A0A087WRD9_MOUSE Loading...

NOP58 ribonucleoprotein

AlphaFold DB , UniProt , Accession A0A087WRD9, Species MOUSE (Mus musculus, Mouse), Gene Nop58, Length 28 aa.

						>A0A087WRD9_MOUSE|A0A087WRD9|Nop58
MEGKINKQLKKVLKKIVKEAHEPLAVAD
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	58.5	Low	82.8	Confident	235 Å²	235	142.6 Å²	142.6	100%	1.158	69%	0.693	S	S	*	*				0	-11.2	0	-98	171.3	169.2	0	113.9	G3	M1-G3 PolarHBondContact O-N 3.22Å; M1-G3 VanDerWaalsContact C-N 3.33Å
2	E	62	Low	83.8	Confident	181 Å²	181	137.4 Å²	137.4	85%	0.846	68%	0.676	S	S	*	*	T	Hydrogen-bonded Turn	trans	-67.8	-14.5	-174	-76.6	173	128.2	0	117.3
3	G	74.7	Confident	84.3	Confident	45 Å²	45	134.3 Å²	134.3	46%	0.464	66%	0.663	S	S	.	*	H	α-helix	trans	-80.3	-18.4	-172.2	0	0	0	0	116.5	M1 K7	M1-G3 PolarHBondContact O-N 3.22Å; M1-G3 VanDerWaalsContact C-N 3.33Å; G3-K7 WeakPolarHBondContact O-CG 3.41Å; G3-K7 PolarHBondContact O-N 3.3Å
4	K	79.1	Confident	84.8	Confident	170 Å²	170	136.6 Å²	136.6	74%	0.739	67%	0.667	S	S	*	*	H	α-helix	trans	-77	-41.6	-173.8	-75.6	-175.1	178.8	-179.7	112.3	K7 Q8	K4-K7 PolarHBondContact O-N 3.29Å; K4-Q8 PolarHBondContact O-N 3.21Å
5	I	86.2	Confident	85.1	Confident	125 Å²	125	136.9 Å²	136.9	64%	0.641	66%	0.664	S	S	*	*	H	α-helix	trans	-66.1	-46.2	-179.6	-63.6	172	0	0	110.2	K7 Q8 L9	I5-K7 VanDerWaalsContact C-N 3.29Å; I5-K7 PolarHBondContact O-N 3.41Å; I5-Q8 PolarHBondContact O-N 3.09Å; I5-Q8 VanDerWaalsContact O-N 3.09Å; I5-L9 PolarHBondContact O-N 3.09Å
6	N	88.3	Confident	85.3	Confident	115 Å²	115	134.3 Å²	134.3	62%	0.615	65%	0.652	S	S	*	*	H	α-helix	trans	-60.7	-36.5	178.5	-110.7	4.1	0	0	113.2	K10	N6-K10 WeakPolarHBondContact O-CB 3.36Å; N6-K10 PolarHBondContact O-N 3.44Å
7	K	91.3	Very high	85.3	Confident	154 Å²	154	131 Å²	131	67%	0.67	64%	0.642	S	S	*	*	H	α-helix	trans	-67.5	-37.8	175.5	-77.8	178.6	-179.8	-178.9	112.4	G3 K4 I5 K11	G3-K7 WeakPolarHBondContact O-CG 3.41Å; G3-K7 PolarHBondContact O-N 3.3Å; K4-K7 PolarHBondContact O-N 3.29Å; I5-K7 VanDerWaalsContact C-N 3.29Å; I5-K7 PolarHBondContact O-N 3.41Å; K7-K11 WeakPolarHBondContact O-CG 3.46Å; K7-K11 PolarHBondContact O-N 3.43Å
8	Q	92.3	Very high	85.3	Confident	136 Å²	136	131.8 Å²	131.8	64%	0.636	64%	0.642	S	S	*	*	H	α-helix	trans	-69.2	-45.6	176.3	-74.6	-178.3	-24.3	0	111	K4 I5 K10 K11 V12	K4-Q8 PolarHBondContact O-N 3.21Å; I5-Q8 PolarHBondContact O-N 3.09Å; I5-Q8 VanDerWaalsContact O-N 3.09Å; Q8-K10 VanDerWaalsContact C-N 3.35Å; Q8-K10 PolarHBondContact O-N 3.18Å; Q8-K11 VanDerWaalsContact O-N 3.11Å; Q8-K11 PolarHBondContact O-N 3.32Å; Q8-K11 WeakPolarHBondContact O-CB 3.49Å; Q8-V12 PolarHBondContact O-N 3.11Å; Q8-V12 WeakPolarHBondContact O-CG2 3.39Å
9	L	92.5	Very high	85	Confident	93 Å²	93	131.8 Å²	131.8	49%	0.487	64%	0.64	S	S	.	*	H	α-helix	trans	-58.9	-45.5	178.1	-174.1	61.7	0	0	111.8	I5 K11 V12 L13	I5-L9 PolarHBondContact O-N 3.09Å; L9-K11 VanDerWaalsContact C-N 3.29Å; L9-K11 PolarHBondContact O-N 3.31Å; L9-V12 PolarHBondContact O-N 3.39Å; L9-L13 HydrophobicContact CG-CD1 4.23Å; L9-L13 WeakPolarHBondContact O-CG 3.48Å; L9-L13 PolarHBondContact O-N 3.21Å
10	K	92.5	Very high	84.5	Confident	164 Å²	164	129.2 Å²	129.2	71%	0.713	64%	0.641	S	S	*	*	H	α-helix	trans	-60.4	-36	176.8	-169.7	173.4	-175.9	173.8	113	N6 Q8 K14	N6-K10 WeakPolarHBondContact O-CB 3.36Å; N6-K10 PolarHBondContact O-N 3.44Å; Q8-K10 VanDerWaalsContact C-N 3.35Å; Q8-K10 PolarHBondContact O-N 3.18Å; K10-K14 PolarHBondContact O-N 3.02Å; K10-K14 WeakPolarHBondContact O-CB 3.47Å
11	K	93.9	Very high	83.6	Confident	151 Å²	151	130.1 Å²	130.1	66%	0.657	64%	0.643	S	S	*	*	H	α-helix	trans	-69	-42.1	176.8	-76.6	-179.7	-179.5	-175.1	111.9	K7 Q8 L9 K14 K15	K7-K11 WeakPolarHBondContact O-CG 3.46Å; K7-K11 PolarHBondContact O-N 3.43Å; Q8-K11 VanDerWaalsContact O-N 3.11Å; Q8-K11 PolarHBondContact O-N 3.32Å; Q8-K11 WeakPolarHBondContact O-CB 3.49Å; L9-K11 VanDerWaalsContact C-N 3.29Å; L9-K11 PolarHBondContact O-N 3.31Å; K11-K14 PolarHBondContact O-N 3.22Å; K11-K15 PolarHBondContact O-N 3.4Å
12	V	93.9	Very high	84	Confident	80 Å²	80	125 Å²	125	49%	0.485	62%	0.616	S	S	.	*	H	α-helix	trans	-62.7	-49.2	178.4	173.4	0	0	0	110.3	Q8 L9 K14 K15 I16	Q8-V12 PolarHBondContact O-N 3.11Å; Q8-V12 WeakPolarHBondContact O-CG2 3.39Å; L9-V12 PolarHBondContact O-N 3.39Å; V12-K14 VanDerWaalsContact C-N 3.3Å; V12-K14 PolarHBondContact O-N 3.03Å; V12-K15 WeakPolarHBondContact O-CB 3.49Å; V12-K15 PolarHBondContact O-N 3.06Å; V12-K15 VanDerWaalsContact O-N 3.09Å; V12-I16 PolarHBondContact O-N 3.31Å; V12-I16 VanDerWaalsContact O-N 3.07Å; V12-I16 HydrophobicContact CG1-CD1 3.88Å; V12-I16 WeakPolarHBondContact O-CG1 3.41Å
13	L	90.5	Very high	84.2	Confident	97 Å²	97	121.8 Å²	121.8	51%	0.508	61%	0.611	S	S	.	*	H	α-helix	trans	-59.6	-40.5	178.8	-67.6	173.1	0	0	112.3	L9 K15 I16 V17	L9-L13 HydrophobicContact CG-CD1 4.23Å; L9-L13 WeakPolarHBondContact O-CG 3.48Å; L9-L13 PolarHBondContact O-N 3.21Å; L13-K15 PolarHBondContact O-N 2.93Å; L13-K15 VanDerWaalsContact C-N 3.3Å; L13-I16 PolarHBondContact O-N 3.35Å; L13-V17 WeakPolarHBondContact O-CB 3.48Å; L13-V17 VanDerWaalsContact O-CG2 3.28Å; L13-V17 WeakPolarHBondContact O-CG2 3.28Å; L13-V17 PolarHBondContact O-N 3.04Å
14	K	91.1	Very high	83.8	Confident	167 Å²	167	127.1 Å²	127.1	73%	0.726	63%	0.629	S	S	*	*	H	α-helix	trans	-64.2	-33.5	177.5	-169.6	172.9	-178	178	112.9	K10 K11 V12 K18	K10-K14 PolarHBondContact O-N 3.02Å; K10-K14 WeakPolarHBondContact O-CB 3.47Å; K11-K14 PolarHBondContact O-N 3.22Å; V12-K14 VanDerWaalsContact C-N 3.3Å; V12-K14 PolarHBondContact O-N 3.03Å; K14-K18 VanDerWaalsContact O-N 3.11Å; K14-K18 PolarHBondContact O-N 3.37Å; K14-K18 WeakPolarHBondContact O-CB 3.42Å
15	K	89.6	Confident	83.2	Confident	141 Å²	141	123.8 Å²	123.8	61%	0.613	63%	0.633	S	S	*	*	H	α-helix	trans	-69.9	-49.3	175.3	-74.7	-175.1	174.7	-168.8	111.5	K11 V12 L13 V17 K18 E19	K11-K15 PolarHBondContact O-N 3.4Å; V12-K15 WeakPolarHBondContact O-CB 3.49Å; V12-K15 PolarHBondContact O-N 3.06Å; V12-K15 VanDerWaalsContact O-N 3.09Å; L13-K15 PolarHBondContact O-N 2.93Å; L13-K15 VanDerWaalsContact C-N 3.3Å; K15-V17 VanDerWaalsContact C-N 3.29Å; K15-V17 PolarHBondContact O-N 3.11Å; K15-K18 WeakPolarHBondContact O-CB 3.24Å; K15-K18 PolarHBondContact O-N 2.86Å; K15-E19 WeakPolarHBondContact O-CG 3.5Å; K15-E19 PolarHBondContact O-N 3.07Å
16	I	88.1	Confident	82.3	Confident	94 Å²	94	123.9 Å²	123.9	48%	0.482	64%	0.639	S	S	.	*	H	α-helix	trans	-56.5	-46.5	178	-65.2	168.9	0	0	110.4	V12 L13 K18 E19 A20	V12-I16 PolarHBondContact O-N 3.31Å; V12-I16 VanDerWaalsContact O-N 3.07Å; V12-I16 HydrophobicContact CG1-CD1 3.88Å; V12-I16 WeakPolarHBondContact O-CG1 3.41Å; L13-I16 PolarHBondContact O-N 3.35Å; I16-K18 VanDerWaalsContact C-N 3.34Å; I16-K18 PolarHBondContact O-N 3.35Å; I16-E19 PolarHBondContact O-N 3.4Å; I16-A20 WeakPolarHBondContact O-CB 3.4Å; I16-A20 PolarHBondContact O-N 3.46Å; I16-A20 VanDerWaalsContact O-CB 3.24Å
17	V	85.8	Confident	81.5	Confident	79 Å²	79	123 Å²	123	48%	0.479	65%	0.647	S	S	.	*	H	α-helix	trans	-61.5	-43.7	177.2	171.4	0	0	0	110.8	L13 K15 A20 H21	L13-V17 WeakPolarHBondContact O-CB 3.48Å; L13-V17 VanDerWaalsContact O-CG2 3.28Å; L13-V17 WeakPolarHBondContact O-CG2 3.28Å; L13-V17 PolarHBondContact O-N 3.04Å; K15-V17 VanDerWaalsContact C-N 3.29Å; K15-V17 PolarHBondContact O-N 3.11Å; V17-A20 PolarHBondContact O-N 2.71Å; V17-H21 PolarHBondContact O-N 3.09Å; V17-H21 VanDerWaalsContact O-N 3.09Å; V17-H21 PolarHBondContact O-ND1 3.42Å
18	K	85.1	Confident	80.2	Confident	146 Å²	146	127 Å²	127	64%	0.635	68%	0.676	S	S	*	*	H	α-helix	trans	-63.3	-44.2	178.7	-174.1	-179.1	175.6	-170.3	112	K14 K15 I16 H21 E22	K14-K18 VanDerWaalsContact O-N 3.11Å; K14-K18 PolarHBondContact O-N 3.37Å; K14-K18 WeakPolarHBondContact O-CB 3.42Å; K15-K18 WeakPolarHBondContact O-CB 3.24Å; K15-K18 PolarHBondContact O-N 2.86Å; I16-K18 VanDerWaalsContact C-N 3.34Å; I16-K18 PolarHBondContact O-N 3.35Å; K18-H21 PolarHBondContact O-N 2.98Å; K18-E22 PolarHBondContact O-N 2.85Å
19	E	79.2	Confident	79.6	Confident	131 Å²	131	126.6 Å²	126.6	61%	0.612	68%	0.678	S	S	*	*	H	α-helix	trans	-67.6	-36.7	178.7	-70.8	166.8	-158.1	0	111.7	K15 I16 H21 E22	K15-E19 WeakPolarHBondContact O-CG 3.5Å; K15-E19 PolarHBondContact O-N 3.07Å; I16-E19 PolarHBondContact O-N 3.4Å; E19-H21 PolarHBondContact O-N 2.8Å; E19-H21 VanDerWaalsContact C-N 3.32Å; E19-E22 PolarHBondContact O-N 3.03Å
20	A	74.7	Confident	78.9	Confident	79 Å²	79	128.4 Å²	128.4	65%	0.653	69%	0.688	S	S	*	*	H	α-helix	trans	-72.3	-22.4	176.3	0	0	0	0	113.8	I16 V17	I16-A20 WeakPolarHBondContact O-CB 3.4Å; I16-A20 PolarHBondContact O-N 3.46Å; I16-A20 VanDerWaalsContact O-CB 3.24Å; V17-A20 PolarHBondContact O-N 2.71Å
21	H	66.4	Low	78.1	Confident	149 Å²	149	126.4 Å²	126.4	69%	0.69	69%	0.687	S	S	*	*	T	Hydrogen-bonded Turn	trans	-89.1	-8.4	174.9	-75.6	83.5	0	0	113.2	V17 K18 E19 P23	V17-H21 PolarHBondContact O-N 3.09Å; V17-H21 VanDerWaalsContact O-N 3.09Å; V17-H21 PolarHBondContact O-ND1 3.42Å; K18-H21 PolarHBondContact O-N 2.98Å; E19-H21 PolarHBondContact O-N 2.8Å; E19-H21 VanDerWaalsContact C-N 3.32Å; H21-P23 WeakPolarHBondContact O-CD 3.22Å
22	E	66.7	Low	77.2	Confident	127 Å²	127	124.9 Å²	124.9	59%	0.593	69%	0.689	S	S	*	*	S	Bend	trans	-72.8	113.3	161.9	-81.2	178.9	-172.7	0	106.5	K18 E19 L24	K18-E22 PolarHBondContact O-N 2.85Å; E19-E22 PolarHBondContact O-N 3.03Å; E22-L24 PolarHBondContact O-N 3.35Å
23	P	66.1	Low	76.2	Confident	114 Å²	114	127.8 Å²	127.8	74%	0.74	70%	0.702	S	S	*	*			trans	-56	123	171.6	24.3	-30.9	0	0	105.8	H21 A25	H21-P23 WeakPolarHBondContact O-CD 3.22Å; P23-A25 VanDerWaalsContact C-N 3.34Å; P23-A25 PolarHBondContact O-N 3.47Å
24	L	65.7	Low	75.2	Confident	158 Å²	158	129.8 Å²	129.8	83%	0.827	72%	0.715	S	S	*	*			trans	-47.6	109.8	169.8	-74.2	166.5	0	0	105.1	E22 V26	E22-L24 PolarHBondContact O-N 3.35Å; L24-V26 PolarHBondContact O-N 3.38Å
25	A	67.9	Low	74.1	Confident	100 Å²	100	127.1 Å²	127.1	83%	0.826	71%	0.714	S	S	*	*			trans	-66.7	85.7	174.6	0	0	0	0	105.1	P23 A27	P23-A25 VanDerWaalsContact C-N 3.34Å; P23-A25 PolarHBondContact O-N 3.47Å; A25-A27 VanDerWaalsContact C-N 3.32Å; A25-A27 PolarHBondContact O-N 3.03Å
26	V	66.8	Low	72.9	Confident	127 Å²	127	126.1 Å²	126.1	77%	0.77	72%	0.721	S	S	*	*			trans	-63.9	103.4	165.2	-82.4	0	0	0	104.1	L24 D28	L24-V26 PolarHBondContact O-N 3.38Å; V26-D28 PolarHBondContact O-N 2.69Å
27	A	71.1	Confident	71.6	Confident	96 Å²	96	128.8 Å²	128.8	79%	0.793	74%	0.741	S	S	*	*			trans	-59.4	128.7	165.1	0	0	0	0	106.6	A25	A25-A27 VanDerWaalsContact C-N 3.32Å; A25-A27 PolarHBondContact O-N 3.03Å
28	D	63.8	Low	70.3	Confident	239 Å²	239	133.3 Å²	133.3	100%	1.278	77%	0.765	S	S	*	*			trans	-51.1	0	175.1	-73.6	-44.3	0	0	112.2	V26	V26-D28 PolarHBondContact O-N 2.69Å

Retrieved 28 of 28 residues in 44.9 ms (Link to these results)

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