-N 3.25Å; G39-R41 PolarHBondContact O-N 3.05Å
40	K	79.3	Confident	74.5	Confident	206 Å²	206	151.8 Å²	151.8	90%	0.896	80%	0.799	S	S	*	*			trans	-72.9	87.7	179.5	-68.4	-108.5	-174.3	173.1	0	107.1	K38	K38-K40 PolarHBondContact O-N 3.07Å
41	R	82.5	Confident	75.4	Confident	242 Å²	242	151.7 Å²	151.7	91%	0.913	80%	0.804	S	S	*	*			trans	-92.6	102.2	172.9	-157.3	172.4	-174.7	167	1	108.4	G39	G39-R41 VanDerWaalsContact C-N 3.25Å; G39-R41 PolarHBondContact O-N 3.05Å
42	T	81.9	Confident	76.3	Confident	115 Å²	115	150.2 Å²	150.2	71%	0.706	80%	0.796	S	S	*	*	P	Polyproline II helix	trans	-84.7	128.1	177.6	-59.7	0	0	0	0	110
43	R	87.6	Confident	77	Confident	177 Å²	177	156.2 Å²	156.2	67%	0.668	81%	0.814	S	S	*	*	P	Polyproline II helix	trans	-71	138.3	175.2	-69.4	171	54.9	-118.6	-5.9	109.8
44	K	89.9	Confident	77.9	Confident	196 Å²	196	156.3 Å²	156.3	85%	0.852	81%	0.813	S	S	*	*	P	Polyproline II helix	trans	-95.2	122.4	171.5	-62	-65.2	-173.9	174.4	0	108.1
45	F	87.5	Confident	79.4	Confident	163 Å²	163	154.8 Å²	154.8	72%	0.715	81%	0.812	S	S	*	*	P	Polyproline II helix	trans	-99	126.7	167.6	-67.2	-89.8	0	0	0	107.5
46	G	91.7	Very high	80.7	Confident	69 Å²	69	156.3 Å²	156.3	71%	0.711	81%	0.811	S	S	*	*	P	Polyproline II helix	trans	-100.1	154.8	168.4	0	0	0	0	0	110.2
47	V	85.6	Confident	82.2	Confident	146 Å²	146	162.5 Å²	162.5	89%	0.885	83%	0.833	S	S	*	*	P	Polyproline II helix	trans	-77.7	129.2	166.8	180	0	0	0	0	107.5
48	I	83.1	Confident	83.2	Confident	170 Å²	170	159 Å²	159	87%	0.872	83%	0.828	S	S	*	*	P	Polyproline II helix	trans	-102.6	116.3	173.1	-56	173.6	0	0	0	105.9
49	S	82.8	Confident	84.4	Confident	181 Å²	181	157.5 Å²	157.5	100%	1.266	83%	0.834	S	S	*	*			trans	-109.9	0	178.4	62.5	0	0	0	0	111.2

Retrieved 49 of 49 residues in 38 ms (Link to these results)

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