A0A087WQL0_MOUSE Loading...

Oocyte maturation, beta

AlphaFold DB , UniProt , Accession A0A087WQL0, Species MOUSE (Mus musculus, Mouse), Gene Omt2b, Length 56 aa.

						>A0A087WQL0_MOUSE|A0A087WQL0|Omt2b
MMSQLHICYGPVCEMQHHLPSFLDPLEFVIVYLETWVYKGLFDLRPELLLYFLNMH
					

Structure Viewer

Loading PAE data...

(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	42	Very low	43.9	Very low	224 Å²	224	99.7 Å²	99.7	100%	1.103	56%	0.562	S	S	*	*				0	126.5	0	-83.1	168.7	152	0	0	107.1
2	M	34.4	Very low	43.5	Very low	153 Å²	153	98.5 Å²	98.5	75%	0.754	56%	0.558	S	S	*	*			trans	-82.2	120.4	176.2	-69.9	179	87.4	0	0	108.5
3	S	43.6	Very low	44	Very low	82 Å²	82	96.9 Å²	96.9	57%	0.573	56%	0.556	S	S	*	*			trans	-87.8	113.5	174.9	-52.8	0	0	0	0	108.3
4	Q	44.1	Very low	44.2	Very low	123 Å²	123	98.9 Å²	98.9	58%	0.575	56%	0.558	S	S	*	*	P	Polyproline II helix	trans	-81	117.8	172.3	-78.5	176.8	-31	0	0	109
5	L	43.5	Very low	44.4	Very low	60 Å²	60	98.3 Å²	98.3	31%	0.314	55%	0.55	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-98.2	118	172.6	-151.3	91.2	0	0	0	108.5	I7 L19 F28	L5-I7 HydrophobicContact CD2-CD1 4.09Å; L5-I7 HydrophobicContact CD2-CG1 3.88Å; L5-L19 HydrophobicContact CB-CD1 4.05Å; L5-L19 HydrophobicContact CD2-CD1 4.26Å; L5-F28 HydrophobicContact CD2-CE1 3.8Å; L5-F28 HydrophobicContact CD2-CZ 3.54Å
6	H	44.8	Very low	44.8	Very low	111 Å²	111	97 Å²	97	51%	0.514	54%	0.538	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-88.9	117.4	171.7	-83.6	101.1	0	0	0	109	M15	H6-M15 VanDerWaalsContact NE2-CE 3.29Å; H6-M15 WeakPolarHBondContact NE2-CE 3.14Å; H6-M15 WeakPolarHBondContact NE2-CG 3.07Å
7	I	49.6	Very low	44.7	Very low	11 Å²	11	97.1 Å²	97.1	6%	0.056	53%	0.534	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-110.8	123.5	173.4	-51.1	167.6	0	0	0	107.4	L5 Y9 E14 W36	L5-I7 HydrophobicContact CD2-CD1 4.09Å; L5-I7 HydrophobicContact CD2-CG1 3.88Å; I7-Y9 HydrophobicContact CB-CE2 4.28Å; I7-Y9 HydrophobicContact CG2-CD2 4.17Å; I7-Y9 HydrophobicContact CG2-CE1 4.1Å; I7-Y9 HydrophobicContact CG2-CE2 3.41Å; I7-Y9 VanDerWaalsContact CG2-CE2 3.41Å; I7-Y9 WeakPolarHBondContact CG2-OH 3.34Å; I7-E14 PolarHBondContact N-O 3.27Å; I7-E14 PolarHBondContact O-N 3.36Å; I7-E14 VanDerWaalsContact O-O 3.12Å; I7-W36 HydrophobicContact CD1-CH2 3.89Å; I7-W36 HydrophobicContact CD1-CZ2 3.49Å; I7-W36 VanDerWaalsContact CD1-CZ2 3.49Å; I7-W36 HydrophobicContact CG1-CH2 4.39Å; I7-W36 HydrophobicContact CG1-CZ2 4.44Å
8	C	42.6	Very low	44.9	Very low	61 Å²	61	100.4 Å²	100.4	41%	0.412	54%	0.544	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-114.7	128.8	-178.4	-61.2	0	0	0	0	110	C13	C8-C13 HydrophobicContact CB-CB 4.11Å; C8-C13 WeakPolarHBondContact CB-SG 3.43Å; C8-C13 WeakPolarHBondContact SG-CB 3.29Å; C8-C13 CovalentContact SG-SG 2.05Å; C8-C13 PolarHBondContact SG-SG 3.07Å
9	Y	46.7	Very low	45.1	Very low	62 Å²	62	97.1 Å²	97.1	24%	0.243	53%	0.526	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-121.3	101.7	175.3	-59.4	-76.4	0	0	0	108.3	I7 V12 L41 F42	I7-Y9 HydrophobicContact CB-CE2 4.28Å; I7-Y9 HydrophobicContact CG2-CD2 4.17Å; I7-Y9 HydrophobicContact CG2-CE1 4.1Å; I7-Y9 HydrophobicContact CG2-CE2 3.41Å; I7-Y9 VanDerWaalsContact CG2-CE2 3.41Å; I7-Y9 WeakPolarHBondContact CG2-OH 3.34Å; Y9-V12 CarbonylContact C-O 3.57Å; Y9-V12 PolarHBondContact N-O 2.05Å; Y9-V12 PolarHBondContact O-N 3.25Å; Y9-V12 VanDerWaalsContact O-O 3.13Å; Y9-L41 HydrophobicContact CD1-CB 4.26Å; Y9-L41 HydrophobicContact CD1-CD2 4.32Å; Y9-L41 HydrophobicContact CE1-CB 3.63Å; Y9-L41 HydrophobicContact CE1-CD1 4.28Å; Y9-L41 HydrophobicContact CE1-CD2 4.17Å; Y9-L41 HydrophobicContact CE1-CG 4.24Å; Y9-F42 HydrophobicContact CD1-CE2 4.25Å; Y9-F42 HydrophobicContact CD1-CZ 4.33Å; Y9-F42 HydrophobicContact CE1-CD2 4.05Å; Y9-F42 AromaticContact CE1-CE2 3.4Å; Y9-F42 HydrophobicContact CE1-CE2 3.4Å; Y9-F42 AromaticContact CE1-CZ 3.86Å; Y9-F42 HydrophobicContact CE1-CZ 3.86Å
10	G	50.7	Low	45.2	Very low	72 Å²	72	96.4 Å²	96.4	74%	0.742	53%	0.526	S	S	*	.	T	Hydrogen-bonded Turn	trans	63.7	-136.9	-176.3	0	0	0	0	0	112.6	V12	G10-V12 PolarHBondContact O-N 2.92Å
11	P	40.8	Very low	45.5	Very low	138 Å²	138	95.5 Å²	95.5	90%	0.896	53%	0.527	S	S	*	.	T	Hydrogen-bonded Turn	trans	-76.3	-0.2	-179.6	32.3	-34.3	0	0	0	113.8
12	V	39.4	Very low	45.8	Very low	85 Å²	85	94.2 Å²	94.2	52%	0.515	52%	0.516	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-112.5	122.2	-176.8	-173	0	0	0	0	109	Y9 G10 E14	Y9-V12 CarbonylContact C-O 3.57Å; Y9-V12 PolarHBondContact N-O 2.05Å; Y9-V12 PolarHBondContact O-N 3.25Å; Y9-V12 VanDerWaalsContact O-O 3.13Å; G10-V12 PolarHBondContact O-N 2.92Å; V12-E14 HydrophobicContact CG1-CG 4.41Å
13	C	49.5	Very low	46.6	Very low	78 Å²	78	89.5 Å²	89.5	53%	0.527	49%	0.494	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-104.2	122.4	168.1	-68	0	0	0	0	108.8	C8	C8-C13 HydrophobicContact CB-CB 4.11Å; C8-C13 WeakPolarHBondContact CB-SG 3.43Å; C8-C13 WeakPolarHBondContact SG-CB 3.29Å; C8-C13 CovalentContact SG-SG 2.05Å; C8-C13 PolarHBondContact SG-SG 3.07Å
14	E	47.1	Very low	47.5	Very low	124 Å²	124	90.1 Å²	90.1	58%	0.579	49%	0.49	S	S	*	.	E	Extended strand (participates in β ladder)	trans	-101.2	126.9	171.6	-73.1	-169.6	165.7	0	0	109.3	I7 V12 Q16	I7-E14 PolarHBondContact N-O 3.27Å; I7-E14 PolarHBondContact O-N 3.36Å; I7-E14 VanDerWaalsContact O-O 3.12Å; V12-E14 HydrophobicContact CG1-CG 4.41Å; E14-Q16 PolarHBondContact O-N 3.18Å
15	M	47.5	Very low	48.2	Very low	90 Å²	90	89.1 Å²	89.1	44%	0.443	50%	0.495	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-90.8	100.7	-179.1	-158.4	-176.5	-41.4	0	0	109.2	H6 H17	H6-M15 VanDerWaalsContact NE2-CE 3.29Å; H6-M15 WeakPolarHBondContact NE2-CE 3.14Å; H6-M15 WeakPolarHBondContact NE2-CG 3.07Å; M15-H17 WeakPolarHBondContact CG-CE1 3.42Å; M15-H17 PolarHBondContact O-N 3.49Å; M15-H17 PolarHBondContact O-ND1 3.03Å; M15-H17 PolarHBondContact SD-CE1 2.95Å
16	Q	50.2	Low	49.1	Very low	78 Å²	78	89.5 Å²	89.5	36%	0.364	50%	0.497	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-78.5	113.8	175.1	-77.3	-169.3	-7.8	0	0	110.6	E14	E14-Q16 PolarHBondContact O-N 3.18Å
17	H	43.7	Very low	49.8	Very low	99 Å²	99	89.1 Å²	89.1	46%	0.458	50%	0.495	S	S	.	.			trans	-89.4	2.7	-174.5	-77.4	43.9	0	0	0	114.7	M15	M15-H17 WeakPolarHBondContact CG-CE1 3.42Å; M15-H17 PolarHBondContact O-N 3.49Å; M15-H17 PolarHBondContact O-ND1 3.03Å; M15-H17 PolarHBondContact SD-CE1 2.95Å
18	H	47.6	Very low	50.6	Low	156 Å²	156	89.8 Å²	89.8	72%	0.722	50%	0.498	S	S	*	.			trans	-137.5	64.6	-174.6	-66.6	-63.8	0	0	0	111.6	P20	H18-P20 WeakPolarHBondContact O-CD 3.35Å
19	L	49.8	Very low	51.6	Low	38 Å²	38	89.1 Å²	89.1	20%	0.199	49%	0.491	C	S	.	.			trans	-77.7	120.1	151	-109.2	81	0	0	0	107	L5 S21 F28	L5-L19 HydrophobicContact CB-CD1 4.05Å; L5-L19 HydrophobicContact CD2-CD1 4.26Å; L19-S21 PolarHBondContact O-N 3.34Å; L19-S21 VanDerWaalsContact O-N 3.16Å; L19-F28 HydrophobicContact CD1-CE2 3.67Å; L19-F28 HydrophobicContact CD1-CZ 4.02Å; L19-F28 HydrophobicContact CD2-CD2 3.62Å; L19-F28 HydrophobicContact CD2-CE2 3.39Å; L19-F28 HydrophobicContact CD2-CG 4.31Å; L19-F28 HydrophobicContact CD2-CZ 3.88Å; L19-F28 HydrophobicContact CG-CD2 4.12Å; L19-F28 HydrophobicContact CG-CE2 3.63Å; L19-F28 HydrophobicContact CG-CZ 4.33Å
20	P	46.7	Very low	52.5	Low	82 Å²	82	88.3 Å²	88.3	53%	0.532	49%	0.491	S	S	.	.			trans	-55.5	125.8	163.8	23.3	-29.3	0	0	0	107	H18 F22	H18-P20 WeakPolarHBondContact O-CD 3.35Å; P20-F22 PolarHBondContact O-N 3.43Å
21	S	50.3	Low	53	Low	78 Å²	78	88.2 Å²	88.2	55%	0.545	48%	0.475	S	S	.	.	T	Hydrogen-bonded Turn	trans	-64.6	10.9	-162.8	28.2	0	0	0	0	116.3	L19	L19-S21 PolarHBondContact O-N 3.34Å; L19-S21 VanDerWaalsContact O-N 3.16Å
22	F	49.6	Very low	54.1	Low	198 Å²	198	84.4 Å²	84.4	87%	0.868	44%	0.444	S	S	*	.	T	Hydrogen-bonded Turn	trans	-156.3	53.1	-174.1	-90.5	-82.7	0	0	0	112.7	P20	P20-F22 PolarHBondContact O-N 3.43Å
23	L	51.8	Low	55.3	Low	54 Å²	54	81.3 Å²	81.3	28%	0.283	42%	0.424	S	S	.	.	S	Bend	trans	-83.1	132.1	147.4	-74.4	168.9	0	0	0	106.2	E27 F28 Y32	L23-E27 HydrophobicContact CD2-CG 4.05Å; L23-F28 HydrophobicContact CB-CB 3.98Å; L23-F28 HydrophobicContact CD1-CD2 4.33Å; L23-Y32 HydrophobicContact CD1-CE2 4.1Å
24	D	62.1	Low	56	Low	95 Å²	95	83.9 Å²	83.9	51%	0.508	43%	0.429	S	S	.	.			trans	-45.5	133.1	166.3	-175.3	-53.7	0	0	0	107.3	L26 E27 F28	D24-L26 PolarHBondContact O-N 3.2Å; D24-L26 VanDerWaalsContact OD1-CB 3.23Å; D24-L26 WeakPolarHBondContact OD1-CB 3.38Å; D24-L26 PolarHBondContact OD1-N 3.44Å; D24-E27 HydrophobicContact CB-CB 3.96Å; D24-E27 WeakPolarHBondContact O-CA 3.44Å; D24-E27 PolarHBondContact O-N 2.87Å; D24-F28 PolarHBondContact O-N 3.28Å
25	P	58.3	Low	56.8	Low	102 Å²	102	80.9 Å²	80.9	66%	0.662	42%	0.419	S	S	*	.	H	α-helix	trans	-46.9	-32.9	178.5	-28.6	34.4	0	0	0	113.2	V29	P25-V29 WeakPolarHBondContact O-CB 3.49Å; P25-V29 WeakPolarHBondContact O-CG2 3.07Å; P25-V29 PolarHBondContact O-N 2.96Å; P25-V29 VanDerWaalsContact O-N 3.09Å
26	L	62.5	Low	57.7	Low	68 Å²	68	78.4 Å²	78.4	36%	0.356	40%	0.404	S	S	.	.	H	α-helix	trans	-71.7	-43.8	176	-163.7	69.5	0	0	0	112.5	D24 V29 I30	D24-L26 PolarHBondContact O-N 3.2Å; D24-L26 VanDerWaalsContact OD1-CB 3.23Å; D24-L26 WeakPolarHBondContact OD1-CB 3.38Å; D24-L26 PolarHBondContact OD1-N 3.44Å; L26-V29 PolarHBondContact O-N 3.28Å; L26-I30 HydrophobicContact CG-CD1 4.12Å; L26-I30 VanDerWaalsContact O-CG1 3.28Å; L26-I30 WeakPolarHBondContact O-CG1 3.45Å; L26-I30 PolarHBondContact O-N 3.47Å
27	E	59.6	Low	58.4	Low	103 Å²	103	77 Å²	77	48%	0.481	40%	0.401	S	S	.	.	H	α-helix	trans	-67.7	-38.5	178.5	-164.5	178.6	-168.4	0	0	111.5	L23 D24 I30 V31	L23-E27 HydrophobicContact CD2-CG 4.05Å; D24-E27 HydrophobicContact CB-CB 3.96Å; D24-E27 WeakPolarHBondContact O-CA 3.44Å; D24-E27 PolarHBondContact O-N 2.87Å; E27-I30 PolarHBondContact O-N 3.41Å; E27-V31 WeakPolarHBondContact O-CB 3.2Å; E27-V31 WeakPolarHBondContact O-CG2 3.27Å; E27-V31 PolarHBondContact O-N 2.99Å; E27-V31 VanDerWaalsContact O-N 3.07Å
28	F	65.4	Low	59.3	Low	25 Å²	25	82.5 Å²	82.5	11%	0.11	42%	0.419	C	S	.	.	H	α-helix	trans	-59.6	-49	170.9	178.7	-99.1	0	0	0	110.9	L5 L19 L23 D24 I30 Y32 W36	L5-F28 HydrophobicContact CD2-CE1 3.8Å; L5-F28 HydrophobicContact CD2-CZ 3.54Å; L19-F28 HydrophobicContact CD1-CE2 3.67Å; L19-F28 HydrophobicContact CD1-CZ 4.02Å; L19-F28 HydrophobicContact CD2-CD2 3.62Å; L19-F28 HydrophobicContact CD2-CE2 3.39Å; L19-F28 HydrophobicContact CD2-CG 4.31Å; L19-F28 HydrophobicContact CD2-CZ 3.88Å; L19-F28 HydrophobicContact CG-CD2 4.12Å; L19-F28 HydrophobicContact CG-CE2 3.63Å; L19-F28 HydrophobicContact CG-CZ 4.33Å; L23-F28 HydrophobicContact CB-CB 3.98Å; L23-F28 HydrophobicContact CD1-CD2 4.33Å; D24-F28 PolarHBondContact O-N 3.28Å; F28-I30 PolarHBondContact O-N 2.86Å; F28-Y32 AromaticContact CD2-CD2 3.35Å; F28-Y32 HydrophobicContact CD2-CD2 3.35Å; F28-Y32 AromaticContact CD2-CE2 3.47Å; F28-Y32 HydrophobicContact CD2-CE2 3.47Å; F28-Y32 VanDerWaalsContact CD2-CE2 3.47Å; F28-Y32 HydrophobicContact CD2-CG 4.18Å; F28-Y32 HydrophobicContact CE2-CD1 4.17Å; F28-Y32 AromaticContact CE2-CD2 3.27Å; F28-Y32 HydrophobicContact CE2-CD2 3.27Å; F28-Y32 HydrophobicContact CE2-CE1 4.25Å; F28-Y32 AromaticContact CE2-CE2 3.37Å; F28-Y32 HydrophobicContact CE2-CE2 3.37Å; F28-Y32 AromaticContact CE2-CG 3.69Å; F28-Y32 HydrophobicContact CE2-CG 3.69Å; F28-Y32 AromaticContact CE2-CZ 3.87Å; F28-Y32 HydrophobicContact CG-CD2 4.13Å; F28-Y32 HydrophobicContact CZ-CD1 4.46Å; F28-Y32 HydrophobicContact CZ-CD2 4.02Å; F28-Y32 HydrophobicContact CZ-CE2 4.44Å; F28-Y32 HydrophobicContact CZ-CG 4.02Å; F28-Y32 VanDerWaalsContact O-CB 3.31Å; F28-Y32 WeakPolarHBondContact O-CB 3.38Å; F28-Y32 WeakPolarHBondContact O-CD2 3.34Å; F28-Y32 PolarHBondContact O-N 3.3Å; F28-W36 HydrophobicContact CE1-CH2 4.41Å; F28-W36 HydrophobicContact CZ-CH2 4.31Å; F28-W36 HydrophobicContact CZ-CZ2 4.44Å
29	V	65.2	Low	60.1	Low	46 Å²	46	81.9 Å²	81.9	28%	0.279	42%	0.415	S	S	.	.	H	α-helix	trans	-60.6	-45.9	179.8	164.6	0	0	0	0	110.7	P25 L26 L33 F52	P25-V29 WeakPolarHBondContact O-CB 3.49Å; P25-V29 WeakPolarHBondContact O-CG2 3.07Å; P25-V29 PolarHBondContact O-N 2.96Å; P25-V29 VanDerWaalsContact O-N 3.09Å; L26-V29 PolarHBondContact O-N 3.28Å; V29-L33 HydrophobicContact CG1-CD1 3.33Å; V29-L33 HydrophobicContact CG1-CG 4.16Å; V29-L33 WeakPolarHBondContact O-CA 3.37Å; V29-L33 WeakPolarHBondContact O-CB 3.41Å; V29-L33 WeakPolarHBondContact O-CD1 3.34Å; V29-L33 WeakPolarHBondContact O-CG 3.27Å; V29-L33 PolarHBondContact O-N 3.38Å; V29-F52 HydrophobicContact CG1-CD1 3.76Å; V29-F52 HydrophobicContact CG1-CE1 3.65Å; V29-F52 HydrophobicContact CG1-CE2 4.44Å; V29-F52 HydrophobicContact CG1-CG 4.22Å; V29-F52 HydrophobicContact CG1-CZ 4.01Å
30	I	63.8	Low	60.6	Low	45 Å²	45	83.1 Å²	83.1	23%	0.231	44%	0.436	C	S	.	.	H	α-helix	trans	-65.2	-53.7	-177.9	-68.4	165	0	0	0	111.7	L26 E27 F28 Y32 L33 E34	L26-I30 HydrophobicContact CG-CD1 4.12Å; L26-I30 VanDerWaalsContact O-CG1 3.28Å; L26-I30 WeakPolarHBondContact O-CG1 3.45Å; L26-I30 PolarHBondContact O-N 3.47Å; E27-I30 PolarHBondContact O-N 3.41Å; F28-I30 PolarHBondContact O-N 2.86Å; I30-Y32 PolarHBondContact O-N 2.99Å; I30-L33 PolarHBondContact O-N 2.93Å; I30-E34 PolarHBondContact O-N 3.01Å; I30-E34 VanDerWaalsContact O-N 3.1Å
31	V	61.8	Low	61.3	Low	70 Å²	70	82.5 Å²	82.5	42%	0.424	43%	0.428	S	S	.	.	H	α-helix	trans	-65.4	-42.3	-174.8	173.3	0	0	0	0	111.5	E27 T35	E27-V31 WeakPolarHBondContact O-CB 3.2Å; E27-V31 WeakPolarHBondContact O-CG2 3.27Å; E27-V31 PolarHBondContact O-N 2.99Å; E27-V31 VanDerWaalsContact O-N 3.07Å; V31-T35 PolarHBondContact O-N 2.82Å; V31-T35 PolarHBondContact O-OG1 3.32Å
32	Y	63.7	Low	61.8	Low	58 Å²	58	83 Å²	83	23%	0.227	42%	0.42	C	S	.	.	H	α-helix	trans	-80.2	-33	-178.9	-75	-93.9	0	0	0	112.3	L23 F28 I30 T35 W36	L23-Y32 HydrophobicContact CD1-CE2 4.1Å; F28-Y32 AromaticContact CD2-CD2 3.35Å; F28-Y32 HydrophobicContact CD2-CD2 3.35Å; F28-Y32 AromaticContact CD2-CE2 3.47Å; F28-Y32 HydrophobicContact CD2-CE2 3.47Å; F28-Y32 VanDerWaalsContact CD2-CE2 3.47Å; F28-Y32 HydrophobicContact CD2-CG 4.18Å; F28-Y32 HydrophobicContact CE2-CD1 4.17Å; F28-Y32 AromaticContact CE2-CD2 3.27Å; F28-Y32 HydrophobicContact CE2-CD2 3.27Å; F28-Y32 HydrophobicContact CE2-CE1 4.25Å; F28-Y32 AromaticContact CE2-CE2 3.37Å; F28-Y32 HydrophobicContact CE2-CE2 3.37Å; F28-Y32 AromaticContact CE2-CG 3.69Å; F28-Y32 HydrophobicContact CE2-CG 3.69Å; F28-Y32 AromaticContact CE2-CZ 3.87Å; F28-Y32 HydrophobicContact CG-CD2 4.13Å; F28-Y32 HydrophobicContact CZ-CD1 4.46Å; F28-Y32 HydrophobicContact CZ-CD2 4.02Å; F28-Y32 HydrophobicContact CZ-CE2 4.44Å; F28-Y32 HydrophobicContact CZ-CG 4.02Å; F28-Y32 VanDerWaalsContact O-CB 3.31Å; F28-Y32 WeakPolarHBondContact O-CB 3.38Å; F28-Y32 WeakPolarHBondContact O-CD2 3.34Å; F28-Y32 PolarHBondContact O-N 3.3Å; I30-Y32 PolarHBondContact O-N 2.99Å; Y32-T35 PolarHBondContact O-N 3.17Å; Y32-W36 AromaticContact CD1-CZ2 3.91Å; Y32-W36 HydrophobicContact CD1-CZ2 3.91Å; Y32-W36 AromaticContact CD1-NE1 3.79Å; Y32-W36 HydrophobicContact CG-CZ2 4.22Å; Y32-W36 VanDerWaalsContact O-CB 3.27Å; Y32-W36 WeakPolarHBondContact O-CB 3.33Å; Y32-W36 VanDerWaalsContact O-CD1 3.31Å; Y32-W36 PolarHBondContact O-N 3.47Å
33	L	65.8	Low	62.1	Low	21 Å²	21	81.6 Å²	81.6	11%	0.11	42%	0.422	C	S	.	.	H	α-helix	trans	-59.9	-50.3	172.5	-85.7	170.3	0	0	0	111.1	V29 I30 T35 W36 V37 L44 F52	V29-L33 HydrophobicContact CG1-CD1 3.33Å; V29-L33 HydrophobicContact CG1-CG 4.16Å; V29-L33 WeakPolarHBondContact O-CA 3.37Å; V29-L33 WeakPolarHBondContact O-CB 3.41Å; V29-L33 WeakPolarHBondContact O-CD1 3.34Å; V29-L33 WeakPolarHBondContact O-CG 3.27Å; V29-L33 PolarHBondContact O-N 3.38Å; I30-L33 PolarHBondContact O-N 2.93Å; L33-T35 VanDerWaalsContact C-N 3.26Å; L33-T35 PolarHBondContact O-N 2.85Å; L33-W36 PolarHBondContact O-N 3.3Å; L33-V37 WeakPolarHBondContact O-CB 3.11Å; L33-V37 WeakPolarHBondContact O-CG2 3.35Å; L33-V37 PolarHBondContact O-N 3.09Å; L33-L44 HydrophobicContact CD2-CD1 3.31Å; L33-L44 HydrophobicContact CD2-CD2 3.76Å; L33-L44 HydrophobicContact CD2-CG 4.17Å; L33-F52 HydrophobicContact CD1-CD2 3.41Å; L33-F52 VanDerWaalsContact CD1-CD2 3.41Å; L33-F52 HydrophobicContact CD1-CE2 3.56Å; L33-F52 HydrophobicContact CD1-CG 3.98Å; L33-F52 HydrophobicContact CD1-CZ 4.23Å
34	E	62.8	Low	62.4	Low	132 Å²	132	80.4 Å²	80.4	62%	0.617	42%	0.416	S	S	*	.	H	α-helix	trans	-59.1	-43	-178.9	-165.6	178.4	-167.1	0	0	110.9	I30 Y38	I30-E34 PolarHBondContact O-N 3.01Å; I30-E34 VanDerWaalsContact O-N 3.1Å; E34-Y38 WeakPolarHBondContact O-CB 3.48Å; E34-Y38 PolarHBondContact O-N 3.17Å
35	T	65.1	Low	62.3	Low	60 Å²	60	84.8 Å²	84.8	37%	0.368	43%	0.425	S	S	.	.	H	α-helix	trans	-65.2	-41.8	176.9	-58	0	0	0	0	112.6	V31 Y32 L33 K39	V31-T35 PolarHBondContact O-N 2.82Å; V31-T35 PolarHBondContact O-OG1 3.32Å; Y32-T35 PolarHBondContact O-N 3.17Å; L33-T35 VanDerWaalsContact C-N 3.26Å; L33-T35 PolarHBondContact O-N 2.85Å; T35-K39 HydrophobicContact CG2-CD 4.33Å; T35-K39 WeakPolarHBondContact O-CB 3.49Å; T35-K39 WeakPolarHBondContact O-CG 3.08Å; T35-K39 PolarHBondContact O-N 3.04Å
36	W	66.4	Low	62.3	Low	39 Å²	39	84.2 Å²	84.2	15%	0.148	42%	0.422	C	S	.	.	H	α-helix	trans	-72.9	-35	-178.7	-64.4	-11.3	0	0	0	112.2	I7 F28 Y32 L33 K39 G40 L41 F42	I7-W36 HydrophobicContact CD1-CH2 3.89Å; I7-W36 HydrophobicContact CD1-CZ2 3.49Å; I7-W36 VanDerWaalsContact CD1-CZ2 3.49Å; I7-W36 HydrophobicContact CG1-CH2 4.39Å; I7-W36 HydrophobicContact CG1-CZ2 4.44Å; F28-W36 HydrophobicContact CE1-CH2 4.41Å; F28-W36 HydrophobicContact CZ-CH2 4.31Å; F28-W36 HydrophobicContact CZ-CZ2 4.44Å; Y32-W36 AromaticContact CD1-CZ2 3.91Å; Y32-W36 HydrophobicContact CD1-CZ2 3.91Å; Y32-W36 AromaticContact CD1-NE1 3.79Å; Y32-W36 HydrophobicContact CG-CZ2 4.22Å; Y32-W36 VanDerWaalsContact O-CB 3.27Å; Y32-W36 WeakPolarHBondContact O-CB 3.33Å; Y32-W36 VanDerWaalsContact O-CD1 3.31Å; Y32-W36 PolarHBondContact O-N 3.47Å; L33-W36 PolarHBondContact O-N 3.3Å; W36-K39 PolarHBondContact O-N 3.32Å; W36-G40 PolarHBondContact O-N 3.4Å; W36-L41 HydrophobicContact CB-CB 4.22Å; W36-L41 HydrophobicContact CB-CD1 4.5Å; W36-L41 HydrophobicContact CG-CD1 4.41Å; W36-L41 WeakPolarHBondContact O-CB 3.37Å; W36-L41 PolarHBondContact O-N 3.48Å; W36-F42 HydrophobicContact CB-CD2 4.08Å; W36-F42 HydrophobicContact CD2-CD2 4.42Å; W36-F42 HydrophobicContact CD2-CE2 4.31Å; W36-F42 AromaticContact CE3-CD2 3.94Å; W36-F42 HydrophobicContact CE3-CD2 3.94Å; W36-F42 AromaticContact CE3-CE2 3.72Å; W36-F42 HydrophobicContact CE3-CE2 3.72Å; W36-F42 HydrophobicContact CZ3-CE2 4.24Å
37	V	64.7	Low	62.1	Low	49 Å²	49	87 Å²	87	30%	0.297	43%	0.433	S	S	.	.	H	α-helix	trans	-65.7	-47.6	171.8	173.4	0	0	0	0	110.6	L33 K39 G40 L44	L33-V37 WeakPolarHBondContact O-CB 3.11Å; L33-V37 WeakPolarHBondContact O-CG2 3.35Å; L33-V37 PolarHBondContact O-N 3.09Å; V37-K39 PolarHBondContact O-N 3.28Å; V37-G40 PolarHBondContact O-N 3.31Å; V37-L44 HydrophobicContact CG2-CB 3.58Å; V37-L44 HydrophobicContact CG2-CD1 3.85Å; V37-L44 HydrophobicContact CG2-CD2 4.3Å; V37-L44 HydrophobicContact CG2-CG 4.11Å
38	Y	62.7	Low	62.2	Low	213 Å²	213	85.9 Å²	85.9	84%	0.835	43%	0.43	S	S	*	.	H	α-helix	trans	-60.2	-35.6	177.5	-174.9	-96.6	0	0	0	112.6	E34 G40	E34-Y38 WeakPolarHBondContact O-CB 3.48Å; E34-Y38 PolarHBondContact O-N 3.17Å; Y38-G40 VanDerWaalsContact C-N 3.26Å; Y38-G40 PolarHBondContact O-N 3.03Å
39	K	63.1	Low	62.2	Low	144 Å²	144	87.3 Å²	87.3	63%	0.626	44%	0.438	S	S	*	.	T	Hydrogen-bonded Turn	trans	-80.9	-0.2	176	-71	-174.5	176.3	-171.7	0	114.1	T35 W36 V37 L41	T35-K39 HydrophobicContact CG2-CD 4.33Å; T35-K39 WeakPolarHBondContact O-CB 3.49Å; T35-K39 WeakPolarHBondContact O-CG 3.08Å; T35-K39 PolarHBondContact O-N 3.04Å; W36-K39 PolarHBondContact O-N 3.32Å; V37-K39 PolarHBondContact O-N 3.28Å; K39-L41 HydrophobicContact CB-CD1 3.89Å; K39-L41 HydrophobicContact CB-CG 3.82Å; K39-L41 HydrophobicContact CD-CD1 4.23Å; K39-L41 PolarHBondContact O-N 2.81Å
40	G	61.7	Low	62.1	Low	63 Å²	63	89.8 Å²	89.8	65%	0.649	45%	0.45	S	S	*	.	T	Hydrogen-bonded Turn	trans	64.7	21.4	-178.1	0	0	0	0	0	113.8	W36 V37 Y38 F42	W36-G40 PolarHBondContact O-N 3.4Å; V37-G40 PolarHBondContact O-N 3.31Å; Y38-G40 VanDerWaalsContact C-N 3.26Å; Y38-G40 PolarHBondContact O-N 3.03Å; G40-F42 VanDerWaalsContact C-N 3.33Å
41	L	61.7	Low	62.2	Low	70 Å²	70	94 Å²	94	37%	0.366	46%	0.464	S	S	.	.	S	Bend	trans	-77.3	-23.5	-178	-68.2	173.4	0	0	0	112.2	Y9 W36 K39	Y9-L41 HydrophobicContact CD1-CB 4.26Å; Y9-L41 HydrophobicContact CD1-CD2 4.32Å; Y9-L41 HydrophobicContact CE1-CB 3.63Å; Y9-L41 HydrophobicContact CE1-CD1 4.28Å; Y9-L41 HydrophobicContact CE1-CD2 4.17Å; Y9-L41 HydrophobicContact CE1-CG 4.24Å; W36-L41 HydrophobicContact CB-CB 4.22Å; W36-L41 HydrophobicContact CB-CD1 4.5Å; W36-L41 HydrophobicContact CG-CD1 4.41Å; W36-L41 WeakPolarHBondContact O-CB 3.37Å; W36-L41 PolarHBondContact O-N 3.48Å; K39-L41 HydrophobicContact CB-CD1 3.89Å; K39-L41 HydrophobicContact CB-CG 3.82Å; K39-L41 HydrophobicContact CD-CD1 4.23Å; K39-L41 PolarHBondContact O-N 2.81Å
42	F	59.6	Low	62.2	Low	87 Å²	87	93 Å²	93	38%	0.382	45%	0.453	S	S	.	.	S	Bend	trans	-138.3	136.3	170.7	-72.7	-82.1	0	0	0	109.7	Y9 W36 G40 L44	Y9-F42 HydrophobicContact CD1-CE2 4.25Å; Y9-F42 HydrophobicContact CD1-CZ 4.33Å; Y9-F42 HydrophobicContact CE1-CD2 4.05Å; Y9-F42 AromaticContact CE1-CE2 3.4Å; Y9-F42 HydrophobicContact CE1-CE2 3.4Å; Y9-F42 AromaticContact CE1-CZ 3.86Å; Y9-F42 HydrophobicContact CE1-CZ 3.86Å; W36-F42 HydrophobicContact CB-CD2 4.08Å; W36-F42 HydrophobicContact CD2-CD2 4.42Å; W36-F42 HydrophobicContact CD2-CE2 4.31Å; W36-F42 AromaticContact CE3-CD2 3.94Å; W36-F42 HydrophobicContact CE3-CD2 3.94Å; W36-F42 AromaticContact CE3-CE2 3.72Å; W36-F42 HydrophobicContact CE3-CE2 3.72Å; W36-F42 HydrophobicContact CZ3-CE2 4.24Å; G40-F42 VanDerWaalsContact C-N 3.33Å; F42-L44 HydrophobicContact CB-CD1 4.05Å; F42-L44 PolarHBondContact O-N 2.99Å
43	D	56.1	Low	62.2	Low	170 Å²	170	94.9 Å²	94.9	91%	0.909	47%	0.467	S	S	*	.			trans	-81.6	77.7	169.3	-136.9	-5.6	0	0	0	107.5	R45	D43-R45 PolarHBondContact O-N 2.85Å
44	L	59.1	Low	62.1	Low	29 Å²	29	99.9 Å²	99.9	15%	0.152	49%	0.494	C	S	.	.			trans	-71.8	118.3	172.9	-115.1	90.2	0	0	0	108.1	L33 V37 F42 L48 L49	L33-L44 HydrophobicContact CD2-CD1 3.31Å; L33-L44 HydrophobicContact CD2-CD2 3.76Å; L33-L44 HydrophobicContact CD2-CG 4.17Å; V37-L44 HydrophobicContact CG2-CB 3.58Å; V37-L44 HydrophobicContact CG2-CD1 3.85Å; V37-L44 HydrophobicContact CG2-CD2 4.3Å; V37-L44 HydrophobicContact CG2-CG 4.11Å; F42-L44 HydrophobicContact CB-CD1 4.05Å; F42-L44 PolarHBondContact O-N 2.99Å; L44-L48 HydrophobicContact CD2-CB 4.01Å; L44-L48 HydrophobicContact CD2-CD2 4.1Å; L44-L48 HydrophobicContact CG-CB 4.44Å; L44-L48 HydrophobicContact CG-CD2 4.19Å; L44-L49 HydrophobicContact CD2-CB 4.27Å; L44-L49 HydrophobicContact CD2-CD1 4.44Å
45	R	60.3	Low	61.8	Low	186 Å²	186	97.9 Å²	97.9	70%	0.702	49%	0.486	S	S	*	.			trans	-53.2	126.4	164.2	-71.4	-168	-66.2	174	-0.8	108.6	D43 E47 L48	D43-R45 PolarHBondContact O-N 2.85Å; R45-E47 WeakPolarHBondContact CB-OE2 2.98Å; R45-E47 PolarHBondContact O-N 3.47Å; R45-L48 WeakPolarHBondContact O-CB 3.33Å; R45-L48 PolarHBondContact O-N 3.46Å
46	P	58.2	Low	61.2	Low	90 Å²	90	105.5 Å²	105.5	58%	0.584	52%	0.517	S	S	*	.	H	α-helix	trans	-50.6	-30	-175.7	-28.4	34	0	0	0	114.2	L48 L49 L50	P46-L48 VanDerWaalsContact C-N 3.29Å; P46-L48 PolarHBondContact O-N 3.06Å; P46-L49 WeakPolarHBondContact O-CB 3.31Å; P46-L49 PolarHBondContact O-N 3.1Å; P46-L50 PolarHBondContact O-N 3.07Å
47	E	57.7	Low	61	Low	128 Å²	128	108.9 Å²	108.9	60%	0.598	54%	0.535	S	S	*	.	H	α-helix	trans	-63.8	-32.5	177.4	-56.9	86.3	167.8	0	0	112.8	R45 Y51	R45-E47 WeakPolarHBondContact CB-OE2 2.98Å; R45-E47 PolarHBondContact O-N 3.47Å; E47-Y51 WeakPolarHBondContact O-CB 3.31Å; E47-Y51 PolarHBondContact O-N 3.47Å
48	L	62.2	Low	60.8	Low	78 Å²	78	112 Å²	112	41%	0.408	55%	0.548	S	S	.	.	H	α-helix	trans	-74.6	-37.3	177.8	-146.4	86.1	0	0	0	110.9	L44 R45 P46 Y51 F52	L44-L48 HydrophobicContact CD2-CB 4.01Å; L44-L48 HydrophobicContact CD2-CD2 4.1Å; L44-L48 HydrophobicContact CG-CB 4.44Å; L44-L48 HydrophobicContact CG-CD2 4.19Å; R45-L48 WeakPolarHBondContact O-CB 3.33Å; R45-L48 PolarHBondContact O-N 3.46Å; P46-L48 VanDerWaalsContact C-N 3.29Å; P46-L48 PolarHBondContact O-N 3.06Å; L48-Y51 WeakPolarHBondContact O-CB 3.23Å; L48-Y51 PolarHBondContact O-N 3.17Å; L48-F52 HydrophobicContact CD2-CE2 4.03Å; L48-F52 HydrophobicContact CG-CE2 4.07Å; L48-F52 WeakPolarHBondContact O-CD2 3.37Å; L48-F52 PolarHBondContact O-N 2.92Å; L48-F52 VanDerWaalsContact O-N 3.17Å
49	L	64.5	Low	60.6	Low	56 Å²	56	106.4 Å²	106.4	29%	0.293	53%	0.532	S	S	.	.	H	α-helix	trans	-63.4	-46	173.6	-170	78.3	0	0	0	110.3	L44 P46 Y51 F52 L53	L44-L49 HydrophobicContact CD2-CB 4.27Å; L44-L49 HydrophobicContact CD2-CD1 4.44Å; P46-L49 WeakPolarHBondContact O-CB 3.31Å; P46-L49 PolarHBondContact O-N 3.1Å; L49-Y51 VanDerWaalsContact C-N 3.3Å; L49-Y51 PolarHBondContact O-N 2.84Å; L49-F52 PolarHBondContact O-N 3.28Å; L49-L53 HydrophobicContact CD2-CD1 4.46Å; L49-L53 HydrophobicContact CG-CD1 4.14Å; L49-L53 WeakPolarHBondContact O-CG 3.45Å; L49-L53 PolarHBondContact O-N 3.46Å
50	L	64	Low	60.5	Low	98 Å²	98	104.2 Å²	104.2	51%	0.513	53%	0.526	S	S	.	.	H	α-helix	trans	-59.4	-39.2	174.4	-79.4	162.8	0	0	0	112.4	P46 L53 N54	P46-L50 PolarHBondContact O-N 3.07Å; L50-L53 PolarHBondContact O-N 2.87Å; L50-N54 VanDerWaalsContact O-CB 3.31Å; L50-N54 WeakPolarHBondContact O-CB 3.49Å; L50-N54 VanDerWaalsContact O-CG 3.31Å; L50-N54 PolarHBondContact O-N 3.32Å; L50-N54 PolarHBondContact O-ND2 3.42Å
51	Y	65.3	Low	60.4	Low	134 Å²	134	106.8 Å²	106.8	53%	0.525	52%	0.518	S	S	.	.	H	α-helix	trans	-61.2	-46.9	176.4	174.9	-101.8	0	0	0	112	E47 L48 L49 N54 M55	E47-Y51 WeakPolarHBondContact O-CB 3.31Å; E47-Y51 PolarHBondContact O-N 3.47Å; L48-Y51 WeakPolarHBondContact O-CB 3.23Å; L48-Y51 PolarHBondContact O-N 3.17Å; L49-Y51 VanDerWaalsContact C-N 3.3Å; L49-Y51 PolarHBondContact O-N 2.84Å; Y51-N54 PolarHBondContact O-N 2.96Å; Y51-M55 HydrophobicContact CE1-CE 3.57Å; Y51-M55 HydrophobicContact CE1-CG 4.36Å; Y51-M55 HydrophobicContact CE1-SD 4.16Å; Y51-M55 HydrophobicContact CE2-CG 4.37Å; Y51-M55 HydrophobicContact CE2-SD 4.18Å; Y51-M55 VanDerWaalsContact O-CG 3.27Å; Y51-M55 WeakPolarHBondContact O-CG 3.48Å; Y51-M55 PolarHBondContact O-N 2.86Å; Y51-M55 WeakPolarHBondContact OH-CE 3.28Å; Y51-M55 PolarHBondContact OH-SD 2.87Å
52	F	61.3	Low	60.3	Low	48 Å²	48	109.2 Å²	109.2	21%	0.211	53%	0.528	C	S	.	.	H	α-helix	trans	-67	-38.9	178	-73	-64.8	0	0	0	112.9	V29 L33 L48 L49 N54 M55	V29-F52 HydrophobicContact CG1-CD1 3.76Å; V29-F52 HydrophobicContact CG1-CE1 3.65Å; V29-F52 HydrophobicContact CG1-CE2 4.44Å; V29-F52 HydrophobicContact CG1-CG 4.22Å; V29-F52 HydrophobicContact CG1-CZ 4.01Å; L33-F52 HydrophobicContact CD1-CD2 3.41Å; L33-F52 VanDerWaalsContact CD1-CD2 3.41Å; L33-F52 HydrophobicContact CD1-CE2 3.56Å; L33-F52 HydrophobicContact CD1-CG 3.98Å; L33-F52 HydrophobicContact CD1-CZ 4.23Å; L48-F52 HydrophobicContact CD2-CE2 4.03Å; L48-F52 HydrophobicContact CG-CE2 4.07Å; L48-F52 WeakPolarHBondContact O-CD2 3.37Å; L48-F52 PolarHBondContact O-N 2.92Å; L48-F52 VanDerWaalsContact O-N 3.17Å; L49-F52 PolarHBondContact O-N 3.28Å; F52-N54 VanDerWaalsContact C-N 3.27Å; F52-N54 PolarHBondContact O-N 3.39Å; F52-M55 PolarHBondContact O-N 2.76Å
53	L	63.3	Low	60.4	Low	98 Å²	98	110.8 Å²	110.8	51%	0.513	54%	0.539	S	S	.	.	H	α-helix	trans	-66.4	-27.6	176.1	-70.5	171.2	0	0	0	113.1	L49 L50	L49-L53 HydrophobicContact CD2-CD1 4.46Å; L49-L53 HydrophobicContact CG-CD1 4.14Å; L49-L53 WeakPolarHBondContact O-CG 3.45Å; L49-L53 PolarHBondContact O-N 3.46Å; L50-L53 PolarHBondContact O-N 2.87Å
54	N	64.2	Low	60.7	Low	125 Å²	125	106.2 Å²	106.2	67%	0.668	51%	0.51	S	S	*	.	H	α-helix	trans	-90.2	-6.4	-179.4	-77.5	-51	0	0	0	114.3	L50 Y51 F52 H56	L50-N54 VanDerWaalsContact O-CB 3.31Å; L50-N54 WeakPolarHBondContact O-CB 3.49Å; L50-N54 VanDerWaalsContact O-CG 3.31Å; L50-N54 PolarHBondContact O-N 3.32Å; L50-N54 PolarHBondContact O-ND2 3.42Å; Y51-N54 PolarHBondContact O-N 2.96Å; F52-N54 VanDerWaalsContact C-N 3.27Å; F52-N54 PolarHBondContact O-N 3.39Å; N54-H56 PolarHBondContact O-N 3.16Å
55	M	57.6	Low	60.9	Low	91 Å²	91	112.7 Å²	112.7	45%	0.448	54%	0.54	S	S	.	.			trans	-81.3	21.4	177	-71.9	-120.3	-84.2	0	0	113.1	Y51 F52	Y51-M55 HydrophobicContact CE1-CE 3.57Å; Y51-M55 HydrophobicContact CE1-CG 4.36Å; Y51-M55 HydrophobicContact CE1-SD 4.16Å; Y51-M55 HydrophobicContact CE2-CG 4.37Å; Y51-M55 HydrophobicContact CE2-SD 4.18Å; Y51-M55 VanDerWaalsContact O-CG 3.27Å; Y51-M55 WeakPolarHBondContact O-CG 3.48Å; Y51-M55 PolarHBondContact O-N 2.86Å; Y51-M55 WeakPolarHBondContact OH-CE 3.28Å; Y51-M55 PolarHBondContact OH-SD 2.87Å; F52-M55 PolarHBondContact O-N 2.76Å
56	H	52.1	Low	60.9	Low	220 Å²	220	106 Å²	106	100%	1.019	53%	0.526	S	S	*	.			trans	-92.4	0	-173	-141.3	-44.4	0	0	0	113.7	N54	N54-H56 PolarHBondContact O-N 3.16Å

Retrieved 56 of 56 residues in 181.7 ms (Link to these results)

U.S. Privacy Notice - Disclaimer / Registrations / Copyright Statement - Linking Policy - Notice of Privacy Practices (HIPAA) - Notice of Non‑Discrimination
© Copyright 2026 St. Jude Children's Research Hospital, a not-for-profit, section 501(c)(3).