A0A087WSS5_MOUSE Loading...

General transcription factor II E, polypeptide 2 (beta subunit)

AlphaFold DB , UniProt , Accession A0A087WSS5, Species MOUSE (Mus musculus, Mouse), Gene Gtf2e2, Length 62 aa.

Structure Viewer
Loading PAE data...
(Predicted Aligned Error values between residue pairs)
Error loading PAE data: please refresh the page.

Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M74.3Confident92.9Very high193 Ų193109 Ų10995%0.95154%0.537SS*.  0139.60-76.1-62.7154.500108.4L5 L6M1-L5 HydrophobicContact SD-CD2 4.2Å; M1-L6 HydrophobicContact CB-CD2 4.4Å
2D95.6Very high92.9Very high93 Ų93110.3 Ų110.350%0.49754%0.537SS..  trans-67.4130.2179.4-175.9-15000110.5S4 L5 L6D2-S4 WeakPolarHBondContact OD1-CB 3.34Å; D2-S4 PolarHBondContact OD1-N 2.83Å; D2-S4 PolarHBondContact OD1-OG 3.22Å; D2-S4 VanDerWaalsContact OD1-OG 3.06Å; D2-S4 PolarHBondContact OD2-OG 2.95Å; D2-S4 PolarHBondContact O-N 2.8Å; D2-L5 HydrophobicContact CB-CB 4.2Å; D2-L5 WeakPolarHBondContact O-CB 3.13Å; D2-L5 PolarHBondContact O-N 3.26Å; D2-L5 VanDerWaalsContact O-N 3.13Å; D2-L6 PolarHBondContact O-N 2.87Å
3P93.4Very high92.9Very high94 Ų94112 Ų11261%0.6154%0.54SS*.Hα-helixtrans-51.8-32171.7-27.434.7000114.3R7P3-R7 PolarHBondContact O-N 3.25Å; P3-R7 WeakPolarHBondContact O-CG 3.4Å
4S95.7Very high92.8Very high38 Ų38114.2 Ų114.227%0.26655%0.546SS..Hα-helixtrans-62.9-49.5175.874.90000111.3D2 L6 R7 D8D2-S4 WeakPolarHBondContact OD1-CB 3.34Å; D2-S4 PolarHBondContact OD1-N 2.83Å; D2-S4 PolarHBondContact OD1-OG 3.22Å; D2-S4 VanDerWaalsContact OD1-OG 3.06Å; D2-S4 PolarHBondContact OD2-OG 2.95Å; D2-S4 PolarHBondContact O-N 2.8Å; S4-L6 VanDerWaalsContact C-N 3.28Å; S4-L6 PolarHBondContact O-N 3.34Å; S4-R7 WeakPolarHBondContact O-CB 3.35Å; S4-R7 PolarHBondContact O-N 2.76Å; S4-R7 VanDerWaalsContact O-N 3.08Å; S4-D8 PolarHBondContact O-N 3.06Å
5L94.7Very high92.6Very high96 Ų96117.3 Ų117.350%0.50355%0.55SS.*Hα-helixtrans-62.2-35.3179.7-177.163.4000112.4M1 D2 D8 R9M1-L5 HydrophobicContact SD-CD2 4.2Å; D2-L5 HydrophobicContact CB-CB 4.2Å; D2-L5 WeakPolarHBondContact O-CB 3.13Å; D2-L5 PolarHBondContact O-N 3.26Å; D2-L5 VanDerWaalsContact O-N 3.13Å; L5-D8 PolarHBondContact O-N 3.21Å; L5-R9 WeakPolarHBondContact O-CB 3.22Å; L5-R9 PolarHBondContact O-N 2.8Å
6L95.6Very high92.4Very high72 Ų72112 Ų11238%0.37753%0.533SS..Hα-helixtrans-63.1-43.6174.9-66.6177.2000111.6M1 D2 S4 R9 E10M1-L6 HydrophobicContact CB-CD2 4.4Å; D2-L6 PolarHBondContact O-N 2.87Å; S4-L6 VanDerWaalsContact C-N 3.28Å; S4-L6 PolarHBondContact O-N 3.34Å; L6-R9 PolarHBondContact O-N 3.15Å; L6-E10 PolarHBondContact O-N 2.93Å; L6-E10 WeakPolarHBondContact O-CG 3.4Å
7R95.8Very high92Very high163 Ų163114.2 Ų114.262%0.61555%0.547SS*.Hα-helixtrans-65.1-42.6175.7-65.3-176.3-59.7162.73.6111.5P3 S4 R9 E10 L11P3-R7 PolarHBondContact O-N 3.25Å; P3-R7 WeakPolarHBondContact O-CG 3.4Å; S4-R7 WeakPolarHBondContact O-CB 3.35Å; S4-R7 PolarHBondContact O-N 2.76Å; S4-R7 VanDerWaalsContact O-N 3.08Å; R7-R9 VanDerWaalsContact C-N 3.33Å; R7-R9 PolarHBondContact O-N 3.09Å; R7-E10 WeakPolarHBondContact O-CB 3.25Å; R7-E10 PolarHBondContact O-N 2.98Å; R7-L11 WeakPolarHBondContact O-CG 3.33Å; R7-L11 PolarHBondContact O-N 3.14Å
8D93.9Very high91.6Very high92 Ų92113.3 Ų113.349%0.49256%0.555SS.*Hα-helixtrans-63.1-39.9178.5-69.3-12.9000111.7S4 L5 E10 L11 F12S4-D8 PolarHBondContact O-N 3.06Å; L5-D8 PolarHBondContact O-N 3.21Å; D8-E10 VanDerWaalsContact C-N 3.33Å; D8-E10 PolarHBondContact O-N 3.26Å; D8-L11 PolarHBondContact O-N 2.97Å; D8-F12 WeakPolarHBondContact O-CB 3.44Å; D8-F12 PolarHBondContact O-N 2.84Å
9R95.4Very high90.8Very high154 Ų154111.4 Ų111.458%0.58155%0.551SS**Hα-helixtrans-59.2-43.4173.3-174179.8112-101.86.3111.9L5 L6 R7 K13L5-R9 WeakPolarHBondContact O-CB 3.22Å; L5-R9 PolarHBondContact O-N 2.8Å; L6-R9 PolarHBondContact O-N 3.15Å; R7-R9 VanDerWaalsContact C-N 3.33Å; R7-R9 PolarHBondContact O-N 3.09Å; R9-K13 PolarHBondContact O-N 3.01Å; R9-K13 WeakPolarHBondContact O-CB 3.42Å
10E94.6Very high89.9Confident99 Ų99110.6 Ų110.646%0.46355%0.554SS.*Hα-helixtrans-66.2-41.7178.7-71.1173.5-162.200112L6 R7 D8 K14L6-E10 PolarHBondContact O-N 2.93Å; L6-E10 WeakPolarHBondContact O-CG 3.4Å; R7-E10 WeakPolarHBondContact O-CB 3.25Å; R7-E10 PolarHBondContact O-N 2.98Å; D8-E10 VanDerWaalsContact C-N 3.33Å; D8-E10 PolarHBondContact O-N 3.26Å; E10-K14 WeakPolarHBondContact O-CG 3.45Å; E10-K14 PolarHBondContact O-N 3.3Å; E10-K14 VanDerWaalsContact O-N 3.14Å
11L93.4Very high89.1Confident105 Ų105109.6 Ų109.655%0.5555%0.554SS.*Hα-helixtrans-66-44.3176.4-69.7174.5000111.8R7 D8 K13 K14 R15R7-L11 WeakPolarHBondContact O-CG 3.33Å; R7-L11 PolarHBondContact O-N 3.14Å; D8-L11 PolarHBondContact O-N 2.97Å; L11-K13 PolarHBondContact O-N 3.48Å; L11-K14 PolarHBondContact O-N 3.14Å; L11-R15 PolarHBondContact O-N 3.38Å
12F92.9Very high88.4Confident124 Ų124105.5 Ų105.554%0.54454%0.539SS..Hα-helixtrans-60.4-45.4176.7-179.5-95.4000111.4D8 K14 R15 A16 V21D8-F12 WeakPolarHBondContact O-CB 3.44Å; D8-F12 PolarHBondContact O-N 2.84Å; F12-K14 VanDerWaalsContact C-N 3.32Å; F12-K14 PolarHBondContact O-N 3.24Å; F12-R15 PolarHBondContact O-N 2.86Å; F12-R15 VanDerWaalsContact O-N 3.15Å; F12-A16 HydrophobicContact CE1-CB 4.26Å; F12-A16 PolarHBondContact O-N 2.95Å; F12-A16 WeakPolarHBondContact O-CB 3.36Å; F12-V21 HydrophobicContact CE2-CG2 4.01Å; F12-V21 HydrophobicContact CZ-CG2 4.21Å
13K92.2Very high86.8Confident133 Ų133109.8 Ų109.858%0.57856%0.556SS**Hα-helixtrans-58.2-43.5176.1-173.6178.366.61740111.8R9 L11 L17R9-K13 PolarHBondContact O-N 3.01Å; R9-K13 WeakPolarHBondContact O-CB 3.42Å; L11-K13 PolarHBondContact O-N 3.48Å; K13-L17 WeakPolarHBondContact O-CG 3.44Å; K13-L17 PolarHBondContact O-N 3.43Å
14K91.6Very high85.5Confident143 Ų143113.9 Ų113.962%0.62257%0.565SS**Hα-helixtrans-62.1-43.8175.7-72.4175.8-178.3176.20111.8E10 L11 F12E10-K14 WeakPolarHBondContact O-CG 3.45Å; E10-K14 PolarHBondContact O-N 3.3Å; E10-K14 VanDerWaalsContact O-N 3.14Å; L11-K14 PolarHBondContact O-N 3.14Å; F12-K14 VanDerWaalsContact C-N 3.32Å; F12-K14 PolarHBondContact O-N 3.24Å
15R89.3Confident83.8Confident160 Ų160124.2 Ų124.260%0.60460%0.598SS**Hα-helixtrans-65.8-47178.3-179.6178.8-98.3174.5-6.7111.5L11 F12 L17 S18 T19L11-R15 PolarHBondContact O-N 3.38Å; F12-R15 PolarHBondContact O-N 2.86Å; F12-R15 VanDerWaalsContact O-N 3.15Å; R15-L17 VanDerWaalsContact C-N 3.26Å; R15-L17 PolarHBondContact O-N 3.44Å; R15-S18 PolarHBondContact O-N 3.42Å; R15-T19 VanDerWaalsContact O-OG1 3.09Å; R15-T19 PolarHBondContact O-OG1 3.31Å; R15-T19 PolarHBondContact O-N 2.83Å; R15-T19 CarbonylContact O-C 3.55Å; R15-T19 WeakPolarHBondContact CG-OG1 3.49Å; R15-T19 VanDerWaalsContact CG-OG1 3.22Å
16A89.9Confident81.7Confident33 Ų33123.5 Ų123.527%0.27361%0.606SS.*Hα-helixtrans-61.8-31.6-175.900000113.5F12 P20F12-A16 HydrophobicContact CE1-CB 4.26Å; F12-A16 PolarHBondContact O-N 2.95Å; F12-A16 WeakPolarHBondContact O-CB 3.36Å; A16-P20 WeakPolarHBondContact O-CA 3.49Å
17L86.1Confident79.1Confident149 Ų149126.6 Ų126.678%0.7863%0.627SS**Hα-helixtrans-71.4-31.1175.7-68.8171.1000113.1K13 R15K13-L17 WeakPolarHBondContact O-CG 3.44Å; K13-L17 PolarHBondContact O-N 3.43Å; R15-L17 VanDerWaalsContact C-N 3.26Å; R15-L17 PolarHBondContact O-N 3.44Å
18S84.1Confident76.9Confident98 Ų98125.3 Ų125.369%0.68564%0.64SS**Hα-helixtrans-92.9-44.4-177.5177.80000112.2R15R15-S18 PolarHBondContact O-N 3.42Å
19T76.5Confident74.9Confident77 Ų77125.5 Ų125.547%0.47265%0.649SS.*SBendtrans-124.691178.258.80000107.5R15 V21R15-T19 VanDerWaalsContact O-OG1 3.09Å; R15-T19 PolarHBondContact O-OG1 3.31Å; R15-T19 PolarHBondContact O-N 2.83Å; R15-T19 CarbonylContact O-C 3.55Å; R15-T19 WeakPolarHBondContact CG-OG1 3.49Å; R15-T19 VanDerWaalsContact CG-OG1 3.22Å; T19-V21 PolarHBondContact O-N 2.96Å
20P74Confident72.5Confident95 Ų95126.7 Ų126.762%0.61766%0.661SS**  trans-58.9126.2178.123.7-32.5000109.2A16 V22A16-P20 WeakPolarHBondContact O-CA 3.49Å; P20-V22 PolarHBondContact O-N 3.17Å
21V71.3Confident70.5Confident90 Ų90127.1 Ų127.155%0.54568%0.675SS.*  trans-73.119.8-174-171.10000112.1F12 T19 E23F12-V21 HydrophobicContact CE2-CG2 4.01Å; F12-V21 HydrophobicContact CZ-CG2 4.21Å; T19-V21 PolarHBondContact O-N 2.96Å; V21-E23 VanDerWaalsContact C-N 3.3Å; V21-E23 PolarHBondContact O-N 3.43Å
22V60.8Low68.5Low108 Ų108128 Ų12866%0.65569%0.687SS**  trans-81.484.6178.4-167.30000108.2P20 K24P20-V22 PolarHBondContact O-N 3.17Å; V22-K24 HydrophobicContact CG1-CG 3.85Å; V22-K24 PolarHBondContact O-N 3.18Å
23E62.4Low66.4Low183 Ų183126.7 Ų126.786%0.85569%0.693SS**  trans-62.283.4155.9-69.6-176.4-178.500108.4V21 R25V21-E23 VanDerWaalsContact C-N 3.3Å; V21-E23 PolarHBondContact O-N 3.43Å; E23-R25 PolarHBondContact O-N 2.92Å
24K65.8Low64.1Low180 Ų180125.5 Ų125.578%0.78370%0.702SS**  trans-69.4111.4151.3-68.7-161.5170.8-174.30104.9V22 A26V22-K24 HydrophobicContact CG1-CG 3.85Å; V22-K24 PolarHBondContact O-N 3.18Å; K24-A26 PolarHBondContact O-N 3.01Å
25R60.3Low61.9Low254 Ų254124.1 Ų124.196%0.95871%0.71SS**SBendtrans-38.4100.2177.9-73.5-177.3177.5114.3-1111.5E23E23-R25 PolarHBondContact O-N 2.92Å
26A49.8Very low59.8Low82 Ų82121.7 Ų121.768%0.67872%0.718SS**  trans-159.6112.8155.700000108.9K24K24-A26 PolarHBondContact O-N 3.01Å
27V41.2Very low57.8Low136 Ų136125.5 Ų125.582%0.82474%0.742SS**  trans63.3131.7160.6-73.60000121S29V27-S29 PolarHBondContact O-N 2.94Å
28P50.2Low56.5Low136 Ų136128.4 Ų128.488%0.88375%0.749SS**  trans-77.3104.8174.133.3-29.1000108.4
29S50.3Low55.2Low97 Ų97133.6 Ų133.668%0.67876%0.759SS**  trans-138.7111163.2-167.20000109.4V27V27-S29 PolarHBondContact O-N 2.94Å
30E46.4Very low54.4Low178 Ų178138.9 Ų138.983%0.83278%0.775SS**  trans7289.7158.3-60.2-167.4116.600117.2
31S51.7Low53.3Low109 Ų109143.6 Ų143.676%0.76279%0.786SS**  trans-29.2121.4134.2-50.30000111.8S33S31-S33 PolarHBondContact O-N 2.88Å
32P51.3Low52.2Low122 Ų122143.3 Ų143.379%0.79279%0.793SS**  trans-76.588.3156.930.8-27.2000106.4
33S48.4Very low51.8Low97 Ų97147.2 Ų147.268%0.67880%0.802SS**  trans-53.2155165.6-172.60000110.5S31S31-S33 PolarHBondContact O-N 2.88Å
34S45.7Very low51.1Low108 Ų108143.5 Ų143.576%0.75579%0.791SS**  trans81.585.9144.862.60000119
35S44Very low50.3Low115 Ų115142.2 Ų142.280%0.80479%0.788SS**  trans-87.6124.5141.1600000110.5
36S46.3Very low49.7Very low109 Ų109138.2 Ų138.276%0.76278%0.78SS**  trans91.798.2162.6800000118.9
37S47.8Very low49.3Very low113 Ų113137 Ų13779%0.7978%0.775SS**  -178.499128.3-79.70000112.4
38K57.6Low49.9Very low209 Ų209134.2 Ų134.291%0.90977%0.774SS**  trans28.9100.3156.3-73.5166.1179164.80118.7
39K57.4Low50Low207 Ų207133.7 Ų133.790%0.977%0.774SS**  trans-168.4122140.333.3-152.9171.7177.10113.5
40K59.5Low50.2Low189 Ų189133.8 Ų133.882%0.82277%0.774SS**  trans11.7133.5163.8-79.6-169177.5179.70122
41K51.6Low50.6Low193 Ų193128.9 Ų128.984%0.83977%0.772SS**  trans70.6105.8148-62.5-177.5-168.2-78.60118.2
42A47.6Very low50.9Low85 Ų85129.1 Ų129.170%0.70277%0.773SS**  -166.3131.9109.100000108V44A42-V44 HydrophobicContact CB-CG2 4.38Å; A42-V44 PolarHBondContact O-N 3.13Å; A42-V44 VanDerWaalsContact C-N 3.27Å
43K53.3Low51.4Low190 Ų190133.4 Ų133.483%0.82678%0.779SS**  trans-63.497.2159.6-109.9179.1167.8-174.30105.4E45K43-E45 PolarHBondContact O-N 3.19Å
44V47.3Very low51.9Low105 Ų105137.4 Ų137.464%0.63679%0.787SS**  trans-86.882.8160.9174.90000105.1A42 H46A42-V44 HydrophobicContact CB-CG2 4.38Å; A42-V44 PolarHBondContact O-N 3.13Å; A42-V44 VanDerWaalsContact C-N 3.27Å; V44-H46 HydrophobicContact CG1-CB 3.83Å; V44-H46 WeakPolarHBondContact CG1-CD2 3.37Å; V44-H46 PolarHBondContact O-N 3.18Å
45E49.1Very low52.3Low153 Ų153137.7 Ų137.772%0.71578%0.78SS**  trans-67.768.2154.7-67.3-83146.100106.5K43 G47K43-E45 PolarHBondContact O-N 3.19Å; E45-G47 PolarHBondContact O-N 3.29Å; E45-G47 VanDerWaalsContact O-N 3.09Å
46H46.3Very low52.8Low170 Ų170136.4 Ų136.479%0.78777%0.771SS**  trans-81.781.7154.2-93.2-54.7000105.7V44 G48V44-H46 HydrophobicContact CG1-CB 3.83Å; V44-H46 WeakPolarHBondContact CG1-CD2 3.37Å; V44-H46 PolarHBondContact O-N 3.18Å; H46-G48 PolarHBondContact O-N 3.08Å
47G42.9Very low53.1Low56 Ų56138 Ų13858%0.57777%0.771SS**  trans-38.9124.8165.200000108.4E45 S49E45-G47 PolarHBondContact O-N 3.29Å; E45-G47 VanDerWaalsContact O-N 3.09Å; G47-S49 PolarHBondContact O-N 3.31Å
48G52.7Low53.9Low78 Ų78140.4 Ų140.480%0.80477%0.77SS**  trans-48.3110170.700000107.2H46 S50H46-G48 PolarHBondContact O-N 3.08Å; G48-S50 PolarHBondContact O-N 2.97Å
49S52Low54.3Low125 Ų125137.8 Ų137.887%0.87477%0.766SS**  trans-62.2111.7178.7-149.60000106.6G47G47-S49 PolarHBondContact O-N 3.31Å
50S55.1Low54.7Low98 Ų98135.1 Ų135.169%0.68576%0.761SS**  trans0.2116.5166.3-1710000114.7G48 S52G48-S50 PolarHBondContact O-N 2.97Å; S50-S52 PolarHBondContact O-N 2.74Å
51G56Low54.7Low76 Ų76128.8 Ų128.878%0.78475%0.75SS**  trans-57110.7164.200000109.6
52S56.7Low54.6Low113 Ų113128.9 Ų128.979%0.7978%0.775SS**  trans-95.2102155.9-69.80000107S50 Q54S50-S52 PolarHBondContact O-N 2.74Å; S52-Q54 PolarHBondContact O-N 3.06Å; S52-Q54 VanDerWaalsContact O-N 3.14Å
53K63Low55Low212 Ų212131.1 Ų131.192%0.92278%0.778SS**  trans-56.8112.7163.9-63.1-174.2179.1-176.30107.2
54Q57.1Low55.1Low182 Ų182127.9 Ų127.985%0.8578%0.776SS**  trans-121.196.3150.5176.8154.4-600108S52S52-Q54 PolarHBondContact O-N 3.06Å; S52-Q54 VanDerWaalsContact O-N 3.14Å
55N55.9Low55.5Low113 Ų113129.2 Ų129.260%0.60478%0.783SS**  trans9.7122.9142.7-157.53.2000116.6D57N55-D57 PolarHBondContact OD1-N 3.21Å; N55-D57 PolarHBondContact OD1-OD2 2.85Å
56S53.7Low55.9Low88 Ų88127.8 Ų127.862%0.61579%0.787SS**  trans-156.589.5132.6-67.10000106.6H58S56-H58 WeakPolarHBondContact CB-CE1 3.43Å; S56-H58 WeakPolarHBondContact CB-ND1 3.44Å; S56-H58 PolarHBondContact O-N 2.91Å; S56-H58 PolarHBondContact O-ND1 3.26Å
57D52.9Low56.5Low143 Ų143125.2 Ų125.277%0.76579%0.788SS**  trans-52.894.4156.1-68.1-61.9000107.9N55 N59N55-D57 PolarHBondContact OD1-N 3.21Å; N55-D57 PolarHBondContact OD1-OD2 2.85Å; D57-N59 PolarHBondContact O-N 3.09Å
58H65.1Low57.4Low164 Ų164129.8 Ų129.876%0.75980%0.802SS**  trans-8171167.7-68.358.1000106.4S56 N60S56-H58 WeakPolarHBondContact CB-CE1 3.43Å; S56-H58 WeakPolarHBondContact CB-ND1 3.44Å; S56-H58 PolarHBondContact O-N 2.91Å; S56-H58 PolarHBondContact O-ND1 3.26Å; H58-N60 PolarHBondContact O-N 2.96Å
59N66Low57.7Low153 Ų153133.5 Ų133.582%0.81880%0.801SS**  trans-73.181.8164.6-165.733000107.1D57D57-N59 PolarHBondContact O-N 3.09Å
60N64.9Low58.2Low151 Ų151134.2 Ų134.281%0.80780%0.796SS**  trans-96.887.8164.4-160.625.9000107.3H58H58-N60 PolarHBondContact O-N 2.96Å
61G59.3Low58.4Low57 Ų57137.2 Ų137.259%0.58881%0.805SS**  trans-68.7130.117100000110.6
62S50.7Low58.7Low194 Ų194142.7 Ų142.7100%1.35781%0.807SS**  trans-152.90152.4-71.10000107.7

Retrieved 62 of 62 residues in 24.7 ms (Link to these results)