A0A087WRM5_MOUSE Loading...

Nucleolin

AlphaFold DB , UniProt , Accession A0A087WRM5, Species MOUSE (Mus musculus, Mouse), Gene Ncl, Length 76 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M72.9Confident71.6Confident248 Ų248155.5 Ų155.5100%1.22284%0.839SS**  0134.20-156.5164.2158.300107
2A73.9Confident70.9Confident89 Ų89152.6 Ų152.674%0.73684%0.839SS**PPolyproline II helixtrans-68.4151.6-158.800000114
3P79.6Confident70.5Confident115 Ų115153 Ų15375%0.74783%0.831SS**PPolyproline II helixtrans-64.7149.1172.628.6-34.1000110.8
4P82.4Confident70.3Confident113 Ų113150.1 Ų150.173%0.73482%0.815SS**PPolyproline II helixtrans-61.6150.4176.827.2-34000110.8K6P4-K6 PolarHBondContact O-N 2.7Å
5P79.8Confident69.7Low122 Ų122153.3 Ų153.379%0.79282%0.822SS**PPolyproline II helixtrans-59.8138.5177.126.8-33.3000109.5E7P5-E7 PolarHBondContact O-N 3.36Å
6K75.9Confident69.4Low198 Ų198154.9 Ų154.986%0.86182%0.823SS**PPolyproline II helixtrans-67.9122.8168.2-72.2-176.8173.772.50106.9P4 V8P4-K6 PolarHBondContact O-N 2.7Å; K6-V8 PolarHBondContact O-N 3.05Å; K6-V8 VanDerWaalsContact C-N 3.34Å
7E69.3Low69.2Low193 Ų193156.1 Ų156.190%0.90283%0.825SS**  trans-63.6104.2159.3-60.9-169.8110.800105.5P5 E9P5-E7 PolarHBondContact O-N 3.36Å; E7-E9 PolarHBondContact O-N 2.85Å
8V70.9Confident69.1Low135 Ų135153.8 Ų153.882%0.81882%0.824SS**  trans-64.9125169.359.70000105.8K6K6-V8 PolarHBondContact O-N 3.05Å; K6-V8 VanDerWaalsContact C-N 3.34Å
9E63Low68.6Low181 Ų181154.8 Ų154.885%0.84682%0.823SS**  trans-48.2143.4178.3-86.9171.182.200110.4E7 D11E7-E9 PolarHBondContact O-N 2.85Å; E9-D11 PolarHBondContact O-N 2.98Å
10E59.2Low68.5Low182 Ų182154.4 Ų154.485%0.8582%0.821SS**  trans-31.1108.4169.7-68.3175.292.900110.9S12E10-S12 PolarHBondContact O-N 3.46Å
11D60.7Low68.3Low135 Ų135155.1 Ų155.172%0.72282%0.82SS**  trans-6083.2163.7-161.9-115.4000106.5E9 E13E9-D11 PolarHBondContact O-N 2.98Å; D11-E13 PolarHBondContact O-N 2.99Å
12S63.4Low67.8Low120 Ų120149.3 Ų149.384%0.83979%0.794SS**  trans-73.175.2169.1-710000107.3E10E10-S12 PolarHBondContact O-N 3.46Å
13E65.2Low67.3Low158 Ų158151.4 Ų151.474%0.73879%0.793SS**  trans-130.597.6167.3-173.3178.3102.500102.7D11D11-E13 PolarHBondContact O-N 2.99Å
14D68.6Low66.4Low113 Ų113150.3 Ų150.360%0.60479%0.788SS**  172.493.474.4172.7-134.6000104.9
15E61.4Low65.7Low198 Ų198150 Ų15093%0.92579%0.788SS**  trans-110.651.8173.4-163162.4113.100109.6
16E64.9Low65Low179 Ų179146.9 Ų146.984%0.83678%0.778SS**  trans-13768.8167.5-72.6-153.8112.200112.2
17M65.4Low64.4Low174 Ų174145.5 Ų145.586%0.85778%0.775SS**  trans-116.176.1159.8-68.1-91.4-17900108.8
18S66.7Low64.1Low115 Ų115144.4 Ų144.480%0.80477%0.77SS**  trans-146.188.8164.1-173.90000110.4
19E60.2Low63.7Low173 Ų173145 Ų14581%0.80876%0.764SS**  trans-143.682.5146.3-159.1130.371.600106.1E21E19-E21 HydrophobicContact CG-CG 4.01Å; E19-E21 PolarHBondContact O-N 3.09Å
20D67.2Low63.9Low147 Ų147141 Ų14179%0.78675%0.752SS**  trans-61.688155.6-174.3-114.5000104.8D22D20-D22 PolarHBondContact O-N 2.86Å
21E63.6Low64.4Low169 Ų169137.2 Ų137.279%0.7974%0.741SS**  trans-63.988.3163.7-74.9-169.9108.100105.9E19 D23E19-E21 HydrophobicContact CG-CG 4.01Å; E19-E21 PolarHBondContact O-N 3.09Å; E21-D23 PolarHBondContact O-N 3.06Å
22D61.8Low65Low126 Ų126137 Ų13767%0.67474%0.738SS**  trans-5686.8155-175.7-121.6000105.9D20 S24D20-D22 PolarHBondContact O-N 2.86Å; D22-S24 PolarHBondContact O-N 3.02Å; D22-S24 WeakPolarHBondContact OD1-CB 3.25Å
23D64.4Low65.5Low134 Ų134136.7 Ų136.772%0.71773%0.733SS**  trans-64.865.8163.9-174.1-113.9000107.5E21 S25E21-D23 PolarHBondContact O-N 3.06Å; D23-S25 PolarHBondContact O-N 3.02Å
24S61.3Low65.8Low92 Ų92138.1 Ų138.164%0.64374%0.74SS**  trans-76.463.9161.1-147.80000107.2D22 G26D22-S24 PolarHBondContact O-N 3.02Å; D22-S24 WeakPolarHBondContact OD1-CB 3.25Å; S24-G26 PolarHBondContact O-N 3.25Å
25S66.8Low65.9Low105 Ų105142.3 Ų142.373%0.73475%0.753SS**  trans-5891.9157.4-105.80000107.2D23D23-S25 PolarHBondContact O-N 3.02Å
26G65.4Low66.2Low57 Ų57143.3 Ų143.359%0.58875%0.754SS**  trans-173.637.1-173.200000111.5S24 E28S24-G26 PolarHBondContact O-N 3.25Å; G26-E28 PolarHBondContact O-N 2.96Å
27E62.8Low66.2Low170 Ų170137.2 Ų137.279%0.79474%0.739SS**  trans-62.580.3157.854.1138.7-165.600109.1E29E27-E29 PolarHBondContact O-N 2.89Å
28E62.4Low66.4Low170 Ų170139 Ų13979%0.79474%0.742SS**  trans-62.397.4146.6-167.9-178.6104.300105.3G26 V30G26-E28 PolarHBondContact O-N 2.96Å; E28-V30 WeakPolarHBondContact OE1-CG2 3.09Å; E28-V30 HydrophobicContact CG-CG2 4.13Å; E28-V30 PolarHBondContact O-N 3.12Å
29E64.3Low66Low146 Ų146143.5 Ų143.568%0.68275%0.747SS**  trans-58.475.2173.9-170.2-153.889.400109.4E27 V31E27-E29 PolarHBondContact O-N 2.89Å; E29-V31 HydrophobicContact CG-CG2 3.58Å; E29-V31 PolarHBondContact O-N 2.72Å; E29-V31 WeakPolarHBondContact OE1-CG2 3.48Å
30V65.8Low66.2Low98 Ų98139.2 Ų139.259%0.59474%0.741SS**  trans-78.784.3169.5-174.60000107E28 I32E28-V30 WeakPolarHBondContact OE1-CG2 3.09Å; E28-V30 HydrophobicContact CG-CG2 4.13Å; E28-V30 PolarHBondContact O-N 3.12Å; V30-I32 VanDerWaalsContact C-N 3.3Å; V30-I32 HydrophobicContact CG1-CG1 4.04Å; V30-I32 PolarHBondContact O-N 2.79Å
31V69.6Low65.8Low103 Ų103138.9 Ų138.962%0.62475%0.745SS**  trans-66.889.6171.6-1750000108.9E29 P33E29-V31 HydrophobicContact CG-CG2 3.58Å; E29-V31 PolarHBondContact O-N 2.72Å; E29-V31 WeakPolarHBondContact OE1-CG2 3.48Å; V31-P33 WeakPolarHBondContact O-CD 3.38Å; V31-P33 VanDerWaalsContact O-CD 3.25Å
32I74.6Confident65.7Low131 Ų131137 Ų13767%0.67275%0.745SS**  trans-71.7116.8170.7-56.7179.5000107.7V30 Q34V30-I32 VanDerWaalsContact C-N 3.3Å; V30-I32 HydrophobicContact CG1-CG1 4.04Å; V30-I32 PolarHBondContact O-N 2.79Å; I32-Q34 PolarHBondContact O-N 3.3Å
33P72.2Confident65.9Low112 Ų112137 Ų13773%0.72775%0.75SS**  trans-63.3113.1177.7-18.531.3000109.1V31 K35V31-P33 WeakPolarHBondContact O-CD 3.38Å; V31-P33 VanDerWaalsContact O-CD 3.25Å; P33-K35 PolarHBondContact O-N 3.45Å
34Q71.5Confident65.7Low189 Ų189136 Ų13688%0.88375%0.75SS**  trans-64.1100.2175-66.4-153.2-3.300108.7I32 K36I32-Q34 PolarHBondContact O-N 3.3Å; Q34-K36 PolarHBondContact O-N 3.03Å
35K71.9Confident66Low201 Ų201136 Ų13687%0.87476%0.756SS**  trans-53.4118162.9-87.9-177.3172.8171.50106.7P33 G37P33-K35 PolarHBondContact O-N 3.45Å; K35-G37 PolarHBondContact O-N 2.87Å
36K68.4Low66.1Low219 Ų219140.6 Ų140.695%0.95276%0.763SS**  trans-56.387174.4-84.8-177175.1175.70109.8Q34Q34-K36 PolarHBondContact O-N 3.03Å
37G63.8Low66Low51 Ų51147.4 Ų147.453%0.52678%0.777SS.*  trans-130.588.7178.700000107.3K35 K39K35-G37 PolarHBondContact O-N 2.87Å; G37-K39 PolarHBondContact O-N 2.89Å
38K69.1Low66.1Low212 Ų212145.1 Ų145.192%0.92277%0.774SS**  trans4.8107.1161.4-44.1178.5-173.2-170.40113.4
39K59.4Low66.2Low209 Ų209143.4 Ų143.491%0.90977%0.774SS**  trans-134.3139.4161.3-72.9-155.8176.8-171.30113G37G37-K39 PolarHBondContact O-N 2.89Å
40A63.3Low66Low82 Ų82142.2 Ų142.268%0.67878%0.777SS**  trans-56.9147.9-16300000113.8T42A40-T42 PolarHBondContact O-N 2.97Å
41T59Low65.8Low141 Ų141141.8 Ų141.887%0.86578%0.779SS**  trans-46105157.630.10000109.9T43T41-T43 PolarHBondContact O-N 2.83Å
42T62.8Low65.4Low130 Ų130146.1 Ų146.180%0.79879%0.792SS**  trans-82.7111.5167.577.90000106.3A40A40-T42 PolarHBondContact O-N 2.97Å
43T65Low64.9Low125 Ų125145.4 Ų145.477%0.76779%0.794SS**  trans-83.7121.3166.6-57.70000106.1T41 A45T41-T43 PolarHBondContact O-N 2.83Å; T43-A45 PolarHBondContact O-N 2.73Å
44P61Low64.2Low113 Ų113149.5 Ų149.573%0.73480%0.8SS**  trans-64.1115.1177.324.3-31.1000108.8K46P44-K46 VanDerWaalsContact O-N 3.09Å; P44-K46 PolarHBondContact O-N 3.11Å
45A67.8Low63.7Low93 Ų93149.4 Ų149.477%0.76980%0.797SS**  trans-64.2110.317300000108.2T43 K47T43-A45 PolarHBondContact O-N 2.73Å; A45-K47 PolarHBondContact O-N 2.97Å
46K67.9Low62.9Low201 Ų201143.9 Ų143.987%0.87479%0.789SS**  trans-54.1112.9170-80.8178.2172.3175.60108.1P44 V48P44-K46 VanDerWaalsContact O-N 3.09Å; P44-K46 PolarHBondContact O-N 3.11Å; K46-V48 PolarHBondContact O-N 2.89Å
47K64.4Low62.6Low200 Ų200137.9 Ų137.987%0.8778%0.78SS**  trans-64.8104.2169.9-69.1-168.5176.8178.50107.7A45 V49A45-K47 PolarHBondContact O-N 2.97Å; K47-V49 PolarHBondContact O-N 2.92Å
48V63.2Low62.3Low121 Ų121141.4 Ų141.473%0.73379%0.791SS**  trans-73.8108.1167.8177.10000106.5K46 V50K46-V48 PolarHBondContact O-N 2.89Å; V48-V50 HydrophobicContact CG1-CG2 4.27Å; V48-V50 PolarHBondContact O-N 2.78Å; V48-V50 VanDerWaalsContact O-N 3.12Å
49V64.5Low62.1Low134 Ų134136.9 Ų136.981%0.81278%0.783SS**  trans-63.3107.5166.2164.70000107.2K47K47-V49 PolarHBondContact O-N 2.92Å
50V61.5Low62.3Low122 Ų122133 Ų13374%0.73978%0.777SS**  trans-88.5106.3168.31760000106.7V48 Q52V48-V50 HydrophobicContact CG1-CG2 4.27Å; V48-V50 PolarHBondContact O-N 2.78Å; V48-V50 VanDerWaalsContact O-N 3.12Å; V50-Q52 PolarHBondContact O-N 3Å
51S61Low62.1Low89 Ų89134.7 Ų134.762%0.62278%0.781SS**  trans-56.3121.9175.3520000110.9T53S51-T53 PolarHBondContact O-N 3.19Å; S51-T53 PolarHBondContact O-OG1 3.28Å
52Q60.8Low62.4Low194 Ų194132.6 Ų132.691%0.90778%0.778SS**  trans-63.4106.9175.7-71.7179.5-47.200110V50 K54V50-Q52 PolarHBondContact O-N 3Å; Q52-K54 PolarHBondContact O-N 2.74Å; Q52-K54 VanDerWaalsContact C-N 3.29Å
53T63.7Low62.4Low115 Ų115136.2 Ų136.271%0.70678%0.783SS**  trans-80.878177.1-35.80000109.4S51 K55S51-T53 PolarHBondContact O-N 3.19Å; S51-T53 PolarHBondContact O-OG1 3.28Å; T53-K55 VanDerWaalsContact C-N 3.33Å; T53-K55 PolarHBondContact O-N 3.03Å
54K58.4Low62.3Low198 Ų198139.9 Ų139.986%0.86179%0.788SS**  trans-74.690171.5-147.1-177.7-174-165.10108.3Q52 A56Q52-K54 PolarHBondContact O-N 2.74Å; Q52-K54 VanDerWaalsContact C-N 3.29Å; K54-A56 VanDerWaalsContact C-N 3.26Å; K54-A56 PolarHBondContact O-N 2.93Å
55K61.6Low62.1Low187 Ų187138.9 Ų138.981%0.81379%0.79SS**  trans-66.488.7164.5-73.3-80.9-174.7179.60107.7T53 A57T53-K55 VanDerWaalsContact C-N 3.33Å; T53-K55 PolarHBondContact O-N 3.03Å; K55-A57 PolarHBondContact O-N 3.11Å; K55-A57 VanDerWaalsContact O-N 3.11Å
56A55Low61.6Low86 Ų86138.9 Ų138.971%0.71179%0.79SS**  trans-71.398.3163.300000107.5K54 V58K54-A56 VanDerWaalsContact C-N 3.26Å; K54-A56 PolarHBondContact O-N 2.93Å; A56-V58 PolarHBondContact O-N 3.03Å
57A62Low61.3Low93 Ų93135.7 Ų135.777%0.76979%0.787SS**  trans-67.9109.1165.100000107.3K55 P59K55-A57 PolarHBondContact O-N 3.11Å; K55-A57 VanDerWaalsContact O-N 3.11Å; A57-P59 VanDerWaalsContact O-CD 3.28Å; A57-P59 WeakPolarHBondContact O-CD 3.28Å
58V56.2Low61.4Low125 Ų125131.9 Ų131.976%0.75878%0.78SS**PPolyproline II helixtrans-68.2117173179.30000107.7A56 T60A56-V58 PolarHBondContact O-N 3.03Å; V58-T60 PolarHBondContact O-N 3.42Å
59P64.9Low61.2Low116 Ų116132 Ų13275%0.75378%0.784SS**PPolyproline II helixtrans-73.9116.4170.929.4-30.6000108.6A57 P61A57-P59 VanDerWaalsContact O-CD 3.28Å; A57-P59 WeakPolarHBondContact O-CD 3.28Å; P59-P61 WeakPolarHBondContact O-CD 3.49Å
60T64.2Low61.2Low128 Ų128129.1 Ų129.179%0.78578%0.781SS**PPolyproline II helixtrans-64.1125.3173.2-26.10000109.2V58 A62V58-T60 PolarHBondContact O-N 3.42Å; T60-A62 PolarHBondContact O-N 3.22Å; T60-A62 VanDerWaalsContact O-N 3.11Å
61P59.7Low61.2Low118 Ų118133 Ų13377%0.76679%0.788SS**  trans-68114.3172.624.4-29.8000109.1P59 K63P59-P61 WeakPolarHBondContact O-CD 3.49Å; P61-K63 PolarHBondContact O-N 3.08Å
62A65.7Low61.1Low97 Ų97138.9 Ų138.980%0.80280%0.802SS**  trans-61.5109.3174.200000109.1T60 K64T60-A62 PolarHBondContact O-N 3.22Å; T60-A62 VanDerWaalsContact O-N 3.11Å; A62-K64 PolarHBondContact O-N 3.46Å; A62-K64 VanDerWaalsContact O-N 3.08Å
63K62.3Low60.8Low206 Ų206134.3 Ų134.390%0.89680%0.798SS**  trans-56113.4176-152.8172.8-175.8176.30108.2P61 A65P61-K63 PolarHBondContact O-N 3.08Å; K63-A65 VanDerWaalsContact O-N 3.1Å; K63-A65 PolarHBondContact O-N 3.1Å
64K61.7Low60.2Low202 Ų202135.6 Ų135.688%0.87881%0.805SS**  trans-58.4114.9173.3-69.7-170.7176.8-1750108.4A62 A66A62-K64 PolarHBondContact O-N 3.46Å; A62-K64 VanDerWaalsContact O-N 3.08Å; K64-A66 PolarHBondContact O-N 3.34Å
65A57.5Low60Low92 Ų92130.8 Ų130.876%0.7680%0.802SS**  trans-68112.5165.300000107.4K63 V67K63-A65 VanDerWaalsContact O-N 3.1Å; K63-A65 PolarHBondContact O-N 3.1Å; A65-V67 PolarHBondContact O-N 2.94Å; A65-V67 VanDerWaalsContact O-N 3.11Å
66A58.1Low59.4Low93 Ų93131.9 Ų131.977%0.76983%0.825SS**  trans-62.4110.8165.900000107.5K64 T68K64-A66 PolarHBondContact O-N 3.34Å; A66-T68 PolarHBondContact O-N 3.14Å; A66-T68 VanDerWaalsContact O-N 3.14Å
67V61.8Low59.6Low134 Ų134134.2 Ų134.281%0.81283%0.83SS**  trans-70106.6167.9177.40000106.3A65 P69A65-V67 PolarHBondContact O-N 2.94Å; A65-V67 VanDerWaalsContact O-N 3.11Å; V67-P69 WeakPolarHBondContact O-CD 3.45Å
68T64.8Low59.5Low119 Ų119136.4 Ų136.473%0.7383%0.834SS**  trans-66.3124.3165.438.70000108.1A66 G70A66-T68 PolarHBondContact O-N 3.14Å; A66-T68 VanDerWaalsContact O-N 3.14Å; T68-G70 PolarHBondContact O-N 3.11Å
69P59.7Low59.7Low125 Ų125137 Ų13781%0.81284%0.838SS**  trans-69101.2167.925.5-28.1000107.3V67 K71V67-P69 WeakPolarHBondContact O-CD 3.45Å; P69-K71 PolarHBondContact O-N 3.39Å
70G63.8Low59.4Low73 Ų73138.2 Ų138.275%0.75384%0.843SS**  trans-55.1119.8174.700000110.1T68T68-G70 PolarHBondContact O-N 3.11Å
71K63.1Low59.1Low204 Ų204138.9 Ų138.989%0.88785%0.847SS**  trans-41.8134.7172.1-101177167.9-171.60111.6P69 A73P69-K71 PolarHBondContact O-N 3.39Å; K71-A73 PolarHBondContact O-N 3.18Å
72K58.6Low59Low212 Ų212140.3 Ų140.392%0.92285%0.852SS**  trans-49.4129161.7-65.1-179.4177.5-179.30110.1
73A53.3Low58.5Low98 Ų98143.4 Ų143.481%0.8186%0.855SS**  trans-126.7110.215400000106.9K71K71-A73 PolarHBondContact O-N 3.18Å
74V52.3Low58.3Low142 Ų142138.5 Ų138.586%0.86185%0.852SS**  trans-64.9130.6164.4900000106.2
75A53.2Low58Low96 Ų96133.3 Ų133.379%0.79385%0.85SS**  trans-110.7130.2161.200000106.4
76T49.5Very low58Low211 Ų211137 Ų137100%1.29486%0.858SS**  trans-53.50-172.9-55.20000114.1

Retrieved 76 of 76 residues in 73.3 ms (Link to these results)