A0A087WQN9_MOUSE Loading...

Collagen, type VI, alpha 3

AlphaFold DB , UniProt , Accession A0A087WQN9, Species MOUSE (Mus musculus, Mouse), Gene Col6a3, Length 74 aa.

						>A0A087WQN9_MOUSE|A0A087WQN9|Col6a3
MRKHRHLPLVAVFSLLLSGIATTHAQQHGAQDSADIIFLIDGSQNTGNANFDVIRDFLVNVLERLSVGNQQVQV
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	47.9	Very low	70.9	Confident	245 Å²	245	149 Å²	149	100%	1.207	71%	0.71	S	S	*	*				0	89.1	0	-63.6	159.8	72.5	0	0	108.5
2	R	62.3	Low	71.9	Confident	248 Å²	248	143.9 Å²	143.9	94%	0.936	70%	0.696	S	S	*	*			trans	-142.7	64.3	-165.9	-127.5	-173.2	-164.5	158.6	2.3	111.5
3	K	63.2	Low	72.6	Confident	184 Å²	184	143.5 Å²	143.5	80%	0.8	69%	0.689	S	S	*	*			trans	-148.1	106	167.7	-59	-174.7	-178	-177.4	0	101.8
4	H	61.3	Low	73.1	Confident	137 Å²	137	138.1 Å²	138.1	63%	0.634	67%	0.673	S	S	*	*				-178.4	20	114.3	-75.7	-62.8	0	0	0	111.1	H6 L7	H4-H6 PolarHBondContact O-N 3.13Å; H4-L7 HydrophobicContact CB-CB 4.38Å; H4-L7 PolarHBondContact O-N 3.36Å
5	R	72.1	Confident	73.4	Confident	234 Å²	234	137.8 Å²	137.8	88%	0.883	68%	0.675	S	S	*	*	T	Hydrogen-bonded Turn	trans	-66.4	-18.4	-177.1	-64.6	-177	71.6	-163.7	2.9	113.9
6	H	72.4	Confident	73.6	Confident	138 Å²	138	136.7 Å²	136.7	64%	0.639	67%	0.672	S	S	*	*	T	Hydrogen-bonded Turn	trans	-105.7	-7.3	-179.2	-55.6	-69.1	0	0	0	113.8	H4 P8 L9 V10	H4-H6 PolarHBondContact O-N 3.13Å; H6-P8 VanDerWaalsContact C-CD 3.48Å; H6-L9 PolarHBondContact O-N 3.29Å; H6-V10 WeakPolarHBondContact O-CG2 3.4Å; H6-V10 PolarHBondContact O-N 3.31Å; H6-V10 VanDerWaalsContact O-N 3.13Å
7	L	75.8	Confident	73.3	Confident	109 Å²	109	135.4 Å²	135.4	57%	0.571	67%	0.668	S	S	*	*	H	α-helix	trans	-58.4	-42.2	179.9	-167.2	67.8	0	0	0	113.7	H4 A11	H4-L7 HydrophobicContact CB-CB 4.38Å; H4-L7 PolarHBondContact O-N 3.36Å; L7-A11 PolarHBondContact O-N 3.49Å; L7-A11 VanDerWaalsContact O-N 3.16Å
8	P	79.9	Confident	73	Confident	82 Å²	82	132.3 Å²	132.3	53%	0.532	66%	0.662	S	S	.	*	H	α-helix	trans	-70.7	-34	179.7	27.3	-33.8	0	0	0	112.2	H6 A11 V12	H6-P8 VanDerWaalsContact C-CD 3.48Å; P8-A11 PolarHBondContact O-N 2.9Å; P8-V12 VanDerWaalsContact O-CG2 3.31Å; P8-V12 WeakPolarHBondContact O-CG2 3.42Å; P8-V12 PolarHBondContact O-N 3.4Å
9	L	81.3	Confident	72.3	Confident	121 Å²	121	128.7 Å²	128.7	63%	0.634	66%	0.662	S	S	*	*	H	α-helix	trans	-66	-44.3	179.3	-170.4	87.3	0	0	0	111.3	H6 A11 V12 F13	H6-L9 PolarHBondContact O-N 3.29Å; L9-A11 VanDerWaalsContact C-N 3.32Å; L9-A11 PolarHBondContact O-N 3.17Å; L9-V12 PolarHBondContact O-N 2.97Å; L9-F13 WeakPolarHBondContact O-CB 3.45Å; L9-F13 PolarHBondContact O-N 3.16Å
10	V	81.9	Confident	71.9	Confident	85 Å²	85	128.5 Å²	128.5	52%	0.515	66%	0.661	S	S	.	*	H	α-helix	trans	-63.9	-40.7	177.2	174.9	0	0	0	0	110.5	H6 F13 S14	H6-V10 WeakPolarHBondContact O-CG2 3.4Å; H6-V10 PolarHBondContact O-N 3.31Å; H6-V10 VanDerWaalsContact O-N 3.13Å; V10-F13 PolarHBondContact O-N 2.99Å; V10-S14 WeakPolarHBondContact O-CB 3.33Å; V10-S14 PolarHBondContact O-N 3.4Å; V10-S14 PolarHBondContact O-OG 3.46Å
11	A	81.6	Confident	71.3	Confident	56 Å²	56	125.9 Å²	125.9	46%	0.463	66%	0.659	S	S	.	*	H	α-helix	trans	-62	-45.3	176.6	0	0	0	0	0	112.2	L7 P8 L9 S14 L15	L7-A11 PolarHBondContact O-N 3.49Å; L7-A11 VanDerWaalsContact O-N 3.16Å; P8-A11 PolarHBondContact O-N 2.9Å; L9-A11 VanDerWaalsContact C-N 3.32Å; L9-A11 PolarHBondContact O-N 3.17Å; A11-S14 PolarHBondContact O-N 3Å; A11-L15 WeakPolarHBondContact O-CB 3.31Å; A11-L15 PolarHBondContact O-N 2.95Å
12	V	82.9	Confident	72	Confident	88 Å²	88	119.3 Å²	119.3	53%	0.533	63%	0.632	S	S	.	*	H	α-helix	trans	-65.7	-41.4	178	171.2	0	0	0	0	111.4	P8 L9 L15 L16	P8-V12 VanDerWaalsContact O-CG2 3.31Å; P8-V12 WeakPolarHBondContact O-CG2 3.42Å; P8-V12 PolarHBondContact O-N 3.4Å; L9-V12 PolarHBondContact O-N 2.97Å; V12-L15 PolarHBondContact O-N 3.49Å; V12-L16 HydrophobicContact CG1-CD1 3.94Å; V12-L16 WeakPolarHBondContact O-CB 3.44Å; V12-L16 PolarHBondContact O-N 3.44Å
13	F	81.6	Confident	72	Confident	138 Å²	138	113.5 Å²	113.5	61%	0.605	63%	0.625	S	S	*	*	H	α-helix	trans	-63.9	-43.4	177	-174.9	-101.5	0	0	0	112	L9 V10 L15 L16 L17	L9-F13 WeakPolarHBondContact O-CB 3.45Å; L9-F13 PolarHBondContact O-N 3.16Å; V10-F13 PolarHBondContact O-N 2.99Å; F13-L15 VanDerWaalsContact C-N 3.34Å; F13-L15 PolarHBondContact O-N 3.31Å; F13-L16 PolarHBondContact O-N 2.91Å; F13-L17 PolarHBondContact O-N 3.41Å
14	S	78.9	Confident	71.8	Confident	68 Å²	68	112.5 Å²	112.5	48%	0.476	62%	0.622	S	S	.	*	H	α-helix	trans	-63.4	-38.5	174.8	-62.3	0	0	0	0	112.5	V10 A11 L17 S18	V10-S14 WeakPolarHBondContact O-CB 3.33Å; V10-S14 PolarHBondContact O-N 3.4Å; V10-S14 PolarHBondContact O-OG 3.46Å; A11-S14 PolarHBondContact O-N 3Å; S14-L17 PolarHBondContact O-N 2.99Å; S14-S18 PolarHBondContact O-N 2.88Å; S14-S18 PolarHBondContact O-OG 3.36Å
15	L	78.3	Confident	71.8	Confident	134 Å²	134	110.1 Å²	110.1	70%	0.702	63%	0.626	S	S	*	*	H	α-helix	trans	-67.8	-38.3	177.3	-144	84.1	0	0	0	112.1	A11 V12 F13 S18 G19	A11-L15 WeakPolarHBondContact O-CB 3.31Å; A11-L15 PolarHBondContact O-N 2.95Å; V12-L15 PolarHBondContact O-N 3.49Å; F13-L15 VanDerWaalsContact C-N 3.34Å; F13-L15 PolarHBondContact O-N 3.31Å; L15-S18 PolarHBondContact O-OG 2.99Å; L15-G19 PolarHBondContact O-N 2.79Å
16	L	75.8	Confident	71.2	Confident	120 Å²	120	106.2 Å²	106.2	63%	0.628	62%	0.618	S	S	*	*	H	α-helix	trans	-65.4	-40	174.5	-100.4	146.4	0	0	0	111.7	V12 F13	V12-L16 HydrophobicContact CG1-CD1 3.94Å; V12-L16 WeakPolarHBondContact O-CB 3.44Å; V12-L16 PolarHBondContact O-N 3.44Å; F13-L16 PolarHBondContact O-N 2.91Å
17	L	69.1	Low	70.4	Confident	114 Å²	114	108.6 Å²	108.6	60%	0.597	63%	0.63	S	S	*	*	H	α-helix	trans	-75.2	-32.4	-179.8	-146.6	74.7	0	0	0	112.6	F13 S14 G19 I20	F13-L17 PolarHBondContact O-N 3.41Å; S14-L17 PolarHBondContact O-N 2.99Å; L17-G19 VanDerWaalsContact C-N 3.27Å; L17-G19 PolarHBondContact O-N 3.37Å; L17-I20 PolarHBondContact O-N 3.38Å
18	S	67.3	Low	69.4	Low	80 Å²	80	110.4 Å²	110.4	56%	0.559	64%	0.635	S	S	*	*	H	α-helix	trans	-69.6	-22.9	177.1	63.7	0	0	0	0	113.6	S14 L15 I20	S14-S18 PolarHBondContact O-N 2.88Å; S14-S18 PolarHBondContact O-OG 3.36Å; L15-S18 PolarHBondContact O-OG 2.99Å; S18-I20 VanDerWaalsContact C-N 3.3Å; S18-I20 PolarHBondContact O-N 2.89Å
19	G	60.3	Low	68.4	Low	65 Å²	65	109.1 Å²	109.1	67%	0.67	64%	0.636	S	S	*	*	T	Hydrogen-bonded Turn	trans	-76.3	-9.5	179.1	0	0	0	0	0	115.1	L15 L17	L15-G19 PolarHBondContact O-N 2.79Å; L17-G19 VanDerWaalsContact C-N 3.27Å; L17-G19 PolarHBondContact O-N 3.37Å
20	I	63.6	Low	67.6	Low	123 Å²	123	107.5 Å²	107.5	63%	0.631	64%	0.641	S	S	*	*	T	Hydrogen-bonded Turn	trans	-100.3	16.8	-179.5	-46.4	167.1	0	0	0	111	L17 S18 T22	L17-I20 PolarHBondContact O-N 3.38Å; S18-I20 VanDerWaalsContact C-N 3.3Å; S18-I20 PolarHBondContact O-N 2.89Å; I20-T22 PolarHBondContact O-N 3.45Å
21	A	60.9	Low	66.9	Low	75 Å²	75	108.6 Å²	108.6	62%	0.62	64%	0.64	S	S	*	*			trans	-75.3	75.5	163.1	0	0	0	0	0	108.2	T23	A21-T23 PolarHBondContact O-N 3.47Å
22	T	61.8	Low	66.8	Low	106 Å²	106	113 Å²	113	65%	0.65	66%	0.656	S	S	*	*			trans	-60.9	88.7	160.6	-4.4	0	0	0	0	106	I20 H24	I20-T22 PolarHBondContact O-N 3.45Å; T22-H24 PolarHBondContact O-N 3.14Å
23	T	61.4	Low	67.3	Low	126 Å²	126	112.7 Å²	112.7	77%	0.773	66%	0.658	S	S	*	*			trans	-62.2	99.5	160.4	36.4	0	0	0	0	104.7	A21 A25	A21-T23 PolarHBondContact O-N 3.47Å; T23-A25 PolarHBondContact O-N 3.01Å
24	H	60.2	Low	67.8	Low	163 Å²	163	108.3 Å²	108.3	76%	0.755	65%	0.647	S	S	*	*			trans	-60.2	85.3	156.4	-73.1	-85.5	0	0	0	104.9	T22 Q26	T22-H24 PolarHBondContact O-N 3.14Å; H24-Q26 PolarHBondContact O-N 2.71Å
25	A	60.3	Low	68.6	Low	87 Å²	87	111.2 Å²	111.2	72%	0.719	66%	0.657	S	S	*	*			trans	-55.5	99.7	156.2	0	0	0	0	0	102.9	T23 Q27	T23-A25 PolarHBondContact O-N 3.01Å; A25-Q27 PolarHBondContact O-N 2.72Å
26	Q	60	Low	69.4	Low	153 Å²	153	107.4 Å²	107.4	72%	0.715	64%	0.637	S	S	*	*			trans	-64.9	91.2	175.5	-136.5	161	-102	0	0	103.1	H24 H28	H24-Q26 PolarHBondContact O-N 2.71Å; Q26-H28 PolarHBondContact NE2-CE1 3.25Å; Q26-H28 PolarHBondContact O-N 2.72Å
27	Q	55.4	Low	70.4	Confident	187 Å²	187	109.3 Å²	109.3	87%	0.874	65%	0.646	S	S	*	*			trans	-69.7	71.8	168.9	-161.5	174.6	-50.4	0	0	104.3	A25 G29	A25-Q27 PolarHBondContact O-N 2.72Å; Q27-G29 PolarHBondContact O-N 2.79Å
28	H	54.2	Low	71.7	Confident	147 Å²	147	107.4 Å²	107.4	68%	0.681	63%	0.633	S	S	*	*			trans	-61.5	85.8	151.5	-82.6	69.5	0	0	0	102.8	Q26 A30	Q26-H28 PolarHBondContact NE2-CE1 3.25Å; Q26-H28 PolarHBondContact O-N 2.72Å; H28-A30 PolarHBondContact O-N 2.99Å
29	G	60.6	Low	73	Confident	55 Å²	55	111.8 Å²	111.8	57%	0.567	65%	0.65	S	S	*	*			trans	-50	117	157.6	0	0	0	0	0	103.8	Q27 Q31	Q27-G29 PolarHBondContact O-N 2.79Å; G29-Q31 VanDerWaalsContact C-N 3.31Å; G29-Q31 PolarHBondContact O-N 3.3Å
30	A	64.1	Low	74.5	Confident	88 Å²	88	111.9 Å²	111.9	73%	0.727	63%	0.634	S	S	*	*			trans	-51.1	107.9	175.1	0	0	0	0	0	105.3	H28 D32	H28-A30 PolarHBondContact O-N 2.99Å; A30-D32 PolarHBondContact O-N 2.81Å; A30-D32 VanDerWaalsContact O-N 3.11Å
31	Q	67.1	Low	75.8	Confident	108 Å²	108	110.4 Å²	110.4	51%	0.505	63%	0.627	S	S	.	*			trans	-68.9	112.8	175.3	-164.5	171.1	-57.9	0	0	103.2	G29 S33 Q70	G29-Q31 VanDerWaalsContact C-N 3.31Å; G29-Q31 PolarHBondContact O-N 3.3Å; Q31-S33 VanDerWaalsContact C-N 3.32Å; Q31-S33 PolarHBondContact O-N 2.97Å; Q31-Q70 PolarHBondContact NE2-O 2.74Å
32	D	79.8	Confident	77.1	Confident	148 Å²	148	110.2 Å²	110.2	79%	0.791	63%	0.633	S	S	*	*			trans	-62	96.7	-176.6	-73.2	-30.2	0	0	0	108.6	A30	A30-D32 PolarHBondContact O-N 2.81Å; A30-D32 VanDerWaalsContact O-N 3.11Å
33	S	91.8	Very high	78.6	Confident	81 Å²	81	107.3 Å²	107.3	57%	0.566	62%	0.617	S	S	*	*			trans	-111.1	138.6	179.5	63.1	0	0	0	0	109.4	Q31 Q71	Q31-S33 VanDerWaalsContact C-N 3.32Å; Q31-S33 PolarHBondContact O-N 2.97Å; S33-Q71 WeakPolarHBondContact CB-O 3.29Å
34	A	93.6	Very high	79.8	Confident	47 Å²	47	109.9 Å²	109.9	39%	0.388	62%	0.62	S	S	.	*	E	Extended strand (participates in β ladder)	trans	-153	148.5	178.1	0	0	0	0	0	110.5	V72 Q73	A34-V72 CarbonylContact O-C 3.53Å; A34-V72 VanDerWaalsContact O-CA 3.27Å; A34-V72 WeakPolarHBondContact O-CA 3.38Å; A34-Q73 PolarHBondContact O-N 2.83Å
35	D	95.6	Very high	81	Confident	128 Å²	128	109 Å²	109	68%	0.684	62%	0.621	S	S	*	*	E	Extended strand (participates in β ladder)	trans	-100.7	123.5	170	-56.9	-34.1	0	0	0	108.5	Q73	D35-Q73 WeakPolarHBondContact CA-O 3.15Å; D35-Q73 WeakPolarHBondContact OD1-CB 3.5Å
36	I	94.9	Very high	82.3	Confident	55 Å²	55	105.8 Å²	105.8	28%	0.282	59%	0.593	S	S	.	*			trans	-120.1	127.7	-175.5	-57.6	176.3	0	0	0	108.9	F38 L65 V72 Q73 V74	I36-F38 HydrophobicContact CG2-CD2 4.35Å; I36-F38 HydrophobicContact CG2-CE1 4.18Å; I36-F38 HydrophobicContact CG2-CE2 3.87Å; I36-F38 HydrophobicContact CG2-CZ 3.78Å; I36-L65 HydrophobicContact CD1-CD1 4.08Å; I36-L65 HydrophobicContact CD1-CD2 4.46Å; I36-V72 HydrophobicContact CD1-CG1 3.67Å; I36-V72 HydrophobicContact CG1-CG1 4.15Å; I36-Q73 PolarHBondContact N-O 3.46Å; I36-V74 HydrophobicContact CB-CG1 4.36Å; I36-V74 WeakPolarHBondContact O-CA 3.26Å
37	I	96.3	Very high	83.5	Confident	160 Å²	160	99.7 Å²	99.7	82%	0.821	57%	0.571	S	S	*	*			trans	-110.2	121.5	175.2	-61	169.3	0	0	0	108.8
38	F	95.6	Very high	84.6	Confident	74 Å²	74	97.6 Å²	97.6	33%	0.325	57%	0.565	S	S	.	*			trans	-91.3	112.5	173.8	-63	-80.9	0	0	0	110.7	I36 L58 V61 L62 V74	I36-F38 HydrophobicContact CG2-CD2 4.35Å; I36-F38 HydrophobicContact CG2-CE1 4.18Å; I36-F38 HydrophobicContact CG2-CE2 3.87Å; I36-F38 HydrophobicContact CG2-CZ 3.78Å; F38-L58 HydrophobicContact CB-CD2 4.24Å; F38-L58 HydrophobicContact CD1-CD2 3.34Å; F38-L58 HydrophobicContact CD2-CD2 4.49Å; F38-L58 HydrophobicContact CE1-CD2 3.7Å; F38-L58 HydrophobicContact CG-CD2 3.78Å; F38-L58 HydrophobicContact CZ-CD2 4.41Å; F38-V61 HydrophobicContact CE1-CG1 4.42Å; F38-V61 HydrophobicContact CZ-CG1 4.2Å; F38-L62 HydrophobicContact CE2-CD2 4.13Å; F38-V74 HydrophobicContact CE2-CB 4.11Å; F38-V74 HydrophobicContact CE2-CG1 3.93Å
39	L	94.9	Very high	85.8	Confident	172 Å²	172	94.2 Å²	94.2	90%	0.901	56%	0.563	S	S	*	*			trans	-95.3	117.6	171	-177.7	62.7	0	0	0	109.7
40	I	92.1	Very high	87	Confident	66 Å²	66	96 Å²	96	34%	0.338	56%	0.559	S	S	.	*			trans	-110.4	131.8	-178	-54.9	168.5	0	0	0	109.4	G42 F51 I54 L58	I40-G42 PolarHBondContact O-N 2.94Å; I40-F51 HydrophobicContact CG2-CD2 4.25Å; I40-F51 HydrophobicContact CG2-CE2 3.85Å; I40-I54 HydrophobicContact CG1-CG2 4.39Å; I40-I54 HydrophobicContact CG2-CD1 4.46Å; I40-I54 HydrophobicContact CG2-CG2 3.91Å; I40-L58 HydrophobicContact CD1-CD1 3.35Å; I40-L58 HydrophobicContact CG1-CD1 4.01Å
41	D	90.3	Very high	88.3	Confident	92 Å²	92	96 Å²	96	49%	0.492	54%	0.543	S	S	.	.			trans	-77.7	110.8	173.6	-177.7	19.2	0	0	0	111.4	S43 T46	D41-S43 WeakPolarHBondContact OD1-CB 3.02Å; D41-S43 PolarHBondContact OD1-N 2.78Å; D41-S43 PolarHBondContact OD1-OG 2.95Å; D41-S43 PolarHBondContact OD2-OG 2.86Å; D41-T46 WeakPolarHBondContact O-CB 3.45Å; D41-T46 PolarHBondContact O-OG1 2.79Å; D41-T46 PolarHBondContact OD2-OG1 3.11Å
42	G	89.1	Confident	89.5	Confident	71 Å²	71	95 Å²	95	73%	0.732	54%	0.541	S	S	*	.			trans	-91.2	15.9	174.1	0	0	0	0	0	114.6	I40	I40-G42 PolarHBondContact O-N 2.94Å
43	S	92.1	Very high	90.2	Very high	46 Å²	46	92.4 Å²	92.4	32%	0.322	53%	0.53	S	S	.	.	S	Bend	trans	-64.2	159.7	179.1	76	0	0	0	0	112.9	D41 N45 T46 G47	D41-S43 WeakPolarHBondContact OD1-CB 3.02Å; D41-S43 PolarHBondContact OD1-N 2.78Å; D41-S43 PolarHBondContact OD1-OG 2.95Å; D41-S43 PolarHBondContact OD2-OG 2.86Å; S43-N45 PolarHBondContact O-N 3Å; S43-N45 PolarHBondContact OG-N 2.86Å; S43-T46 WeakPolarHBondContact O-CB 3.44Å; S43-T46 PolarHBondContact O-N 2.92Å; S43-T46 VanDerWaalsContact O-N 3.09Å; S43-G47 PolarHBondContact O-N 2.96Å
44	Q	86.8	Confident	90.4	Very high	179 Å²	179	91 Å²	91	84%	0.836	52%	0.516	S	S	*	.	T	Hydrogen-bonded Turn	trans	-62.2	-24	174.2	-66.2	-66.4	4.3	0	0	113.1	T46 G47	Q44-T46 VanDerWaalsContact C-N 3.3Å; Q44-G47 PolarHBondContact O-N 3.36Å
45	N	86.9	Confident	90.4	Very high	146 Å²	146	95.9 Å²	95.9	78%	0.781	53%	0.525	S	S	*	.	T	Hydrogen-bonded Turn	trans	-69	-31.2	176.3	-176.8	74.7	0	0	0	111.8	S43	S43-N45 PolarHBondContact O-N 3Å; S43-N45 PolarHBondContact OG-N 2.86Å
46	T	86.6	Confident	90.5	Very high	19 Å²	19	94.1 Å²	94.1	12%	0.117	52%	0.515	C	S	.	.	T	Hydrogen-bonded Turn	trans	-67.1	-51.2	169.6	-54.8	0	0	0	0	109.8	D41 S43 Q44 N50 I54	D41-T46 WeakPolarHBondContact O-CB 3.45Å; D41-T46 PolarHBondContact O-OG1 2.79Å; D41-T46 PolarHBondContact OD2-OG1 3.11Å; S43-T46 WeakPolarHBondContact O-CB 3.44Å; S43-T46 PolarHBondContact O-N 2.92Å; S43-T46 VanDerWaalsContact O-N 3.09Å; Q44-T46 VanDerWaalsContact C-N 3.3Å; T46-N50 HydrophobicContact CG2-CB 3.95Å; T46-N50 VanDerWaalsContact O-CB 3.26Å; T46-N50 WeakPolarHBondContact O-CB 3.43Å; T46-N50 PolarHBondContact O-ND2 3.23Å; T46-I54 HydrophobicContact CG2-CD1 3.81Å
47	G	85.4	Confident	90.5	Very high	25 Å²	25	97.6 Å²	97.6	26%	0.258	53%	0.528	S	S	.	.	H	α-helix	trans	63.9	169.1	-178.1	0	0	0	0	0	113.7	S43 Q44 A49 N50 F51	S43-G47 PolarHBondContact O-N 2.96Å; Q44-G47 PolarHBondContact O-N 3.36Å; G47-A49 PolarHBondContact O-N 3.2Å; G47-N50 PolarHBondContact O-N 3.21Å; G47-F51 PolarHBondContact O-N 2.89Å
48	N	78.6	Confident	90.5	Very high	142 Å²	142	91.1 Å²	91.1	76%	0.759	50%	0.496	S	S	*	.	H	α-helix	trans	-66.2	-40.1	-170.2	-65.6	-15.6	0	0	0	113.7	N50 F51 D52	N48-N50 VanDerWaalsContact C-N 3.33Å; N48-N50 PolarHBondContact O-N 3.02Å; N48-F51 WeakPolarHBondContact O-CB 3.28Å; N48-F51 PolarHBondContact O-N 3.27Å; N48-F51 VanDerWaalsContact O-N 3.17Å; N48-D52 PolarHBondContact O-N 2.78Å
49	A	78.9	Confident	90.6	Very high	76 Å²	76	90.6 Å²	90.6	63%	0.628	50%	0.498	S	S	*	.	H	α-helix	trans	-64	-36.4	-177.2	0	0	0	0	0	112.8	G47	G47-A49 PolarHBondContact O-N 3.2Å
50	N	86.8	Confident	90.7	Very high	92 Å²	92	86.3 Å²	86.3	49%	0.492	48%	0.476	S	S	.	.	H	α-helix	trans	-79.5	-26.7	176.5	-62.2	-38.8	0	0	0	111.9	T46 G47 N48 D52 V53 I54	T46-N50 HydrophobicContact CG2-CB 3.95Å; T46-N50 VanDerWaalsContact O-CB 3.26Å; T46-N50 WeakPolarHBondContact O-CB 3.43Å; T46-N50 PolarHBondContact O-ND2 3.23Å; G47-N50 PolarHBondContact O-N 3.21Å; N48-N50 VanDerWaalsContact C-N 3.33Å; N48-N50 PolarHBondContact O-N 3.02Å; N50-D52 VanDerWaalsContact C-N 3.34Å; N50-V53 PolarHBondContact O-N 3.23Å; N50-I54 VanDerWaalsContact O-CG1 3.29Å; N50-I54 WeakPolarHBondContact O-CG1 3.43Å; N50-I54 PolarHBondContact O-N 3.49Å
51	F	91.5	Very high	91	Very high	90 Å²	90	85 Å²	85	40%	0.395	47%	0.471	S	S	.	.	H	α-helix	trans	-63.2	-41.3	175.5	-169.7	-95.8	0	0	0	111.9	I40 G47 N48 V53 I54 R55	I40-F51 HydrophobicContact CG2-CD2 4.25Å; I40-F51 HydrophobicContact CG2-CE2 3.85Å; G47-F51 PolarHBondContact O-N 2.89Å; N48-F51 WeakPolarHBondContact O-CB 3.28Å; N48-F51 PolarHBondContact O-N 3.27Å; N48-F51 VanDerWaalsContact O-N 3.17Å; F51-V53 VanDerWaalsContact C-N 3.32Å; F51-V53 PolarHBondContact O-N 3.17Å; F51-I54 PolarHBondContact O-N 3.22Å; F51-R55 WeakPolarHBondContact O-CB 3.38Å; F51-R55 PolarHBondContact O-N 3.45Å
52	D	92.6	Very high	91.2	Very high	86 Å²	86	83.7 Å²	83.7	46%	0.46	46%	0.464	S	S	.	.	H	α-helix	trans	-61.9	-40.7	175.1	-70	-29.7	0	0	0	111.6	N48 N50 I54 R55 D56	N48-D52 PolarHBondContact O-N 2.78Å; N50-D52 VanDerWaalsContact C-N 3.34Å; D52-I54 PolarHBondContact O-N 3.1Å; D52-R55 WeakPolarHBondContact O-CB 3.25Å; D52-R55 PolarHBondContact O-N 2.93Å; D52-D56 PolarHBondContact O-N 3.4Å
53	V	94.8	Very high	91.6	Very high	93 Å²	93	87.3 Å²	87.3	56%	0.564	46%	0.462	S	S	*	.	H	α-helix	trans	-63.7	-42	174.9	176.9	0	0	0	0	111.8	N50 F51 R55 D56 F57	N50-V53 PolarHBondContact O-N 3.23Å; F51-V53 VanDerWaalsContact C-N 3.32Å; F51-V53 PolarHBondContact O-N 3.17Å; V53-R55 VanDerWaalsContact C-N 3.34Å; V53-D56 PolarHBondContact O-N 3.28Å; V53-F57 WeakPolarHBondContact O-CB 3.37Å; V53-F57 PolarHBondContact O-N 3.5Å
54	I	94.9	Very high	91.7	Very high	52 Å²	52	95.3 Å²	95.3	27%	0.267	49%	0.485	S	S	.	.	H	α-helix	trans	-63.1	-42.8	176.2	-68.4	162.9	0	0	0	110.3	I40 T46 N50 F51 D52 F57 L58	I40-I54 HydrophobicContact CG1-CG2 4.39Å; I40-I54 HydrophobicContact CG2-CD1 4.46Å; I40-I54 HydrophobicContact CG2-CG2 3.91Å; T46-I54 HydrophobicContact CG2-CD1 3.81Å; N50-I54 VanDerWaalsContact O-CG1 3.29Å; N50-I54 WeakPolarHBondContact O-CG1 3.43Å; N50-I54 PolarHBondContact O-N 3.49Å; F51-I54 PolarHBondContact O-N 3.22Å; D52-I54 PolarHBondContact O-N 3.1Å; I54-F57 WeakPolarHBondContact O-CB 3.45Å; I54-F57 PolarHBondContact O-N 3.23Å; I54-L58 HydrophobicContact CG2-CD1 4.14Å; I54-L58 HydrophobicContact CG2-CG 4.47Å; I54-L58 WeakPolarHBondContact O-CG 3.27Å; I54-L58 PolarHBondContact O-N 2.97Å
55	R	94.2	Very high	92	Very high	150 Å²	150	89.2 Å²	89.2	57%	0.566	46%	0.458	S	S	*	.	H	α-helix	trans	-60.3	-48.3	176.5	175.7	-174.4	140.2	-176.8	-4.2	111.2	F51 D52 V53 F57 L58 V59	F51-R55 WeakPolarHBondContact O-CB 3.38Å; F51-R55 PolarHBondContact O-N 3.45Å; D52-R55 WeakPolarHBondContact O-CB 3.25Å; D52-R55 PolarHBondContact O-N 2.93Å; V53-R55 VanDerWaalsContact C-N 3.34Å; R55-F57 VanDerWaalsContact C-N 3.29Å; R55-F57 PolarHBondContact O-N 3.45Å; R55-L58 PolarHBondContact O-N 3.15Å; R55-L58 VanDerWaalsContact O-N 3.15Å; R55-V59 WeakPolarHBondContact O-CG2 3.47Å; R55-V59 PolarHBondContact O-N 3.42Å
56	D	96.4	Very high	92.4	Very high	91 Å²	91	86.1 Å²	86.1	49%	0.487	45%	0.447	S	S	.	.	H	α-helix	trans	-62.9	-38.3	179.1	-72.7	-11.5	0	0	0	111.3	D52 V53 V59 N60	D52-D56 PolarHBondContact O-N 3.4Å; V53-D56 PolarHBondContact O-N 3.28Å; D56-V59 PolarHBondContact O-N 2.89Å; D56-N60 PolarHBondContact O-N 3.21Å; D56-N60 VanDerWaalsContact O-N 3.1Å; D56-N60 PolarHBondContact O-ND2 3.45Å
57	F	96	Very high	92.8	Very high	127 Å²	127	88.6 Å²	88.6	56%	0.557	46%	0.463	S	S	*	.	H	α-helix	trans	-59	-47.8	171.3	166.7	-99.9	0	0	0	112.1	V53 I54 R55 V59 N60 V61	V53-F57 WeakPolarHBondContact O-CB 3.37Å; V53-F57 PolarHBondContact O-N 3.5Å; I54-F57 WeakPolarHBondContact O-CB 3.45Å; I54-F57 PolarHBondContact O-N 3.23Å; R55-F57 VanDerWaalsContact C-N 3.29Å; R55-F57 PolarHBondContact O-N 3.45Å; F57-V59 VanDerWaalsContact C-N 3.34Å; F57-V59 PolarHBondContact O-N 3.33Å; F57-N60 PolarHBondContact O-N 3.38Å; F57-V61 HydrophobicContact CD1-CG2 4.49Å; F57-V61 HydrophobicContact CD2-CG2 4.24Å; F57-V61 HydrophobicContact CE1-CG2 4Å; F57-V61 HydrophobicContact CE2-CG2 3.72Å; F57-V61 HydrophobicContact CZ-CG2 3.59Å; F57-V61 WeakPolarHBondContact O-CG2 3.45Å; F57-V61 PolarHBondContact O-N 3.44Å
58	L	97.1	Very high	93.1	Very high	25 Å²	25	88.5 Å²	88.5	13%	0.131	46%	0.462	C	S	.	.	H	α-helix	trans	-62.4	-40.9	179.6	-70.4	172.1	0	0	0	112.1	F38 I40 I54 R55 N60 V61 L62	F38-L58 HydrophobicContact CB-CD2 4.24Å; F38-L58 HydrophobicContact CD1-CD2 3.34Å; F38-L58 HydrophobicContact CD2-CD2 4.49Å; F38-L58 HydrophobicContact CE1-CD2 3.7Å; F38-L58 HydrophobicContact CG-CD2 3.78Å; F38-L58 HydrophobicContact CZ-CD2 4.41Å; I40-L58 HydrophobicContact CD1-CD1 3.35Å; I40-L58 HydrophobicContact CG1-CD1 4.01Å; I54-L58 HydrophobicContact CG2-CD1 4.14Å; I54-L58 HydrophobicContact CG2-CG 4.47Å; I54-L58 WeakPolarHBondContact O-CG 3.27Å; I54-L58 PolarHBondContact O-N 2.97Å; R55-L58 PolarHBondContact O-N 3.15Å; R55-L58 VanDerWaalsContact O-N 3.15Å; L58-N60 PolarHBondContact O-N 3.49Å; L58-V61 PolarHBondContact O-N 2.94Å; L58-L62 WeakPolarHBondContact O-CB 3.49Å; L58-L62 VanDerWaalsContact O-CG 3.25Å; L58-L62 WeakPolarHBondContact O-CG 3.4Å; L58-L62 PolarHBondContact O-N 3.01Å
59	V	96.9	Very high	93.7	Very high	63 Å²	63	89.1 Å²	89.1	38%	0.382	47%	0.465	S	S	.	.	H	α-helix	trans	-57.9	-49.7	174.2	172.3	0	0	0	0	110.6	R55 D56 F57 V61 L62 E63	R55-V59 WeakPolarHBondContact O-CG2 3.47Å; R55-V59 PolarHBondContact O-N 3.42Å; D56-V59 PolarHBondContact O-N 2.89Å; F57-V59 VanDerWaalsContact C-N 3.34Å; F57-V59 PolarHBondContact O-N 3.33Å; V59-V61 VanDerWaalsContact C-N 3.26Å; V59-V61 PolarHBondContact O-N 2.95Å; V59-L62 PolarHBondContact O-N 3.34Å; V59-E63 HydrophobicContact CG1-CG 4.47Å; V59-E63 WeakPolarHBondContact O-CG 3.44Å; V59-E63 PolarHBondContact O-N 3.29Å
60	N	97.8	Very high	94.3	Very high	82 Å²	82	92.9 Å²	92.9	44%	0.439	47%	0.469	S	S	.	.	H	α-helix	trans	-61.8	-31.5	178.9	-75.1	-62.3	0	0	0	113.5	D56 F57 L58 R64	D56-N60 PolarHBondContact O-N 3.21Å; D56-N60 VanDerWaalsContact O-N 3.1Å; D56-N60 PolarHBondContact O-ND2 3.45Å; F57-N60 PolarHBondContact O-N 3.38Å; L58-N60 PolarHBondContact O-N 3.49Å; N60-R64 WeakPolarHBondContact O-CG 3.48Å
61	V	96.6	Very high	94.6	Very high	39 Å²	39	92 Å²	92	24%	0.236	46%	0.462	C	S	.	.	H	α-helix	trans	-72.3	-48.5	174.6	170.1	0	0	0	0	110.4	F38 F57 L58 V59 E63 R64 L65	F38-V61 HydrophobicContact CE1-CG1 4.42Å; F38-V61 HydrophobicContact CZ-CG1 4.2Å; F57-V61 HydrophobicContact CD1-CG2 4.49Å; F57-V61 HydrophobicContact CD2-CG2 4.24Å; F57-V61 HydrophobicContact CE1-CG2 4Å; F57-V61 HydrophobicContact CE2-CG2 3.72Å; F57-V61 HydrophobicContact CZ-CG2 3.59Å; F57-V61 WeakPolarHBondContact O-CG2 3.45Å; F57-V61 PolarHBondContact O-N 3.44Å; L58-V61 PolarHBondContact O-N 2.94Å; V59-V61 VanDerWaalsContact C-N 3.26Å; V59-V61 PolarHBondContact O-N 2.95Å; V61-E63 VanDerWaalsContact C-N 3.29Å; V61-E63 PolarHBondContact O-N 3.22Å; V61-R64 PolarHBondContact O-N 3.32Å; V61-L65 HydrophobicContact CG1-CD1 3.88Å; V61-L65 HydrophobicContact CG1-CG 4.38Å; V61-L65 WeakPolarHBondContact O-CG 3.43Å; V61-L65 PolarHBondContact O-N 3.17Å
62	L	96.2	Very high	94.8	Very high	64 Å²	64	88.5 Å²	88.5	34%	0.335	45%	0.448	S	S	.	.	H	α-helix	trans	-60.9	-37.4	-179.4	-71	172.6	0	0	0	112.1	F38 L58 V59 R64 L65 V67 V74	F38-L62 HydrophobicContact CE2-CD2 4.13Å; L58-L62 WeakPolarHBondContact O-CB 3.49Å; L58-L62 VanDerWaalsContact O-CG 3.25Å; L58-L62 WeakPolarHBondContact O-CG 3.4Å; L58-L62 PolarHBondContact O-N 3.01Å; V59-L62 PolarHBondContact O-N 3.34Å; L62-R64 PolarHBondContact O-N 3.33Å; L62-L65 HydrophobicContact CD2-CD1 4.46Å; L62-L65 PolarHBondContact O-N 2.93Å; L62-L65 VanDerWaalsContact O-N 3.17Å; L62-V67 HydrophobicContact CD2-CG2 4.4Å; L62-V74 HydrophobicContact CD2-CB 4.14Å; L62-V74 HydrophobicContact CD2-CG1 3.8Å; L62-V74 HydrophobicContact CD2-CG2 3.83Å
63	E	96.3	Very high	94.9	Very high	147 Å²	147	88.9 Å²	88.9	69%	0.687	45%	0.447	S	S	*	.	T	Hydrogen-bonded Turn	trans	-62.2	-22.6	175.1	-75.4	179.2	173.9	0	0	113.8	V59 V61	V59-E63 HydrophobicContact CG1-CG 4.47Å; V59-E63 WeakPolarHBondContact O-CG 3.44Å; V59-E63 PolarHBondContact O-N 3.29Å; V61-E63 VanDerWaalsContact C-N 3.29Å; V61-E63 PolarHBondContact O-N 3.22Å
64	R	94.8	Very high	94.8	Very high	213 Å²	213	89.2 Å²	89.2	80%	0.804	45%	0.449	S	S	*	.	T	Hydrogen-bonded Turn	trans	-95.3	-15.6	178.6	-64	174.7	-175.5	-166.1	1.5	113	N60 V61 L62	N60-R64 WeakPolarHBondContact O-CG 3.48Å; V61-R64 PolarHBondContact O-N 3.32Å; L62-R64 PolarHBondContact O-N 3.33Å
65	L	94.1	Very high	94.8	Very high	52 Å²	52	91.1 Å²	91.1	27%	0.272	46%	0.458	S	S	.	.	S	Bend	trans	-87.2	136.7	178.2	-68.7	172	0	0	0	109.9	I36 V61 L62 V67 V72	I36-L65 HydrophobicContact CD1-CD1 4.08Å; I36-L65 HydrophobicContact CD1-CD2 4.46Å; V61-L65 HydrophobicContact CG1-CD1 3.88Å; V61-L65 HydrophobicContact CG1-CG 4.38Å; V61-L65 WeakPolarHBondContact O-CG 3.43Å; V61-L65 PolarHBondContact O-N 3.17Å; L62-L65 HydrophobicContact CD2-CD1 4.46Å; L62-L65 PolarHBondContact O-N 2.93Å; L62-L65 VanDerWaalsContact O-N 3.17Å; L65-V67 HydrophobicContact CB-CG2 3.84Å; L65-V67 PolarHBondContact O-N 3.03Å; L65-V72 HydrophobicContact CD1-CG1 4.37Å
66	S	94.5	Very high	94.9	Very high	80 Å²	80	88 Å²	88	56%	0.559	45%	0.453	S	S	*	.			trans	-75.4	79.9	169.7	-59.1	0	0	0	0	109	Q71 V72	S66-Q71 VanDerWaalsContact CB-OE1 3.31Å; S66-Q71 WeakPolarHBondContact O-CB 3.46Å; S66-Q71 PolarHBondContact O-OE1 3.27Å; S66-V72 WeakPolarHBondContact O-CB 3.34Å; S66-V72 PolarHBondContact O-N 3.27Å
67	V	94.4	Very high	94.8	Very high	72 Å²	72	87.8 Å²	87.8	44%	0.436	45%	0.451	S	S	.	.	B	Isolated β-bridge	trans	-82.6	127.4	-177.8	-179.2	0	0	0	0	110.4	L62 L65 V72 V74	L62-V67 HydrophobicContact CD2-CG2 4.4Å; L65-V67 HydrophobicContact CB-CG2 3.84Å; L65-V67 PolarHBondContact O-N 3.03Å; V67-V72 VanDerWaalsContact CA-O 3.28Å; V67-V72 WeakPolarHBondContact CA-O 3.46Å; V67-V74 HydrophobicContact CG1-CG2 4.24Å; V67-V74 HydrophobicContact CG2-CG1 4.35Å
68	G	92.5	Very high	94.7	Very high	23 Å²	23	85.5 Å²	85.5	24%	0.237	45%	0.445	C	S	.	.	S	Bend	trans	174.2	168.9	177.7	0	0	0	0	0	113.8	Q70 Q71 V72	G68-Q70 PolarHBondContact O-N 2.77Å; G68-Q71 PolarHBondContact O-N 3.21Å; G68-V72 PolarHBondContact N-O 3.09Å
69	N	90.8	Very high	94.6	Very high	155 Å²	155	89.3 Å²	89.3	83%	0.829	46%	0.464	S	S	*	.	T	Hydrogen-bonded Turn	trans	-56.7	-24.7	-170.8	-65.7	-11.4	0	0	0	115.2	Q73	N69-Q73 PolarHBondContact O-NE2 2.87Å
70	Q	91.5	Very high	94.4	Very high	154 Å²	154	91.1 Å²	91.1	72%	0.72	47%	0.47	S	S	*	.	T	Hydrogen-bonded Turn	trans	-119	14.7	179.2	-58.2	-174.2	-86	0	0	112.3	Q31 G68	Q31-Q70 PolarHBondContact NE2-O 2.74Å; G68-Q70 PolarHBondContact O-N 2.77Å
71	Q	93.3	Very high	94.2	Very high	75 Å²	75	91.7 Å²	91.7	35%	0.35	47%	0.472	S	S	.	.	S	Bend	trans	-129.1	-134.9	-173.9	-60.1	162	28.8	0	0	108.5	S33 S66 G68	S33-Q71 WeakPolarHBondContact CB-O 3.29Å; S66-Q71 VanDerWaalsContact CB-OE1 3.31Å; S66-Q71 WeakPolarHBondContact O-CB 3.46Å; S66-Q71 PolarHBondContact O-OE1 3.27Å; G68-Q71 PolarHBondContact O-N 3.21Å
72	V	94.8	Very high	94	Very high	15 Å²	15	95.8 Å²	95.8	9%	0.091	49%	0.49	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-74.2	132.8	174.7	-180	0	0	0	0	109.5	A34 I36 L65 S66 V67 G68 V74	A34-V72 CarbonylContact O-C 3.53Å; A34-V72 VanDerWaalsContact O-CA 3.27Å; A34-V72 WeakPolarHBondContact O-CA 3.38Å; I36-V72 HydrophobicContact CD1-CG1 3.67Å; I36-V72 HydrophobicContact CG1-CG1 4.15Å; L65-V72 HydrophobicContact CD1-CG1 4.37Å; S66-V72 WeakPolarHBondContact O-CB 3.34Å; S66-V72 PolarHBondContact O-N 3.27Å; V67-V72 VanDerWaalsContact CA-O 3.28Å; V67-V72 WeakPolarHBondContact CA-O 3.46Å; G68-V72 PolarHBondContact N-O 3.09Å; V72-V74 HydrophobicContact CG1-CG1 3.99Å
73	Q	96.1	Very high	93.8	Very high	95 Å²	95	98.4 Å²	98.4	44%	0.444	50%	0.503	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-110.9	142.6	168.1	-53.2	-167.5	-1	0	0	108.8	A34 D35 I36 N69	A34-Q73 PolarHBondContact O-N 2.83Å; D35-Q73 WeakPolarHBondContact CA-O 3.15Å; D35-Q73 WeakPolarHBondContact OD1-CB 3.5Å; I36-Q73 PolarHBondContact N-O 3.46Å; N69-Q73 PolarHBondContact O-NE2 2.87Å
74	V	92.9	Very high	93.6	Very high	100 Å²	100	94 Å²	94	61%	0.606	49%	0.486	S	S	*	.			trans	-131.8	0	-175.9	-60.2	0	0	0	0	111.3	I36 F38 L62 V67 V72	I36-V74 HydrophobicContact CB-CG1 4.36Å; I36-V74 WeakPolarHBondContact O-CA 3.26Å; F38-V74 HydrophobicContact CE2-CB 4.11Å; F38-V74 HydrophobicContact CE2-CG1 3.93Å; L62-V74 HydrophobicContact CD2-CB 4.14Å; L62-V74 HydrophobicContact CD2-CG1 3.8Å; L62-V74 HydrophobicContact CD2-CG2 3.83Å; V67-V74 HydrophobicContact CG1-CG2 4.24Å; V67-V74 HydrophobicContact CG2-CG1 4.35Å; V72-V74 HydrophobicContact CG1-CG1 3.99Å

Retrieved 74 of 74 residues in 441.9 ms (Link to these results)

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