A0A087WQ97_MOUSE Loading...

CLOCK interacting protein, circadian

AlphaFold DB , UniProt , Accession A0A087WQ97, Species MOUSE (Mus musculus, Mouse), Gene Cipc, Length 60 aa.

						>A0A087WQ97_MOUSE|A0A087WQ97|Cipc
MQRVPVLRLPAILDMERKIPSRESPRRLSAKPGRGTEMKKLARPLGVVAADSDKDSGFSG
					

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(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	53.5	Low	65.5	Low	226 Å²	226	157.5 Å²	157.5	100%	1.113	81%	0.811	S	S	*	*				0	133.6	0	-70.4	174.3	89.3	0	0	108.7
2	Q	62.9	Low	64.9	Low	169 Å²	169	156.4 Å²	156.4	79%	0.79	81%	0.805	S	S	*	*			trans	57.4	91.9	159.1	-58.2	-175.4	57.3	0	0	118.5	V4	Q2-V4 PolarHBondContact O-N 3.45Å
3	R	68.1	Low	64.4	Low	246 Å²	246	154.9 Å²	154.9	93%	0.928	80%	0.799	S	S	*	*			trans	-70.7	117.6	152.9	-71.2	179	174.1	152.1	-1.5	107	P5	R3-P5 WeakPolarHBondContact O-CD 3.17Å
4	V	69.9	Low	64	Low	129 Å²	129	153.4 Å²	153.4	78%	0.782	79%	0.793	S	S	*	*			trans	-66	115.1	178	-173.4	0	0	0	0	108.4	Q2	Q2-V4 PolarHBondContact O-N 3.45Å
5	P	69.4	Low	63.9	Low	116 Å²	116	154.5 Å²	154.5	75%	0.753	80%	0.796	S	S	*	*			trans	-105.9	93.9	176.6	33.1	-16.6	0	0	0	107.7	R3	R3-P5 WeakPolarHBondContact O-CD 3.17Å
6	V	66.5	Low	64	Low	118 Å²	118	155.7 Å²	155.7	72%	0.715	80%	0.797	S	S	*	*			trans	-143.9	76.7	162.2	-162.7	0	0	0	0	108.7	R8	V6-R8 PolarHBondContact O-N 2.95Å; V6-R8 VanDerWaalsContact C-N 3.27Å
7	L	68.9	Low	64.2	Low	172 Å²	172	159.2 Å²	159.2	90%	0.901	80%	0.798	S	S	*	*			trans	-59.8	104.2	153	-75	169.4	0	0	0	106.1	L9	L7-L9 PolarHBondContact O-N 3.05Å; L7-L9 VanDerWaalsContact O-N 3.11Å
8	R	68.8	Low	64.1	Low	235 Å²	235	160.7 Å²	160.7	89%	0.887	80%	0.798	S	S	*	*			trans	-55.9	113.1	176	-175.9	173.8	178.3	136.3	-2.2	108	V6	V6-R8 PolarHBondContact O-N 2.95Å; V6-R8 VanDerWaalsContact C-N 3.27Å
9	L	69.5	Low	64.2	Low	149 Å²	149	160.3 Å²	160.3	78%	0.78	80%	0.797	S	S	*	*			trans	-51	137.9	-179.8	-127.4	88.9	0	0	0	110.9	L7 A11	L7-L9 PolarHBondContact O-N 3.05Å; L7-L9 VanDerWaalsContact O-N 3.11Å; L9-A11 PolarHBondContact O-N 3.11Å
10	P	57.5	Low	64	Low	84 Å²	84	157.7 Å²	157.7	55%	0.545	79%	0.792	S	S	.	*			trans	-73.9	94.6	161.1	30.1	-30.2	0	0	0	108.7	I12	P10-I12 PolarHBondContact O-N 3.05Å
11	A	65.2	Low	64	Low	88 Å²	88	155 Å²	155	73%	0.727	79%	0.789	S	S	*	*	T	Hydrogen-bonded Turn	trans	-74.8	35.1	167.2	0	0	0	0	0	112.1	L9	L9-A11 PolarHBondContact O-N 3.11Å
12	I	58.3	Low	64.3	Low	145 Å²	145	155.2 Å²	155.2	74%	0.744	78%	0.777	S	S	*	*	T	Hydrogen-bonded Turn	trans	-111.7	-4.5	176.3	-26	177.4	0	0	0	110.6	P10	P10-I12 PolarHBondContact O-N 3.05Å
13	L	58.9	Low	64.2	Low	137 Å²	137	154.5 Å²	154.5	72%	0.717	77%	0.774	S	S	*	*	S	Bend	trans	-103	2	172.4	-61.8	178.5	0	0	0	112.9	M15	L13-M15 PolarHBondContact O-N 2.94Å
14	D	58.8	Low	63.9	Low	134 Å²	134	145.9 Å²	145.9	72%	0.717	75%	0.751	S	S	*	*	T	Hydrogen-bonded Turn	trans	-77.7	44.8	166.7	-160	26.1	0	0	0	111.3	E16	D14-E16 VanDerWaalsContact C-N 3.3Å
15	M	61.3	Low	63.5	Low	170 Å²	170	144.2 Å²	144.2	84%	0.837	74%	0.743	S	S	*	*	T	Hydrogen-bonded Turn	trans	-92.7	6.5	163.6	-102.5	-172	52.6	0	0	110.8	L13	L13-M15 PolarHBondContact O-N 2.94Å
16	E	67	Low	63.3	Low	173 Å²	173	149.8 Å²	149.8	81%	0.808	75%	0.749	S	S	*	*	S	Bend	trans	-92.2	-4.4	-171.1	-68.4	-129.1	135.1	0	0	114.8	D14	D14-E16 VanDerWaalsContact C-N 3.3Å
17	R	67.3	Low	63	Low	216 Å²	216	154.2 Å²	154.2	82%	0.815	75%	0.753	S	S	*	*	S	Bend	trans	-139	49.2	-175.5	-63.9	-172.1	-172.4	153.9	4.3	116.4
18	K	62.1	Low	62.6	Low	186 Å²	186	153.5 Å²	153.5	81%	0.809	75%	0.749	S	S	*	*			trans	173.4	109.5	130.9	-100.6	160.6	-177.6	-105.7	0	103.1	P20	K18-P20 VanDerWaalsContact C-N 3.33Å; K18-P20 WeakPolarHBondContact O-CD 3.12Å
19	I	65	Low	62.4	Low	152 Å²	152	147.7 Å²	147.7	78%	0.779	75%	0.745	S	S	*	*			trans	-48.5	114.5	145.7	-57.5	163.5	0	0	0	102.5	S21	I19-S21 PolarHBondContact O-N 2.91Å
20	P	61.5	Low	62	Low	108 Å²	108	144.7 Å²	144.7	70%	0.701	74%	0.742	S	S	*	*			trans	-56.6	106.8	162.9	23.9	-27.8	0	0	0	100.9	K18 R22	K18-P20 VanDerWaalsContact C-N 3.33Å; K18-P20 WeakPolarHBondContact O-CD 3.12Å; P20-R22 PolarHBondContact O-N 2.86Å
21	S	63.7	Low	62.4	Low	102 Å²	102	149.1 Å²	149.1	71%	0.713	75%	0.752	S	S	*	*			trans	-45.3	110.2	176.3	172.8	0	0	0	0	101.4	I19 E23	I19-S21 PolarHBondContact O-N 2.91Å; S21-E23 PolarHBondContact O-N 3.17Å
22	R	60.4	Low	62	Low	231 Å²	231	151.1 Å²	151.1	87%	0.872	76%	0.758	S	S	*	*			trans	-73.4	78.8	178	-153.9	-176.5	-174.5	176.5	2.5	99.6	P20 S24	P20-R22 PolarHBondContact O-N 2.86Å; R22-S24 WeakPolarHBondContact O-CB 3.27Å; R22-S24 PolarHBondContact O-N 3.21Å
23	E	60.1	Low	62.1	Low	153 Å²	153	147.4 Å²	147.4	72%	0.715	76%	0.756	S	S	*	*			trans	-54.9	62.2	134.4	-169.6	155.3	-152.8	0	0	105.4	S21 P25	S21-E23 PolarHBondContact O-N 3.17Å; E23-P25 VanDerWaalsContact C-N 3.26Å; E23-P25 VanDerWaalsContact O-CD 3.27Å; E23-P25 WeakPolarHBondContact O-CD 3.42Å; E23-P25 VanDerWaalsContact O-N 3.09Å
24	S	60.9	Low	62.2	Low	66 Å²	66	152.7 Å²	152.7	46%	0.462	77%	0.766	S	S	.	*				-24.2	109.4	116.6	168.1	0	0	0	0	104.4	R22 R26	R22-S24 WeakPolarHBondContact O-CB 3.27Å; R22-S24 PolarHBondContact O-N 3.21Å; S24-R26 PolarHBondContact O-N 2.67Å
25	P	62.9	Low	62.1	Low	94 Å²	94	149.5 Å²	149.5	61%	0.61	77%	0.765	S	S	*	*			trans	-38.3	120.8	161.3	-28.2	35.5	0	0	0	105.4	E23 R27	E23-P25 VanDerWaalsContact C-N 3.26Å; E23-P25 VanDerWaalsContact O-CD 3.27Å; E23-P25 WeakPolarHBondContact O-CD 3.42Å; E23-P25 VanDerWaalsContact O-N 3.09Å; P25-R27 CarbonylContact O-C 3.47Å; P25-R27 PolarHBondContact O-N 3.16Å
26	R	63.8	Low	61.6	Low	232 Å²	232	146.6 Å²	146.6	88%	0.875	76%	0.757	S	S	*	*	S	Bend	trans	-69.1	63.5	-170.6	-148	-174.9	-161.8	114.7	-4.4	108.2	S24	S24-R26 PolarHBondContact O-N 2.67Å
27	R	61.5	Low	61.4	Low	211 Å²	211	146 Å²	146	80%	0.796	75%	0.754	S	S	*	*			trans	-157.8	75	-172.3	-55.1	-173	82	-175.7	4	100.7	P25 S29	P25-R27 CarbonylContact O-C 3.47Å; P25-R27 PolarHBondContact O-N 3.16Å; R27-S29 PolarHBondContact O-N 2.63Å
28	L	60.8	Low	61	Low	157 Å²	157	143.6 Å²	143.6	82%	0.822	75%	0.754	S	S	*	*				25	92.5	96.2	-64.3	177.6	0	0	0	107	A30	L28-A30 PolarHBondContact O-N 2.71Å
29	S	64.1	Low	61.1	Low	114 Å²	114	142.6 Å²	142.6	80%	0.797	75%	0.75	S	S	*	*			trans	-54.6	84.3	157.4	45.4	0	0	0	0	105.6	R27 K31	R27-S29 PolarHBondContact O-N 2.63Å; S29-K31 PolarHBondContact O-N 3.04Å
30	A	61.4	Low	61	Low	86 Å²	86	145 Å²	145	71%	0.711	76%	0.755	S	S	*	*			trans	-60.4	92.8	159.8	0	0	0	0	0	102.3	L28 P32	L28-A30 PolarHBondContact O-N 2.71Å; A30-P32 WeakPolarHBondContact O-CD 3.46Å
31	K	65.5	Low	60.9	Low	177 Å²	177	147.3 Å²	147.3	77%	0.77	76%	0.76	S	S	*	*			trans	-46	126.9	149.4	-66.6	-174.4	178.5	179.6	0	104.1	S29 G33	S29-K31 PolarHBondContact O-N 3.04Å; K31-G33 VanDerWaalsContact O-N 3.09Å; K31-G33 WeakPolarHBondContact O-CA 3.49Å; K31-G33 PolarHBondContact O-N 2.7Å
32	P	55.9	Low	61	Low	129 Å²	129	147.6 Å²	147.6	84%	0.838	77%	0.769	S	S	*	*	S	Bend	trans	-43.7	126.1	169.4	-26.5	33.6	0	0	0	108.2	A30	A30-P32 WeakPolarHBondContact O-CD 3.46Å
33	G	61.1	Low	61.1	Low	68 Å²	68	146.8 Å²	146.8	70%	0.701	77%	0.766	S	S	*	*			trans	-53.1	136.9	-147.4	0	0	0	0	0	115.8	K31 G35	K31-G33 VanDerWaalsContact O-N 3.09Å; K31-G33 WeakPolarHBondContact O-CA 3.49Å; K31-G33 PolarHBondContact O-N 2.7Å; G33-G35 PolarHBondContact O-N 2.88Å; G33-G35 VanDerWaalsContact O-N 3.09Å
34	R	60.4	Low	61.1	Low	247 Å²	247	145.9 Å²	145.9	93%	0.932	77%	0.773	S	S	*	*			trans	-79.1	56.5	146.1	-78.7	-94	-176.4	148.4	-0.4	108.4	T36	R34-T36 VanDerWaalsContact C-N 3.3Å
35	G	57.7	Low	61.1	Low	68 Å²	68	150.3 Å²	150.3	70%	0.701	79%	0.791	S	S	*	*			trans	-99.2	58.6	167.1	0	0	0	0	0	107.9	G33 E37	G33-G35 PolarHBondContact O-N 2.88Å; G33-G35 VanDerWaalsContact O-N 3.09Å; G35-E37 PolarHBondContact O-N 3.11Å
36	T	51.1	Low	60.7	Low	109 Å²	109	149.2 Å²	149.2	67%	0.669	80%	0.796	S	S	*	*			trans	-75.2	75.7	162	-38	0	0	0	0	106.2	R34 M38	R34-T36 VanDerWaalsContact C-N 3.3Å; T36-M38 HydrophobicContact CG2-CG 3.58Å; T36-M38 PolarHBondContact O-N 3.23Å
37	E	61.6	Low	60.2	Low	159 Å²	159	144 Å²	144	74%	0.743	79%	0.79	S	S	*	*			trans	-64.1	100.5	145.1	-168.2	-175.4	169.1	0	0	104.2	G35 K39	G35-E37 PolarHBondContact O-N 3.11Å; E37-K39 PolarHBondContact O-N 3.21Å
38	M	59.4	Low	60.2	Low	166 Å²	166	140.2 Å²	140.2	82%	0.818	79%	0.79	S	S	*	*			trans	-64.6	84.4	171.1	-70.2	175.7	83.5	0	0	107.5	T36	T36-M38 HydrophobicContact CG2-CG 3.58Å; T36-M38 PolarHBondContact O-N 3.23Å
39	K	64	Low	60.1	Low	165 Å²	165	137 Å²	137	72%	0.717	79%	0.786	S	S	*	*			trans	-121.1	103.5	150.4	-107.4	172.8	179.6	170.2	0	107.6	E37 L41	E37-K39 PolarHBondContact O-N 3.21Å; K39-L41 PolarHBondContact O-N 2.62Å
40	K	63.3	Low	60	Low	204 Å²	204	135.3 Å²	135.3	89%	0.887	78%	0.78	S	S	*	*			trans	-47.9	99.3	167.8	-63.1	-174.3	178.7	-166.9	0	108.9
41	L	60.1	Low	59.9	Low	156 Å²	156	139.3 Å²	139.3	82%	0.817	79%	0.789	S	S	*	*			trans	-136.3	105.3	158.9	-73.2	176.5	0	0	0	106.2	K39 R43	K39-L41 PolarHBondContact O-N 2.62Å; L41-R43 PolarHBondContact O-N 2.73Å
42	A	65.8	Low	59.6	Low	108 Å²	108	135.5 Å²	135.5	89%	0.893	78%	0.784	S	S	*	*			trans	-52.2	109.3	177.6	0	0	0	0	0	109.7
43	R	61.8	Low	60.3	Low	213 Å²	213	136 Å²	136	80%	0.804	78%	0.78	S	S	*	*			trans	-124.8	119.3	159.8	-93.2	-175.9	170.9	-105.7	0.5	106.8	L41 L45	L41-R43 PolarHBondContact O-N 2.73Å; R43-L45 VanDerWaalsContact C-N 3.3Å; R43-L45 HydrophobicContact CB-CD1 4.36Å; R43-L45 PolarHBondContact O-N 3.01Å
44	P	60.4	Low	60.8	Low	135 Å²	135	141.9 Å²	141.9	88%	0.877	79%	0.786	S	S	*	*			trans	-64.1	100.1	166.4	25.9	-28.9	0	0	0	107.1	G46	P44-G46 PolarHBondContact O-N 3.09Å; P44-G46 VanDerWaalsContact C-N 3.31Å
45	L	59.8	Low	61.1	Low	158 Å²	158	137.2 Å²	137.2	83%	0.827	78%	0.78	S	S	*	*			trans	-73	89.8	172.2	-114.9	85.4	0	0	0	107.5	R43	R43-L45 VanDerWaalsContact C-N 3.3Å; R43-L45 HydrophobicContact CB-CD1 4.36Å; R43-L45 PolarHBondContact O-N 3.01Å
46	G	56.3	Low	61.6	Low	71 Å²	71	139.7 Å²	139.7	73%	0.732	79%	0.786	S	S	*	*			trans	-127.3	63	164.2	0	0	0	0	0	107.8	P44 V48	P44-G46 PolarHBondContact O-N 3.09Å; P44-G46 VanDerWaalsContact C-N 3.31Å; G46-V48 PolarHBondContact O-N 2.62Å; G46-V48 VanDerWaalsContact O-N 3.09Å
47	V	51.9	Low	62.6	Low	123 Å²	123	137.4 Å²	137.4	75%	0.745	79%	0.785	S	S	*	*			trans	-50.5	116.4	167.1	168.6	0	0	0	0	107.4	A49	V47-A49 PolarHBondContact O-N 3.09Å
48	V	62	Low	62.7	Low	131 Å²	131	139.3 Å²	139.3	79%	0.794	79%	0.791	S	S	*	*			trans	25.8	75.4	146	-175.6	0	0	0	0	112	G46 A50	G46-V48 PolarHBondContact O-N 2.62Å; G46-V48 VanDerWaalsContact O-N 3.09Å; V48-A50 PolarHBondContact O-N 2.75Å
49	A	59.1	Low	63.2	Low	89 Å²	89	137 Å²	137	74%	0.736	79%	0.791	S	S	*	*			trans	-61.8	119.5	154.8	0	0	0	0	0	104.5	V47 D51	V47-A49 PolarHBondContact O-N 3.09Å; A49-D51 PolarHBondContact O-N 3.04Å; A49-D51 VanDerWaalsContact O-N 3.11Å
50	A	62.4	Low	62.6	Low	80 Å²	80	135.5 Å²	135.5	66%	0.661	82%	0.823	S	S	*	*			trans	-41.8	123.3	174.4	0	0	0	0	0	108.9	V48 S52	V48-A50 PolarHBondContact O-N 2.75Å; A50-S52 PolarHBondContact O-N 2.88Å
51	D	58.4	Low	62.6	Low	170 Å²	170	132.1 Å²	132.1	91%	0.909	82%	0.82	S	S	*	*			trans	-59.4	82.4	161.2	-82.3	-47.1	0	0	0	106.5	A49 D53	A49-D51 PolarHBondContact O-N 3.04Å; A49-D51 VanDerWaalsContact O-N 3.11Å; D51-D53 VanDerWaalsContact C-N 3.27Å; D51-D53 PolarHBondContact O-N 3.09Å; D51-D53 VanDerWaalsContact O-N 3.16Å
52	S	59.6	Low	62.7	Low	96 Å²	96	130.8 Å²	130.8	67%	0.671	82%	0.82	S	S	*	*			trans	-77.8	92.4	163.8	-99.7	0	0	0	0	105.3	A50 K54	A50-S52 PolarHBondContact O-N 2.88Å; S52-K54 PolarHBondContact O-N 2.95Å
53	D	71.3	Confident	62.5	Low	139 Å²	139	132.1 Å²	132.1	74%	0.743	82%	0.816	S	S	*	*			trans	-46	109	166	-170.5	-4.3	0	0	0	109.2	D51 D55	D51-D53 VanDerWaalsContact C-N 3.27Å; D51-D53 PolarHBondContact O-N 3.09Å; D51-D53 VanDerWaalsContact O-N 3.16Å; D53-D55 PolarHBondContact OD1-N 3.02Å
54	K	69.6	Low	62.6	Low	192 Å²	192	127.4 Å²	127.4	84%	0.835	82%	0.816	S	S	*	*			trans	-110.9	25.6	178.3	-85	-150.1	180	-176.6	0	112	S52	S52-K54 PolarHBondContact O-N 2.95Å
55	D	67.6	Low	62.7	Low	150 Å²	150	126.9 Å²	126.9	80%	0.802	81%	0.813	S	S	*	*			trans	-102.3	35.5	175.6	-69.2	-26.4	0	0	0	113.1	D53 G57	D53-D55 PolarHBondContact OD1-N 3.02Å; D55-G57 PolarHBondContact O-N 2.89Å
56	S	67.8	Low	62.9	Low	119 Å²	119	124.8 Å²	124.8	83%	0.832	81%	0.812	S	S	*	*			trans	-76.8	72.3	163	175.2	0	0	0	0	110	F58	S56-F58 PolarHBondContact O-N 2.78Å
57	G	73.5	Confident	63.4	Low	62 Å²	62	128.6 Å²	128.6	64%	0.639	82%	0.817	S	S	*	*			trans	-63.6	109.1	168.2	0	0	0	0	0	110.5	D55 S59	D55-G57 PolarHBondContact O-N 2.89Å; G57-S59 PolarHBondContact O-N 3Å
58	F	62.7	Low	64.2	Low	198 Å²	198	129.1 Å²	129.1	87%	0.868	82%	0.823	S	S	*	*			trans	-66.1	102.4	163.9	-175.3	-94.5	0	0	0	107.7	S56	S56-F58 PolarHBondContact O-N 2.78Å
59	S	68.9	Low	64.4	Low	118 Å²	118	128.9 Å²	128.9	83%	0.825	83%	0.825	S	S	*	*			trans	-84.1	109.4	167.6	-61.7	0	0	0	0	107.8	G57	G57-S59 PolarHBondContact O-N 3Å
60	G	52.2	Low	64.9	Low	134 Å²	134	132.5 Å²	132.5	100%	1.381	83%	0.833	S	S	*	*			trans	-91.1	0	161.3	0	0	0	0	0	110.8

Retrieved 60 of 60 residues in 17.5 ms (Link to these results)

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