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General transcription factor II E, polypeptide 2 (beta subunit)

Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.

AlphaFold DB , UniProt , Accession A0A087WSE8, Species MOUSE (Mus musculus, Mouse), Gene Gtf2e2, Length 127 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M59.7Low75.8Confident222 Ų222121.2 Ų121.2100%1.09459%0.593SS**  0125.20-70-65.3168.700107.3L6M1-L6 HydrophobicContact CB-CD1 3.89Å
2D78.4Confident76.4Confident87 Ų87124.5 Ų124.547%0.46560%0.603SS.*  trans-67.9128.4-175.9-167.8-40.9000110.9S4 L5 L6D2-S4 VanDerWaalsContact CG-OG 3.23Å; D2-S4 PolarHBondContact O-N 2.74Å; D2-S4 PolarHBondContact OD1-N 3.23Å; D2-S4 PolarHBondContact OD1-OG 3.3Å; D2-L5 HydrophobicContact CB-CD1 4.09Å; D2-L5 HydrophobicContact CB-CG 4.43Å; D2-L5 PolarHBondContact O-N 3.38Å; D2-L6 VanDerWaalsContact O-CD1 3.25Å; D2-L6 WeakPolarHBondContact O-CD1 3.38Å; D2-L6 PolarHBondContact O-N 2.74Å
3P74.9Confident77Confident88 Ų88126.2 Ų126.257%0.57161%0.605SS**Hα-helixtrans-64.4-16.6-177.826.2-36.3000114.8R7P3-R7 PolarHBondContact O-NE 3.32Å; P3-R7 VanDerWaalsContact O-NE 3.16Å
4S72.1Confident77.3Confident43 Ų43128.6 Ų128.630%0.30161%0.612SS.*Hα-helixtrans-72.4-44.3172.859.10000111.7D2 L6 R7 D8D2-S4 VanDerWaalsContact CG-OG 3.23Å; D2-S4 PolarHBondContact O-N 2.74Å; D2-S4 PolarHBondContact OD1-N 3.23Å; D2-S4 PolarHBondContact OD1-OG 3.3Å; S4-L6 VanDerWaalsContact C-N 3.32Å; S4-L6 PolarHBondContact O-N 2.94Å; S4-R7 WeakPolarHBondContact O-CB 3.11Å; S4-R7 PolarHBondContact O-N 2.91Å; S4-R7 VanDerWaalsContact O-N 3.12Å; S4-D8 PolarHBondContact O-N 3.18Å
5L74.6Confident77.2Confident118 Ų118133 Ų13362%0.61862%0.62SS**Hα-helixtrans-64.5-33.4179.4-76.6169.2000113.1D2 R9D2-L5 HydrophobicContact CB-CD1 4.09Å; D2-L5 HydrophobicContact CB-CG 4.43Å; D2-L5 PolarHBondContact O-N 3.38Å; L5-R9 WeakPolarHBondContact O-CB 3.31Å; L5-R9 PolarHBondContact O-N 2.84Å; L5-R9 VanDerWaalsContact O-N 3.13Å
6L73.9Confident77.2Confident82 Ų82128.4 Ų128.443%0.42961%0.612SS.*Hα-helixtrans-66-42.3173.5-82.289.2000111.5M1 D2 S4 R9 E10M1-L6 HydrophobicContact CB-CD1 3.89Å; D2-L6 VanDerWaalsContact O-CD1 3.25Å; D2-L6 WeakPolarHBondContact O-CD1 3.38Å; D2-L6 PolarHBondContact O-N 2.74Å; S4-L6 VanDerWaalsContact C-N 3.32Å; S4-L6 PolarHBondContact O-N 2.94Å; L6-R9 PolarHBondContact O-N 3.07Å; L6-E10 WeakPolarHBondContact O-CG 3.47Å; L6-E10 PolarHBondContact O-N 3.21Å; L6-E10 VanDerWaalsContact O-N 3.11Å
7R76.3Confident76.9Confident156 Ų156129.1 Ų129.159%0.58962%0.619SS**Hα-helixtrans-63.5-44.8177.9-80-177.5-84.7153.9-12.1111.8P3 S4 R9 E10 L11P3-R7 PolarHBondContact O-NE 3.32Å; P3-R7 VanDerWaalsContact O-NE 3.16Å; S4-R7 WeakPolarHBondContact O-CB 3.11Å; S4-R7 PolarHBondContact O-N 2.91Å; S4-R7 VanDerWaalsContact O-N 3.12Å; R7-R9 VanDerWaalsContact C-N 3.34Å; R7-R9 PolarHBondContact O-N 3.27Å; R7-E10 PolarHBondContact O-N 3.04Å; R7-L11 WeakPolarHBondContact O-CG 3.26Å; R7-L11 PolarHBondContact O-N 3.43Å
8D79.4Confident76.5Confident99 Ų99127.1 Ų127.153%0.52962%0.621SS.*Hα-helixtrans-65.4-38.2179.5-70.7-12.9000112.1S4 E10 L11 F12S4-D8 PolarHBondContact O-N 3.18Å; D8-E10 VanDerWaalsContact C-N 3.33Å; D8-E10 PolarHBondContact O-N 3.41Å; D8-L11 PolarHBondContact O-N 3.19Å; D8-F12 WeakPolarHBondContact O-CB 3.2Å; D8-F12 PolarHBondContact O-N 2.66Å
9R81Confident76.1Confident197 Ų197125.2 Ų125.274%0.74362%0.617SS**Hα-helixtrans-60.4-43174-179.3-175.8172.7-153.1-0.6111.8L5 L6 R7 K13L5-R9 WeakPolarHBondContact O-CB 3.31Å; L5-R9 PolarHBondContact O-N 2.84Å; L5-R9 VanDerWaalsContact O-N 3.13Å; L6-R9 PolarHBondContact O-N 3.07Å; R7-R9 VanDerWaalsContact C-N 3.34Å; R7-R9 PolarHBondContact O-N 3.27Å; R9-K13 WeakPolarHBondContact O-CB 3.46Å; R9-K13 PolarHBondContact O-N 2.98Å; R9-K13 VanDerWaalsContact O-N 3.08Å
10E82Confident75.4Confident130 Ų130124.6 Ų124.661%0.60762%0.623SS**Hα-helixtrans-67.1-42.4178.5-72.8174.5-166.600111.9L6 R7 D8 K13 K14L6-E10 WeakPolarHBondContact O-CG 3.47Å; L6-E10 PolarHBondContact O-N 3.21Å; L6-E10 VanDerWaalsContact O-N 3.11Å; R7-E10 PolarHBondContact O-N 3.04Å; D8-E10 VanDerWaalsContact C-N 3.33Å; D8-E10 PolarHBondContact O-N 3.41Å; E10-K13 PolarHBondContact O-N 3.35Å; E10-K14 WeakPolarHBondContact O-CB 3.33Å; E10-K14 PolarHBondContact O-N 2.92Å
11L81.8Confident74.7Confident111 Ų111124.7 Ų124.758%0.58163%0.631SS**Hα-helixtrans-62.9-43.3176.5-72.2174.4000112.1R7 D8 K14 R15R7-L11 WeakPolarHBondContact O-CG 3.26Å; R7-L11 PolarHBondContact O-N 3.43Å; D8-L11 PolarHBondContact O-N 3.19Å; L11-K14 PolarHBondContact O-N 3.34Å; L11-R15 WeakPolarHBondContact O-CB 3.4Å; L11-R15 PolarHBondContact O-N 2.92Å
12F83.1Confident74.5Confident161 Ų161120.1 Ų120.171%0.70662%0.615SS**Hα-helixtrans-63-46.1177.2-176.9-97.4000111.8D8 K14 R15 A16D8-F12 WeakPolarHBondContact O-CB 3.2Å; D8-F12 PolarHBondContact O-N 2.66Å; F12-K14 PolarHBondContact O-N 3.37Å; F12-R15 PolarHBondContact O-N 2.96Å; F12-A16 PolarHBondContact O-N 3.36Å
13K83.4Confident73.6Confident146 Ų146122.5 Ų122.564%0.63562%0.623SS**Hα-helixtrans-62.4-41.4176.5-173.2179.1176.7-175.50111.7R9 E10 R15 L17R9-K13 WeakPolarHBondContact O-CB 3.46Å; R9-K13 PolarHBondContact O-N 2.98Å; R9-K13 VanDerWaalsContact O-N 3.08Å; E10-K13 PolarHBondContact O-N 3.35Å; K13-R15 VanDerWaalsContact C-N 3.34Å; K13-R15 PolarHBondContact O-N 3.37Å; K13-L17 HydrophobicContact CG-CD1 4.15Å; K13-L17 WeakPolarHBondContact O-CG 3.25Å; K13-L17 PolarHBondContact O-N 3.16Å
14K81.6Confident72.6Confident161 Ų161128.1 Ų128.170%0.764%0.639SS**Hα-helixtrans-61.1-42.1174.9-106.1-174.9165.7176.30112E10 L11 F12 L17 S18E10-K14 WeakPolarHBondContact O-CB 3.33Å; E10-K14 PolarHBondContact O-N 2.92Å; L11-K14 PolarHBondContact O-N 3.34Å; F12-K14 PolarHBondContact O-N 3.37Å; K14-L17 PolarHBondContact O-N 3.43Å; K14-S18 WeakPolarHBondContact O-CB 3.26Å; K14-S18 PolarHBondContact O-N 2.74Å
15R75.9Confident71.4Confident194 Ų194135.7 Ų135.773%0.73266%0.66SS**Hα-helixtrans-68-41.9-179-167.9171.3-177163.50.6112.2L11 F12 K13 L17 S18 T19L11-R15 WeakPolarHBondContact O-CB 3.4Å; L11-R15 PolarHBondContact O-N 2.92Å; F12-R15 PolarHBondContact O-N 2.96Å; K13-R15 VanDerWaalsContact C-N 3.34Å; K13-R15 PolarHBondContact O-N 3.37Å; R15-L17 VanDerWaalsContact C-N 3.33Å; R15-L17 PolarHBondContact O-N 3.46Å; R15-S18 PolarHBondContact O-N 2.96Å; R15-T19 PolarHBondContact O-N 3.36Å
16A76.9Confident70.2Confident59 Ų59133.7 Ų133.749%0.48866%0.661SS.*Hα-helixtrans-64.2-36.5177.900000113F12 S18 T19F12-A16 PolarHBondContact O-N 3.36Å; A16-S18 VanDerWaalsContact C-N 3.3Å; A16-T19 PolarHBondContact O-OG1 3.18Å
17L72.5Confident68.3Low140 Ų140136.7 Ų136.773%0.73368%0.682SS**Hα-helixtrans-73.9-22176.8-68.7167.7000113K13 K14 R15K13-L17 HydrophobicContact CG-CD1 4.15Å; K13-L17 WeakPolarHBondContact O-CG 3.25Å; K13-L17 PolarHBondContact O-N 3.16Å; K14-L17 PolarHBondContact O-N 3.43Å; R15-L17 VanDerWaalsContact C-N 3.33Å; R15-L17 PolarHBondContact O-N 3.46Å
18S69.8Low67.1Low94 Ų94134.9 Ų134.966%0.65769%0.691SS**Hα-helixtrans-93.5-10.1-176.5-174.30000113.9K14 R15 A16 P20K14-S18 WeakPolarHBondContact O-CB 3.26Å; K14-S18 PolarHBondContact O-N 2.74Å; R15-S18 PolarHBondContact O-N 2.96Å; A16-S18 VanDerWaalsContact C-N 3.3Å; S18-P20 WeakPolarHBondContact O-CD 3.42Å
19T68.6Low65Low90 Ų90136.1 Ų136.155%0.55271%0.707SS**SBendtrans-82.9111.9175.449.50000109.6R15 A16 V21R15-T19 PolarHBondContact O-N 3.36Å; A16-T19 PolarHBondContact O-OG1 3.18Å; T19-V21 PolarHBondContact O-N 3.02Å
20P63.1Low63Low113 Ų113135.3 Ų135.373%0.73471%0.712SS**  trans-64129.7172.627.1-33.1000109.4S18 V22S18-P20 WeakPolarHBondContact O-CD 3.42Å; P20-V22 PolarHBondContact O-N 2.93Å
21V60.7Low61Low128 Ų128134.6 Ų134.678%0.77672%0.721SS**  trans-58.4119.2168.1152.20000107.9T19 E23T19-V21 PolarHBondContact O-N 3.02Å; V21-E23 VanDerWaalsContact C-N 3.35Å; V21-E23 HydrophobicContact CG1-CG 4.29Å; V21-E23 PolarHBondContact O-N 3.04Å; V21-E23 VanDerWaalsContact O-N 3.08Å
22V54.3Low59.8Low126 Ų126135 Ų13576%0.76473%0.731SS**  trans-77.192168.6177.20000107P20 K24P20-V22 PolarHBondContact O-N 2.93Å; V22-K24 PolarHBondContact O-N 3.11Å
23E59Low57.3Low137 Ų137132.6 Ų132.664%0.6473%0.734SS**  trans-59.3112.4161.5-76.4-163.6135.300108.2V21 R25V21-E23 VanDerWaalsContact C-N 3.35Å; V21-E23 HydrophobicContact CG1-CG 4.29Å; V21-E23 PolarHBondContact O-N 3.04Å; V21-E23 VanDerWaalsContact O-N 3.08Å; E23-R25 PolarHBondContact O-N 3.47Å; E23-R25 IonicContact OE2-NH1 3.34Å; E23-R25 PolarHBondContact OE2-NH1 2.96Å
24K53.7Low54.9Low206 Ų206130.5 Ų130.590%0.89674%0.738SS**  trans-78.898.7155.6-72.5-160.6176.6-173.80107.7V22V22-K24 PolarHBondContact O-N 3.11Å
25R47.8Very low52.4Low201 Ų201127.7 Ų127.776%0.75874%0.738SS**  trans-102.4142.9170.4-164.3175.4-156.41240.5107.7E23E23-R25 PolarHBondContact O-N 3.47Å; E23-R25 IonicContact OE2-NH1 3.34Å; E23-R25 PolarHBondContact OE2-NH1 2.96Å
26A49.3Very low50.4Low76 Ų76123.2 Ų123.263%0.62874%0.736SS**  cis-168.3174.4-5.800000108.2
27V34.7Very low48.5Very low145 Ų145125 Ų12588%0.87975%0.745SS**  -135.4145.6125.4-75.90000110.4
28P51.4Low46.9Very low119 Ų119127.2 Ų127.277%0.77375%0.749SS**  trans-102.7154.4-160.338.2-29000113
29S35Very low45.7Very low124 Ų124130.7 Ų130.787%0.86775%0.752SS**  trans-156140.1143.6-1620000110.1
30E37.9Very low44.6Very low180 Ų180134.2 Ų134.284%0.84176%0.76SS**  trans-83134.5-162-58.4177.696.400112.6
31S39.7Very low43.8Very low115 Ų115137 Ų13780%0.80476%0.761SS**  trans29.5-176.6142.9-430000121.9
32P57.9Low42.7Very low121 Ų121135.4 Ų135.479%0.78676%0.761SS**  -118.1147.3-9934.2-15.9000113.9
33S30.3Very low42.2Very low110 Ų110138.4 Ų138.477%0.76976%0.763SS**  trans-172117164.244.30000110.8
34S32.2Very low41.2Very low102 Ų102137 Ų13771%0.71376%0.764SS**  79.8129.610176.70000116.3
35S30.4Very low40.3Very low102 Ų102135 Ų13571%0.71376%0.758SS**  trans64110.8142.671.30000117.9
36S33Very low39.8Very low99 Ų99135 Ų13569%0.69277%0.766SS**  101.7118.884.774.50000113.1
37S38.2Very low39Very low96 Ų96134.8 Ų134.867%0.67177%0.771SS**  trans56.1127.5141.247.40000123.1
38K38.8Very low39Very low187 Ų187131.7 Ų131.781%0.81377%0.769SS**  99.5123.6128.8-80.9166.6-174.21680120.4
39K43.8Very low38.7Very low168 Ų168132 Ų13273%0.7377%0.774SS**  trans87.1110.6136.7-78.3-165.1-179.5-179.40117.7
40K45.9Very low39Very low164 Ų164131.2 Ų131.271%0.71377%0.768SS**  86.3133.793.6-83.8-167.9177.9-170.70110.4
41K44.9Very low39.5Very low171 Ų171126.4 Ų126.474%0.74377%0.767SS**  cis-167.5135.923.7-115.2178.8-178.5-166.30106.5
42A38.8Very low39.6Very low94 Ų94125.9 Ų125.978%0.77776%0.763SS**  79.5133.9104.200000113.4
43K42.8Very low39.2Very low189 Ų189130 Ų13082%0.82277%0.769SS**  cis-173.9175.915.8178.3180168.9-178.40106.8
44V39.4Very low39.8Very low109 Ų109133.3 Ų133.366%0.66177%0.772SS**  trans103.4114.7150.8178.10000113.9
45E33.2Very low40Very low164 Ų164134 Ų13477%0.76677%0.768SS**  cis-1581602.9-43.3-149.8101.900111.5
46H38.8Very low40.8Very low201 Ų201134.1 Ų134.193%0.93177%0.769SS**  trans48.4127.7153.1-96.7-9.1000120.9
47G32Very low41.3Very low71 Ų71134.7 Ų134.773%0.73276%0.764SS**  cis-176.7142.34.200000105.5
48G33.7Very low42Very low80 Ų80138.9 Ų138.983%0.82577%0.773SS**  10398.4102.400000111.1
49S46.5Very low42.4Very low125 Ų125136.7 Ų136.787%0.87477%0.77SS**  trans-26.6135.6164.8-540000115.8
50S41.3Very low42.8Very low107 Ų107133.1 Ų133.175%0.74876%0.759SS**  -159.7105.8129.2-165.60000109.8S52S50-S52 PolarHBondContact O-N 3.29Å; S50-S52 VanDerWaalsContact O-N 3.16Å
51G47.4Very low43Very low79 Ų79127.4 Ų127.481%0.81475%0.747SS**  trans-65.2107.8158.300000107.6K53G51-K53 PolarHBondContact O-N 3.19Å
52S42.4Very low43.3Very low105 Ų105124 Ų12473%0.73474%0.744SS**  trans-91.297170-1380000108.5S50 Q54S50-S52 PolarHBondContact O-N 3.29Å; S50-S52 VanDerWaalsContact O-N 3.16Å; S52-Q54 VanDerWaalsContact C-N 3.29Å; S52-Q54 PolarHBondContact O-N 3.03Å
53K49.2Very low44.2Very low206 Ų206126.4 Ų126.490%0.89674%0.737SS**  trans-60.397153-72.9178.3175.6177.40106.4G51 N55G51-K53 PolarHBondContact O-N 3.19Å; K53-N55 PolarHBondContact O-N 2.71Å
54Q43.3Very low44.9Very low180 Ų180123.3 Ų123.384%0.84173%0.73SS**  trans-92.794.7164.6-156.6164.511.600108.8S52S52-Q54 VanDerWaalsContact C-N 3.29Å; S52-Q54 PolarHBondContact O-N 3.03Å
55N36.5Very low45.7Very low116 Ų116122 Ų12262%0.6272%0.718SS**  trans5.7122145.9-159.123.4000116.1K53 D57K53-N55 PolarHBondContact O-N 2.71Å; N55-D57 PolarHBondContact O-N 3.49Å; N55-D57 VanDerWaalsContact O-N 3.08Å
56S47.4Very low46.8Very low106 Ų106124 Ų12474%0.74173%0.725SS**  trans-52102.6157.142.10000111
57D42.3Very low47.5Very low110 Ų110118.4 Ų118.459%0.58871%0.713SS**  trans-155.199.8152.6-93-56.1000110.5N55 N59N55-D57 PolarHBondContact O-N 3.49Å; N55-D57 VanDerWaalsContact O-N 3.08Å; D57-N59 PolarHBondContact O-N 3.2Å
58H53Low48.6Very low185 Ų185120.3 Ų120.386%0.85671%0.706SS**  trans46.836.7142.4-55.989.7000119.6N60H58-N60 VanDerWaalsContact C-N 3.34Å; H58-N60 PolarHBondContact O-N 2.94Å
59N48.2Very low49.2Very low141 Ų141122.7 Ų122.775%0.75471%0.71SS**  trans-83.782.3174.4-142.9-55.8000111.1D57 G61D57-N59 PolarHBondContact O-N 3.2Å; N59-G61 PolarHBondContact O-N 3.1Å; N59-G61 VanDerWaalsContact O-N 3.09Å
60N52.9Low49.7Very low92 Ų92118.8 Ų118.849%0.49269%0.69SS.*  trans-60.1104.7165-171.3-87.5000108.9H58H58-N60 VanDerWaalsContact C-N 3.34Å; H58-N60 PolarHBondContact O-N 2.94Å
61G49.6Very low50.6Low45 Ų45119 Ų11946%0.46469%0.691SS.*  trans4690.3159.800000115.6N59 F63N59-G61 PolarHBondContact O-N 3.1Å; N59-G61 VanDerWaalsContact O-N 3.09Å; G61-F63 VanDerWaalsContact C-N 3.28Å; G61-F63 WeakPolarHBondContact O-CD2 3.4Å; G61-F63 PolarHBondContact O-N 3.06Å
62S50.1Low51.5Low98 Ų98118 Ų11869%0.68567%0.672SS**  trans-61.591164.8-176.90000109.8N64S62-N64 PolarHBondContact O-N 3.07Å
63F58.8Low53.3Low146 Ų146113.7 Ų113.764%0.6464%0.644SS**  trans-69.6108.8169.5-69.2-81.3000107.5G61 L65G61-F63 VanDerWaalsContact C-N 3.28Å; G61-F63 WeakPolarHBondContact O-CD2 3.4Å; G61-F63 PolarHBondContact O-N 3.06Å; F63-L65 HydrophobicContact CB-CD1 3.92Å; F63-L65 HydrophobicContact CB-CG 4.46Å; F63-L65 PolarHBondContact O-N 2.91Å
64N56.9Low55Low124 Ų124108.9 Ų108.966%0.66362%0.621SS**  trans-72.672.2178-117.5-79.6000110.5S62 K66S62-N64 PolarHBondContact O-N 3.07Å; N64-K66 PolarHBondContact O-N 3.45Å
65L57Low57.1Low80 Ų80103.3 Ų103.342%0.41959%0.594SS.*G310 helixtrans-67.8-11.9-178.8-82.3129.3000114F63 A67F63-L65 HydrophobicContact CB-CD1 3.92Å; F63-L65 HydrophobicContact CB-CG 4.46Å; F63-L65 PolarHBondContact O-N 2.91Å; L65-A67 PolarHBondContact O-N 3.34Å
66K56Low59.6Low206 Ų206103 Ų10390%0.89659%0.587SS**G310 helixtrans-70.1-12.8179.8-77.2177.3177.2161.40114.1N64N64-K66 PolarHBondContact O-N 3.45Å
67A53.1Low61.6Low84 Ų8499 Ų9969%0.69456%0.562SS**G310 helixtrans-90.8-8.7-177.100000114.8L65 S69L65-A67 PolarHBondContact O-N 3.34Å; A67-S69 PolarHBondContact O-N 3.48Å
68L55.1Low64Low111 Ų11193.8 Ų93.858%0.58153%0.534SS*.  trans-103.174.4-176.2-60.1174.3000110.2G70L68-G70 PolarHBondContact O-N 3.44Å
69S45.6Very low65.8Low131 Ų13186.7 Ų86.792%0.91650%0.503SS*.  trans-71.794.9173.7-168.70000109.9A67A67-S69 PolarHBondContact O-N 3.48Å
70G57.9Low67.9Low43 Ų4381.9 Ų81.944%0.44348%0.482SS..SBendtrans-179.3147.6175.200000109.4L68 S72 G73L68-G70 PolarHBondContact O-N 3.44Å; G70-S72 PolarHBondContact O-N 2.9Å; G70-G73 PolarHBondContact O-N 3.22Å
71S59.4Low69.9Low110 Ų11082.4 Ų82.477%0.76948%0.48SS*.THydrogen-bonded Turntrans-51.5-21.9-178.3177.20000114G73S71-G73 VanDerWaalsContact C-N 3.33Å; S71-G73 PolarHBondContact O-N 2.93Å
72S67.8Low72Confident60 Ų6080.3 Ų80.342%0.4246%0.458SS..Hα-helixtrans-66.4-25.7174.157.10000114.5G70 Y74 K75 F76G70-S72 PolarHBondContact O-N 2.9Å; S72-Y74 PolarHBondContact O-N 3.39Å; S72-K75 PolarHBondContact O-N 3Å; S72-K75 VanDerWaalsContact O-N 3.1Å; S72-F76 WeakPolarHBondContact O-CD2 3.34Å; S72-F76 PolarHBondContact O-N 3.33Å
73G78.6Confident74Confident14 Ų1479.5 Ų79.514%0.14445%0.449CS..Hα-helixtrans-58.5-34.7-179.500000112.7G70 S71 G77G70-G73 PolarHBondContact O-N 3.22Å; S71-G73 VanDerWaalsContact C-N 3.33Å; S71-G73 PolarHBondContact O-N 2.93Å; G73-G77 PolarHBondContact O-N 3.39Å
74Y85.8Confident75.7Confident104 Ų10475.9 Ų75.941%0.40844%0.436SS..Hα-helixtrans-66.2-48.4174.4179.4-104.7000111.9S72 F76 G77 V78 I112 Q116S72-Y74 PolarHBondContact O-N 3.39Å; Y74-F76 VanDerWaalsContact C-N 3.33Å; Y74-F76 PolarHBondContact O-N 3.42Å; Y74-G77 PolarHBondContact O-N 2.81Å; Y74-V78 HydrophobicContact CD1-CG2 4.39Å; Y74-V78 HydrophobicContact CD2-CG2 4.37Å; Y74-V78 HydrophobicContact CE1-CG2 4.02Å; Y74-V78 HydrophobicContact CE2-CG2 4.01Å; Y74-V78 VanDerWaalsContact O-CG2 3.31Å; Y74-V78 WeakPolarHBondContact O-CG2 3.33Å; Y74-V78 PolarHBondContact O-N 3.15Å; Y74-I112 HydrophobicContact CE1-CG1 4.49Å; Y74-Q116 HydrophobicContact CD1-CG 4.35Å; Y74-Q116 HydrophobicContact CE1-CG 4.25Å
75K86.7Confident77.5Confident64 Ų6472.3 Ų72.328%0.27841%0.414SS..Hα-helixtrans-58.1-45.2178.9-67.2-170.9175.8-167.90111.9S72 L79 Q116 W119S72-K75 PolarHBondContact O-N 3Å; S72-K75 VanDerWaalsContact O-N 3.1Å; K75-L79 WeakPolarHBondContact O-CB 3.49Å; K75-L79 PolarHBondContact O-N 3.14Å; K75-Q116 HydrophobicContact CG-CG 4.17Å; K75-W119 HydrophobicContact CB-CE3 4.26Å; K75-W119 HydrophobicContact CB-CH2 4.25Å; K75-W119 HydrophobicContact CB-CZ3 3.9Å; K75-W119 HydrophobicContact CD-CD2 4.08Å; K75-W119 HydrophobicContact CD-CE3 4.12Å; K75-W119 HydrophobicContact CD-CZ3 4.46Å; K75-W119 HydrophobicContact CG-CE3 4.45Å
76F89.6Confident79.3Confident110 Ų11072.2 Ų72.248%0.48241%0.412SS..Hα-helixtrans-71.2-35.3178.8-70.9-64.5000112.6S72 Y74 L79 A80S72-F76 WeakPolarHBondContact O-CD2 3.34Å; S72-F76 PolarHBondContact O-N 3.33Å; Y74-F76 VanDerWaalsContact C-N 3.33Å; Y74-F76 PolarHBondContact O-N 3.42Å; F76-L79 PolarHBondContact O-N 2.82Å; F76-A80 VanDerWaalsContact O-CB 3.29Å; F76-A80 WeakPolarHBondContact O-CB 3.47Å; F76-A80 PolarHBondContact O-N 3.03Å
77G90.1Very high81.1Confident20 Ų2067.1 Ų67.121%0.20639%0.39CS..Hα-helixtrans-62.1-45173.500000112.5G73 Y74 A80 K81G73-G77 PolarHBondContact O-N 3.39Å; Y74-G77 PolarHBondContact O-N 2.81Å; G77-A80 PolarHBondContact O-N 2.77Å; G77-K81 PolarHBondContact O-N 3.12Å; G77-K81 VanDerWaalsContact O-N 3.12Å
78V91.3Very high83Confident2 Ų265.5 Ų65.51%0.01237%0.372CS..Hα-helixtrans-60.8-51174.5175.40000110.5Y74 A80 K81 I82 I112 L120Y74-V78 HydrophobicContact CD1-CG2 4.39Å; Y74-V78 HydrophobicContact CD2-CG2 4.37Å; Y74-V78 HydrophobicContact CE1-CG2 4.02Å; Y74-V78 HydrophobicContact CE2-CG2 4.01Å; Y74-V78 VanDerWaalsContact O-CG2 3.31Å; Y74-V78 WeakPolarHBondContact O-CG2 3.33Å; Y74-V78 PolarHBondContact O-N 3.15Å; V78-A80 VanDerWaalsContact C-N 3.33Å; V78-A80 PolarHBondContact O-N 2.83Å; V78-K81 PolarHBondContact O-N 3.18Å; V78-K81 VanDerWaalsContact O-N 3.12Å; V78-I82 HydrophobicContact CG1-CD1 3.79Å; V78-I82 HydrophobicContact CG1-CG1 4.36Å; V78-I82 WeakPolarHBondContact O-CG1 3.25Å; V78-I82 PolarHBondContact O-N 3.32Å; V78-I112 HydrophobicContact CG1-CD1 3.81Å; V78-I112 HydrophobicContact CG2-CD1 4.38Å; V78-L120 HydrophobicContact CG1-CD1 4.14Å
79L92.5Very high84.9Confident36 Ų3661.6 Ų61.619%0.18835%0.349CS..Hα-helixtrans-58.5-45-179.9-178.762.5000111.8K75 F76 K81 I82 V83 W119 L120 A124 L125K75-L79 WeakPolarHBondContact O-CB 3.49Å; K75-L79 PolarHBondContact O-N 3.14Å; F76-L79 PolarHBondContact O-N 2.82Å; L79-K81 VanDerWaalsContact C-N 3.26Å; L79-K81 PolarHBondContact O-N 3.16Å; L79-I82 PolarHBondContact O-N 2.9Å; L79-V83 HydrophobicContact CD1-CG2 4.16Å; L79-V83 HydrophobicContact CG-CG2 4.36Å; L79-V83 VanDerWaalsContact O-CG2 3.31Å; L79-V83 WeakPolarHBondContact O-CG2 3.48Å; L79-V83 PolarHBondContact O-N 3.36Å; L79-W119 HydrophobicContact CD2-CH2 4.18Å; L79-L120 HydrophobicContact CD1-CD2 4.22Å; L79-A124 HydrophobicContact CD1-CB 4.04Å; L79-A124 HydrophobicContact CD2-CB 4.36Å; L79-L125 HydrophobicContact CD1-CD2 4.44Å
80A92.1Very high87.2Confident39 Ų3961.2 Ų61.232%0.32233%0.333SS..Hα-helixtrans-58.7-40.7177.800000111.8F76 G77 V78 N84F76-A80 VanDerWaalsContact O-CB 3.29Å; F76-A80 WeakPolarHBondContact O-CB 3.47Å; F76-A80 PolarHBondContact O-N 3.03Å; G77-A80 PolarHBondContact O-N 2.77Å; V78-A80 VanDerWaalsContact C-N 3.33Å; V78-A80 PolarHBondContact O-N 2.83Å; A80-N84 VanDerWaalsContact O-CB 3.31Å; A80-N84 WeakPolarHBondContact O-CB 3.09Å; A80-N84 PolarHBondContact O-N 3.03Å
81K93.3Very high88.9Confident104 Ų10465.9 Ų65.945%0.45234%0.343SS..Hα-helixtrans-68.9-41.4178.1-171.7144.6164.1178.60112.1G77 V78 L79 N84 Y85 T107G77-K81 PolarHBondContact O-N 3.12Å; G77-K81 VanDerWaalsContact O-N 3.12Å; V78-K81 PolarHBondContact O-N 3.18Å; V78-K81 VanDerWaalsContact O-N 3.12Å; L79-K81 VanDerWaalsContact C-N 3.26Å; L79-K81 PolarHBondContact O-N 3.16Å; K81-N84 PolarHBondContact O-N 3.42Å; K81-Y85 WeakPolarHBondContact O-CB 3.39Å; K81-Y85 PolarHBondContact O-N 3.32Å; K81-T107 WeakPolarHBondContact CE-O 3.38Å; K81-T107 HydrophobicContact CG-CG2 4.32Å
82I93.5Very high90.5Very high0 Ų070 Ų700%034%0.342CS..Hα-helixtrans-58.1-52.3173-70.2172.7000110.7V78 L79 N84 Y85 M86 I103 L104 L120 L125V78-I82 HydrophobicContact CG1-CD1 3.79Å; V78-I82 HydrophobicContact CG1-CG1 4.36Å; V78-I82 WeakPolarHBondContact O-CG1 3.25Å; V78-I82 PolarHBondContact O-N 3.32Å; L79-I82 PolarHBondContact O-N 2.9Å; I82-N84 VanDerWaalsContact C-N 3.32Å; I82-N84 PolarHBondContact O-N 3.11Å; I82-Y85 PolarHBondContact O-N 3.07Å; I82-M86 HydrophobicContact CG2-CG 4.45Å; I82-M86 WeakPolarHBondContact O-CG 3.42Å; I82-M86 PolarHBondContact O-N 3.48Å; I82-I103 HydrophobicContact CB-CG2 4.23Å; I82-I103 HydrophobicContact CD1-CG2 4.47Å; I82-I103 HydrophobicContact CG1-CG2 3.85Å; I82-I103 HydrophobicContact CG2-CG2 3.78Å; I82-L104 HydrophobicContact CD1-CD2 4.25Å; I82-L120 HydrophobicContact CD1-CD1 3.89Å; I82-L120 HydrophobicContact CD1-CD2 4.08Å; I82-L125 HydrophobicContact CG2-CD2 4.37Å
83V93.9Very high91.7Very high82 Ų8269.7 Ų69.750%0.49735%0.348SS..Hα-helixtrans-60.7-43.2-179.2172.20000110.9L79 M86 K87L79-V83 HydrophobicContact CD1-CG2 4.16Å; L79-V83 HydrophobicContact CG-CG2 4.36Å; L79-V83 VanDerWaalsContact O-CG2 3.31Å; L79-V83 WeakPolarHBondContact O-CG2 3.48Å; L79-V83 PolarHBondContact O-N 3.36Å; V83-M86 PolarHBondContact O-N 3.13Å; V83-K87 VanDerWaalsContact O-CB 3.27Å; V83-K87 WeakPolarHBondContact O-CB 3.27Å; V83-K87 PolarHBondContact O-N 3.36Å
84N94.4Very high92.1Very high69 Ų6973.1 Ų73.137%0.36936%0.363SS..Hα-helixtrans-65-40.3178.3-172.755.1000112.5A80 K81 I82 T88A80-N84 VanDerWaalsContact O-CB 3.31Å; A80-N84 WeakPolarHBondContact O-CB 3.09Å; A80-N84 PolarHBondContact O-N 3.03Å; K81-N84 PolarHBondContact O-N 3.42Å; I82-N84 VanDerWaalsContact C-N 3.32Å; I82-N84 PolarHBondContact O-N 3.11Å; N84-T88 WeakPolarHBondContact O-CB 3.46Å; N84-T88 PolarHBondContact O-N 2.99Å; N84-T88 PolarHBondContact O-OG1 3.12Å
85Y94.5Very high92.3Very high49 Ų4972.9 Ų72.919%0.19237%0.372CS..Hα-helixtrans-61.7-52.8174.4172.4-98.1000111K81 I82 K87 T88 R89 L98 I103 E106 T107K81-Y85 WeakPolarHBondContact O-CB 3.39Å; K81-Y85 PolarHBondContact O-N 3.32Å; I82-Y85 PolarHBondContact O-N 3.07Å; Y85-K87 VanDerWaalsContact C-N 3.31Å; Y85-K87 PolarHBondContact O-N 3.02Å; Y85-T88 PolarHBondContact O-N 3.27Å; Y85-T88 VanDerWaalsContact O-N 3.15Å; Y85-R89 WeakPolarHBondContact O-CB 3.27Å; Y85-R89 PolarHBondContact O-N 2.87Å; Y85-R89 PolarHBondContact OH-NE 2.95Å; Y85-L98 HydrophobicContact CE1-CD1 3.76Å; Y85-I103 HydrophobicContact CD1-CG2 4.43Å; Y85-E106 HydrophobicContact CE1-CB 4.23Å; Y85-E106 HydrophobicContact CE2-CB 3.87Å; Y85-E106 HydrophobicContact CE2-CG 4.42Å; Y85-E106 WeakPolarHBondContact OH-CG 3.36Å; Y85-T107 HydrophobicContact CD1-CG2 4.44Å; Y85-T107 HydrophobicContact CG-CG2 4.05Å
86M93.9Very high92.6Very high78 Ų7874.4 Ų74.438%0.38438%0.38SS..Hα-helixtrans-58.7-42.5179.6-70.4-152.978.500112.1I82 V83 H90 I103I82-M86 HydrophobicContact CG2-CG 4.45Å; I82-M86 WeakPolarHBondContact O-CG 3.42Å; I82-M86 PolarHBondContact O-N 3.48Å; V83-M86 PolarHBondContact O-N 3.13Å; M86-H90 VanDerWaalsContact O-CB 3.26Å; M86-H90 WeakPolarHBondContact O-CB 3.41Å; M86-H90 PolarHBondContact O-N 2.89Å; M86-I103 HydrophobicContact CE-CD1 4.32Å; M86-I103 HydrophobicContact CG-CD1 4.35Å; M86-I103 HydrophobicContact SD-CD1 3.87Å
87K93.6Very high92.5Very high99 Ų9975 Ų7543%0.4340%0.395SS..Hα-helixtrans-60.2-48.8175.3180-178176.8-177.20111.9V83 Y85 H90 Q91V83-K87 VanDerWaalsContact O-CB 3.27Å; V83-K87 WeakPolarHBondContact O-CB 3.27Å; V83-K87 PolarHBondContact O-N 3.36Å; Y85-K87 VanDerWaalsContact C-N 3.31Å; Y85-K87 PolarHBondContact O-N 3.02Å; K87-H90 PolarHBondContact O-N 3.23Å; K87-Q91 WeakPolarHBondContact O-CB 3.28Å; K87-Q91 VanDerWaalsContact O-CG 3.28Å; K87-Q91 WeakPolarHBondContact O-CG 3.4Å; K87-Q91 PolarHBondContact O-N 3.38Å
88T93.8Very high92.6Very high51 Ų5175.5 Ų75.531%0.31339%0.393SS..Hα-helixtrans-64-44.8-177.1-590000111.3N84 Y85 Q91 R92N84-T88 WeakPolarHBondContact O-CB 3.46Å; N84-T88 PolarHBondContact O-N 2.99Å; N84-T88 PolarHBondContact O-OG1 3.12Å; Y85-T88 PolarHBondContact O-N 3.27Å; Y85-T88 VanDerWaalsContact O-N 3.15Å; T88-Q91 PolarHBondContact O-N 3.44Å; T88-R92 WeakPolarHBondContact O-CG 3.43Å; T88-R92 PolarHBondContact O-N 3.12Å; T88-R92 VanDerWaalsContact O-N 3.11Å
89R94.1Very high92.6Very high29 Ų2979.2 Ų79.211%0.10942%0.416CS..Hα-helixtrans-58.1-49.5174155.7177.5-99.8-104.13111.8Y85 Q91 R92 G93 D94 H96Y85-R89 WeakPolarHBondContact O-CB 3.27Å; Y85-R89 PolarHBondContact O-N 2.87Å; Y85-R89 PolarHBondContact OH-NE 2.95Å; R89-Q91 VanDerWaalsContact C-N 3.3Å; R89-Q91 PolarHBondContact O-N 2.94Å; R89-R92 WeakPolarHBondContact O-CB 3.41Å; R89-R92 PolarHBondContact O-N 3.4Å; R89-G93 PolarHBondContact O-N 3.38Å; R89-D94 HydrophobicContact CG-CB 3.76Å; R89-D94 WeakPolarHBondContact CG-O 3.46Å; R89-D94 PolarHBondContact O-N 2.97Å; R89-H96 VanDerWaalsContact CZ-NE2 3.31Å; R89-H96 PolarHBondContact NH1-CD2 2.88Å; R89-H96 PolarHBondContact NH1-CE1 3.48Å; R89-H96 PolarHBondContact NH1-ND1 2.98Å; R89-H96 PolarHBondContact NH1-NE2 2.91Å; R89-H96 PolarHBondContact NH1-O 3.48Å; R89-H96 PolarHBondContact NH2-CE1 2.91Å; R89-H96 PolarHBondContact NH2-NE2 3.08Å
90H94.5Very high92.4Very high123 Ų12378.3 Ų78.357%0.56941%0.411SS*.Hα-helixtrans-61.2-40.1178.8-171.686.7000111.9M86 K87 R92 G93M86-H90 VanDerWaalsContact O-CB 3.26Å; M86-H90 WeakPolarHBondContact O-CB 3.41Å; M86-H90 PolarHBondContact O-N 2.89Å; K87-H90 PolarHBondContact O-N 3.23Å; H90-R92 VanDerWaalsContact C-N 3.26Å; H90-R92 PolarHBondContact O-N 3.33Å; H90-G93 PolarHBondContact O-N 3.24Å; H90-G93 VanDerWaalsContact O-N 3.16Å
91Q94.2Very high92.2Very high140 Ų14082.1 Ų82.165%0.65442%0.422SS*.Hα-helixtrans-67.1-24.7176.1-73.5-179.4-6.900113.7K87 T88 R89 G93K87-Q91 WeakPolarHBondContact O-CB 3.28Å; K87-Q91 VanDerWaalsContact O-CG 3.28Å; K87-Q91 WeakPolarHBondContact O-CG 3.4Å; K87-Q91 PolarHBondContact O-N 3.38Å; T88-Q91 PolarHBondContact O-N 3.44Å; R89-Q91 VanDerWaalsContact C-N 3.3Å; R89-Q91 PolarHBondContact O-N 2.94Å; Q91-G93 VanDerWaalsContact C-N 3.27Å
92R92.3Very high92.2Very high198 Ų19881.5 Ų81.575%0.74742%0.421SS*.Hα-helixtrans-80.2-8175.1-71.8173.1-178.8-100.71113.3T88 R89 H90T88-R92 WeakPolarHBondContact O-CG 3.43Å; T88-R92 PolarHBondContact O-N 3.12Å; T88-R92 VanDerWaalsContact O-N 3.11Å; R89-R92 WeakPolarHBondContact O-CB 3.41Å; R89-R92 PolarHBondContact O-N 3.4Å; H90-R92 VanDerWaalsContact C-N 3.26Å; H90-R92 PolarHBondContact O-N 3.33Å
93G92.6Very high92.1Very high53 Ų5381.7 Ų81.755%0.54642%0.422SS..THydrogen-bonded Turntrans98.3-2.8-178.600000114.2R89 H90 Q91 T95R89-G93 PolarHBondContact O-N 3.38Å; H90-G93 PolarHBondContact O-N 3.24Å; H90-G93 VanDerWaalsContact O-N 3.16Å; Q91-G93 VanDerWaalsContact C-N 3.27Å; G93-T95 PolarHBondContact O-N 3.12Å
94D88.5Confident92Very high86 Ų8678.2 Ų78.246%0.4640%0.4SS..  trans-82.984.5177.1-72.5-36000110R89R89-D94 HydrophobicContact CG-CB 3.76Å; R89-D94 WeakPolarHBondContact CG-O 3.46Å; R89-D94 PolarHBondContact O-N 2.97Å
95T89.3Confident91.9Very high98 Ų9879.4 Ų79.460%0.60141%0.407SS*.  trans-97.48.4-175.761.10000113.7G93G93-T95 PolarHBondContact O-N 3.12Å
96H91.9Very high91.7Very high96 Ų9682.5 Ų82.544%0.44442%0.423SS..  trans-66.3139.5177.466.9-94.9000110.9R89R89-H96 VanDerWaalsContact CZ-NE2 3.31Å; R89-H96 PolarHBondContact NH1-CD2 2.88Å; R89-H96 PolarHBondContact NH1-CE1 3.48Å; R89-H96 PolarHBondContact NH1-ND1 2.98Å; R89-H96 PolarHBondContact NH1-NE2 2.91Å; R89-H96 PolarHBondContact NH1-O 3.48Å; R89-H96 PolarHBondContact NH2-CE1 2.91Å; R89-H96 PolarHBondContact NH2-NE2 3.08Å
97P89.3Confident91.5Very high123 Ų12379 Ų7980%0.79941%0.406SS*.  trans-63.6140176.628.4-34.3000109.5
98L91.1Very high91.2Very high30 Ų3082.2 Ų82.216%0.15742%0.423CS..  trans-115144.2172-71.9174.7000109.5Y85 E102 I103Y85-L98 HydrophobicContact CE1-CD1 3.76Å; L98-E102 HydrophobicContact CB-CB 4.46Å; L98-E102 HydrophobicContact CD2-CB 3.99Å; L98-I103 HydrophobicContact CB-CD1 4.05Å; L98-I103 HydrophobicContact CB-CG1 3.71Å; L98-I103 HydrophobicContact CD1-CG1 3.88Å
99T91.3Very high90.8Very high80 Ų8081.4 Ų81.449%0.49142%0.415SS..  trans-71.115916766.40000110.3E101 E102 I103T99-E101 PolarHBondContact O-N 3.08Å; T99-E102 WeakPolarHBondContact CB-OE2 3.29Å; T99-E102 WeakPolarHBondContact CG2-OE2 3.47Å; T99-E102 PolarHBondContact N-OE2 2.94Å; T99-E102 PolarHBondContact O-N 3.37Å; T99-E102 VanDerWaalsContact OG1-CD 3.31Å; T99-E102 VanDerWaalsContact OG1-CG 3.31Å; T99-E102 WeakPolarHBondContact OG1-CG 3.4Å; T99-E102 PolarHBondContact OG1-N 3.45Å; T99-E102 PolarHBondContact OG1-OE2 2.92Å; T99-I103 WeakPolarHBondContact O-CG1 3.46Å; T99-I103 PolarHBondContact O-N 2.98Å
100L88.9Confident90.1Very high18 Ų1885.9 Ų85.99%0.09444%0.441CS..Hα-helixtrans-60.1-34.3177.3-178.259.4000111.9I103 L104 K117 L120 M121 L125L100-I103 PolarHBondContact O-N 3.46Å; L100-L104 HydrophobicContact CD1-CD1 4.25Å; L100-L104 HydrophobicContact CD1-CG 4.14Å; L100-L104 HydrophobicContact CD2-CD1 4.4Å; L100-L104 HydrophobicContact CG-CD1 3.85Å; L100-L104 HydrophobicContact CG-CG 4.23Å; L100-L104 WeakPolarHBondContact O-CB 3.4Å; L100-L104 WeakPolarHBondContact O-CG 3.34Å; L100-L104 PolarHBondContact O-N 3.23Å; L100-K117 HydrophobicContact CD2-CG 4.08Å; L100-L120 HydrophobicContact CD1-CB 4.39Å; L100-L120 HydrophobicContact CD1-CD1 4.41Å; L100-L120 HydrophobicContact CD2-CB 3.94Å; L100-M121 HydrophobicContact CB-CE 3.98Å; L100-M121 HydrophobicContact CD2-CB 4.46Å; L100-M121 HydrophobicContact CD2-CE 3.76Å; L100-M121 HydrophobicContact CD2-CG 3.27Å; L100-M121 HydrophobicContact CD2-SD 4.28Å; L100-M121 HydrophobicContact CG-CE 4.38Å; L100-L125 HydrophobicContact CD1-CD1 3.68Å
101E88.1Confident89.6Confident119 Ų11987.7 Ų87.756%0.55645%0.454SS*.Hα-helixtrans-67.3-43.4-179.1-64.5-170.8166.500112T99 I103 L104 D105 K117T99-E101 PolarHBondContact O-N 3.08Å; E101-I103 VanDerWaalsContact C-N 3.33Å; E101-I103 PolarHBondContact O-N 3.05Å; E101-L104 PolarHBondContact O-N 3.02Å; E101-D105 PolarHBondContact O-N 2.78Å; E101-K117 IonicContact OE1-NZ 2.66Å; E101-K117 PolarHBondContact OE1-NZ 3.19Å
102E91.9Very high89.2Confident90 Ų9082 Ų8242%0.42143%0.428SS..Hα-helixtrans-61.7-41.7175.7-68.4163.3131.100111.5L98 T99 L104 D105 E106L98-E102 HydrophobicContact CB-CB 4.46Å; L98-E102 HydrophobicContact CD2-CB 3.99Å; T99-E102 WeakPolarHBondContact CB-OE2 3.29Å; T99-E102 WeakPolarHBondContact CG2-OE2 3.47Å; T99-E102 PolarHBondContact N-OE2 2.94Å; T99-E102 PolarHBondContact O-N 3.37Å; T99-E102 VanDerWaalsContact OG1-CD 3.31Å; T99-E102 VanDerWaalsContact OG1-CG 3.31Å; T99-E102 WeakPolarHBondContact OG1-CG 3.4Å; T99-E102 PolarHBondContact OG1-N 3.45Å; T99-E102 PolarHBondContact OG1-OE2 2.92Å; E102-L104 VanDerWaalsContact C-N 3.33Å; E102-L104 PolarHBondContact O-N 2.89Å; E102-D105 PolarHBondContact O-N 3.09Å; E102-E106 WeakPolarHBondContact O-CB 3.33Å; E102-E106 VanDerWaalsContact O-CG 3.26Å; E102-E106 WeakPolarHBondContact O-CG 3.39Å; E102-E106 PolarHBondContact O-N 3.1Å
103I91.9Very high89Confident5 Ų574 Ų743%0.02641%0.408CS..Hα-helixtrans-63.5-40.7176.3-64.3169.3000110.9I82 Y85 M86 L98 T99 L100 E101 T107I82-I103 HydrophobicContact CB-CG2 4.23Å; I82-I103 HydrophobicContact CD1-CG2 4.47Å; I82-I103 HydrophobicContact CG1-CG2 3.85Å; I82-I103 HydrophobicContact CG2-CG2 3.78Å; Y85-I103 HydrophobicContact CD1-CG2 4.43Å; M86-I103 HydrophobicContact CE-CD1 4.32Å; M86-I103 HydrophobicContact CG-CD1 4.35Å; M86-I103 HydrophobicContact SD-CD1 3.87Å; L98-I103 HydrophobicContact CB-CD1 4.05Å; L98-I103 HydrophobicContact CB-CG1 3.71Å; L98-I103 HydrophobicContact CD1-CG1 3.88Å; T99-I103 WeakPolarHBondContact O-CG1 3.46Å; T99-I103 PolarHBondContact O-N 2.98Å; L100-I103 PolarHBondContact O-N 3.46Å; E101-I103 VanDerWaalsContact C-N 3.33Å; E101-I103 PolarHBondContact O-N 3.05Å; I103-T107 HydrophobicContact CG2-CG2 4.34Å; I103-T107 WeakPolarHBondContact O-CB 3.47Å; I103-T107 VanDerWaalsContact O-CG2 3.25Å; I103-T107 WeakPolarHBondContact O-CG2 3.48Å; I103-T107 PolarHBondContact O-N 3.2Å; I103-T107 PolarHBondContact O-OG1 3.36Å
104L91.6Very high88.8Confident8 Ų878.3 Ų78.34%0.04242%0.418CS..Hα-helixtrans-69-34.7179.4-71.4171000112.1I82 L100 E101 E102 T107 Q108 H109 I112 L120I82-L104 HydrophobicContact CD1-CD2 4.25Å; L100-L104 HydrophobicContact CD1-CD1 4.25Å; L100-L104 HydrophobicContact CD1-CG 4.14Å; L100-L104 HydrophobicContact CD2-CD1 4.4Å; L100-L104 HydrophobicContact CG-CD1 3.85Å; L100-L104 HydrophobicContact CG-CG 4.23Å; L100-L104 WeakPolarHBondContact O-CB 3.4Å; L100-L104 WeakPolarHBondContact O-CG 3.34Å; L100-L104 PolarHBondContact O-N 3.23Å; E101-L104 PolarHBondContact O-N 3.02Å; E102-L104 VanDerWaalsContact C-N 3.33Å; E102-L104 PolarHBondContact O-N 2.89Å; L104-T107 PolarHBondContact O-OG1 2.94Å; L104-Q108 PolarHBondContact O-N 3.07Å; L104-H109 HydrophobicContact CD2-CB 3.91Å; L104-H109 PolarHBondContact O-N 2.92Å; L104-I112 HydrophobicContact CD1-CG2 3.74Å; L104-I112 HydrophobicContact CD2-CD1 4.11Å; L104-I112 HydrophobicContact CD2-CG2 4.13Å; L104-L120 HydrophobicContact CD2-CD1 4.36Å
105D91.6Very high88.8Confident95 Ų9582.6 Ų82.651%0.50843%0.432SS..Hα-helixtrans-64.9-52.9174.3-168.541.5000111E101 E102 T107 Q108 L110E101-D105 PolarHBondContact O-N 2.78Å; E102-D105 PolarHBondContact O-N 3.09Å; D105-T107 VanDerWaalsContact C-N 3.3Å; D105-T107 PolarHBondContact O-N 3.38Å; D105-Q108 WeakPolarHBondContact O-CA 3.31Å; D105-Q108 PolarHBondContact O-N 3.04Å; D105-L110 HydrophobicContact CB-CD2 4.48Å
106E91.4Very high88.8Confident114 Ų11480.2 Ų80.253%0.53341%0.414SS..Hα-helixtrans-61-36.2178.8-72.2-79.8-167.300113Y85 E102 Q108Y85-E106 HydrophobicContact CE1-CB 4.23Å; Y85-E106 HydrophobicContact CE2-CB 3.87Å; Y85-E106 HydrophobicContact CE2-CG 4.42Å; Y85-E106 WeakPolarHBondContact OH-CG 3.36Å; E102-E106 WeakPolarHBondContact O-CB 3.33Å; E102-E106 VanDerWaalsContact O-CG 3.26Å; E102-E106 WeakPolarHBondContact O-CG 3.39Å; E102-E106 PolarHBondContact O-N 3.1Å; E106-Q108 VanDerWaalsContact C-N 3.27Å; E106-Q108 PolarHBondContact O-N 3.02Å
107T89.8Confident88.6Confident5 Ų578 Ų783%0.03140%0.404CS..THydrogen-bonded Turntrans-83.90.117760.80000113.6K81 Y85 I103 L104 D105 H109K81-T107 WeakPolarHBondContact CE-O 3.38Å; K81-T107 HydrophobicContact CG-CG2 4.32Å; Y85-T107 HydrophobicContact CD1-CG2 4.44Å; Y85-T107 HydrophobicContact CG-CG2 4.05Å; I103-T107 HydrophobicContact CG2-CG2 4.34Å; I103-T107 WeakPolarHBondContact O-CB 3.47Å; I103-T107 VanDerWaalsContact O-CG2 3.25Å; I103-T107 WeakPolarHBondContact O-CG2 3.48Å; I103-T107 PolarHBondContact O-N 3.2Å; I103-T107 PolarHBondContact O-OG1 3.36Å; L104-T107 PolarHBondContact O-OG1 2.94Å; D105-T107 VanDerWaalsContact C-N 3.3Å; D105-T107 PolarHBondContact O-N 3.38Å; T107-H109 PolarHBondContact O-CE1 3.46Å; T107-H109 VanDerWaalsContact O-CE1 3.32Å; T107-H109 PolarHBondContact O-ND1 3.23Å; T107-H109 PolarHBondContact OG1-ND1 3.37Å
108Q88Confident88.7Confident165 Ų16576.8 Ų76.877%0.77139%0.387SS*.THydrogen-bonded Turntrans57.639.8-177.2-52.5-174.7-77.800113.8L104 D105 E106L104-Q108 PolarHBondContact O-N 3.07Å; D105-Q108 WeakPolarHBondContact O-CA 3.31Å; D105-Q108 PolarHBondContact O-N 3.04Å; E106-Q108 VanDerWaalsContact C-N 3.27Å; E106-Q108 PolarHBondContact O-N 3.02Å
109H84.1Confident88.8Confident35 Ų3577.3 Ų77.316%0.16239%0.387CS..  trans-111.742.8176-70.979.9000111.7L104 T107 D111 I112L104-H109 HydrophobicContact CD2-CB 3.91Å; L104-H109 PolarHBondContact O-N 2.92Å; T107-H109 PolarHBondContact O-CE1 3.46Å; T107-H109 VanDerWaalsContact O-CE1 3.32Å; T107-H109 PolarHBondContact O-ND1 3.23Å; T107-H109 PolarHBondContact OG1-ND1 3.37Å; H109-D111 VanDerWaalsContact C-N 3.27Å; H109-D111 PolarHBondContact O-N 3.22Å; H109-I112 WeakPolarHBondContact O-CB 3.31Å; H109-I112 VanDerWaalsContact O-CG2 3.27Å; H109-I112 WeakPolarHBondContact O-CG2 3.31Å; H109-I112 PolarHBondContact O-N 3.5Å
110L79.8Confident88.8Confident122 Ų12273.6 Ų73.664%0.63936%0.364SS*.THydrogen-bonded Turntrans-62.9-32.5178.4-71.8146.9000112.4D105 I112D105-L110 HydrophobicContact CB-CD2 4.48Å; L110-I112 PolarHBondContact O-N 3.41Å; L110-I112 VanDerWaalsContact O-N 3.14Å
111D83.1Confident88.8Confident161 Ų16176.8 Ų76.886%0.86138%0.379SS*.THydrogen-bonded Turntrans-82.620.7179.8-60-44.2000113.8H109 G113H109-D111 VanDerWaalsContact C-N 3.27Å; H109-D111 PolarHBondContact O-N 3.22Å; D111-G113 PolarHBondContact O-N 3.23Å
112I86.4Confident88.9Confident20 Ų2075.3 Ų75.310%0.10338%0.379CS..  trans-71.2125.1179.2-167.2162.5000110.9Y74 V78 L104 H109 L110 Q116 K117 L120Y74-I112 HydrophobicContact CE1-CG1 4.49Å; V78-I112 HydrophobicContact CG1-CD1 3.81Å; V78-I112 HydrophobicContact CG2-CD1 4.38Å; L104-I112 HydrophobicContact CD1-CG2 3.74Å; L104-I112 HydrophobicContact CD2-CD1 4.11Å; L104-I112 HydrophobicContact CD2-CG2 4.13Å; H109-I112 WeakPolarHBondContact O-CB 3.31Å; H109-I112 VanDerWaalsContact O-CG2 3.27Å; H109-I112 WeakPolarHBondContact O-CG2 3.31Å; H109-I112 PolarHBondContact O-N 3.5Å; L110-I112 PolarHBondContact O-N 3.41Å; L110-I112 VanDerWaalsContact O-N 3.14Å; I112-Q116 HydrophobicContact CD1-CB 3.88Å; I112-Q116 HydrophobicContact CG1-CB 3.53Å; I112-Q116 HydrophobicContact CG1-CG 4.5Å; I112-K117 HydrophobicContact CG2-CB 4.45Å; I112-L120 HydrophobicContact CD1-CD1 3.62Å
113G88.4Confident88.8Confident32 Ų3276.1 Ų76.133%0.3338%0.383SS..  trans-60.2148.4179.500000113D111 K115 Q116 K117D111-G113 PolarHBondContact O-N 3.23Å; G113-K115 PolarHBondContact O-N 3.46Å; G113-K115 VanDerWaalsContact O-N 3.12Å; G113-Q116 WeakPolarHBondContact O-CA 3.38Å; G113-Q116 WeakPolarHBondContact O-CB 3.39Å; G113-Q116 PolarHBondContact O-N 2.87Å; G113-Q116 PolarHBondContact O-OE1 3.27Å; G113-K117 PolarHBondContact O-N 3.23Å
114L88.5Confident88.7Confident142 Ų14276.9 Ų76.974%0.74339%0.39SS*.Hα-helixtrans-52.9-38.2-177.7-174.565.6000112.9Q116 K117 Q118L114-Q116 VanDerWaalsContact C-N 3.35Å; L114-Q116 PolarHBondContact O-N 2.89Å; L114-K117 PolarHBondContact O-N 2.8Å; L114-Q118 WeakPolarHBondContact O-CB 3.29Å; L114-Q118 PolarHBondContact O-N 3.4Å
115K88.6Confident88.4Confident177 Ų17780 Ų8077%0.7741%0.406SS*.Hα-helixtrans-64.4-38177.4-69.6-176.5178.8178.70112.4G113 W119G113-K115 PolarHBondContact O-N 3.46Å; G113-K115 VanDerWaalsContact O-N 3.12Å; K115-W119 WeakPolarHBondContact O-CB 3.12Å; K115-W119 PolarHBondContact O-N 3.2Å; K115-W119 VanDerWaalsContact O-N 3.07Å
116Q88.3Confident88Confident48 Ų4880.6 Ų80.622%0.22441%0.413CS..Hα-helixtrans-74.4-40.5177.3-68.584.5-1400111Y74 K75 I112 G113 L114 W119 L120Y74-Q116 HydrophobicContact CD1-CG 4.35Å; Y74-Q116 HydrophobicContact CE1-CG 4.25Å; K75-Q116 HydrophobicContact CG-CG 4.17Å; I112-Q116 HydrophobicContact CD1-CB 3.88Å; I112-Q116 HydrophobicContact CG1-CB 3.53Å; I112-Q116 HydrophobicContact CG1-CG 4.5Å; G113-Q116 WeakPolarHBondContact O-CA 3.38Å; G113-Q116 WeakPolarHBondContact O-CB 3.39Å; G113-Q116 PolarHBondContact O-N 2.87Å; G113-Q116 PolarHBondContact O-OE1 3.27Å; L114-Q116 VanDerWaalsContact C-N 3.35Å; L114-Q116 PolarHBondContact O-N 2.89Å; Q116-W119 PolarHBondContact O-N 3.21Å; Q116-L120 WeakPolarHBondContact O-CG 3.47Å; Q116-L120 PolarHBondContact O-N 3.49Å
117K89.1Confident86.5Confident50 Ų5084.1 Ų84.122%0.21744%0.436CS..Hα-helixtrans-58.5-47.2172.5-173.2178.2179.8178.40111.3L100 E101 I112 G113 L114 W119 L120 M121L100-K117 HydrophobicContact CD2-CG 4.08Å; E101-K117 IonicContact OE1-NZ 2.66Å; E101-K117 PolarHBondContact OE1-NZ 3.19Å; I112-K117 HydrophobicContact CG2-CB 4.45Å; G113-K117 PolarHBondContact O-N 3.23Å; L114-K117 PolarHBondContact O-N 2.8Å; K117-W119 PolarHBondContact O-N 3.45Å; K117-L120 PolarHBondContact O-N 3.28Å; K117-M121 HydrophobicContact CG-CE 4.44Å; K117-M121 WeakPolarHBondContact O-CG 3.34Å; K117-M121 PolarHBondContact O-N 3.01Å
118Q91.4Very high86.3Confident97 Ų9788.1 Ų88.145%0.45346%0.456SS..Hα-helixtrans-59.7-47.6176.8-17560.472.700111.6L114 L120 M121 T122L114-Q118 WeakPolarHBondContact O-CB 3.29Å; L114-Q118 PolarHBondContact O-N 3.4Å; Q118-L120 VanDerWaalsContact C-N 3.3Å; Q118-L120 PolarHBondContact O-N 3.16Å; Q118-M121 PolarHBondContact O-N 3.44Å; Q118-M121 VanDerWaalsContact O-N 3.1Å; Q118-T122 PolarHBondContact O-N 3.36Å; Q118-T122 PolarHBondContact O-OG1 3.2Å
119W92.6Very high86.2Confident41 Ų4184.1 Ų84.116%0.15544%0.439CS..Hα-helixtrans-57.6-41.1177.417974.5000112.7K75 L79 K115 Q116 K117 E123 A124K75-W119 HydrophobicContact CB-CE3 4.26Å; K75-W119 HydrophobicContact CB-CH2 4.25Å; K75-W119 HydrophobicContact CB-CZ3 3.9Å; K75-W119 HydrophobicContact CD-CD2 4.08Å; K75-W119 HydrophobicContact CD-CE3 4.12Å; K75-W119 HydrophobicContact CD-CZ3 4.46Å; K75-W119 HydrophobicContact CG-CE3 4.45Å; L79-W119 HydrophobicContact CD2-CH2 4.18Å; K115-W119 WeakPolarHBondContact O-CB 3.12Å; K115-W119 PolarHBondContact O-N 3.2Å; K115-W119 VanDerWaalsContact O-N 3.07Å; Q116-W119 PolarHBondContact O-N 3.21Å; K117-W119 PolarHBondContact O-N 3.45Å; W119-E123 PolarHBondContact NE1-OE2 3.29Å; W119-E123 WeakPolarHBondContact O-CA 3.16Å; W119-E123 VanDerWaalsContact O-CB 3.29Å; W119-E123 WeakPolarHBondContact O-CB 3.41Å; W119-E123 PolarHBondContact O-N 3.08Å; W119-A124 HydrophobicContact CD2-CB 4.48Å; W119-A124 HydrophobicContact CE3-CB 4.16Å; W119-A124 HydrophobicContact CH2-CB 3.89Å; W119-A124 HydrophobicContact CZ2-CB 4.21Å; W119-A124 HydrophobicContact CZ3-CB 3.86Å; W119-A124 PolarHBondContact O-N 3.18Å
120L91.4Very high86.3Confident2 Ų286.8 Ų86.81%0.0146%0.455CS..Iπ-helixtrans-62.9-43.8174.5-70.8168.8000111.8V78 L79 I82 L100 L104 I112 Q116 K117 Q118 A124 L125V78-L120 HydrophobicContact CG1-CD1 4.14Å; L79-L120 HydrophobicContact CD1-CD2 4.22Å; I82-L120 HydrophobicContact CD1-CD1 3.89Å; I82-L120 HydrophobicContact CD1-CD2 4.08Å; L100-L120 HydrophobicContact CD1-CB 4.39Å; L100-L120 HydrophobicContact CD1-CD1 4.41Å; L100-L120 HydrophobicContact CD2-CB 3.94Å; L104-L120 HydrophobicContact CD2-CD1 4.36Å; I112-L120 HydrophobicContact CD1-CD1 3.62Å; Q116-L120 WeakPolarHBondContact O-CG 3.47Å; Q116-L120 PolarHBondContact O-N 3.49Å; K117-L120 PolarHBondContact O-N 3.28Å; Q118-L120 VanDerWaalsContact C-N 3.3Å; Q118-L120 PolarHBondContact O-N 3.16Å; L120-A124 HydrophobicContact CD2-CB 3.96Å; L120-L125 HydrophobicContact CB-CD1 4.49Å; L120-L125 WeakPolarHBondContact O-CB 3.43Å; L120-L125 WeakPolarHBondContact O-CG 3.45Å; L120-L125 PolarHBondContact O-N 3.16Å
121M89.4Confident86.7Confident84 Ų8484.7 Ų84.741%0.41444%0.444SS..Iπ-helixtrans-69.9-40.1-177.9-72-173.8165.200114.3L100 K117 Q118 V126L100-M121 HydrophobicContact CB-CE 3.98Å; L100-M121 HydrophobicContact CD2-CB 4.46Å; L100-M121 HydrophobicContact CD2-CE 3.76Å; L100-M121 HydrophobicContact CD2-CG 3.27Å; L100-M121 HydrophobicContact CD2-SD 4.28Å; L100-M121 HydrophobicContact CG-CE 4.38Å; K117-M121 HydrophobicContact CG-CE 4.44Å; K117-M121 WeakPolarHBondContact O-CG 3.34Å; K117-M121 PolarHBondContact O-N 3.01Å; Q118-M121 PolarHBondContact O-N 3.44Å; Q118-M121 VanDerWaalsContact O-N 3.1Å; M121-V126 WeakPolarHBondContact O-CG2 3.21Å
122T89.9Confident87Confident89 Ų8979.9 Ų79.955%0.54642%0.418SS..Iπ-helixtrans-99.7-19.4-172.847.40000114.3Q118Q118-T122 PolarHBondContact O-N 3.36Å; Q118-T122 PolarHBondContact O-OG1 3.2Å
123E90Very high87Confident106 Ų10683.9 Ų83.950%0.49544%0.439SS..Iπ-helixtrans-125.8-56.2-170.4-142.7-179.4152.600111.3W119 N127W119-E123 PolarHBondContact NE1-OE2 3.29Å; W119-E123 WeakPolarHBondContact O-CA 3.16Å; W119-E123 VanDerWaalsContact O-CB 3.29Å; W119-E123 WeakPolarHBondContact O-CB 3.41Å; W119-E123 PolarHBondContact O-N 3.08Å; E123-N127 PolarHBondContact O-ND2 3.34Å
124A89.5Confident86.9Confident22 Ų2287.6 Ų87.618%0.18245%0.447CS..Iπ-helixtrans-75.3-32.9-168.900000114.7L79 W119 L120L79-A124 HydrophobicContact CD1-CB 4.04Å; L79-A124 HydrophobicContact CD2-CB 4.36Å; W119-A124 HydrophobicContact CD2-CB 4.48Å; W119-A124 HydrophobicContact CE3-CB 4.16Å; W119-A124 HydrophobicContact CH2-CB 3.89Å; W119-A124 HydrophobicContact CZ2-CB 4.21Å; W119-A124 HydrophobicContact CZ3-CB 3.86Å; W119-A124 PolarHBondContact O-N 3.18Å; L120-A124 HydrophobicContact CD2-CB 3.96Å
125L85.4Confident86.8Confident72 Ų7283.5 Ų83.538%0.37742%0.424SS..THydrogen-bonded Turntrans-103.2-4-175.5-61.7175.5000114.1L79 I82 L100 L120L79-L125 HydrophobicContact CD1-CD2 4.44Å; I82-L125 HydrophobicContact CG2-CD2 4.37Å; L100-L125 HydrophobicContact CD1-CD1 3.68Å; L120-L125 HydrophobicContact CB-CD1 4.49Å; L120-L125 WeakPolarHBondContact O-CB 3.43Å; L120-L125 WeakPolarHBondContact O-CG 3.45Å; L120-L125 PolarHBondContact O-N 3.16Å
126V82.2Confident86.6Confident108 Ų10875.7 Ų75.766%0.65540%0.395SS*.THydrogen-bonded Turntrans-98-24.8-179.6178.40000112M121M121-V126 WeakPolarHBondContact O-CG2 3.21Å
127N60.3Low86.5Confident189 Ų18978.2 Ų78.2100%1.01141%0.411SS*.  trans-81.10176.9-76.6-61000112.2E123E123-N127 PolarHBondContact O-ND2 3.34Å

Retrieved 127 of 127 residues in 96.1 ms (Link to these results)