A0A087WQX4_MOUSE Loading...

Kruppel-like transcription factor 13

AlphaFold DB , UniProt , Accession A0A087WQX4, Species MOUSE (Mus musculus, Mouse), Gene Klf13, Length 52 aa.

>A0A087WQX4_MOUSE|A0A087WQX4|Klf13
MRSDHLTKHARRHANFHPGMLQRRGGGSRTGSLSDYSRSDASSPTISPASSP
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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M62.9Low82.3Confident189 Ų189112.8 Ų112.893%0.93154%0.539SS*.  097.60-149173.5-67.300107.6
2R72.1Confident83.2Confident205 Ų205119.6 Ų119.677%0.77456%0.555SS**  trans-126.6123-148.7-59.1-174.2174.696.5-1.3112.1D4R2-D4 PolarHBondContact O-N 2.94Å; R2-D4 VanDerWaalsContact O-OD1 3.12Å
3S72.3Confident83.8Confident88 Ų88118.4 Ų118.462%0.61555%0.55SS*.THydrogen-bonded Turntrans43.8-69.9174.161.20000119.3H5 L6 T7S3-H5 VanDerWaalsContact C-N 3.26Å; S3-H5 PolarHBondContact O-N 3.43Å; S3-L6 PolarHBondContact O-N 3.33Å; S3-T7 PolarHBondContact O-N 3.38Å; S3-T7 PolarHBondContact O-OG1 3.47Å
4D84.1Confident84.2Confident65 Ų65117.3 Ų117.335%0.34857%0.571SS.*Hα-helixtrans-61.9-38.5-17080-73.5000111.6R2 L6 T7 K8R2-D4 PolarHBondContact O-N 2.94Å; R2-D4 VanDerWaalsContact O-OD1 3.12Å; D4-L6 VanDerWaalsContact C-N 3.33Å; D4-L6 PolarHBondContact O-N 3.15Å; D4-T7 PolarHBondContact O-N 3.18Å; D4-K8 WeakPolarHBondContact O-CB 3.33Å; D4-K8 WeakPolarHBondContact O-CD 3.13Å; D4-K8 WeakPolarHBondContact O-CG 3.3Å; D4-K8 PolarHBondContact O-N 3.45Å; D4-K8 IonicContact OD2-NZ 2.94Å; D4-K8 PolarHBondContact OD2-NZ 2.99Å
5H90Very high84.5Confident117 Ų117118.5 Ų118.554%0.54258%0.582SS.*Hα-helixtrans-62.9-40.7176.8-65.680.5000111.2S3 H9S3-H5 VanDerWaalsContact C-N 3.26Å; S3-H5 PolarHBondContact O-N 3.43Å; H5-H9 WeakPolarHBondContact O-CB 3.36Å; H5-H9 PolarHBondContact O-N 3Å; H5-H9 VanDerWaalsContact O-N 3.08Å
6L83.8Confident84.7Confident106 Ų106114 Ų11456%0.55556%0.558SS**Hα-helixtrans-72.3-41.8179.7-61.1179000111.6S3 D4 H9 A10S3-L6 PolarHBondContact O-N 3.33Å; D4-L6 VanDerWaalsContact C-N 3.33Å; D4-L6 PolarHBondContact O-N 3.15Å; L6-H9 PolarHBondContact O-N 3.2Å; L6-A10 WeakPolarHBondContact O-CB 3.31Å; L6-A10 PolarHBondContact O-N 3.44Å
7T84Confident84.9Confident47 Ų47114.4 Ų114.429%0.28856%0.558SS.*Hα-helixtrans-64.3-42.9176.6-59.50000111.4S3 D4 A10 R11 L21S3-T7 PolarHBondContact O-N 3.38Å; S3-T7 PolarHBondContact O-OG1 3.47Å; D4-T7 PolarHBondContact O-N 3.18Å; T7-A10 PolarHBondContact O-N 3.16Å; T7-R11 WeakPolarHBondContact O-CG 3.22Å; T7-R11 PolarHBondContact O-N 3.23Å; T7-L21 HydrophobicContact CG2-CD2 4.05Å
8K90.3Very high84.6Confident112 Ų112112.8 Ų112.849%0.48756%0.558SS.*Hα-helixtrans-61.9-45.1176.3-76.3167.6-176.6161.80111.6D4 R11D4-K8 WeakPolarHBondContact O-CB 3.33Å; D4-K8 WeakPolarHBondContact O-CD 3.13Å; D4-K8 WeakPolarHBondContact O-CG 3.3Å; D4-K8 PolarHBondContact O-N 3.45Å; D4-K8 IonicContact OD2-NZ 2.94Å; D4-K8 PolarHBondContact OD2-NZ 2.99Å; K8-R11 PolarHBondContact O-N 3.34Å
9H92.4Very high84.5Confident117 Ų117108.6 Ų108.654%0.54255%0.547SS..Hα-helixtrans-60.5-47.6177.9176.572.9000111.6H5 L6 R11 R12 H13H5-H9 WeakPolarHBondContact O-CB 3.36Å; H5-H9 PolarHBondContact O-N 3Å; H5-H9 VanDerWaalsContact O-N 3.08Å; L6-H9 PolarHBondContact O-N 3.2Å; H9-R11 VanDerWaalsContact C-N 3.3Å; H9-R11 PolarHBondContact O-N 3.15Å; H9-R12 PolarHBondContact O-N 3.09Å; H9-H13 AromaticContact CD2-NE2 3.78Å; H9-H13 AromaticContact CE1-NE2 3.38Å; H9-H13 PolarHBondContact CE1-NE2 2.78Å; H9-H13 AromaticContact NE2-CD2 3.93Å; H9-H13 AromaticContact NE2-NE2 3.05Å; H9-H13 PolarHBondContact NE2-NE2 2.84Å; H9-H13 PolarHBondContact O-CD2 3.31Å
10A86.3Confident84.3Confident26 Ų26109.1 Ų109.122%0.21555%0.548CS..Hα-helixtrans-59.4-41.6-178.800000112L6 T7 R12 H13 F16L6-A10 WeakPolarHBondContact O-CB 3.31Å; L6-A10 PolarHBondContact O-N 3.44Å; T7-A10 PolarHBondContact O-N 3.16Å; A10-R12 PolarHBondContact O-N 3.06Å; A10-R12 VanDerWaalsContact O-N 3.09Å; A10-H13 PolarHBondContact O-N 3.3Å; A10-H13 VanDerWaalsContact O-N 3.15Å; A10-F16 HydrophobicContact CB-CD2 3.57Å; A10-F16 HydrophobicContact CB-CE2 3.37Å; A10-F16 HydrophobicContact CB-CG 4.42Å; A10-F16 HydrophobicContact CB-CZ 4.07Å; A10-F16 WeakPolarHBondContact O-CB 3.12Å; A10-F16 WeakPolarHBondContact O-CD2 3.49Å; A10-F16 WeakPolarHBondContact O-CG 3.4Å
11R87.7Confident83.8Confident169 Ų169108.8 Ų108.864%0.63855%0.548SS*.THydrogen-bonded Turntrans-63.5-14177.9-70.3176.168.3-165.91.5115.1T7 K8 H9 F16T7-R11 WeakPolarHBondContact O-CG 3.22Å; T7-R11 PolarHBondContact O-N 3.23Å; K8-R11 PolarHBondContact O-N 3.34Å; H9-R11 VanDerWaalsContact C-N 3.3Å; H9-R11 PolarHBondContact O-N 3.15Å; R11-F16 HydrophobicContact CG-CD1 4.19Å; R11-F16 HydrophobicContact CG-CE1 3.73Å; R11-F16 HydrophobicContact CG-CZ 4.33Å
12R92.3Very high84.3Confident194 Ų194106.5 Ų106.573%0.73254%0.535SS*.THydrogen-bonded Turntrans-88.4-6.9178.2-63.2-56.4-162.2-79.94113.4H9 A10H9-R12 PolarHBondContact O-N 3.09Å; A10-R12 PolarHBondContact O-N 3.06Å; A10-R12 VanDerWaalsContact O-N 3.09Å
13H91.7Very high83.8Confident104 Ų104106.6 Ų106.648%0.48154%0.535SS..SBendtrans-88.4140178.5-72.8-85.8000111.5H9 A10 N15 F16H9-H13 AromaticContact CD2-NE2 3.78Å; H9-H13 AromaticContact CE1-NE2 3.38Å; H9-H13 PolarHBondContact CE1-NE2 2.78Å; H9-H13 AromaticContact NE2-CD2 3.93Å; H9-H13 AromaticContact NE2-NE2 3.05Å; H9-H13 PolarHBondContact NE2-NE2 2.84Å; H9-H13 PolarHBondContact O-CD2 3.31Å; A10-H13 PolarHBondContact O-N 3.3Å; A10-H13 VanDerWaalsContact O-N 3.15Å; H13-N15 VanDerWaalsContact C-N 3.27Å; H13-N15 PolarHBondContact O-N 2.92Å; H13-F16 HydrophobicContact CB-CB 4.3Å; H13-F16 VanDerWaalsContact O-CB 3.3Å; H13-F16 WeakPolarHBondContact O-CB 3.34Å; H13-F16 PolarHBondContact O-N 3.27Å
14A88.9Confident83.2Confident103 Ų103111.4 Ų111.485%0.85154%0.54SS*.THydrogen-bonded Turntrans-64.3-31.1-179.400000113.3F16A14-F16 VanDerWaalsContact C-N 3.3Å; A14-F16 PolarHBondContact O-N 2.91Å
15N88.8Confident81.9Confident136 Ų136113 Ų11373%0.72757%0.572SS**THydrogen-bonded Turntrans-94.319.3-179.5-57.2-54.7000112.8H13 H17H13-N15 VanDerWaalsContact C-N 3.27Å; H13-N15 PolarHBondContact O-N 2.92Å; N15-H17 PolarHBondContact O-CD2 3.45Å; N15-H17 VanDerWaalsContact O-CD2 3.3Å
16F87.9Confident80.3Confident46 Ų46109.7 Ų109.720%0.20257%0.569CS.*  trans-83.4119.9179.2179.9-102.4000111A10 R11 H13 A14 M20A10-F16 HydrophobicContact CB-CD2 3.57Å; A10-F16 HydrophobicContact CB-CE2 3.37Å; A10-F16 HydrophobicContact CB-CG 4.42Å; A10-F16 HydrophobicContact CB-CZ 4.07Å; A10-F16 WeakPolarHBondContact O-CB 3.12Å; A10-F16 WeakPolarHBondContact O-CD2 3.49Å; A10-F16 WeakPolarHBondContact O-CG 3.4Å; R11-F16 HydrophobicContact CG-CD1 4.19Å; R11-F16 HydrophobicContact CG-CE1 3.73Å; R11-F16 HydrophobicContact CG-CZ 4.33Å; H13-F16 HydrophobicContact CB-CB 4.3Å; H13-F16 VanDerWaalsContact O-CB 3.3Å; H13-F16 WeakPolarHBondContact O-CB 3.34Å; H13-F16 PolarHBondContact O-N 3.27Å; A14-F16 VanDerWaalsContact C-N 3.3Å; A14-F16 PolarHBondContact O-N 2.91Å; F16-M20 HydrophobicContact CD2-CE 4.12Å; F16-M20 HydrophobicContact CD2-SD 4.05Å; F16-M20 HydrophobicContact CE2-CB 4.24Å; F16-M20 HydrophobicContact CE2-SD 4.49Å
17H87.3Confident79Confident120 Ų120107.5 Ų107.556%0.55657%0.572SS**  trans-107.5135.4175-58.9-77.8000110.3N15 G19 M20N15-H17 PolarHBondContact O-CD2 3.45Å; N15-H17 VanDerWaalsContact O-CD2 3.3Å; H17-G19 PolarHBondContact O-N 3.46Å; H17-M20 HydrophobicContact CB-CG 4.45Å; H17-M20 HydrophobicContact CB-SD 4.31Å; H17-M20 PolarHBondContact N-SD 2.91Å; H17-M20 VanDerWaalsContact N-SD 3.43Å; H17-M20 VanDerWaalsContact O-CB 3.31Å; H17-M20 WeakPolarHBondContact O-CB 3.36Å; H17-M20 WeakPolarHBondContact O-CG 3.43Å; H17-M20 PolarHBondContact O-N 3.03Å
18P79.7Confident77.7Confident87 Ų87110.6 Ų110.657%0.56560%0.596SS**THydrogen-bonded Turntrans-51.4-30.8178.8-27.834.2000114.1M20 L21 Q22P18-M20 PolarHBondContact O-N 3.22Å; P18-M20 VanDerWaalsContact O-N 3.15Å; P18-L21 PolarHBondContact O-N 3.08Å; P18-Q22 PolarHBondContact O-NE2 3.05Å
19G82.4Confident76.1Confident33 Ų33116.2 Ų116.234%0.3461%0.614SS.*Hα-helixtrans-53.9-26.8174.600000115.4H17 L21 Q22H17-G19 PolarHBondContact O-N 3.46Å; G19-L21 VanDerWaalsContact C-N 3.28Å; G19-L21 PolarHBondContact O-N 3.27Å; G19-Q22 VanDerWaalsContact CA-OE1 3.3Å; G19-Q22 PolarHBondContact O-N 3.33Å
20M80.5Confident74.3Confident118 Ų118116.3 Ų116.358%0.58162%0.623SS**Hα-helixtrans-69.1-26.6-178.4-64.1167.658.100112.6F16 H17 P18F16-M20 HydrophobicContact CD2-CE 4.12Å; F16-M20 HydrophobicContact CD2-SD 4.05Å; F16-M20 HydrophobicContact CE2-CB 4.24Å; F16-M20 HydrophobicContact CE2-SD 4.49Å; H17-M20 HydrophobicContact CB-CG 4.45Å; H17-M20 HydrophobicContact CB-SD 4.31Å; H17-M20 PolarHBondContact N-SD 2.91Å; H17-M20 VanDerWaalsContact N-SD 3.43Å; H17-M20 VanDerWaalsContact O-CB 3.31Å; H17-M20 WeakPolarHBondContact O-CB 3.36Å; H17-M20 WeakPolarHBondContact O-CG 3.43Å; H17-M20 PolarHBondContact O-N 3.03Å; P18-M20 PolarHBondContact O-N 3.22Å; P18-M20 VanDerWaalsContact O-N 3.15Å
21L75.3Confident72.9Confident102 Ų102117.7 Ų117.753%0.53464%0.639SS.*Hα-helixtrans-88.3-24.7176.9-174.762.3000112.7T7 P18 G19 R23T7-L21 HydrophobicContact CG2-CD2 4.05Å; P18-L21 PolarHBondContact O-N 3.08Å; G19-L21 VanDerWaalsContact C-N 3.28Å; G19-L21 PolarHBondContact O-N 3.27Å; L21-R23 PolarHBondContact O-N 2.97Å
22Q71.9Confident71.5Confident142 Ų142114.3 Ų114.366%0.66464%0.641SS**Hα-helixtrans-70.9-18.2-174.3-68.3151.124.600112.9P18 G19 R24P18-Q22 PolarHBondContact O-NE2 3.05Å; G19-Q22 VanDerWaalsContact CA-OE1 3.3Å; G19-Q22 PolarHBondContact O-N 3.33Å; Q22-R24 PolarHBondContact O-N 3.4Å; Q22-R24 VanDerWaalsContact O-N 3.16Å
23R62Low70Confident207 Ų207112.6 Ų112.678%0.78165%0.646SS**THydrogen-bonded Turntrans-69.2-8.2-174.4-75.3-83.7-60-69-2.2115.5L21L21-R23 PolarHBondContact O-N 2.97Å
24R60.6Low68.2Low189 Ų189111.8 Ų111.871%0.71365%0.652SS**  trans-163.283.7-177.5-100149.7-173.5-144.12.4111.3Q22 G26Q22-R24 PolarHBondContact O-N 3.4Å; Q22-R24 VanDerWaalsContact O-N 3.16Å; R24-G26 PolarHBondContact O-N 3.38Å
25G57Low66.8Low98 Ų98111.6 Ų111.6100%1.0164%0.637SS**SBendtrans-69.736.716000000113.1
26G56.5Low65.4Low47 Ų47115 Ų11549%0.48564%0.641SS.*SBendtrans-156.5110.3-17700000106.1R24R24-G26 PolarHBondContact O-N 3.38Å
27G54.7Low64.1Low61 Ų61118.6 Ų118.663%0.62967%0.671SS**  trans-47.7154.8-169.400000112.8R29G27-R29 PolarHBondContact O-N 2.6Å
28S57.8Low63Low111 Ų111122 Ų12278%0.77668%0.679SS**  trans-54.278.1162.5-56.80000109.7T30S28-T30 VanDerWaalsContact C-N 3.31Å
29R56.8Low62Low231 Ų231123 Ų12387%0.87269%0.688SS**  trans-104.940.7168.2-69.1-169.4170.8173.7-1.6108.5G27 G31G27-R29 PolarHBondContact O-N 2.6Å; R29-G31 PolarHBondContact O-N 2.91Å
30T55.1Low60.9Low119 Ų119128.7 Ų128.773%0.7371%0.711SS**  trans-70.370137.1118.60000104.4S28 S32S28-T30 VanDerWaalsContact C-N 3.31Å; T30-S32 PolarHBondContact O-N 2.81Å
31G55.6Low59.9Low54 Ų54127.4 Ų127.456%0.55772%0.719SS**  trans-59.7103.915800000103.1R29 L33R29-G31 PolarHBondContact O-N 2.91Å; G31-L33 PolarHBondContact O-N 2.93Å
32S58.3Low59.2Low98 Ų98127.8 Ų127.869%0.68573%0.731SS**  trans-54.3100.8154.5-175.40000103.2T30 S34T30-S32 PolarHBondContact O-N 2.81Å; S32-S34 PolarHBondContact O-N 2.94Å
33L60.4Low58.4Low159 Ų159126.3 Ų126.383%0.83274%0.736SS**  trans-65.478.8169.4-76.6157.6000104.2G31 D35G31-L33 PolarHBondContact O-N 2.93Å; L33-D35 PolarHBondContact O-N 2.76Å
34S54.9Low58.3Low86 Ų86121.6 Ų121.660%0.60173%0.732SS**  trans-69.192.8165.3-58.80000105S32 Y36S32-S34 PolarHBondContact O-N 2.94Å; S34-Y36 PolarHBondContact O-N 3.18Å
35D59.7Low58.4Low99 Ų99119.2 Ų119.253%0.52974%0.739SS.*G310 helixtrans-599.6173.5-119.6-78.9000113.4L33 R38L33-D35 PolarHBondContact O-N 2.76Å; D35-R38 IonicContact OD1-CZ 2.78Å; D35-R38 VanDerWaalsContact OD1-CZ 3.27Å; D35-R38 IonicContact OD1-NE 2.78Å; D35-R38 PolarHBondContact OD1-NE 2.78Å; D35-R38 IonicContact OD1-NH2 3.27Å; D35-R38 PolarHBondContact OD1-NH2 2.94Å
36Y59.7Low58.5Low209 Ų209121.1 Ų121.182%0.8273%0.725SS**G310 helixtrans-89.55.8-172.4-112-85.5000114.9S34S34-Y36 PolarHBondContact O-N 3.18Å
37S60.7Low58.8Low120 Ų120124.8 Ų124.884%0.83974%0.742SS**G310 helixtrans-96.115.4171.5-61.10000113.6S39S37-S39 PolarHBondContact O-N 2.84Å
38R62.7Low59Low191 Ų191127 Ų12772%0.72175%0.746SS**  trans-8556.8165.3-52.2-168.5-155.1-154.85.3110.6D35 D40D35-R38 IonicContact OD1-CZ 2.78Å; D35-R38 VanDerWaalsContact OD1-CZ 3.27Å; D35-R38 IonicContact OD1-NE 2.78Å; D35-R38 PolarHBondContact OD1-NE 2.78Å; D35-R38 IonicContact OD1-NH2 3.27Å; D35-R38 PolarHBondContact OD1-NH2 2.94Å; R38-D40 VanDerWaalsContact C-N 3.3Å
39S59.1Low59.1Low108 Ų108125.5 Ų125.576%0.75574%0.74SS**THydrogen-bonded Turntrans-95.227.6173.1-64.10000112.9S37S37-S39 PolarHBondContact O-N 2.84Å
40D58.7Low58.8Low153 Ų153120.7 Ų120.782%0.81874%0.742SS**THydrogen-bonded Turntrans-97.1-9.9172.1-165.9-112.6000112.7R38 S42R38-D40 VanDerWaalsContact C-N 3.3Å; D40-S42 VanDerWaalsContact C-N 3.33Å; D40-S42 PolarHBondContact O-N 3.32Å
41A60.8Low58.6Low91 Ų91120 Ų12075%0.75274%0.742SS**SBendtrans-93.131.8-177.200000114
42S59.4Low58.9Low111 Ų111127 Ų12778%0.77678%0.778SS**  trans-146.652.2173.9-64.20000112.3D40 P44D40-S42 VanDerWaalsContact C-N 3.33Å; D40-S42 PolarHBondContact O-N 3.32Å; S42-P44 VanDerWaalsContact O-CD 3.25Å; S42-P44 WeakPolarHBondContact O-CD 3.25Å
43S56.7Low58.9Low111 Ų111128.5 Ų128.578%0.77678%0.782SS**  trans-85.1104.8147.5-84.20000107.7T45S43-T45 PolarHBondContact O-N 2.89Å
44P58.3Low58.8Low107 Ų107126.8 Ų126.870%0.69578%0.78SS**  trans-64.9121.9164.129-30.4000106.8S42 I46S42-P44 VanDerWaalsContact O-CD 3.25Å; S42-P44 WeakPolarHBondContact O-CD 3.25Å; P44-I46 VanDerWaalsContact C-N 3.31Å; P44-I46 PolarHBondContact O-N 3.19Å
45T64.5Low59.1Low139 Ų139129.1 Ų129.185%0.85379%0.789SS**  trans-60.891.5169.155.60000108.8S43S43-T45 PolarHBondContact O-N 2.89Å
46I59.2Low59Low139 Ų139130.9 Ų130.971%0.71381%0.805SS**  trans-135.482.9166.7-54.7-179.9000107.6P44P44-I46 VanDerWaalsContact C-N 3.31Å; P44-I46 PolarHBondContact O-N 3.19Å
47S61Low59Low123 Ų123126 Ų12686%0.8680%0.804SS**  trans-93.3126.5143.3-64.40000106.1
48P59.9Low58.9Low108 Ų108126.4 Ų126.470%0.70180%0.801SS**  -137.2133.6118.232.9-19.6000112.7
49A59.9Low58.6Low79 Ų79121.8 Ų121.865%0.65381%0.807SS**  trans23.5128.1145.300000119.9
50S51.2Low58.6Low130 Ų130122.8 Ų122.891%0.90981%0.811SS**  -134.8120.3119.4-84.90000109.8
51S50Low58.6Low105 Ų105120.3 Ų120.373%0.73481%0.811SS**  trans-77.8-170.7173.2-48.80000111.2
52P61.8Low58.3Low201 Ų201123 Ų123100%1.30582%0.816SS**  -65.60-106.237.8-34.4000116.3

Retrieved 52 of 52 residues in 69.9 ms (Link to these results)