A0A087WR04_MOUSE Loading...

LEM domain containing 1

AlphaFold DB , UniProt , Accession A0A087WR04, Species MOUSE (Mus musculus, Mouse), Gene Lemd1, Length 69 aa.

						>A0A087WR04_MOUSE|A0A087WR04|Lemd1
MVDVKCLSDYELHKHLMKLGFTPGPILPSTRKTYEKKLVQLLASPPWKPPVMKRPTRPHGSEDSDDSEV
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	61.2	Low	81	Confident	244 Å²	244	98 Å²	98	100%	1.202	50%	0.503	S	S	*	.				0	134.6	0	-85.9	169.2	149.3	0	0	107.7	D3	M1-D3 PolarHBondContact O-N 3.24Å
2	V	68.1	Low	81.6	Confident	69 Å²	69	90.1 Å²	90.1	42%	0.418	46%	0.462	S	S	.	.			trans	-73.5	117	173.7	177.3	0	0	0	0	107.4	V4 L7 L42	V2-V4 PolarHBondContact O-N 3.36Å; V2-V4 VanDerWaalsContact O-N 3.14Å; V2-L7 HydrophobicContact CG1-CD1 4.05Å; V2-L7 HydrophobicContact CG1-CD2 4.36Å; V2-L42 HydrophobicContact CB-CD1 4.27Å
3	D	79.3	Confident	82.1	Confident	91 Å²	91	87.8 Å²	87.8	49%	0.487	45%	0.448	S	S	.	.			trans	-80.9	94.9	174.9	-164.2	-15.3	0	0	0	109.7	M1 K5 C6 L7	M1-D3 PolarHBondContact O-N 3.24Å; D3-K5 PolarHBondContact O-N 2.72Å; D3-K5 VanDerWaalsContact O-N 3.17Å; D3-K5 PolarHBondContact OD1-N 3.41Å; D3-K5 VanDerWaalsContact OD1-N 3.14Å; D3-C6 HydrophobicContact CB-CB 4.17Å; D3-C6 PolarHBondContact O-N 3.09Å; D3-C6 VanDerWaalsContact O-N 3.09Å; D3-L7 PolarHBondContact O-N 2.97Å
4	V	80.1	Confident	82.6	Confident	19 Å²	19	87.9 Å²	87.9	12%	0.115	44%	0.444	C	S	.	.	T	Hydrogen-bonded Turn	trans	-53.7	-29.7	177.9	-97.9	0	0	0	0	113.7	V2 L7 E35 L38 V39	V2-V4 PolarHBondContact O-N 3.36Å; V2-V4 VanDerWaalsContact O-N 3.14Å; V4-L7 HydrophobicContact CG1-CD1 4.39Å; V4-E35 HydrophobicContact CB-CB 4.36Å; V4-E35 HydrophobicContact CB-CG 4.46Å; V4-L38 HydrophobicContact CG1-CB 3.89Å; V4-L38 HydrophobicContact CG1-CD2 3.67Å; V4-L38 HydrophobicContact CG1-CG 3.76Å; V4-V39 HydrophobicContact CB-CG2 4.17Å; V4-V39 HydrophobicContact CG1-CG2 3.86Å; V4-V39 HydrophobicContact CG2-CG2 3.34Å
5	K	79.4	Confident	82.9	Confident	166 Å²	166	84.9 Å²	84.9	72%	0.722	43%	0.427	S	S	*	.	T	Hydrogen-bonded Turn	trans	-81.1	-19.2	-178.9	-71.6	-173.8	176.3	179.9	0	113.3	D3	D3-K5 PolarHBondContact O-N 2.72Å; D3-K5 VanDerWaalsContact O-N 3.17Å; D3-K5 PolarHBondContact OD1-N 3.41Å; D3-K5 VanDerWaalsContact OD1-N 3.14Å
6	C	83.3	Confident	83.2	Confident	105 Å²	105	79.6 Å²	79.6	71%	0.709	40%	0.401	S	S	*	.	S	Bend	trans	-90.9	-5.8	175.2	-68.3	0	0	0	0	112.7	D3	D3-C6 HydrophobicContact CB-CB 4.17Å; D3-C6 PolarHBondContact O-N 3.09Å; D3-C6 VanDerWaalsContact O-N 3.09Å
7	L	84.5	Confident	83.4	Confident	37 Å²	37	80.7 Å²	80.7	19%	0.194	41%	0.406	C	S	.	.			trans	-72.4	137.6	175.9	-61.8	179.3	0	0	0	110.3	V2 D3 V4 E11 L12 L38	V2-L7 HydrophobicContact CG1-CD1 4.05Å; V2-L7 HydrophobicContact CG1-CD2 4.36Å; D3-L7 PolarHBondContact O-N 2.97Å; V4-L7 HydrophobicContact CG1-CD1 4.39Å; L7-E11 HydrophobicContact CB-CB 4.19Å; L7-E11 HydrophobicContact CD2-CB 4.06Å; L7-L12 HydrophobicContact CB-CB 4.4Å; L7-L38 HydrophobicContact CD1-CD2 3.6Å
8	S	88.3	Confident	83.6	Confident	61 Å²	61	84.7 Å²	84.7	43%	0.427	42%	0.42	S	S	.	.			trans	-70.2	163.6	165.8	73.8	0	0	0	0	110.2	Y10 E11 L12	S8-Y10 PolarHBondContact O-N 2.88Å; S8-E11 PolarHBondContact O-N 3Å; S8-E11 VanDerWaalsContact O-N 3.09Å; S8-E11 PolarHBondContact OG-N 3.46Å; S8-L12 WeakPolarHBondContact O-CB 3.47Å; S8-L12 PolarHBondContact O-N 3.33Å
9	D	89.1	Confident	83.6	Confident	59 Å²	59	84.1 Å²	84.1	32%	0.316	42%	0.418	S	S	.	.	H	α-helix	trans	-54	-39.7	176	-65.1	-38.4	0	0	0	112.3	H13 I26 R31	D9-H13 VanDerWaalsContact O-CB 3.31Å; D9-H13 WeakPolarHBondContact O-CB 3.36Å; D9-H13 PolarHBondContact O-N 2.98Å; D9-I26 HydrophobicContact CB-CB 4.28Å; D9-I26 HydrophobicContact CB-CG2 4.06Å; D9-I26 VanDerWaalsContact OD1-CG2 3.27Å; D9-I26 WeakPolarHBondContact OD1-CG2 3.31Å; D9-R31 IonicContact OD1-CZ 3.78Å; D9-R31 IonicContact OD1-NE 2.76Å; D9-R31 PolarHBondContact OD1-NE 3.2Å; D9-R31 IonicContact OD1-NH2 2.72Å; D9-R31 PolarHBondContact OD1-NH2 3.38Å; D9-R31 IonicContact OD2-CZ 2.68Å; D9-R31 IonicContact OD2-NH2 3.07Å; D9-R31 PolarHBondContact OD2-NH2 2.68Å
10	Y	88.4	Confident	83.7	Confident	157 Å²	157	83.4 Å²	83.4	62%	0.616	43%	0.434	S	S	*	.	H	α-helix	trans	-66.4	-44.9	178	179.6	-101.9	0	0	0	112.3	S8 H13 K14	S8-Y10 PolarHBondContact O-N 2.88Å; Y10-H13 WeakPolarHBondContact O-CB 3.48Å; Y10-H13 PolarHBondContact O-N 3.38Å; Y10-K14 WeakPolarHBondContact O-CB 3.46Å; Y10-K14 PolarHBondContact O-N 3.44Å
11	E	89.7	Confident	83.7	Confident	70 Å²	70	82.9 Å²	82.9	33%	0.327	43%	0.428	S	S	.	.	H	α-helix	trans	-67.9	-38.2	179.3	-72.2	-59.1	141.3	0	0	112.2	L7 S8 K14 H15	L7-E11 HydrophobicContact CB-CB 4.19Å; L7-E11 HydrophobicContact CD2-CB 4.06Å; S8-E11 PolarHBondContact O-N 3Å; S8-E11 VanDerWaalsContact O-N 3.09Å; S8-E11 PolarHBondContact OG-N 3.46Å; E11-K14 PolarHBondContact O-N 3.17Å; E11-H15 WeakPolarHBondContact O-CB 3.27Å; E11-H15 PolarHBondContact O-N 3.14Å; E11-H15 PolarHBondContact O-ND1 2.95Å
12	L	88.3	Confident	84.8	Confident	3 Å²	3	76.6 Å²	76.6	2%	0.016	40%	0.404	C	S	.	.	H	α-helix	trans	-61.2	-45	173.7	-179	60.9	0	0	0	110.9	L7 S8 H15 L16 I26 R31 E35 L38	L7-L12 HydrophobicContact CB-CB 4.4Å; S8-L12 WeakPolarHBondContact O-CB 3.47Å; S8-L12 PolarHBondContact O-N 3.33Å; L12-H15 PolarHBondContact O-N 3.09Å; L12-L16 HydrophobicContact CD1-CD1 4.49Å; L12-L16 HydrophobicContact CG-CD1 4.38Å; L12-L16 WeakPolarHBondContact O-CG 3.4Å; L12-L16 PolarHBondContact O-N 3.21Å; L12-L16 VanDerWaalsContact O-N 3.09Å; L12-I26 HydrophobicContact CB-CD1 4.36Å; L12-I26 HydrophobicContact CD2-CD1 4.1Å; L12-I26 HydrophobicContact CG-CD1 4.18Å; L12-R31 HydrophobicContact CD2-CG 4Å; L12-E35 HydrophobicContact CD1-CG 4.36Å; L12-E35 HydrophobicContact CD2-CG 4.03Å; L12-L38 HydrophobicContact CD1-CB 4.14Å; L12-L38 HydrophobicContact CD1-CD2 3.65Å
13	H	88.2	Confident	85.6	Confident	61 Å²	61	73.7 Å²	73.7	28%	0.282	39%	0.386	S	S	.	.	H	α-helix	trans	-59.6	-50.4	176.6	-174.3	-76.6	0	0	0	111.7	D9 Y10 H15 L16 M17 P23 I26	D9-H13 VanDerWaalsContact O-CB 3.31Å; D9-H13 WeakPolarHBondContact O-CB 3.36Å; D9-H13 PolarHBondContact O-N 2.98Å; Y10-H13 WeakPolarHBondContact O-CB 3.48Å; Y10-H13 PolarHBondContact O-N 3.38Å; H13-H15 VanDerWaalsContact C-N 3.34Å; H13-H15 PolarHBondContact O-N 3.46Å; H13-L16 PolarHBondContact O-N 3.09Å; H13-M17 PolarHBondContact CE1-SD 3.46Å; H13-M17 PolarHBondContact O-N 2.91Å; H13-P23 HydrophobicContact CB-CG 4.41Å; H13-P23 VanDerWaalsContact CD2-CG 3.41Å; H13-P23 WeakPolarHBondContact CD2-CG 3.37Å; H13-P23 PolarHBondContact NE2-O 2.76Å; H13-I26 HydrophobicContact CB-CD1 4.03Å
14	K	88.8	Confident	85.9	Confident	89 Å²	89	71 Å²	71	39%	0.387	38%	0.379	S	S	.	.	H	α-helix	trans	-60.8	-40.4	179.6	-171.7	177.8	-177.5	-179.5	0	112.6	Y10 E11 M17 K18	Y10-K14 WeakPolarHBondContact O-CB 3.46Å; Y10-K14 PolarHBondContact O-N 3.44Å; E11-K14 PolarHBondContact O-N 3.17Å; K14-M17 PolarHBondContact O-N 3.37Å; K14-K18 WeakPolarHBondContact O-CG 3.41Å; K14-K18 PolarHBondContact O-N 3.21Å
15	H	87.4	Confident	86.2	Confident	42 Å²	42	75 Å²	75	19%	0.194	41%	0.406	C	S	.	.	H	α-helix	trans	-65.7	-42.3	176.9	-85.9	81.2	0	0	0	112.3	E11 L12 H13 K18 L19 L38	E11-H15 WeakPolarHBondContact O-CB 3.27Å; E11-H15 PolarHBondContact O-N 3.14Å; E11-H15 PolarHBondContact O-ND1 2.95Å; L12-H15 PolarHBondContact O-N 3.09Å; H13-H15 VanDerWaalsContact C-N 3.34Å; H13-H15 PolarHBondContact O-N 3.46Å; H15-K18 PolarHBondContact O-N 3.27Å; H15-L19 WeakPolarHBondContact O-CD1 3.32Å; H15-L19 WeakPolarHBondContact O-CG 3.4Å; H15-L19 PolarHBondContact O-N 3.44Å; H15-L38 HydrophobicContact CB-CD1 3.78Å; H15-L38 HydrophobicContact CB-CD2 3.6Å; H15-L38 HydrophobicContact CB-CG 4.41Å
16	L	87	Confident	86.6	Confident	0 Å²	0	68.7 Å²	68.7	0%	0	38%	0.38	C	S	.	.	H	α-helix	trans	-62.6	-43.6	175.1	-72.9	169.9	0	0	0	111.6	L12 H13 K18 L19 G20 F21 P23 Y34 K37 L38 L41	L12-L16 HydrophobicContact CD1-CD1 4.49Å; L12-L16 HydrophobicContact CG-CD1 4.38Å; L12-L16 WeakPolarHBondContact O-CG 3.4Å; L12-L16 PolarHBondContact O-N 3.21Å; L12-L16 VanDerWaalsContact O-N 3.09Å; H13-L16 PolarHBondContact O-N 3.09Å; L16-K18 PolarHBondContact O-N 3.1Å; L16-L19 PolarHBondContact O-N 3.14Å; L16-L19 VanDerWaalsContact O-N 3.1Å; L16-G20 PolarHBondContact O-N 3.22Å; L16-F21 CarbonylContact C-O 3.14Å; L16-F21 HydrophobicContact CB-CB 4.35Å; L16-F21 HydrophobicContact CB-CD1 4.12Å; L16-F21 HydrophobicContact CD1-CD1 4.36Å; L16-F21 HydrophobicContact CD2-CD1 4.18Å; L16-F21 HydrophobicContact CG-CD1 4.47Å; L16-F21 WeakPolarHBondContact O-CB 3.41Å; L16-F21 PolarHBondContact O-N 2.95Å; L16-F21 VanDerWaalsContact O-O 3.06Å; L16-P23 HydrophobicContact CB-CG 3.93Å; L16-P23 HydrophobicContact CD1-CB 3.97Å; L16-P23 HydrophobicContact CD1-CG 4Å; L16-Y34 HydrophobicContact CD1-CD1 3.64Å; L16-Y34 HydrophobicContact CD1-CG 3.85Å; L16-K37 HydrophobicContact CD2-CB 4.19Å; L16-L38 HydrophobicContact CD2-CB 4.16Å; L16-L41 HydrophobicContact CD2-CD1 3.97Å
17	M	87.4	Confident	86.8	Confident	99 Å²	99	67.9 Å²	67.9	49%	0.488	37%	0.368	S	S	.	.	H	α-helix	trans	-61.2	-41.7	175.9	-73.2	-156.1	79.9	0	0	112.9	H13 K14 L19 G20 F21	H13-M17 PolarHBondContact CE1-SD 3.46Å; H13-M17 PolarHBondContact O-N 2.91Å; K14-M17 PolarHBondContact O-N 3.37Å; M17-L19 PolarHBondContact O-N 2.99Å; M17-G20 PolarHBondContact O-N 2.96Å; M17-F21 WeakPolarHBondContact CA-O 3.43Å; M17-F21 PolarHBondContact N-O 3.22Å
18	K	86.6	Confident	86.7	Confident	152 Å²	152	71.1 Å²	71.1	66%	0.661	39%	0.391	S	S	*	.	H	α-helix	trans	-59	-29.2	175.2	-79.4	178.3	175.5	-177	0	113	K14 H15 L16 G20	K14-K18 WeakPolarHBondContact O-CG 3.41Å; K14-K18 PolarHBondContact O-N 3.21Å; H15-K18 PolarHBondContact O-N 3.27Å; L16-K18 PolarHBondContact O-N 3.1Å; K18-G20 VanDerWaalsContact C-N 3.27Å
19	L	84	Confident	86.3	Confident	73 Å²	73	72.7 Å²	72.7	38%	0.382	40%	0.402	S	S	.	.	T	Hydrogen-bonded Turn	trans	-88.5	5.7	178.7	-62.7	163.2	0	0	0	112.4	H15 L16 M17 L38 L41	H15-L19 WeakPolarHBondContact O-CD1 3.32Å; H15-L19 WeakPolarHBondContact O-CG 3.4Å; H15-L19 PolarHBondContact O-N 3.44Å; L16-L19 PolarHBondContact O-N 3.14Å; L16-L19 VanDerWaalsContact O-N 3.1Å; M17-L19 PolarHBondContact O-N 2.99Å; L19-L38 HydrophobicContact CD1-CD1 3.34Å; L19-L41 HydrophobicContact CB-CD1 3.98Å; L19-L41 HydrophobicContact CD1-CB 3.71Å; L19-L41 HydrophobicContact CD1-CD1 3.91Å; L19-L41 HydrophobicContact CD1-CG 4.45Å
20	G	84.8	Confident	86.2	Confident	71 Å²	71	71.9 Å²	71.9	73%	0.732	40%	0.4	S	S	*	.	T	Hydrogen-bonded Turn	trans	82	13.7	-179.9	0	0	0	0	0	114.2	L16 M17 K18	L16-G20 PolarHBondContact O-N 3.22Å; M17-G20 PolarHBondContact O-N 2.96Å; K18-G20 VanDerWaalsContact C-N 3.27Å
21	F	83.1	Confident	86.2	Confident	72 Å²	72	68.6 Å²	68.6	32%	0.316	39%	0.386	S	S	.	.			trans	-101.4	128.7	175.1	-171.7	-92.1	0	0	0	109.8	L16 M17 P23 Y34 L41	L16-F21 CarbonylContact C-O 3.14Å; L16-F21 HydrophobicContact CB-CB 4.35Å; L16-F21 HydrophobicContact CB-CD1 4.12Å; L16-F21 HydrophobicContact CD1-CD1 4.36Å; L16-F21 HydrophobicContact CD2-CD1 4.18Å; L16-F21 HydrophobicContact CG-CD1 4.47Å; L16-F21 WeakPolarHBondContact O-CB 3.41Å; L16-F21 PolarHBondContact O-N 2.95Å; L16-F21 VanDerWaalsContact O-O 3.06Å; M17-F21 WeakPolarHBondContact CA-O 3.43Å; M17-F21 PolarHBondContact N-O 3.22Å; F21-P23 HydrophobicContact CD1-CB 4.18Å; F21-P23 HydrophobicContact CE1-CB 4.02Å; F21-P23 WeakPolarHBondContact O-CD 3.5Å; F21-Y34 HydrophobicContact CE1-CD1 4.09Å; F21-Y34 AromaticContact CE1-CE1 3.72Å; F21-Y34 HydrophobicContact CE1-CE1 3.72Å; F21-Y34 HydrophobicContact CZ-CE1 4.33Å; F21-L41 HydrophobicContact CB-CD1 4.48Å
22	T	85.4	Confident	86.1	Confident	113 Å²	113	73.1 Å²	73.1	69%	0.693	41%	0.405	S	S	*	.			trans	-99.9	91.3	178.1	-45.3	0	0	0	0	109.6
23	P	83.9	Confident	86	Confident	8 Å²	8	76.8 Å²	76.8	5%	0.052	43%	0.427	C	S	.	.			trans	-69.7	146.4	178.1	28.5	-33.6	0	0	0	111.3	H13 L16 F21 Y34	H13-P23 HydrophobicContact CB-CG 4.41Å; H13-P23 VanDerWaalsContact CD2-CG 3.41Å; H13-P23 WeakPolarHBondContact CD2-CG 3.37Å; H13-P23 PolarHBondContact NE2-O 2.76Å; L16-P23 HydrophobicContact CB-CG 3.93Å; L16-P23 HydrophobicContact CD1-CB 3.97Å; L16-P23 HydrophobicContact CD1-CG 4Å; F21-P23 HydrophobicContact CD1-CB 4.18Å; F21-P23 HydrophobicContact CE1-CB 4.02Å; F21-P23 WeakPolarHBondContact O-CD 3.5Å; P23-Y34 HydrophobicContact CB-CD1 4.04Å; P23-Y34 HydrophobicContact CB-CE1 3.64Å; P23-Y34 HydrophobicContact CB-CE2 4.33Å
24	G	85.9	Confident	86	Confident	33 Å²	33	75.4 Å²	75.4	34%	0.34	42%	0.42	S	S	.	.			trans	-83	-157.5	170.7	0	0	0	0	0	111.5	I26 Y34	G24-I26 PolarHBondContact O-N 3.05Å; G24-Y34 PolarHBondContact N-OH 3.43Å
25	P	86.6	Confident	86	Confident	103 Å²	103	72.7 Å²	72.7	67%	0.669	41%	0.409	S	S	*	.			trans	-58.7	124.6	179.7	22.5	-31.4	0	0	0	111.3	L27 T30	P25-L27 PolarHBondContact O-N 2.86Å; P25-T30 PolarHBondContact O-OG1 3.25Å
26	I	88.3	Confident	85.9	Confident	34 Å²	34	77.4 Å²	77.4	17%	0.174	43%	0.429	C	S	.	.			trans	-81.2	103.2	176	-55.1	-146.8	0	0	0	107.9	D9 L12 H13 G24 R31 Y34	D9-I26 HydrophobicContact CB-CB 4.28Å; D9-I26 HydrophobicContact CB-CG2 4.06Å; D9-I26 VanDerWaalsContact OD1-CG2 3.27Å; D9-I26 WeakPolarHBondContact OD1-CG2 3.31Å; L12-I26 HydrophobicContact CB-CD1 4.36Å; L12-I26 HydrophobicContact CD2-CD1 4.1Å; L12-I26 HydrophobicContact CG-CD1 4.18Å; H13-I26 HydrophobicContact CB-CD1 4.03Å; G24-I26 PolarHBondContact O-N 3.05Å; I26-R31 HydrophobicContact CG2-CB 4.1Å; I26-R31 HydrophobicContact CG2-CG 4.33Å; I26-Y34 HydrophobicContact CD1-CD2 3.94Å; I26-Y34 HydrophobicContact CD1-CE2 4.42Å; I26-Y34 HydrophobicContact CG1-CD2 4Å; I26-Y34 HydrophobicContact CG1-CE2 4.05Å; I26-Y34 HydrophobicContact CG2-CD2 4.4Å
27	L	87.7	Confident	85.8	Confident	88 Å²	88	79.2 Å²	79.2	46%	0.461	44%	0.436	S	S	.	.			trans	-104.8	157.3	176	-72.6	155	0	0	0	108.6	P25 S29 T30 R31	P25-L27 PolarHBondContact O-N 2.86Å; L27-S29 PolarHBondContact O-N 3.31Å; L27-S29 VanDerWaalsContact O-N 3.1Å; L27-T30 PolarHBondContact N-OG1 3.19Å; L27-T30 CarbonylContact O-C 3.56Å; L27-T30 PolarHBondContact O-N 2.87Å; L27-T30 PolarHBondContact O-OG1 2.97Å; L27-R31 WeakPolarHBondContact O-CB 2.97Å; L27-R31 PolarHBondContact O-N 3.4Å
28	P	82.6	Confident	85.7	Confident	105 Å²	105	74.5 Å²	74.5	68%	0.682	41%	0.413	S	S	*	.	H	α-helix	trans	-53.6	-35.7	177.5	-26	33.9	0	0	0	113.4
29	S	80.1	Confident	85.6	Confident	95 Å²	95	70.6 Å²	70.6	66%	0.664	40%	0.402	S	S	*	.	H	α-helix	trans	-71.9	-33	176.9	47.3	0	0	0	0	113.6	L27	L27-S29 PolarHBondContact O-N 3.31Å; L27-S29 VanDerWaalsContact O-N 3.1Å
30	T	86.8	Confident	85.5	Confident	42 Å²	42	69.6 Å²	69.6	26%	0.258	40%	0.395	S	S	.	.	H	α-helix	trans	-93	-21.5	179.6	58.2	0	0	0	0	113.2	P25 L27 K32 T33 Y34	P25-T30 PolarHBondContact O-OG1 3.25Å; L27-T30 PolarHBondContact N-OG1 3.19Å; L27-T30 CarbonylContact O-C 3.56Å; L27-T30 PolarHBondContact O-N 2.87Å; L27-T30 PolarHBondContact O-OG1 2.97Å; T30-K32 VanDerWaalsContact C-N 3.31Å; T30-K32 PolarHBondContact O-N 2.98Å; T30-T33 WeakPolarHBondContact O-CA 3.18Å; T30-T33 VanDerWaalsContact O-CB 3.28Å; T30-T33 WeakPolarHBondContact O-CB 3.42Å; T30-T33 PolarHBondContact O-N 3.33Å; T30-Y34 WeakPolarHBondContact O-CD2 3.37Å; T30-Y34 PolarHBondContact O-N 3.37Å
31	R	88.2	Confident	85.2	Confident	88 Å²	88	67.7 Å²	67.7	33%	0.332	37%	0.368	S	S	.	.	H	α-helix	trans	-52.8	-47.4	178.8	-175.7	-173.4	-70.6	161	-1.7	111.5	D9 L12 I26 L27 T33 Y34 E35	D9-R31 IonicContact OD1-CZ 3.78Å; D9-R31 IonicContact OD1-NE 2.76Å; D9-R31 PolarHBondContact OD1-NE 3.2Å; D9-R31 IonicContact OD1-NH2 2.72Å; D9-R31 PolarHBondContact OD1-NH2 3.38Å; D9-R31 IonicContact OD2-CZ 2.68Å; D9-R31 IonicContact OD2-NH2 3.07Å; D9-R31 PolarHBondContact OD2-NH2 2.68Å; L12-R31 HydrophobicContact CD2-CG 4Å; I26-R31 HydrophobicContact CG2-CB 4.1Å; I26-R31 HydrophobicContact CG2-CG 4.33Å; L27-R31 WeakPolarHBondContact O-CB 2.97Å; L27-R31 PolarHBondContact O-N 3.4Å; R31-T33 PolarHBondContact O-N 3.13Å; R31-Y34 WeakPolarHBondContact O-CB 3.49Å; R31-Y34 PolarHBondContact O-N 2.98Å; R31-E35 HydrophobicContact CG-CG 4.42Å; R31-E35 WeakPolarHBondContact CG-OE1 3.28Å; R31-E35 WeakPolarHBondContact O-CG 3.47Å; R31-E35 PolarHBondContact O-N 3.5Å
32	K	87	Confident	85.1	Confident	165 Å²	165	68.5 Å²	68.5	72%	0.717	38%	0.375	S	S	*	.	H	α-helix	trans	-60.1	-34.2	178.2	-165.7	173	-174.7	176.5	0	112.9	T30 K36	T30-K32 VanDerWaalsContact C-N 3.31Å; T30-K32 PolarHBondContact O-N 2.98Å; K32-K36 WeakPolarHBondContact O-CB 3.45Å; K32-K36 PolarHBondContact O-N 2.75Å
33	T	86.7	Confident	84.7	Confident	80 Å²	80	67.2 Å²	67.2	49%	0.491	38%	0.376	S	S	.	.	H	α-helix	trans	-70	-43.5	175.1	-60	0	0	0	0	110.7	T30 R31 K36 K37	T30-T33 WeakPolarHBondContact O-CA 3.18Å; T30-T33 VanDerWaalsContact O-CB 3.28Å; T30-T33 WeakPolarHBondContact O-CB 3.42Å; T30-T33 PolarHBondContact O-N 3.33Å; R31-T33 PolarHBondContact O-N 3.13Å; T33-K36 PolarHBondContact O-N 3.28Å; T33-K37 HydrophobicContact CG2-CG 4.5Å; T33-K37 WeakPolarHBondContact O-CB 3.26Å; T33-K37 WeakPolarHBondContact O-CG 3.47Å; T33-K37 PolarHBondContact O-N 2.94Å
34	Y	88.8	Confident	83.9	Confident	32 Å²	32	70.1 Å²	70.1	13%	0.125	40%	0.397	C	S	.	.	H	α-helix	trans	-66.3	-40.7	178.1	-72.2	-43.1	0	0	0	113.2	L16 F21 P23 G24 I26 T30 R31 K37 L38	L16-Y34 HydrophobicContact CD1-CD1 3.64Å; L16-Y34 HydrophobicContact CD1-CG 3.85Å; F21-Y34 HydrophobicContact CE1-CD1 4.09Å; F21-Y34 AromaticContact CE1-CE1 3.72Å; F21-Y34 HydrophobicContact CE1-CE1 3.72Å; F21-Y34 HydrophobicContact CZ-CE1 4.33Å; P23-Y34 HydrophobicContact CB-CD1 4.04Å; P23-Y34 HydrophobicContact CB-CE1 3.64Å; P23-Y34 HydrophobicContact CB-CE2 4.33Å; G24-Y34 PolarHBondContact N-OH 3.43Å; I26-Y34 HydrophobicContact CD1-CD2 3.94Å; I26-Y34 HydrophobicContact CD1-CE2 4.42Å; I26-Y34 HydrophobicContact CG1-CD2 4Å; I26-Y34 HydrophobicContact CG1-CE2 4.05Å; I26-Y34 HydrophobicContact CG2-CD2 4.4Å; T30-Y34 WeakPolarHBondContact O-CD2 3.37Å; T30-Y34 PolarHBondContact O-N 3.37Å; R31-Y34 WeakPolarHBondContact O-CB 3.49Å; R31-Y34 PolarHBondContact O-N 2.98Å; Y34-K37 WeakPolarHBondContact O-CB 3.26Å; Y34-K37 PolarHBondContact O-N 3.49Å; Y34-L38 WeakPolarHBondContact O-CB 3.4Å; Y34-L38 PolarHBondContact O-N 3.42Å
35	E	87.6	Confident	82.5	Confident	32 Å²	32	74 Å²	74	15%	0.15	42%	0.415	C	S	.	.	H	α-helix	trans	-59.1	-48.9	172.5	-72.1	171.4	-165.7	0	0	111.3	V4 L12 R31 K37 L38 V39	V4-E35 HydrophobicContact CB-CB 4.36Å; V4-E35 HydrophobicContact CB-CG 4.46Å; L12-E35 HydrophobicContact CD1-CG 4.36Å; L12-E35 HydrophobicContact CD2-CG 4.03Å; R31-E35 HydrophobicContact CG-CG 4.42Å; R31-E35 WeakPolarHBondContact CG-OE1 3.28Å; R31-E35 WeakPolarHBondContact O-CG 3.47Å; R31-E35 PolarHBondContact O-N 3.5Å; E35-K37 VanDerWaalsContact C-N 3.29Å; E35-K37 PolarHBondContact O-N 3.27Å; E35-L38 PolarHBondContact O-N 3.17Å; E35-L38 VanDerWaalsContact O-N 3.13Å; E35-V39 WeakPolarHBondContact O-CG2 3.24Å; E35-V39 PolarHBondContact O-N 2.95Å
36	K	85.4	Confident	80.8	Confident	141 Å²	141	74.4 Å²	74.4	61%	0.613	42%	0.419	S	S	*	.	H	α-helix	trans	-61.5	-40.2	178.5	-169	173.5	-178.5	177	0	111.4	K32 T33 V39 Q40	K32-K36 WeakPolarHBondContact O-CB 3.45Å; K32-K36 PolarHBondContact O-N 2.75Å; T33-K36 PolarHBondContact O-N 3.28Å; K36-V39 PolarHBondContact O-N 3.42Å; K36-Q40 WeakPolarHBondContact O-CB 3.44Å; K36-Q40 VanDerWaalsContact O-CG 3.24Å; K36-Q40 WeakPolarHBondContact O-CG 3.13Å; K36-Q40 PolarHBondContact O-N 3.2Å
37	K	84.3	Confident	79	Confident	37 Å²	37	77.4 Å²	77.4	16%	0.161	43%	0.428	C	S	.	.	H	α-helix	trans	-61.2	-43.9	173.8	-73.1	-82.7	-178.3	171.4	0	111.8	L16 T33 Y34 E35 Q40 L41 W47	L16-K37 HydrophobicContact CD2-CB 4.19Å; T33-K37 HydrophobicContact CG2-CG 4.5Å; T33-K37 WeakPolarHBondContact O-CB 3.26Å; T33-K37 WeakPolarHBondContact O-CG 3.47Å; T33-K37 PolarHBondContact O-N 2.94Å; Y34-K37 WeakPolarHBondContact O-CB 3.26Å; Y34-K37 PolarHBondContact O-N 3.49Å; E35-K37 VanDerWaalsContact C-N 3.29Å; E35-K37 PolarHBondContact O-N 3.27Å; K37-Q40 PolarHBondContact O-N 2.95Å; K37-L41 WeakPolarHBondContact O-CB 3.44Å; K37-L41 VanDerWaalsContact O-CG 3.26Å; K37-L41 WeakPolarHBondContact O-CG 3.46Å; K37-L41 PolarHBondContact O-N 3.1Å; K37-W47 VanDerWaalsContact NZ-CD1 3.29Å
38	L	85.4	Confident	77.2	Confident	0 Å²	0	81.9 Å²	81.9	0%	0	44%	0.443	C	S	.	.	H	α-helix	trans	-63.9	-46.2	179.3	-179	53.5	0	0	0	111.3	V4 L7 L12 H15 L16 L19 Y34 E35 Q40 L41 L42	V4-L38 HydrophobicContact CG1-CB 3.89Å; V4-L38 HydrophobicContact CG1-CD2 3.67Å; V4-L38 HydrophobicContact CG1-CG 3.76Å; L7-L38 HydrophobicContact CD1-CD2 3.6Å; L12-L38 HydrophobicContact CD1-CB 4.14Å; L12-L38 HydrophobicContact CD1-CD2 3.65Å; H15-L38 HydrophobicContact CB-CD1 3.78Å; H15-L38 HydrophobicContact CB-CD2 3.6Å; H15-L38 HydrophobicContact CB-CG 4.41Å; L16-L38 HydrophobicContact CD2-CB 4.16Å; L19-L38 HydrophobicContact CD1-CD1 3.34Å; Y34-L38 WeakPolarHBondContact O-CB 3.4Å; Y34-L38 PolarHBondContact O-N 3.42Å; E35-L38 PolarHBondContact O-N 3.17Å; E35-L38 VanDerWaalsContact O-N 3.13Å; L38-Q40 VanDerWaalsContact C-N 3.29Å; L38-Q40 PolarHBondContact O-N 3.02Å; L38-L41 PolarHBondContact O-N 2.96Å; L38-L42 HydrophobicContact CD1-CD1 4.02Å; L38-L42 HydrophobicContact CD1-CG 4.06Å; L38-L42 HydrophobicContact CG-CD1 4.08Å; L38-L42 WeakPolarHBondContact O-CB 3.47Å; L38-L42 VanDerWaalsContact O-CG 3.26Å; L38-L42 WeakPolarHBondContact O-CG 3.26Å; L38-L42 PolarHBondContact O-N 3.3Å
39	V	85.5	Confident	75.8	Confident	71 Å²	71	81.5 Å²	81.5	43%	0.43	44%	0.441	S	S	.	.	H	α-helix	trans	-58.1	-43.3	173.9	178	0	0	0	0	111.3	V4 E35 K36 L42 A43	V4-V39 HydrophobicContact CB-CG2 4.17Å; V4-V39 HydrophobicContact CG1-CG2 3.86Å; V4-V39 HydrophobicContact CG2-CG2 3.34Å; E35-V39 WeakPolarHBondContact O-CG2 3.24Å; E35-V39 PolarHBondContact O-N 2.95Å; K36-V39 PolarHBondContact O-N 3.42Å; V39-L42 PolarHBondContact O-N 2.88Å; V39-A43 VanDerWaalsContact O-CB 3.26Å; V39-A43 WeakPolarHBondContact O-CB 3.42Å; V39-A43 PolarHBondContact O-N 3Å
40	Q	80.7	Confident	74.4	Confident	52 Å²	52	81 Å²	81	24%	0.243	44%	0.436	C	S	.	.	H	α-helix	trans	-64.9	-44.3	179.8	-76.1	178	-48.7	0	0	112.6	K36 K37 L38 L42 A43 S44 W47	K36-Q40 WeakPolarHBondContact O-CB 3.44Å; K36-Q40 VanDerWaalsContact O-CG 3.24Å; K36-Q40 WeakPolarHBondContact O-CG 3.13Å; K36-Q40 PolarHBondContact O-N 3.2Å; K37-Q40 PolarHBondContact O-N 2.95Å; L38-Q40 VanDerWaalsContact C-N 3.29Å; L38-Q40 PolarHBondContact O-N 3.02Å; Q40-L42 VanDerWaalsContact C-N 3.33Å; Q40-L42 PolarHBondContact O-N 3.27Å; Q40-A43 PolarHBondContact O-N 2.94Å; Q40-S44 PolarHBondContact O-N 3.21Å; Q40-W47 HydrophobicContact CB-CE3 4.08Å; Q40-W47 HydrophobicContact CB-CZ3 4.37Å; Q40-W47 VanDerWaalsContact CD-CH2 3.5Å; Q40-W47 VanDerWaalsContact CD-CZ3 3.42Å; Q40-W47 HydrophobicContact CG-CE3 4.37Å; Q40-W47 HydrophobicContact CG-CZ3 4.17Å
41	L	80.3	Confident	72.4	Confident	30 Å²	30	84.6 Å²	84.6	16%	0.157	46%	0.457	C	S	.	.	H	α-helix	trans	-65.7	-36.1	178	-70.9	166.9	0	0	0	112.2	L16 L19 F21 K37 L38 W47	L16-L41 HydrophobicContact CD2-CD1 3.97Å; L19-L41 HydrophobicContact CB-CD1 3.98Å; L19-L41 HydrophobicContact CD1-CB 3.71Å; L19-L41 HydrophobicContact CD1-CD1 3.91Å; L19-L41 HydrophobicContact CD1-CG 4.45Å; F21-L41 HydrophobicContact CB-CD1 4.48Å; K37-L41 WeakPolarHBondContact O-CB 3.44Å; K37-L41 VanDerWaalsContact O-CG 3.26Å; K37-L41 WeakPolarHBondContact O-CG 3.46Å; K37-L41 PolarHBondContact O-N 3.1Å; L38-L41 PolarHBondContact O-N 2.96Å; L41-W47 HydrophobicContact CD2-CB 4.1Å
42	L	79.1	Confident	70.5	Confident	90 Å²	90	88.6 Å²	88.6	47%	0.471	48%	0.482	S	S	.	.	H	α-helix	trans	-71.7	-32.6	175.1	-69	173.3	0	0	0	112.6	V2 L38 V39 Q40	V2-L42 HydrophobicContact CB-CD1 4.27Å; L38-L42 HydrophobicContact CD1-CD1 4.02Å; L38-L42 HydrophobicContact CD1-CG 4.06Å; L38-L42 HydrophobicContact CG-CD1 4.08Å; L38-L42 WeakPolarHBondContact O-CB 3.47Å; L38-L42 VanDerWaalsContact O-CG 3.26Å; L38-L42 WeakPolarHBondContact O-CG 3.26Å; L38-L42 PolarHBondContact O-N 3.3Å; V39-L42 PolarHBondContact O-N 2.88Å; Q40-L42 VanDerWaalsContact C-N 3.33Å; Q40-L42 PolarHBondContact O-N 3.27Å
43	A	77.9	Confident	68.6	Low	85 Å²	85	89.6 Å²	89.6	70%	0.702	49%	0.486	S	S	*	.	H	α-helix	trans	-81.9	-31.6	-179.5	0	0	0	0	0	113.5	V39 Q40	V39-A43 VanDerWaalsContact O-CB 3.26Å; V39-A43 WeakPolarHBondContact O-CB 3.42Å; V39-A43 PolarHBondContact O-N 3Å; Q40-A43 PolarHBondContact O-N 2.94Å
44	S	66.3	Low	66.9	Low	70 Å²	70	95.6 Å²	95.6	49%	0.49	50%	0.5	S	S	.	.	S	Bend	trans	-158	115.6	178	177.8	0	0	0	0	111.5	Q40	Q40-S44 PolarHBondContact O-N 3.21Å
45	P	56.7	Low	65.2	Low	113 Å²	113	100 Å²	100	73%	0.734	53%	0.532	S	S	*	.	S	Bend	trans	-83.2	122.8	160.1	30.8	-24.1	0	0	0	107.4
46	P	51.9	Low	63.4	Low	113 Å²	113	104.4 Å²	104.4	73%	0.734	56%	0.561	S	S	*	*			cis	-129	134.6	29.2	35.7	-16.7	0	0	0	114.4	K48	P46-K48 PolarHBondContact O-N 3.2Å
47	W	50.8	Low	62	Low	96 Å²	96	107.1 Å²	107.1	36%	0.364	57%	0.568	S	S	.	*			trans	-83.2	100	178.7	-172.7	-91.3	0	0	0	112.3	K37 Q40 L41 P50	K37-W47 VanDerWaalsContact NZ-CD1 3.29Å; Q40-W47 HydrophobicContact CB-CE3 4.08Å; Q40-W47 HydrophobicContact CB-CZ3 4.37Å; Q40-W47 VanDerWaalsContact CD-CH2 3.5Å; Q40-W47 VanDerWaalsContact CD-CZ3 3.42Å; Q40-W47 HydrophobicContact CG-CE3 4.37Å; Q40-W47 HydrophobicContact CG-CZ3 4.17Å; L41-W47 HydrophobicContact CD2-CB 4.1Å; W47-P50 HydrophobicContact CZ2-CB 4.16Å; W47-P50 HydrophobicContact CZ2-CG 3.73Å; W47-P50 VanDerWaalsContact NE1-CD 3.34Å
48	K	49.7	Very low	60.7	Low	183 Å²	183	112 Å²	112	80%	0.796	60%	0.603	S	S	*	*			trans	-65.1	132.3	156.4	-68.8	-174	179.8	-179.1	0	107.6	P46	P46-K48 PolarHBondContact O-N 3.2Å
49	P	52.2	Low	59	Low	97 Å²	97	119.9 Å²	119.9	63%	0.63	64%	0.639	S	S	*	*			trans	-53.7	136.8	177.2	-12.2	22.8	0	0	0	108.7	V51	P49-V51 VanDerWaalsContact C-N 3.27Å; P49-V51 PolarHBondContact O-N 2.9Å
50	P	50.5	Low	57.2	Low	85 Å²	85	119 Å²	119	55%	0.552	64%	0.644	S	S	*	*			trans	-67.2	105.1	169.4	32.8	-27.8	0	0	0	103.1	W47 M52	W47-P50 HydrophobicContact CZ2-CB 4.16Å; W47-P50 HydrophobicContact CZ2-CG 3.73Å; W47-P50 VanDerWaalsContact NE1-CD 3.34Å; P50-M52 PolarHBondContact O-N 2.83Å
51	V	45.1	Very low	56.1	Low	117 Å²	117	121.8 Å²	121.8	71%	0.709	67%	0.67	S	S	*	*			trans	-49.9	114.8	163.7	-169.2	0	0	0	0	103.1	P49 K53	P49-V51 VanDerWaalsContact C-N 3.27Å; P49-V51 PolarHBondContact O-N 2.9Å; V51-K53 PolarHBondContact O-N 2.83Å
52	M	48.3	Very low	55	Low	172 Å²	172	129.6 Å²	129.6	85%	0.847	71%	0.706	S	S	*	*			trans	-61.5	88.2	178.4	-163.7	165.1	97.2	0	0	104.9	P50 R54	P50-M52 PolarHBondContact O-N 2.83Å; M52-R54 PolarHBondContact O-N 2.65Å
53	K	47.5	Very low	53.9	Low	186 Å²	186	132.4 Å²	132.4	81%	0.809	72%	0.721	S	S	*	*			trans	-64.1	98.7	169	-58.6	-100.6	-178.6	-173.3	0	101.2	V51	V51-K53 PolarHBondContact O-N 2.83Å
54	R	51.9	Low	52.9	Low	206 Å²	206	133.7 Å²	133.7	78%	0.777	73%	0.725	S	S	*	*			trans	-38.1	136.8	166.3	-97.8	179.9	161.5	173.3	-4.8	106.6	M52 T56	M52-R54 PolarHBondContact O-N 2.65Å; R54-T56 PolarHBondContact O-N 2.71Å
55	P	53	Low	52.9	Low	123 Å²	123	137 Å²	137	80%	0.799	74%	0.737	S	S	*	*			trans	-62.6	89.1	161.9	1.2	11.6	0	0	0	105.9	R57	P55-R57 VanDerWaalsContact C-N 3.27Å; P55-R57 PolarHBondContact O-N 2.99Å
56	T	48.9	Very low	53.6	Low	125 Å²	125	137.7 Å²	137.7	77%	0.767	74%	0.735	S	S	*	*			trans	-64.4	103.9	160.3	-76.7	0	0	0	0	103.7	R54 P58	R54-T56 PolarHBondContact O-N 2.71Å; T56-P58 WeakPolarHBondContact O-CD 3.5Å
57	R	55.8	Low	54.1	Low	198 Å²	198	137.5 Å²	137.5	75%	0.747	74%	0.736	S	S	*	*			trans	-47.6	124.4	171.7	-50.6	175.7	99.2	-165.3	4.9	106.9	P55 H59	P55-R57 VanDerWaalsContact C-N 3.27Å; P55-R57 PolarHBondContact O-N 2.99Å; R57-H59 VanDerWaalsContact C-N 3.31Å; R57-H59 HydrophobicContact CB-CB 4.34Å; R57-H59 PolarHBondContact O-N 3.06Å
58	P	56.8	Low	54.9	Low	139 Å²	139	141.6 Å²	141.6	90%	0.903	76%	0.759	S	S	*	*			trans	-71.5	99.7	159.6	28.3	-26.3	0	0	0	105.7	T56	T56-P58 WeakPolarHBondContact O-CD 3.5Å
59	H	50.1	Low	55.2	Low	166 Å²	166	143.2 Å²	143.2	77%	0.769	78%	0.784	S	S	*	*			trans	-140	123.3	175.5	-170.8	53.2	0	0	0	106.2	R57	R57-H59 VanDerWaalsContact C-N 3.31Å; R57-H59 HydrophobicContact CB-CB 4.34Å; R57-H59 PolarHBondContact O-N 3.06Å
60	G	48.7	Very low	55.4	Low	52 Å²	52	145.6 Å²	145.6	54%	0.536	79%	0.792	S	S	.	*			cis	-130.5	157.3	-7.6	0	0	0	0	0	108.6
61	S	56	Low	55.6	Low	112 Å²	112	148.7 Å²	148.7	78%	0.783	81%	0.805	S	S	*	*				55.2	106.5	101.6	60.1	0	0	0	0	112.7	D63	S61-D63 PolarHBondContact O-N 3.47Å
62	E	57.6	Low	56.2	Low	193 Å²	193	150.5 Å²	150.5	90%	0.902	81%	0.81	S	S	*	*			trans	-33.8	125.9	162.9	-66.6	149.7	90.9	0	0	112
63	D	56.1	Low	56.7	Low	150 Å²	150	149.2 Å²	149.2	80%	0.802	81%	0.808	S	S	*	*			trans	-126	95.7	149.3	-162.6	68.9	0	0	0	105.8	S61	S61-D63 PolarHBondContact O-N 3.47Å
64	S	56.7	Low	57.2	Low	111 Å²	111	146.9 Å²	146.9	78%	0.776	81%	0.808	S	S	*	*			trans	-80.2	110.6	161.6	165.6	0	0	0	0	105.5
65	D	67.3	Low	57.6	Low	140 Å²	140	143 Å²	143	75%	0.749	81%	0.81	S	S	*	*			trans	-139.6	121	157.3	-145.9	-113.2	0	0	0	111.2
66	D	71.1	Confident	57.9	Low	128 Å²	128	144.4 Å²	144.4	68%	0.684	81%	0.811	S	S	*	*			trans	-61.9	132	175	171.1	62.7	0	0	0	111
67	S	61.7	Low	58.6	Low	109 Å²	109	145.9 Å²	145.9	76%	0.762	81%	0.814	S	S	*	*			trans	-161.3	93.1	161.2	-76.6	0	0	0	0	110
68	E	68.8	Low	58.8	Low	181 Å²	181	141.6 Å²	141.6	85%	0.846	82%	0.819	S	S	*	*			trans	-64.9	134.6	163.8	-61.5	-117.6	132.2	0	0	110.6
69	V	55.3	Low	59	Low	218 Å²	218	141.8 Å²	141.8	100%	1.321	81%	0.812	S	S	*	*			trans	-139.4	0	157.9	-62.5	0	0	0	0	111.4

Retrieved 69 of 69 residues in 75 ms (Link to these results)

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