A0A087WQZ6_MOUSE Loading...

Eph receptor A4

AlphaFold DB , UniProt , Accession A0A087WQZ6, Species MOUSE (Mus musculus, Mouse), Gene Epha4, Length 38 aa.

>A0A087WQZ6_MOUSE|A0A087WQZ6|Epha4
MAGIFYFILFSFLFGICDAVTGSRVYPANEVGGSEHYG
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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M65.5Low85.7Confident221 Ų221118.5 Ų118.5100%1.08961%0.611SS**  0-38.20-80.6176.3177.100113.6I4M1-I4 VanDerWaalsContact O-CG1 3.27Å; M1-I4 WeakPolarHBondContact O-CG1 3.24Å
2A77.3Confident86.1Confident62 Ų62120.7 Ų120.751%0.51261%0.613SS.*Hα-helixtrans-69.7-32.7-179.400000115.1I4 F5 Y6A2-I4 PolarHBondContact O-N 3.21Å; A2-F5 WeakPolarHBondContact O-CB 3.42Å; A2-F5 PolarHBondContact O-N 3.29Å; A2-F5 VanDerWaalsContact O-N 3.16Å; A2-Y6 HydrophobicContact CB-CD2 4.5Å; A2-Y6 HydrophobicContact CB-CE2 4.04Å; A2-Y6 WeakPolarHBondContact O-CD2 3.48Å; A2-Y6 PolarHBondContact O-N 2.93Å
3G81.5Confident86.3Confident55 Ų55119.9 Ų119.957%0.56761%0.611SS**Hα-helixtrans-61.7-41.1-175.500000115F5 Y6 F7G3-F5 VanDerWaalsContact C-N 3.26Å; G3-F5 PolarHBondContact O-N 2.92Å; G3-Y6 PolarHBondContact O-N 3.46Å; G3-F7 PolarHBondContact O-N 3Å; G3-F7 VanDerWaalsContact O-N 3.11Å
4I90.9Very high86.4Confident128 Ų128121.1 Ų121.166%0.65661%0.61SS**Hα-helixtrans-65.6-32.4177.457.9160.9000111.9M1 A2 F7 I8M1-I4 VanDerWaalsContact O-CG1 3.27Å; M1-I4 WeakPolarHBondContact O-CG1 3.24Å; A2-I4 PolarHBondContact O-N 3.21Å; I4-F7 PolarHBondContact O-N 2.8Å; I4-I8 WeakPolarHBondContact O-CG1 3.44Å; I4-I8 PolarHBondContact O-N 3.05Å
5F87.3Confident86.5Confident136 Ų136115.5 Ų115.560%0.59660%0.595SS**Hα-helixtrans-68.4-43.4-179.4-167.8-100.9000110.7A2 G3 F7 I8 L9A2-F5 WeakPolarHBondContact O-CB 3.42Å; A2-F5 PolarHBondContact O-N 3.29Å; A2-F5 VanDerWaalsContact O-N 3.16Å; G3-F5 VanDerWaalsContact C-N 3.26Å; G3-F5 PolarHBondContact O-N 2.92Å; F5-F7 PolarHBondContact O-N 3.02Å; F5-I8 PolarHBondContact O-N 3.38Å; F5-L9 HydrophobicContact CD1-CD1 3.69Å; F5-L9 HydrophobicContact CD1-CG 4.41Å; F5-L9 HydrophobicContact CE1-CD1 3.45Å; F5-L9 VanDerWaalsContact CE1-CD1 3.45Å; F5-L9 HydrophobicContact CE1-CG 4.28Å; F5-L9 HydrophobicContact CZ-CD1 4.19Å; F5-L9 VanDerWaalsContact O-CG 3.31Å; F5-L9 WeakPolarHBondContact O-CG 3.27Å; F5-L9 PolarHBondContact O-N 2.85Å
6Y88.8Confident86.6Confident162 Ų162114.1 Ų114.164%0.63559%0.587SS**Hα-helixtrans-64.5-38.6173.6-67.4-67.9000112.8A2 G3 L9 F10A2-Y6 HydrophobicContact CB-CD2 4.5Å; A2-Y6 HydrophobicContact CB-CE2 4.04Å; A2-Y6 WeakPolarHBondContact O-CD2 3.48Å; A2-Y6 PolarHBondContact O-N 2.93Å; G3-Y6 PolarHBondContact O-N 3.46Å; Y6-L9 PolarHBondContact O-N 2.92Å; Y6-F10 VanDerWaalsContact O-CB 3.27Å; Y6-F10 WeakPolarHBondContact O-CB 3.27Å; Y6-F10 PolarHBondContact O-N 3.39Å
7F89.1Confident86.4Confident145 Ų145111.4 Ų111.464%0.63658%0.58SS**Hα-helixtrans-64.5-42.7178.9-170.3-94.7000112.3G3 I4 F5 S11G3-F7 PolarHBondContact O-N 3Å; G3-F7 VanDerWaalsContact O-N 3.11Å; I4-F7 PolarHBondContact O-N 2.8Å; F5-F7 PolarHBondContact O-N 3.02Å; F7-S11 WeakPolarHBondContact O-CB 3.42Å; F7-S11 PolarHBondContact O-N 3.49Å; F7-S11 PolarHBondContact O-OG 3.32Å
8I90.3Very high86.2Confident105 Ų105111.2 Ų111.254%0.53858%0.58SS.*Hα-helixtrans-64.8-48176.9-65.6-77.7000110.4I4 F5 F10 S11 F12I4-I8 WeakPolarHBondContact O-CG1 3.44Å; I4-I8 PolarHBondContact O-N 3.05Å; F5-I8 PolarHBondContact O-N 3.38Å; I8-F10 VanDerWaalsContact C-N 3.35Å; I8-F10 PolarHBondContact O-N 2.73Å; I8-S11 PolarHBondContact O-N 3.45Å; I8-F12 WeakPolarHBondContact O-CB 3.37Å; I8-F12 PolarHBondContact O-N 2.93Å
9L91.5Very high85.9Confident92 Ų92108.6 Ų108.648%0.48258%0.576SS.*Hα-helixtrans-61.2-42.9179.2-72.9176.6000112.3F5 Y6 F12 L13F5-L9 HydrophobicContact CD1-CD1 3.69Å; F5-L9 HydrophobicContact CD1-CG 4.41Å; F5-L9 HydrophobicContact CE1-CD1 3.45Å; F5-L9 VanDerWaalsContact CE1-CD1 3.45Å; F5-L9 HydrophobicContact CE1-CG 4.28Å; F5-L9 HydrophobicContact CZ-CD1 4.19Å; F5-L9 VanDerWaalsContact O-CG 3.31Å; F5-L9 WeakPolarHBondContact O-CG 3.27Å; F5-L9 PolarHBondContact O-N 2.85Å; Y6-L9 PolarHBondContact O-N 2.92Å; L9-F12 PolarHBondContact O-N 2.93Å; L9-L13 WeakPolarHBondContact O-CB 3.38Å; L9-L13 PolarHBondContact O-N 3.25Å
10F88.8Confident85.5Confident143 Ų143106.6 Ų106.663%0.62757%0.568SS**Hα-helixtrans-63.1-45.1177.8-177.2-97.3000111.9Y6 I8 F12 L13 F14Y6-F10 VanDerWaalsContact O-CB 3.27Å; Y6-F10 WeakPolarHBondContact O-CB 3.27Å; Y6-F10 PolarHBondContact O-N 3.39Å; I8-F10 VanDerWaalsContact C-N 3.35Å; I8-F10 PolarHBondContact O-N 2.73Å; F10-F12 VanDerWaalsContact C-N 3.34Å; F10-F12 PolarHBondContact O-N 3.4Å; F10-L13 PolarHBondContact O-N 2.97Å; F10-F14 WeakPolarHBondContact O-CB 3.35Å; F10-F14 PolarHBondContact O-N 2.89Å
11S91.3Very high85Confident55 Ų55105.3 Ų105.339%0.38557%0.565SS.*Hα-helixtrans-63.6-39.8177.7-55.80000112F7 I8 G15F7-S11 WeakPolarHBondContact O-CB 3.42Å; F7-S11 PolarHBondContact O-N 3.49Å; F7-S11 PolarHBondContact O-OG 3.32Å; I8-S11 PolarHBondContact O-N 3.45Å; S11-G15 PolarHBondContact O-N 2.74Å
12F90.6Very high85.1Confident144 Ų14496.4 Ų96.463%0.63253%0.529SS*.Hα-helixtrans-64-46176.4-125.5-93.6000111.7I8 L9 F10 G15 I16I8-F12 WeakPolarHBondContact O-CB 3.37Å; I8-F12 PolarHBondContact O-N 2.93Å; L9-F12 PolarHBondContact O-N 2.93Å; F10-F12 VanDerWaalsContact C-N 3.34Å; F10-F12 PolarHBondContact O-N 3.4Å; F12-G15 PolarHBondContact O-N 3.25Å; F12-I16 HydrophobicContact CD1-CD1 3.96Å; F12-I16 VanDerWaalsContact O-CG1 3.29Å; F12-I16 WeakPolarHBondContact O-CG1 3.42Å; F12-I16 PolarHBondContact O-N 3.46Å
13L89.1Confident84.3Confident111 Ų11197.8 Ų97.858%0.58154%0.535SS*.Hα-helixtrans-63.6-44.9178.7-172.265.8000111.1L9 F10 G15 I16 C17L9-L13 WeakPolarHBondContact O-CB 3.38Å; L9-L13 PolarHBondContact O-N 3.25Å; F10-L13 PolarHBondContact O-N 2.97Å; L13-G15 PolarHBondContact O-N 2.95Å; L13-I16 PolarHBondContact O-N 2.81Å; L13-C17 WeakPolarHBondContact O-CB 3.46Å; L13-C17 PolarHBondContact O-N 3.5Å; L13-C17 PolarHBondContact O-SG 2.93Å
14F87.3Confident83.2Confident136 Ų136104.7 Ų104.760%0.59654%0.544SS*.Hα-helixtrans-59.8-45.9176.7-176.2-100000111.9F10 I16 C17 D18F10-F14 WeakPolarHBondContact O-CB 3.35Å; F10-F14 PolarHBondContact O-N 2.89Å; F14-I16 PolarHBondContact O-N 2.96Å; F14-C17 PolarHBondContact O-N 3.34Å; F14-D18 WeakPolarHBondContact O-CB 3.08Å; F14-D18 PolarHBondContact O-N 3.48Å
15G87.9Confident81.5Confident38 Ų38103.6 Ų103.639%0.39254%0.543SS..Hα-helixtrans-62.7-38.8177.600000113.6S11 F12 L13 A19S11-G15 PolarHBondContact O-N 2.74Å; F12-G15 PolarHBondContact O-N 3.25Å; L13-G15 PolarHBondContact O-N 2.95Å; G15-A19 WeakPolarHBondContact O-CB 3.28Å; G15-A19 PolarHBondContact O-N 3.34Å
16I88Confident79.9Confident92 Ų92106 Ų10647%0.47255%0.549SS..Hα-helixtrans-69.6-42.3176.4-64.8163.9000110.8F12 L13 F14 D18 A19 V20F12-I16 HydrophobicContact CD1-CD1 3.96Å; F12-I16 VanDerWaalsContact O-CG1 3.29Å; F12-I16 WeakPolarHBondContact O-CG1 3.42Å; F12-I16 PolarHBondContact O-N 3.46Å; L13-I16 PolarHBondContact O-N 2.81Å; F14-I16 PolarHBondContact O-N 2.96Å; I16-D18 VanDerWaalsContact C-N 3.33Å; I16-D18 PolarHBondContact O-N 3.05Å; I16-A19 PolarHBondContact O-N 3.35Å; I16-V20 HydrophobicContact CG2-CG2 4.28Å; I16-V20 WeakPolarHBondContact O-CB 3.47Å; I16-V20 VanDerWaalsContact O-CG2 3.28Å; I16-V20 WeakPolarHBondContact O-CG2 3.27Å; I16-V20 PolarHBondContact O-N 3.47Å
17C84.3Confident78.1Confident69 Ų69101.9 Ų101.947%0.46654%0.543SS..Hα-helixtrans-61.6-42.2176.6-710000111.9L13 F14 V20 T21L13-C17 WeakPolarHBondContact O-CB 3.46Å; L13-C17 PolarHBondContact O-N 3.5Å; L13-C17 PolarHBondContact O-SG 2.93Å; F14-C17 PolarHBondContact O-N 3.34Å; C17-V20 PolarHBondContact O-N 3.45Å; C17-T21 VanDerWaalsContact O-CB 3.27Å; C17-T21 WeakPolarHBondContact O-CB 3.45Å; C17-T21 PolarHBondContact O-N 2.96Å; C17-T21 PolarHBondContact O-OG1 3.46Å
18D81.6Confident76.4Confident107 Ų10798.4 Ų98.457%0.57254%0.541SS*.Hα-helixtrans-64.6-44.3175.4-170.972.2000111.5F14 I16 V20 T21 G22F14-D18 WeakPolarHBondContact O-CB 3.08Å; F14-D18 PolarHBondContact O-N 3.48Å; I16-D18 VanDerWaalsContact C-N 3.33Å; I16-D18 PolarHBondContact O-N 3.05Å; D18-V20 PolarHBondContact O-N 3.05Å; D18-T21 PolarHBondContact O-N 3.39Å; D18-G22 PolarHBondContact O-N 3.33Å
19A81.3Confident74.8Confident62 Ų62100.2 Ų100.251%0.51255%0.552SS.*Hα-helixtrans-63-42176.100000112.9G15 I16 S23G15-A19 WeakPolarHBondContact O-CB 3.28Å; G15-A19 PolarHBondContact O-N 3.34Å; I16-A19 PolarHBondContact O-N 3.35Å; A19-S23 WeakPolarHBondContact O-CB 3.44Å; A19-S23 PolarHBondContact O-N 3.4Å
20V77.5Confident72.9Confident69 Ų69103.4 Ų103.442%0.41856%0.564SS.*Hα-helixtrans-68.7-36.9177172.40000111.3I16 C17 D18 R24I16-V20 HydrophobicContact CG2-CG2 4.28Å; I16-V20 WeakPolarHBondContact O-CB 3.47Å; I16-V20 VanDerWaalsContact O-CG2 3.28Å; I16-V20 WeakPolarHBondContact O-CG2 3.27Å; I16-V20 PolarHBondContact O-N 3.47Å; C17-V20 PolarHBondContact O-N 3.45Å; D18-V20 PolarHBondContact O-N 3.05Å; V20-R24 WeakPolarHBondContact O-CB 3.19Å; V20-R24 WeakPolarHBondContact O-CG 3.47Å; V20-R24 PolarHBondContact O-N 3.11Å
21T75.8Confident71.1Confident80 Ų80102.1 Ų102.149%0.49157%0.568SS.*Hα-helixtrans-73.2-47.4178.3-56.40000110.6C17 D18 S23 R24 V25C17-T21 VanDerWaalsContact O-CB 3.27Å; C17-T21 WeakPolarHBondContact O-CB 3.45Å; C17-T21 PolarHBondContact O-N 2.96Å; C17-T21 PolarHBondContact O-OG1 3.46Å; D18-T21 PolarHBondContact O-N 3.39Å; T21-S23 VanDerWaalsContact C-N 3.29Å; T21-S23 PolarHBondContact O-N 3.41Å; T21-R24 CarbonylContact O-C 3.48Å; T21-R24 WeakPolarHBondContact O-CA 3.29Å; T21-R24 PolarHBondContact O-N 3.38Å; T21-V25 HydrophobicContact CG2-CG2 4.25Å; T21-V25 WeakPolarHBondContact O-CB 3.04Å; T21-V25 VanDerWaalsContact O-CG2 3.24Å; T21-V25 WeakPolarHBondContact O-CG2 3.39Å; T21-V25 PolarHBondContact O-N 3.02Å
22G66.8Low69.1Low34 Ų34103 Ų10335%0.35159%0.586SS.*Hα-helixtrans-61.2-35.3173.700000112.7D18 R24 V25 Y26D18-G22 PolarHBondContact O-N 3.33Å; G22-R24 VanDerWaalsContact C-N 3.33Å; G22-V25 CarbonylContact O-C 3.59Å; G22-V25 PolarHBondContact O-N 3.48Å; G22-Y26 PolarHBondContact O-N 2.97Å
23S61.5Low67Low91 Ų9198.9 Ų98.964%0.63658%0.584SS**Hα-helixtrans-71.4-26.4172.7-176.10000113.1A19 T21A19-S23 WeakPolarHBondContact O-CB 3.44Å; A19-S23 PolarHBondContact O-N 3.4Å; T21-S23 VanDerWaalsContact C-N 3.29Å; T21-S23 PolarHBondContact O-N 3.41Å
24R57.7Low65.5Low199 Ų19999.4 Ų99.475%0.75160%0.597SS**Hα-helixtrans-86.4-20.4173-78.7-171.5144.990.74113.5V20 T21 G22 Y26 P27V20-R24 WeakPolarHBondContact O-CB 3.19Å; V20-R24 WeakPolarHBondContact O-CG 3.47Å; V20-R24 PolarHBondContact O-N 3.11Å; T21-R24 CarbonylContact O-C 3.48Å; T21-R24 WeakPolarHBondContact O-CA 3.29Å; T21-R24 PolarHBondContact O-N 3.38Å; G22-R24 VanDerWaalsContact C-N 3.33Å; R24-Y26 VanDerWaalsContact C-N 3.31Å; R24-P27 WeakPolarHBondContact O-CD 3.31Å
25V55.1Low64.2Low105 Ų105100.7 Ų100.764%0.63661%0.605SS**SBendtrans-95.813.8176.2-178.20000111.3T21 G22T21-V25 HydrophobicContact CG2-CG2 4.25Å; T21-V25 WeakPolarHBondContact O-CB 3.04Å; T21-V25 VanDerWaalsContact O-CG2 3.24Å; T21-V25 WeakPolarHBondContact O-CG2 3.39Å; T21-V25 PolarHBondContact O-N 3.02Å; G22-V25 CarbonylContact O-C 3.59Å; G22-V25 PolarHBondContact O-N 3.48Å
26Y53.7Low62.3Low186 Ų186106.9 Ų106.973%0.72962%0.623SS**  trans-118.187.5155.1-84.9-85.2000111G22 R24 A28G22-Y26 PolarHBondContact O-N 2.97Å; R24-Y26 VanDerWaalsContact C-N 3.31Å; Y26-A28 HydrophobicContact CD1-CB 3.83Å; Y26-A28 HydrophobicContact CE1-CB 4.13Å
27P51.3Low60.4Low76 Ų76114.3 Ų114.349%0.49465%0.647SS.*  -109.559129.936.7-30.2000107.9R24 N29 E30R24-P27 WeakPolarHBondContact O-CD 3.31Å; P27-N29 PolarHBondContact O-N 3.36Å; P27-E30 HydrophobicContact CB-CG 4.12Å; P27-E30 VanDerWaalsContact O-CG 3.27Å; P27-E30 WeakPolarHBondContact O-CG 3.27Å
28A53.2Low58.4Low73 Ų73116.9 Ų116.960%0.60369%0.685SS**THydrogen-bonded Turntrans-89.523.916600000111.5Y26Y26-A28 HydrophobicContact CD1-CB 3.83Å; Y26-A28 HydrophobicContact CE1-CB 4.13Å
29N56.3Low57.3Low143 Ų143117.4 Ų117.477%0.76569%0.691SS**THydrogen-bonded Turntrans-115.421.2165.4-162.177.6000112.3P27 V31P27-N29 PolarHBondContact O-N 3.36Å; N29-V31 PolarHBondContact O-N 3.5Å
30E51.7Low56Low159 Ų159120.3 Ų120.374%0.74370%0.7SS**  trans-84.347.61538.9-172.3127.500109.5P27 G32P27-E30 HydrophobicContact CB-CG 4.12Å; P27-E30 VanDerWaalsContact O-CG 3.27Å; P27-E30 WeakPolarHBondContact O-CG 3.27Å; E30-G32 PolarHBondContact O-N 3.07Å
31V50.5Low54.8Low116 Ų116123.2 Ų123.270%0.70372%0.716SS**  trans-62.895.3144.4178.90000104.5N29 G33N29-V31 PolarHBondContact O-N 3.5Å; V31-G33 PolarHBondContact O-N 3.16Å
32G50.5Low53.6Low73 Ų73125.7 Ų125.775%0.75373%0.729SS**  trans-49112.3161.200000108.5E30E30-G32 PolarHBondContact O-N 3.07Å
33G45.1Very low52.7Low58 Ų58131.4 Ų131.460%0.59875%0.753SS**  trans-14647.1172.100000108.6V31 E35V31-G33 PolarHBondContact O-N 3.16Å; G33-E35 PolarHBondContact O-N 3.28Å
34S58.7Low52.2Low121 Ų121134.1 Ų134.185%0.84676%0.761SS**  trans-69.770.6164.451.90000109.5
35E60.5Low51.8Low164 Ų164129.5 Ų129.577%0.76676%0.761SS**  trans-174.276166.450.9-175.1115.300113G33G33-E35 PolarHBondContact O-N 3.28Å
36H46.6Very low51.5Low167 Ų167131.4 Ų131.477%0.77377%0.771SS**  trans-166.487.4134-120.164.7000110.3
37Y48.3Very low51.3Low248 Ų248126.8 Ų126.897%0.97378%0.775SS**  trans-73109.2138.3-170.7-87.8000105.5
38G43.4Very low51.3Low124 Ų124131.5 Ų131.5100%1.27880%0.8SS**  trans1720-17900000111

Retrieved 38 of 38 residues in 86.8 ms (Link to these results)