A0A087WQM3_MOUSE Loading...

Ribulose-5-phosphate-3-epimerase

AlphaFold DB , UniProt , Accession A0A087WQM3, Species MOUSE (Mus musculus, Mouse), Gene Rpe, Length 50 aa.

						>A0A087WQM3_MOUSE|A0A087WQM3|Rpe
MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDAPCSSGRYAHDGV
					

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(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	37.6	Very low	43.5	Very low	240 Å²	240	124.5 Å²	124.5	100%	1.182	77%	0.773	S	S	*	*				0	118.7	0	-78.2	85.8	162.2	0	0	108.6	S3	M1-S3 PolarHBondContact O-N 3.14Å
2	A	33.4	Very low	43.7	Very low	105 Å²	105	128.9 Å²	128.9	87%	0.868	79%	0.787	S	S	*	*			trans	-70.7	108.9	174.5	0	0	0	0	0	108.6	G4	A2-G4 PolarHBondContact O-N 3.4Å
3	S	42.3	Very low	44.1	Very low	110 Å²	110	130.2 Å²	130.2	77%	0.769	79%	0.786	S	S	*	*			trans	-62.5	106.6	168.4	52.1	0	0	0	0	107.3	M1 C5	M1-S3 PolarHBondContact O-N 3.14Å; S3-C5 PolarHBondContact O-N 2.85Å
4	G	41	Very low	44.1	Very low	62 Å²	62	127.4 Å²	127.4	64%	0.639	78%	0.775	S	S	*	*			trans	-45.6	125	178.4	0	0	0	0	0	110	A2 K6	A2-G4 PolarHBondContact O-N 3.4Å; G4-K6 PolarHBondContact O-N 3.35Å
5	C	41	Very low	44.6	Very low	118 Å²	118	127.5 Å²	127.5	80%	0.797	77%	0.77	S	S	*	*			trans	-55.2	103	178.9	-58.9	0	0	0	0	108.3	S3 I7	S3-C5 PolarHBondContact O-N 2.85Å; C5-I7 VanDerWaalsContact C-N 3.28Å; C5-I7 PolarHBondContact O-N 2.58Å
6	K	49.1	Very low	45	Very low	204 Å²	204	127.9 Å²	127.9	89%	0.887	77%	0.765	S	S	*	*			trans	-72.5	92.7	170.5	-66.4	-179.8	-176.9	176.8	0	105.9	G4 G8	G4-K6 PolarHBondContact O-N 3.35Å; K6-G8 PolarHBondContact O-N 3.44Å
7	I	42.6	Very low	45.5	Very low	147 Å²	147	125.1 Å²	125.1	75%	0.754	76%	0.759	S	S	*	*			trans	-65.4	95	164.3	-56.4	-60.5	0	0	0	105.2	C5 P9	C5-I7 VanDerWaalsContact C-N 3.28Å; C5-I7 PolarHBondContact O-N 2.58Å; I7-P9 WeakPolarHBondContact O-CD 3.32Å
8	G	52.5	Low	45.8	Very low	62 Å²	62	124.4 Å²	124.4	64%	0.639	75%	0.751	S	S	*	*			trans	-76.5	105.4	166.4	0	0	0	0	0	106.9	K6 S10	K6-G8 PolarHBondContact O-N 3.44Å; G8-S10 PolarHBondContact O-N 2.77Å
9	P	47.7	Very low	46.2	Very low	100 Å²	100	122.9 Å²	122.9	65%	0.649	74%	0.738	S	S	*	*			trans	-58.3	136	164.2	28.1	-32.4	0	0	0	106.6	I7 I11	I7-P9 WeakPolarHBondContact O-CD 3.32Å; P9-I11 WeakPolarHBondContact O-CG1 3.46Å; P9-I11 PolarHBondContact O-N 3.23Å
10	S	43.4	Very low	46.7	Very low	101 Å²	101	119.1 Å²	119.1	71%	0.706	73%	0.725	S	S	*	*			trans	-57.2	95.3	-178.9	31.8	0	0	0	0	110.9	G8 L12 N13	G8-S10 PolarHBondContact O-N 2.77Å; S10-L12 PolarHBondContact O-N 3.31Å; S10-N13 PolarHBondContact O-N 3.25Å
11	I	47.7	Very low	47.1	Very low	120 Å²	120	115.7 Å²	115.7	62%	0.615	71%	0.709	S	S	*	*	T	Hydrogen-bonded Turn	trans	-68.4	7.1	-178.4	-32.8	-177.2	0	0	0	112.5	P9 N13	P9-I11 WeakPolarHBondContact O-CG1 3.46Å; P9-I11 PolarHBondContact O-N 3.23Å; I11-N13 VanDerWaalsContact C-N 3.33Å
12	L	46	Very low	47.8	Very low	178 Å²	178	108.1 Å²	108.1	93%	0.932	67%	0.67	S	S	*	*	T	Hydrogen-bonded Turn	trans	-81.6	-7.8	173.3	-70	176.1	0	0	0	113.5	S10	S10-L12 PolarHBondContact O-N 3.31Å
13	N	48.7	Very low	48.7	Very low	146 Å²	146	106.2 Å²	106.2	78%	0.781	65%	0.65	S	S	*	*	S	Bend	trans	-141.4	13.5	-175.4	-162.5	79	0	0	0	115.7	S10 I11	S10-N13 PolarHBondContact O-N 3.25Å; I11-N13 VanDerWaalsContact C-N 3.33Å
14	S	44.8	Very low	49.3	Very low	90 Å²	90	106.9 Å²	106.9	63%	0.629	64%	0.644	S	S	*	*	S	Bend	trans	-141.8	98.3	178.7	-65.2	0	0	0	0	111.1	L16	S14-L16 PolarHBondContact O-N 3.39Å
15	D	51.6	Low	49.8	Very low	130 Å²	130	112.1 Å²	112.1	70%	0.695	65%	0.645	S	S	*	*			trans	33.1	77	149	-121.4	-83.2	0	0	0	116.2	A17 N18	D15-A17 PolarHBondContact O-N 3Å; D15-A17 WeakPolarHBondContact OD1-CB 3.5Å; D15-N18 PolarHBondContact O-N 3.27Å
16	L	50.2	Low	50.2	Low	133 Å²	133	113.8 Å²	113.8	70%	0.696	64%	0.642	S	S	*	*	T	Hydrogen-bonded Turn	trans	-56.4	-17.2	170.9	-172.9	63	0	0	0	112.7	S14 N18	S14-L16 PolarHBondContact O-N 3.39Å; L16-N18 PolarHBondContact O-N 3.19Å; L16-N18 VanDerWaalsContact C-N 3.29Å
17	A	53.3	Low	50.3	Low	81 Å²	81	110.1 Å²	110.1	67%	0.669	63%	0.632	S	S	*	*	H	α-helix	trans	-69.5	-23.4	-179.9	0	0	0	0	0	113.4	D15	D15-A17 PolarHBondContact O-N 3Å; D15-A17 WeakPolarHBondContact OD1-CB 3.5Å
18	N	51	Low	50.5	Low	113 Å²	113	110 Å²	110	60%	0.604	63%	0.633	S	S	*	*	H	α-helix	trans	-93.8	-15.5	-178.2	-151.4	40.8	0	0	0	113.7	D15 L16	D15-N18 PolarHBondContact O-N 3.27Å; L16-N18 PolarHBondContact O-N 3.19Å; L16-N18 VanDerWaalsContact C-N 3.29Å
19	L	53.8	Low	50.2	Low	96 Å²	96	112 Å²	112	50%	0.503	64%	0.637	S	S	.	*	H	α-helix	trans	-74.1	-32.4	175.1	-172.2	63.7	0	0	0	111.7	A21 E22 C23	L19-A21 VanDerWaalsContact C-N 3.33Å; L19-A21 PolarHBondContact O-N 3.06Å; L19-E22 PolarHBondContact O-N 3.44Å; L19-C23 PolarHBondContact O-N 3.33Å; L19-C23 PolarHBondContact O-SG 3.45Å
20	G	56	Low	50.2	Low	46 Å²	46	110.3 Å²	110.3	47%	0.474	64%	0.637	S	S	.	*	H	α-helix	trans	-63.3	-36.8	176.1	0	0	0	0	0	113.2	L24	G20-L24 PolarHBondContact O-N 3.45Å
21	A	54.9	Low	50.1	Low	47 Å²	47	109.1 Å²	109.1	39%	0.388	63%	0.634	S	S	.	*	H	α-helix	trans	-69.2	-37.4	176.9	0	0	0	0	0	112.2	L19 L24 R25	L19-A21 VanDerWaalsContact C-N 3.33Å; L19-A21 PolarHBondContact O-N 3.06Å; A21-L24 PolarHBondContact O-N 3.1Å; A21-R25 PolarHBondContact O-N 3.23Å
22	E	52.8	Low	50.3	Low	82 Å²	82	109.8 Å²	109.8	38%	0.383	64%	0.639	S	S	.	*	H	α-helix	trans	-71	-37.9	174	-73.7	-53.7	82.9	0	0	113.2	L19 L24 R25 M26	L19-E22 PolarHBondContact O-N 3.44Å; E22-L24 VanDerWaalsContact C-N 3.29Å; E22-L24 PolarHBondContact O-N 2.79Å; E22-R25 PolarHBondContact OE2-NH2 3.02Å; E22-R25 PolarHBondContact O-N 3.4Å; E22-R25 IonicContact OE2-NH2 3.44Å; E22-R25 PolarHBondContact OE1-NH2 2.96Å; E22-R25 IonicContact OE1-NH2 2.58Å; E22-R25 IonicContact OE1-NE 2.77Å; E22-R25 IonicContact OE1-CZ 3.04Å; E22-R25 VanDerWaalsContact CD-NH2 3.33Å; E22-R25 PolarHBondContact OE1-NE 3.46Å; E22-M26 PolarHBondContact O-N 2.93Å; E22-M26 VanDerWaalsContact O-N 3.1Å
23	C	53.1	Low	50.4	Low	64 Å²	64	111.5 Å²	111.5	43%	0.432	63%	0.634	S	S	.	*	H	α-helix	trans	-62.7	-37.8	173.3	-77.2	0	0	0	0	111.8	L19 M26 L27	L19-C23 PolarHBondContact O-N 3.33Å; L19-C23 PolarHBondContact O-SG 3.45Å; C23-M26 PolarHBondContact O-N 3.18Å; C23-L27 WeakPolarHBondContact O-CB 3.45Å; C23-L27 WeakPolarHBondContact O-CD1 3.08Å; C23-L27 VanDerWaalsContact O-CG 3.32Å; C23-L27 WeakPolarHBondContact O-CG 3.46Å; C23-L27 PolarHBondContact O-N 2.84Å
24	L	53.1	Low	50.1	Low	124 Å²	124	112.2 Å²	112.2	65%	0.649	64%	0.637	S	S	*	*	H	α-helix	trans	-67	-36.8	178.1	-165.2	65.3	0	0	0	112	G20 A21 E22 L27 D28	G20-L24 PolarHBondContact O-N 3.45Å; A21-L24 PolarHBondContact O-N 3.1Å; E22-L24 VanDerWaalsContact C-N 3.29Å; E22-L24 PolarHBondContact O-N 2.79Å; L24-L27 PolarHBondContact O-N 3.11Å; L24-D28 PolarHBondContact O-N 3.46Å
25	R	52.9	Low	50.6	Low	173 Å²	173	116.7 Å²	116.7	65%	0.653	65%	0.648	S	S	*	*	H	α-helix	trans	-67.1	-33.9	173.5	-70.1	-159.1	-76.8	-176	-2.6	113	A21 E22	A21-R25 PolarHBondContact O-N 3.23Å; E22-R25 PolarHBondContact OE2-NH2 3.02Å; E22-R25 PolarHBondContact O-N 3.4Å; E22-R25 IonicContact OE2-NH2 3.44Å; E22-R25 PolarHBondContact OE1-NH2 2.96Å; E22-R25 IonicContact OE1-NH2 2.58Å; E22-R25 IonicContact OE1-NE 2.77Å; E22-R25 IonicContact OE1-CZ 3.04Å; E22-R25 VanDerWaalsContact CD-NH2 3.33Å; E22-R25 PolarHBondContact OE1-NE 3.46Å
26	M	49.2	Very low	50.6	Low	152 Å²	152	117.6 Å²	117.6	75%	0.749	65%	0.652	S	S	*	*	H	α-helix	trans	-76.1	-27.1	175.2	-73.6	-176.4	88.2	0	0	113.5	E22 C23	E22-M26 PolarHBondContact O-N 2.93Å; E22-M26 VanDerWaalsContact O-N 3.1Å; C23-M26 PolarHBondContact O-N 3.18Å
27	L	50.8	Low	50.6	Low	127 Å²	127	119.1 Å²	119.1	67%	0.665	66%	0.661	S	S	*	*	H	α-helix	trans	-77.7	-30.3	178.2	-76.7	161.9	0	0	0	113.4	C23 L24 S29	C23-L27 WeakPolarHBondContact O-CB 3.45Å; C23-L27 WeakPolarHBondContact O-CD1 3.08Å; C23-L27 VanDerWaalsContact O-CG 3.32Å; C23-L27 WeakPolarHBondContact O-CG 3.46Å; C23-L27 PolarHBondContact O-N 2.84Å; L24-L27 PolarHBondContact O-N 3.11Å; L27-S29 VanDerWaalsContact C-N 3.28Å; L27-S29 PolarHBondContact O-N 3.05Å
28	D	47.5	Very low	50.2	Low	145 Å²	145	118.8 Å²	118.8	78%	0.775	66%	0.658	S	S	*	*	T	Hydrogen-bonded Turn	trans	-71.6	-19.6	-179.7	-167.2	-112.7	0	0	0	113.4	L24 G30	L24-D28 PolarHBondContact O-N 3.46Å; D28-G30 PolarHBondContact O-N 3.2Å; D28-G30 VanDerWaalsContact O-N 3.14Å
29	S	45.2	Very low	49.9	Very low	105 Å²	105	119.3 Å²	119.3	73%	0.734	67%	0.668	S	S	*	*	T	Hydrogen-bonded Turn	trans	-80.8	18.1	-179.8	-69.2	0	0	0	0	115	L27	L27-S29 VanDerWaalsContact C-N 3.28Å; L27-S29 PolarHBondContact O-N 3.05Å
30	G	47.8	Very low	49.3	Very low	63 Å²	63	119.8 Å²	119.8	65%	0.649	68%	0.678	S	S	*	*			trans	65.4	46	170	0	0	0	0	0	113.8	D28 D32	D28-G30 PolarHBondContact O-N 3.2Å; D28-G30 VanDerWaalsContact O-N 3.14Å; G30-D32 VanDerWaalsContact C-N 3.26Å; G30-D32 PolarHBondContact O-N 3.04Å
31	A	41	Very low	48.8	Very low	77 Å²	77	123.1 Å²	123.1	64%	0.636	69%	0.694	S	S	*	*			trans	-70.9	82.7	174.3	0	0	0	0	0	110.9	Y33	A31-Y33 PolarHBondContact O-N 3.31Å
32	D	52.4	Low	48.3	Very low	133 Å²	133	125.6 Å²	125.6	71%	0.711	71%	0.708	S	S	*	*			trans	-68.2	109.8	161.9	-158	-119.5	0	0	0	106.5	G30	G30-D32 VanDerWaalsContact C-N 3.26Å; G30-D32 PolarHBondContact O-N 3.04Å
33	Y	48.2	Very low	48.1	Very low	214 Å²	214	124.3 Å²	124.3	84%	0.839	72%	0.717	S	S	*	*			trans	80.1	85.4	-177.4	-52.2	-80.4	0	0	0	117.6	A31	A31-Y33 PolarHBondContact O-N 3.31Å
34	L	42.4	Very low	47.7	Very low	161 Å²	161	132.4 Å²	132.4	84%	0.843	74%	0.739	S	S	*	*			trans	-123.3	126.5	144.3	-168.3	62.4	0	0	0	109.7	L36	L34-L36 PolarHBondContact O-N 2.9Å
35	H	55.3	Low	47.4	Very low	185 Å²	185	137.1 Å²	137.1	86%	0.856	75%	0.749	S	S	*	*			trans	-41.5	128.6	175.3	-159.9	85.9	0	0	0	112
36	L	52.3	Low	47.3	Very low	149 Å²	149	133.8 Å²	133.8	78%	0.78	76%	0.759	S	S	*	*			trans	-41.7	128	-174.4	-79.1	116.8	0	0	0	115	L34	L34-L36 PolarHBondContact O-N 2.9Å
37	D	50.6	Low	47.3	Very low	165 Å²	165	134.9 Å²	134.9	88%	0.882	76%	0.762	S	S	*	*				-148.2	105.6	124.8	-106.8	-42.2	0	0	0	109
38	A	44.7	Very low	47.1	Very low	74 Å²	74	135.6 Å²	135.6	61%	0.612	77%	0.766	S	S	*	*			trans	-77.5	146.4	177	0	0	0	0	0	110
39	P	44	Very low	47.3	Very low	124 Å²	124	131.7 Å²	131.7	81%	0.805	76%	0.76	S	S	*	*				-123.8	107.6	105.9	31.8	-27.3	0	0	0	111	S41	P39-S41 PolarHBondContact O-N 3.41Å
40	C	41.9	Very low	47.3	Very low	105 Å²	105	137.5 Å²	137.5	71%	0.709	79%	0.791	S	S	*	*			trans	-66	94.5	169.6	-175.3	0	0	0	0	108.9	S42	C40-S42 PolarHBondContact O-N 2.94Å; C40-S42 VanDerWaalsContact O-N 3.11Å
41	S	43.8	Very low	47.3	Very low	117 Å²	117	141.2 Å²	141.2	82%	0.818	80%	0.798	S	S	*	*			trans	-74.6	85.2	154.7	48	0	0	0	0	107.5	P39 G43	P39-S41 PolarHBondContact O-N 3.41Å; S41-G43 PolarHBondContact O-N 2.81Å
42	S	45.2	Very low	47.6	Very low	98 Å²	98	144.6 Å²	144.6	69%	0.685	81%	0.806	S	S	*	*			trans	-68.2	71.5	175.1	42.9	0	0	0	0	111.5	C40	C40-S42 PolarHBondContact O-N 2.94Å; C40-S42 VanDerWaalsContact O-N 3.11Å
43	G	49.1	Very low	47.4	Very low	56 Å²	56	145.2 Å²	145.2	58%	0.577	81%	0.811	S	S	*	*			trans	-96.6	73.3	161.7	0	0	0	0	0	109.7	S41 Y45	S41-G43 PolarHBondContact O-N 2.81Å; G43-Y45 WeakPolarHBondContact O-CD2 3.14Å; G43-Y45 PolarHBondContact O-N 3.36Å
44	R	43.3	Very low	47.3	Very low	233 Å²	233	141.2 Å²	141.2	88%	0.879	81%	0.81	S	S	*	*			trans	-77.9	102.9	167.1	-78.5	-158.2	-64.3	-94.6	0.7	108.7
45	Y	47.4	Very low	47.6	Very low	224 Å²	224	139.9 Å²	139.9	88%	0.878	81%	0.808	S	S	*	*			trans	-47.5	138.6	160.6	-75.1	-98.3	0	0	0	110.8	G43	G43-Y45 WeakPolarHBondContact O-CD2 3.14Å; G43-Y45 PolarHBondContact O-N 3.36Å
46	A	50.8	Low	47.1	Very low	103 Å²	103	136.9 Å²	136.9	85%	0.851	80%	0.804	S	S	*	*			trans	-62.6	125.8	176.4	0	0	0	0	0	111.9
47	H	49.8	Very low	46.7	Very low	175 Å²	175	136.1 Å²	136.1	81%	0.81	81%	0.806	S	S	*	*			trans	-168.2	128.2	158.4	-143.9	-97.9	0	0	0	103.4
48	D	45.8	Very low	46.4	Very low	142 Å²	142	133.8 Å²	133.8	76%	0.759	80%	0.8	S	S	*	*			cis	-174.6	159.1	49.7	-175.3	-136.2	0	0	0	107.3
49	G	51.8	Low	46.6	Very low	63 Å²	63	138.8 Å²	138.8	65%	0.649	82%	0.816	S	S	*	*			trans	-65.4	153.7	-161	0	0	0	0	0	119.2
50	V	46.3	Very low	46.8	Very low	226 Å²	226	140.2 Å²	140.2	100%	1.37	82%	0.817	S	S	*	*			trans	-146	0	138	-75.2	0	0	0	0	108.7

Retrieved 50 of 50 residues in 165.2 ms (Link to these results)

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