A0A087WQ67_MOUSE Loading...

Protein tyrosine phosphatase receptor type N

AlphaFold DB , UniProt , Accession A0A087WQ67, Species MOUSE (Mus musculus, Mouse), Gene Ptprn, Length 62 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M39.2Very low67.1Low206 Ų206130 Ų130100%1.01571%0.711SS**  0104.60-58-177.384.900106.9Q3M1-Q3 VanDerWaalsContact C-N 3.28Å; M1-Q3 PolarHBondContact O-N 3.05Å; M1-Q3 VanDerWaalsContact O-N 3.11Å
2S58.5Low68.8Low130 Ų130125 Ų12591%0.90969%0.687SS**  trans-84.782.1176.7-54.50000107.4G4S2-G4 PolarHBondContact O-N 3.08Å
3Q60.9Low70.2Confident155 Ų155120.5 Ų120.572%0.72466%0.658SS**  trans-57.1108.1169.6-25.1-85.7-2.300105M1 L5M1-Q3 VanDerWaalsContact C-N 3.28Å; M1-Q3 PolarHBondContact O-N 3.05Å; M1-Q3 VanDerWaalsContact O-N 3.11Å; Q3-L5 PolarHBondContact O-N 3.07Å
4G61.3Low71.7Confident67 Ų67119.4 Ų119.469%0.69165%0.646SS**  trans-54.6132.1-179.100000109.2S2 S6S2-G4 PolarHBondContact O-N 3.08Å; G4-S6 PolarHBondContact O-N 2.64Å
5L60.7Low73Confident160 Ų160116.9 Ų116.984%0.83864%0.636SS**  trans-46.5112.8171.7-60.9167.9000107.5Q3 W7Q3-L5 PolarHBondContact O-N 3.07Å; L5-W7 PolarHBondContact O-N 2.94Å
6S65.8Low74.1Confident116 Ų116114.8 Ų114.881%0.81162%0.623SS**  trans-67.878.4170.553.20000107.4G4 H8G4-S6 PolarHBondContact O-N 2.64Å; S6-H8 PolarHBondContact O-N 2.7Å; S6-H8 VanDerWaalsContact O-N 3.15Å
7W63.1Low75.1Confident167 Ų167111.8 Ų111.863%0.63361%0.613SS**  trans-71-1.8-179.365.6-90.9000112.6L5 D9 Q13L5-W7 PolarHBondContact O-N 2.94Å; W7-D9 VanDerWaalsContact C-N 3.27Å; W7-D9 PolarHBondContact O-N 2.91Å; W7-D9 VanDerWaalsContact O-N 3.12Å; W7-Q13 HydrophobicContact CE3-CG 4.41Å; W7-Q13 HydrophobicContact CZ3-CG 4.38Å; W7-Q13 VanDerWaalsContact CZ3-NE2 3.29Å
8H69.8Low76.1Confident119 Ų119111.3 Ų111.355%0.55161%0.605SS**  trans-91.454.6-171.7-146.6-66.6000111.8S6 D10S6-H8 PolarHBondContact O-N 2.7Å; S6-H8 VanDerWaalsContact O-N 3.15Å; H8-D10 IonicContact CE1-OD1 3.11Å; H8-D10 PolarHBondContact CE1-OD1 3.42Å; H8-D10 IonicContact ND1-OD1 3.27Å; H8-D10 PolarHBondContact ND1-OD1 3.35Å
9D86.1Confident77Confident79 Ų79111.3 Ų111.342%0.42260%0.601SS.*  trans-89105.9162.2-179.669.5000107.9W7 L11 T12 Q13W7-D9 VanDerWaalsContact C-N 3.27Å; W7-D9 PolarHBondContact O-N 2.91Å; W7-D9 VanDerWaalsContact O-N 3.12Å; D9-L11 PolarHBondContact O-N 3.41Å; D9-T12 PolarHBondContact O-N 2.76Å; D9-T12 VanDerWaalsContact O-N 3.15Å; D9-T12 WeakPolarHBondContact OD2-CB 3.24Å; D9-T12 PolarHBondContact OD2-N 2.79Å; D9-T12 PolarHBondContact OD2-OG1 3.24Å; D9-Q13 WeakPolarHBondContact O-CG 3.45Å; D9-Q13 PolarHBondContact O-N 3.5Å
10D85.2Confident77.7Confident112 Ų112111.7 Ų111.760%0.59960%0.6SS**Hα-helixtrans-60.1-30.6-174-65.5-54.5000112.2H8 H14H8-D10 IonicContact CE1-OD1 3.11Å; H8-D10 PolarHBondContact CE1-OD1 3.42Å; H8-D10 IonicContact ND1-OD1 3.27Å; H8-D10 PolarHBondContact ND1-OD1 3.35Å; D10-H14 VanDerWaalsContact O-CB 3.28Å; D10-H14 WeakPolarHBondContact O-CB 3.44Å; D10-H14 PolarHBondContact O-N 2.94Å
11L87.6Confident78.2Confident119 Ų119114 Ų11462%0.62361%0.607SS**Hα-helixtrans-68.1-48.8176.5178.961.3000111.3D9 Q13 H14 V15D9-L11 PolarHBondContact O-N 3.41Å; L11-Q13 VanDerWaalsContact C-N 3.32Å; L11-Q13 PolarHBondContact O-N 3.13Å; L11-H14 WeakPolarHBondContact O-CB 3.19Å; L11-H14 PolarHBondContact O-N 3.34Å; L11-V15 HydrophobicContact CD1-CG2 4.41Å; L11-V15 WeakPolarHBondContact O-CG2 3.22Å; L11-V15 PolarHBondContact O-N 3.22Å
12T87.1Confident80.5Confident70 Ų70113.6 Ų113.643%0.42959%0.594SS.*Hα-helixtrans-60.6-43.5176.5-63.30000110.8D9 H14 V15 I16D9-T12 PolarHBondContact O-N 2.76Å; D9-T12 VanDerWaalsContact O-N 3.15Å; D9-T12 WeakPolarHBondContact OD2-CB 3.24Å; D9-T12 PolarHBondContact OD2-N 2.79Å; D9-T12 PolarHBondContact OD2-OG1 3.24Å; T12-H14 VanDerWaalsContact C-N 3.31Å; T12-H14 PolarHBondContact O-N 2.98Å; T12-V15 PolarHBondContact O-N 3.41Å; T12-I16 HydrophobicContact CG2-CD1 3.61Å; T12-I16 HydrophobicContact CG2-CG1 4.32Å; T12-I16 WeakPolarHBondContact O-CB 3.36Å; T12-I16 VanDerWaalsContact O-CG1 3.22Å; T12-I16 WeakPolarHBondContact O-CG1 3.22Å; T12-I16 PolarHBondContact O-N 2.86Å
13Q87.6Confident81.9Confident66 Ų66111.7 Ų111.731%0.30857%0.573SS.*Hα-helixtrans-62.9-38.4176.6-68.8-63.990.500112.2W7 D9 L11 S17W7-Q13 HydrophobicContact CE3-CG 4.41Å; W7-Q13 HydrophobicContact CZ3-CG 4.38Å; W7-Q13 VanDerWaalsContact CZ3-NE2 3.29Å; D9-Q13 WeakPolarHBondContact O-CG 3.45Å; D9-Q13 PolarHBondContact O-N 3.5Å; L11-Q13 VanDerWaalsContact C-N 3.32Å; L11-Q13 PolarHBondContact O-N 3.13Å; Q13-S17 VanDerWaalsContact O-CB 3.29Å; Q13-S17 WeakPolarHBondContact O-CB 3.31Å; Q13-S17 PolarHBondContact O-N 3.31Å; Q13-S17 PolarHBondContact O-OG 3.43Å
14H90.7Very high83Confident105 Ų105109.6 Ų109.649%0.48657%0.573SS.*Hα-helixtrans-66.4-45176179.870.5000112.2D10 L11 T12 S17 Q18D10-H14 VanDerWaalsContact O-CB 3.28Å; D10-H14 WeakPolarHBondContact O-CB 3.44Å; D10-H14 PolarHBondContact O-N 2.94Å; L11-H14 WeakPolarHBondContact O-CB 3.19Å; L11-H14 PolarHBondContact O-N 3.34Å; T12-H14 VanDerWaalsContact C-N 3.31Å; T12-H14 PolarHBondContact O-N 2.98Å; H14-S17 PolarHBondContact O-N 2.89Å; H14-Q18 PolarHBondContact NE2-NE2 3.41Å; H14-Q18 PolarHBondContact O-N 2.88Å
15V92.3Very high84Confident83 Ų83117.7 Ų117.750%0.50358%0.582SS.*Hα-helixtrans-63.2-44.6177172.10000111L11 T12 S17 Q18 E19L11-V15 HydrophobicContact CD1-CG2 4.41Å; L11-V15 WeakPolarHBondContact O-CG2 3.22Å; L11-V15 PolarHBondContact O-N 3.22Å; T12-V15 PolarHBondContact O-N 3.41Å; V15-S17 VanDerWaalsContact C-N 3.35Å; V15-S17 PolarHBondContact O-N 3.28Å; V15-Q18 PolarHBondContact O-N 3.48Å; V15-E19 WeakPolarHBondContact O-CB 3.41Å; V15-E19 PolarHBondContact O-N 3.46Å
16I90.4Very high84.8Confident83 Ų83117.8 Ų117.843%0.42658%0.583SS.*Hα-helixtrans-62.6-44176.3-68.5167.8000110.2T12 Q18 E19 M20T12-I16 HydrophobicContact CG2-CD1 3.61Å; T12-I16 HydrophobicContact CG2-CG1 4.32Å; T12-I16 WeakPolarHBondContact O-CB 3.36Å; T12-I16 VanDerWaalsContact O-CG1 3.22Å; T12-I16 WeakPolarHBondContact O-CG1 3.22Å; T12-I16 PolarHBondContact O-N 2.86Å; I16-Q18 PolarHBondContact O-N 2.97Å; I16-E19 PolarHBondContact O-N 2.93Å; I16-M20 HydrophobicContact CG2-CG 4.23Å; I16-M20 WeakPolarHBondContact O-CG 3.48Å; I16-M20 PolarHBondContact O-N 2.95Å
17S89.8Confident85.3Confident64 Ų64123.3 Ų123.345%0.44859%0.586SS.*Hα-helixtrans-59.4-48.4178.6-60.90000111.6Q13 H14 V15 E19 M20 E21Q13-S17 VanDerWaalsContact O-CB 3.29Å; Q13-S17 WeakPolarHBondContact O-CB 3.31Å; Q13-S17 PolarHBondContact O-N 3.31Å; Q13-S17 PolarHBondContact O-OG 3.43Å; H14-S17 PolarHBondContact O-N 2.89Å; V15-S17 VanDerWaalsContact C-N 3.35Å; V15-S17 PolarHBondContact O-N 3.28Å; S17-E19 VanDerWaalsContact C-N 3.32Å; S17-E19 PolarHBondContact O-N 3.2Å; S17-M20 PolarHBondContact O-N 2.69Å; S17-E21 WeakPolarHBondContact O-CG 3.28Å; S17-E21 PolarHBondContact O-N 2.91Å
18Q93.4Very high86Confident103 Ų103120.7 Ų120.748%0.48159%0.591SS.*Hα-helixtrans-60.7-40.7176.5-76.5-156.965.400112.4H14 V15 I16 E21H14-Q18 PolarHBondContact NE2-NE2 3.41Å; H14-Q18 PolarHBondContact O-N 2.88Å; V15-Q18 PolarHBondContact O-N 3.48Å; I16-Q18 PolarHBondContact O-N 2.97Å; Q18-E21 PolarHBondContact O-N 3.32Å
19E92.8Very high86Confident111 Ų111120.5 Ų120.552%0.51960%0.6SS.*Hα-helixtrans-66.4-39.6179.5-172.362.9-174.600111.7V15 I16 S17 E21 R22V15-E19 WeakPolarHBondContact O-CB 3.41Å; V15-E19 PolarHBondContact O-N 3.46Å; I16-E19 PolarHBondContact O-N 2.93Å; S17-E19 VanDerWaalsContact C-N 3.32Å; S17-E19 PolarHBondContact O-N 3.2Å; E19-E21 VanDerWaalsContact C-N 3.27Å; E19-E21 PolarHBondContact O-N 2.61Å; E19-R22 PolarHBondContact O-N 2.79Å; E19-R22 VanDerWaalsContact O-N 3.13Å
20M91.1Very high85.6Confident118 Ų118124.3 Ų124.358%0.58162%0.615SS**Hα-helixtrans-64.4-30.6177.5-69.6-60-61.200113I16 S17 R22 I23I16-M20 HydrophobicContact CG2-CG 4.23Å; I16-M20 WeakPolarHBondContact O-CG 3.48Å; I16-M20 PolarHBondContact O-N 2.95Å; S17-M20 PolarHBondContact O-N 2.69Å; M20-R22 PolarHBondContact O-N 3.15Å; M20-I23 HydrophobicContact CE-CD1 3.79Å; M20-I23 PolarHBondContact O-N 2.84Å; M20-I23 HydrophobicContact SD-CD1 3.54Å; M20-I23 VanDerWaalsContact SD-CD1 3.54Å
21E88Confident85.1Confident161 Ų161124.8 Ų124.875%0.75262%0.624SS**Hα-helixtrans-68.3-24.4176-69.4-178.7102.800113S17 Q18 E19S17-E21 WeakPolarHBondContact O-CG 3.28Å; S17-E21 PolarHBondContact O-N 2.91Å; Q18-E21 PolarHBondContact O-N 3.32Å; E19-E21 VanDerWaalsContact C-N 3.27Å; E19-E21 PolarHBondContact O-N 2.61Å
22R87.6Confident84.1Confident198 Ų198126.5 Ų126.575%0.74763%0.629SS**Hα-helixtrans-83.7-16.2-179.7-60177.782.2167.86.6113.1E19 M20 P24E19-R22 PolarHBondContact O-N 2.79Å; E19-R22 VanDerWaalsContact O-N 3.13Å; M20-R22 PolarHBondContact O-N 3.15Å; R22-P24 VanDerWaalsContact O-CD 3.24Å; R22-P24 WeakPolarHBondContact O-CD 3.29Å
23I88.4Confident83.2Confident90 Ų90129 Ų12946%0.46265%0.647SS.*SBendtrans-65118.5-179.9-59.7178.6000108.6M20 R25M20-I23 HydrophobicContact CE-CD1 3.79Å; M20-I23 PolarHBondContact O-N 2.84Å; M20-I23 HydrophobicContact SD-CD1 3.54Å; M20-I23 VanDerWaalsContact SD-CD1 3.54Å; I23-R25 PolarHBondContact O-N 3.19Å; I23-R25 VanDerWaalsContact O-N 3.08Å
24P85.4Confident81.9Confident111 Ų111136.5 Ų136.572%0.72167%0.672SS**  trans-56.2120.2175.4-24.735.1000109.8R22 L26R22-P24 VanDerWaalsContact O-CD 3.24Å; R22-P24 WeakPolarHBondContact O-CD 3.29Å; P24-L26 PolarHBondContact O-N 2.97Å
25R82Confident80.5Confident236 Ų236137.6 Ų137.689%0.89168%0.682SS**  trans-66.6112.5178.9-57-173.788.296.4-1.5108I23I23-R25 PolarHBondContact O-N 3.19Å; I23-R25 VanDerWaalsContact O-N 3.08Å
26L76.1Confident79Confident163 Ų163145 Ų14585%0.85370%0.7SS**  trans-58.3142.8161.4-63.3175.4000107.3P24P24-L26 PolarHBondContact O-N 2.97Å
27R77.4Confident77.9Confident231 Ų231145.8 Ų145.887%0.87271%0.713SS**  trans-40.7133.4-174.6-62.9-179.2-171.3131.42109.8
28P77.2Confident76.5Confident113 Ų113145.9 Ų145.973%0.73472%0.724SS**PPolyproline II helixtrans-49.4133.9174.7-2230.3000108.3E30P28-E30 PolarHBondContact O-N 3.15Å
29P70.9Confident75.1Confident115 Ų115149.1 Ų149.175%0.74774%0.744SS**PPolyproline II helixtrans-53.3125168.123.3-30.8000105.9
30E76.2Confident73.5Confident159 Ų159150 Ų15074%0.74376%0.756SS**PPolyproline II helixtrans-48.1136.5175.3-78.9-170.710000107.3P28 H32P28-E30 PolarHBondContact O-N 3.15Å; E30-H32 PolarHBondContact O-N 3.12Å; E30-H32 PolarHBondContact O-ND1 2.76Å
31P74.9Confident72Confident121 Ų121150 Ų15079%0.78677%0.766SS**  trans-59.79417125.6-31.1000105.1P33P31-P33 WeakPolarHBondContact O-CD 3.18Å
32H66.6Low70.9Confident155 Ų155153.7 Ų153.772%0.71877%0.773SS**  trans-56.1118.8176.5-78.956.4000103.3E30 R34E30-H32 PolarHBondContact O-N 3.12Å; E30-H32 PolarHBondContact O-ND1 2.76Å; H32-R34 PolarHBondContact O-N 2.9Å
33P69Low69.7Low124 Ų124152.8 Ų152.881%0.80577%0.774SS**  trans-55.7108.5164.123.2-28.8000103.1P31 D35P31-P33 WeakPolarHBondContact O-CD 3.18Å; P33-D35 PolarHBondContact O-N 3.27Å
34R60.2Low68.2Low223 Ų223154.2 Ų154.284%0.84279%0.789SS**  trans-52.399.3176171.7178.4-80.4174.2-5.8104.1H32 R36H32-R34 PolarHBondContact O-N 2.9Å; R34-R36 VanDerWaalsContact C-N 3.26Å; R34-R36 PolarHBondContact O-N 3.31Å
35D61.1Low66.7Low128 Ų128151.5 Ų151.568%0.68478%0.781SS**  trans-57.8106173.1-169.5-86000103.6P33 S37P33-D35 PolarHBondContact O-N 3.27Å; D35-S37 PolarHBondContact O-N 3.11Å; D35-S37 VanDerWaalsContact OD1-CB 3.31Å; D35-S37 WeakPolarHBondContact OD1-CB 3.42Å
36R61.7Low65.4Low238 Ų238146.2 Ų146.290%0.89878%0.777SS**  trans-81.533.5-166.4-144.6-178.3-172.7-174.52.9108.9R34R34-R36 VanDerWaalsContact C-N 3.26Å; R34-R36 PolarHBondContact O-N 3.31Å
37S65.4Low64.6Low100 Ų100143.9 Ų143.970%0.69978%0.782SS**SBendtrans-116.599.1172.9-62.50000108.3D35D35-S37 PolarHBondContact O-N 3.11Å; D35-S37 VanDerWaalsContact OD1-CB 3.31Å; D35-S37 WeakPolarHBondContact OD1-CB 3.42Å
38G61.7Low63.7Low65 Ų65135.5 Ų135.567%0.6777%0.767SS**SBendtrans144.8-22.414400000118.9
39L62.9Low62.9Low172 Ų172139.3 Ų139.390%0.90178%0.775SS**  trans-131.479.8-177.6-63.5174.3000111.3
40V60.6Low62.1Low128 Ų128142 Ų14278%0.77678%0.782SS**  trans-51.6125.9157.5-153.70000107R42V40-R42 PolarHBondContact O-N 2.96Å
41P59.9Low61.2Low120 Ų120142.6 Ų142.678%0.77979%0.789SS**  trans-63.6105.9166.6-12.826.8000106K43P41-K43 VanDerWaalsContact C-N 3.27Å; P41-K43 PolarHBondContact O-N 2.97Å
42R64.1Low60.3Low238 Ų238143.1 Ų143.190%0.89879%0.79SS**  trans-61.8102.3165.9-81.9-174.478.1-132.66.3105.5V40 P44V40-R42 PolarHBondContact O-N 2.96Å; R42-P44 WeakPolarHBondContact O-CD 3.43Å
43K63.2Low59.1Low179 Ų179145 Ų14578%0.77880%0.799SS**  trans-44.8122.3164.7179.7165.2174.3159.20106.8P41 G45P41-K43 VanDerWaalsContact C-N 3.27Å; P41-K43 PolarHBondContact O-N 2.97Å; K43-G45 PolarHBondContact O-N 2.98Å
44P55.7Low57.7Low120 Ų120142.5 Ų142.578%0.77980%0.797SS**  trans-57.6109.3166-17.629.7000105.8R42R42-P44 WeakPolarHBondContact O-CD 3.43Å
45G54.9Low57.1Low53 Ų53137.9 Ų137.955%0.54679%0.789SS.*  trans-59.6147.1167.500000107.9K43 A47K43-G45 PolarHBondContact O-N 2.98Å; G45-A47 PolarHBondContact O-N 2.99Å
46P54.4Low56.7Low125 Ų125137.9 Ų137.981%0.81280%0.796SS**  trans-56116.2174.124.5-31.5000108.2G48P46-G48 VanDerWaalsContact C-N 3.27Å; P46-G48 PolarHBondContact O-N 3.11Å
47A58.4Low56Low115 Ų115132 Ų13295%0.9579%0.786SS**SBendtrans-73.188.5171.900000107.5G45G45-A47 PolarHBondContact O-N 2.99Å
48G59.3Low55Low54 Ų54130 Ų13056%0.55778%0.781SS**  trans179.9127.2176.200000108.4P46P46-G48 VanDerWaalsContact C-N 3.27Å; P46-G48 PolarHBondContact O-N 3.11Å
49E59.5Low54.4Low193 Ų193133 Ų13390%0.90279%0.792SS**SBendtrans86.751.2168.4-43.9-168.6100.400117.6
50L55.2Low53.4Low172 Ų172130 Ų13090%0.90179%0.785SS**  trans-137.136.1150.8-81.3-179.2000112.2
51L57.2Low53.3Low171 Ų171129.8 Ų129.890%0.89579%0.787SS**SBendtrans-118.747.2168.1-68178.1000110.8
52T55.5Low52.5Low132 Ų132132 Ų13281%0.8182%0.815SS**  trans-158.8110.4159-540000106.9
53Q42.4Very low51.9Low194 Ų194126.7 Ų126.791%0.90781%0.811SS**  153.3107.2129.9-166.3170.5-74.700111.6
54G39.1Very low51.3Low73 Ų73123.9 Ų123.975%0.75381%0.813SS**  105.8101.8128.600000118.5
55N46.6Very low51.1Low126 Ų126124.2 Ų124.267%0.67482%0.815SS**  107113.2128.8-159.31.4000117.8T57N55-T57 PolarHBondContact ND2-OG1 3.39Å; N55-T57 PolarHBondContact O-N 3.34Å; N55-T57 PolarHBondContact OD1-OG1 3.25Å
56P52.8Low50.9Low127 Ų127128.4 Ų128.483%0.82583%0.831SS**  trans-85.391.316334.6-25.8000108.7G58P56-G58 PolarHBondContact O-N 2.98Å
57T47.9Very low50.7Low115 Ų115128.6 Ų128.671%0.70683%0.832SS**  trans-91.899.3172.3-52.60000110.3N55N55-T57 PolarHBondContact ND2-OG1 3.39Å; N55-T57 PolarHBondContact O-N 3.34Å; N55-T57 PolarHBondContact OD1-OG1 3.25Å
58G44.6Very low50.1Low57 Ų57129.5 Ų129.559%0.58882%0.824SS**  39.6120.1127.300000120.6P56P56-G58 PolarHBondContact O-N 2.98Å
59S48.7Very low49.5Very low129 Ų129134.9 Ų134.990%0.90284%0.843SS**  trans79.1123.2131.7-58.70000120.8
60S40.6Very low48.7Very low108 Ų108130.4 Ų130.476%0.75584%0.838SS**  trans-57.4166.1160.5-152.80000112.3
61P58.8Low48.2Very low124 Ų124126.9 Ų126.981%0.80583%0.833SS**  -146176.179.734.5-13.6000116.1
62A44Very low47.4Very low167 Ų167122.9 Ų122.9100%1.3883%0.828SS**  trans-64.20167.200000113.9

Retrieved 62 of 62 residues in 13.9 ms (Link to these results)