A0A087WSZ8_HUMAN Loading...

Ribonuclease K

AlphaFold DB , UniProt , Accession A0A087WSZ8, Species HUMAN (Homo sapiens, Human), Gene RNASEK, Length 55 aa.

						>A0A087WSZ8_HUMAN|A0A087WSZ8|RNASEK
MKKCRFSLPSSALSRDDDASREDDNLGSWERWLGHYSHPCLDHLSQCHHLTPCSR
					

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(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	36.5	Very low	54.1	Low	251 Å²	251	160 Å²	160	100%	1.236	84%	0.837	S	S	*	*				0	140.4	0	-76.4	175.9	171.9	0	0	109.4
2	K	46.9	Very low	54.3	Low	203 Å²	203	154 Å²	154	88%	0.883	83%	0.828	S	S	*	*			trans	-64.8	152.6	-174.7	-70.7	168	173	169.7	0	113.1
3	K	43	Very low	54.4	Low	186 Å²	186	154.5 Å²	154.5	81%	0.809	83%	0.829	S	S	*	*			trans	-152.4	82.7	142.8	-156	103.9	170	-166.9	0	110.6	R5	K3-R5 PolarHBondContact O-N 3.08Å; K3-R5 HydrophobicContact CG-CG 4.45Å
4	C	58.4	Low	54.7	Low	113 Å²	113	151.5 Å²	151.5	76%	0.764	83%	0.826	S	S	*	*			trans	-83.4	108.9	161.1	-67.3	0	0	0	0	107	F6	C4-F6 PolarHBondContact O-N 3.34Å
5	R	58.7	Low	54.7	Low	221 Å²	221	156.6 Å²	156.6	83%	0.834	83%	0.828	S	S	*	*			trans	-70.8	119.3	173.9	-70.4	179.6	172	176.6	-3.1	107.8	K3	K3-R5 PolarHBondContact O-N 3.08Å; K3-R5 HydrophobicContact CG-CG 4.45Å
6	F	61.4	Low	55.5	Low	190 Å²	190	156.8 Å²	156.8	83%	0.833	83%	0.83	S	S	*	*			trans	-84	110.3	168.7	-83.5	-89.9	0	0	0	108.4	C4	C4-F6 PolarHBondContact O-N 3.34Å
7	S	62.8	Low	55.9	Low	115 Å²	115	156.2 Å²	156.2	80%	0.804	83%	0.827	S	S	*	*			trans	-84.8	106.7	166.4	-57.4	0	0	0	0	107.6
8	L	61.2	Low	56.3	Low	154 Å²	154	155.2 Å²	155.2	81%	0.806	82%	0.822	S	S	*	*			trans	-77.6	134.1	172.1	-76.8	158.1	0	0	0	109.2
9	P	53.6	Low	56.3	Low	98 Å²	98	151.6 Å²	151.6	64%	0.636	82%	0.817	S	S	*	*			trans	-71	143.7	176.4	27.9	-30.8	0	0	0	110.7	S11	P9-S11 PolarHBondContact O-N 2.98Å
10	S	57.3	Low	56.5	Low	118 Å²	118	150 Å²	150	83%	0.825	82%	0.817	S	S	*	*	G	3₁₀ helix	trans	-62	9.7	-176.2	-55	0	0	0	0	116	A12	S10-A12 PolarHBondContact O-N 2.95Å
11	S	55.7	Low	56.8	Low	111 Å²	111	151.6 Å²	151.6	78%	0.776	81%	0.811	S	S	*	*	G	3₁₀ helix	trans	-80.9	5.2	174.9	-52.9	0	0	0	0	113.5	P9 L13	P9-S11 PolarHBondContact O-N 2.98Å; S11-L13 PolarHBondContact O-N 3.41Å
12	A	55.6	Low	58	Low	88 Å²	88	148.7 Å²	148.7	73%	0.727	80%	0.795	S	S	*	*	G	3₁₀ helix	trans	-74.6	4.2	177	0	0	0	0	0	114.3	S10	S10-A12 PolarHBondContact O-N 2.95Å
13	L	55.6	Low	58.6	Low	160 Å²	160	145.2 Å²	145.2	84%	0.838	79%	0.786	S	S	*	*	S	Bend	trans	-126.5	83	-177.7	-65.1	173.6	0	0	0	109.8	S11	S11-L13 PolarHBondContact O-N 3.41Å
14	S	58.7	Low	59.4	Low	113 Å²	113	142 Å²	142	79%	0.79	78%	0.777	S	S	*	*			trans	161.4	101.5	143.8	-175.8	0	0	0	0	110.9
15	R	55.8	Low	59.5	Low	228 Å²	228	140.9 Å²	140.9	86%	0.86	76%	0.764	S	S	*	*			trans	-175.1	91.2	130.8	-108.2	175.5	86.8	171.9	4.6	108.1
16	D	67.5	Low	59.5	Low	160 Å²	160	136.8 Å²	136.8	86%	0.856	76%	0.758	S	S	*	*			trans	-63.5	128	139.4	-62	-73.8	0	0	0	106.6
17	D	61.8	Low	59.4	Low	146 Å²	146	130.1 Å²	130.1	78%	0.781	74%	0.743	S	S	*	*				175.6	130.2	128.8	-151.5	-128.5	0	0	0	110.3
18	D	62.9	Low	59.4	Low	139 Å²	139	126.9 Å²	126.9	74%	0.743	72%	0.72	S	S	*	*			trans	57	99.3	153.1	-156	-108.3	0	0	0	119.5
19	A	56.3	Low	59.4	Low	87 Å²	87	127.5 Å²	127.5	72%	0.719	71%	0.712	S	S	*	*			trans	-158.9	91	136.6	0	0	0	0	0	109.4	R21	A19-R21 PolarHBondContact O-N 3.44Å
20	S	60	Low	59.8	Low	118 Å²	118	129.7 Å²	129.7	83%	0.825	71%	0.714	S	S	*	*			trans	-56.2	91.1	150.6	-178.6	0	0	0	0	108.2
21	R	62.4	Low	60.1	Low	184 Å²	184	132.8 Å²	132.8	69%	0.694	71%	0.707	S	S	*	*			trans	-149.5	52.4	166.1	-145.3	175.2	77.3	-170.8	6.5	110.7	A19 D23 D24	A19-R21 PolarHBondContact O-N 3.44Å; R21-D23 VanDerWaalsContact C-N 3.28Å; R21-D23 PolarHBondContact O-N 3.24Å; R21-D24 WeakPolarHBondContact CD-OD2 3.36Å; R21-D24 IonicContact NE-OD2 3.73Å
22	E	61.8	Low	60.4	Low	191 Å²	191	135.2 Å²	135.2	89%	0.893	70%	0.7	S	S	*	*			trans	-81.5	75.3	166.3	-54.1	-173.4	102.7	0	0	108.3
23	D	59.4	Low	60.7	Low	130 Å²	130	136.6 Å²	136.6	70%	0.695	69%	0.694	S	S	*	*	S	Bend	trans	-169.9	-20.9	151.8	-145	-130.4	0	0	0	114.8	R21 N25	R21-D23 VanDerWaalsContact C-N 3.28Å; R21-D23 PolarHBondContact O-N 3.24Å; D23-N25 PolarHBondContact O-N 3.38Å
24	D	59.9	Low	61	Low	117 Å²	117	131.7 Å²	131.7	63%	0.626	68%	0.682	S	S	*	*	T	Hydrogen-bonded Turn	trans	-86.2	0.6	-169.6	-67.5	-52.1	0	0	0	115.8	R21	R21-D24 WeakPolarHBondContact CD-OD2 3.36Å; R21-D24 IonicContact NE-OD2 3.73Å
25	N	60.7	Low	61.1	Low	90 Å²	90	132.5 Å²	132.5	48%	0.481	67%	0.673	S	S	.	*	T	Hydrogen-bonded Turn	trans	-98.6	-15	-171.7	-163	17.9	0	0	0	114.2	D23 G27 S28 W29	D23-N25 PolarHBondContact O-N 3.38Å; N25-G27 PolarHBondContact O-N 2.81Å; N25-S28 WeakPolarHBondContact OD1-CB 3.49Å; N25-S28 PolarHBondContact O-N 3.32Å; N25-W29 PolarHBondContact ND2-NE1 3.24Å; N25-W29 PolarHBondContact O-NE1 3.1Å; N25-W29 PolarHBondContact OD1-NE1 3.45Å
26	L	58.4	Low	61.2	Low	136 Å²	136	130.6 Å²	130.6	71%	0.712	67%	0.667	S	S	*	*	T	Hydrogen-bonded Turn	trans	-68.1	-32.6	-171	-69.2	171.2	0	0	0	113.4
27	G	60.8	Low	60.8	Low	50 Å²	50	126.7 Å²	126.7	52%	0.515	65%	0.653	S	S	.	*	T	Hydrogen-bonded Turn	trans	-81.8	-9.4	175.5	0	0	0	0	0	115.1	N25	N25-G27 PolarHBondContact O-N 2.81Å
28	S	61.5	Low	60.8	Low	47 Å²	47	126.1 Å²	126.1	33%	0.329	65%	0.645	S	S	.	*	H	α-helix	trans	-76.5	-36.8	-176.9	-156.5	0	0	0	0	111.4	N25 E30 R31 W32	N25-S28 WeakPolarHBondContact OD1-CB 3.49Å; N25-S28 PolarHBondContact O-N 3.32Å; S28-E30 PolarHBondContact O-N 3.37Å; S28-R31 WeakPolarHBondContact O-CB 3.47Å; S28-R31 PolarHBondContact O-N 3.49Å; S28-W32 PolarHBondContact O-N 2.74Å
29	W	61.3	Low	60.5	Low	166 Å²	166	124.9 Å²	124.9	63%	0.629	65%	0.645	S	S	*	*	H	α-helix	trans	-63.7	-37.1	-178.4	-57.2	80.2	0	0	0	112.9	N25 R31 W32 L33	N25-W29 PolarHBondContact ND2-NE1 3.24Å; N25-W29 PolarHBondContact O-NE1 3.1Å; N25-W29 PolarHBondContact OD1-NE1 3.45Å; W29-R31 VanDerWaalsContact C-N 3.33Å; W29-R31 PolarHBondContact O-N 3.3Å; W29-W32 PolarHBondContact O-N 3.28Å; W29-L33 VanDerWaalsContact O-N 3.1Å; W29-L33 PolarHBondContact O-N 3.5Å; W29-L33 WeakPolarHBondContact O-CG 3.46Å
30	E	63.2	Low	60.5	Low	144 Å²	144	124.9 Å²	124.9	67%	0.673	64%	0.639	S	S	*	*	H	α-helix	trans	-65.3	-38.5	177.3	-64.1	178	113	0	0	111.7	S28 W32 L33 G34	S28-E30 PolarHBondContact O-N 3.37Å; E30-W32 VanDerWaalsContact C-N 3.35Å; E30-W32 PolarHBondContact O-N 3.37Å; E30-L33 PolarHBondContact O-N 3.29Å; E30-G34 PolarHBondContact O-N 3.4Å
31	R	63.1	Low	60.1	Low	184 Å²	184	125 Å²	125	69%	0.694	63%	0.629	S	S	*	*	H	α-helix	trans	-65.5	-38.1	176.1	-168.2	170.9	170.9	96.8	-1.1	111.5	S28 W29 H35	S28-R31 WeakPolarHBondContact O-CB 3.47Å; S28-R31 PolarHBondContact O-N 3.49Å; W29-R31 VanDerWaalsContact C-N 3.33Å; W29-R31 PolarHBondContact O-N 3.3Å; R31-H35 PolarHBondContact O-CD2 3.37Å
32	W	62.8	Low	59.7	Low	162 Å²	162	123 Å²	123	61%	0.614	63%	0.632	S	S	*	*	H	α-helix	trans	-64.5	-41.4	173.7	-75.9	103.7	0	0	0	112.6	S28 W29 E30 G34 H35 Y36	S28-W32 PolarHBondContact O-N 2.74Å; W29-W32 PolarHBondContact O-N 3.28Å; E30-W32 VanDerWaalsContact C-N 3.35Å; E30-W32 PolarHBondContact O-N 3.37Å; W32-G34 VanDerWaalsContact C-N 3.35Å; W32-G34 PolarHBondContact O-N 3.02Å; W32-H35 PolarHBondContact O-N 3.17Å; W32-Y36 HydrophobicContact CE3-CE2 4.24Å; W32-Y36 PolarHBondContact O-N 3.24Å
33	L	61.8	Low	59.2	Low	116 Å²	116	119.6 Å²	119.6	61%	0.607	62%	0.616	S	S	*	*	H	α-helix	trans	-64.8	-36.8	179.8	-72.9	168.1	0	0	0	112.7	W29 E30 H35 Y36 S37	W29-L33 VanDerWaalsContact O-N 3.1Å; W29-L33 PolarHBondContact O-N 3.5Å; W29-L33 WeakPolarHBondContact O-CG 3.46Å; E30-L33 PolarHBondContact O-N 3.29Å; L33-H35 PolarHBondContact O-N 3.19Å; L33-H35 VanDerWaalsContact C-N 3.28Å; L33-Y36 PolarHBondContact O-N 3.35Å; L33-S37 PolarHBondContact O-N 3.17Å; L33-S37 PolarHBondContact O-OG 3.49Å
34	G	61	Low	58.9	Low	57 Å²	57	118.8 Å²	118.8	59%	0.588	61%	0.611	S	S	*	*	H	α-helix	trans	-62.4	-32.5	175.2	0	0	0	0	0	113.8	E30 W32	E30-G34 PolarHBondContact O-N 3.4Å; W32-G34 VanDerWaalsContact C-N 3.35Å; W32-G34 PolarHBondContact O-N 3.02Å
35	H	61.3	Low	58.6	Low	131 Å²	131	117.3 Å²	117.3	61%	0.606	61%	0.61	S	S	*	*	H	α-helix	trans	-79.5	-28.1	178.9	-72.6	-63	0	0	0	113.9	R31 W32 L33	R31-H35 PolarHBondContact O-CD2 3.37Å; W32-H35 PolarHBondContact O-N 3.17Å; L33-H35 PolarHBondContact O-N 3.19Å; L33-H35 VanDerWaalsContact C-N 3.28Å
36	Y	57.9	Low	58.3	Low	187 Å²	187	120 Å²	120	73%	0.733	62%	0.62	S	S	*	*	H	α-helix	trans	-85.3	-11.9	177.7	-87.6	-85.7	0	0	0	113.9	W32 L33 H38	W32-Y36 HydrophobicContact CE3-CE2 4.24Å; W32-Y36 PolarHBondContact O-N 3.24Å; L33-Y36 PolarHBondContact O-N 3.35Å; Y36-H38 PolarHBondContact O-N 3.22Å
37	S	59.4	Low	58.1	Low	78 Å²	78	117.3 Å²	117.3	55%	0.545	61%	0.612	S	S	.	*	S	Bend	trans	-79.7	-14.5	-170.6	-64	0	0	0	0	114.8	L33	L33-S37 PolarHBondContact O-N 3.17Å; L33-S37 PolarHBondContact O-OG 3.49Å
38	H	61	Low	57.8	Low	134 Å²	134	122.4 Å²	122.4	62%	0.62	62%	0.622	S	S	*	*			trans	-153.7	125.5	173	-79.4	155.6	0	0	0	113.9	Y36 L41	Y36-H38 PolarHBondContact O-N 3.22Å; H38-L41 WeakPolarHBondContact NE2-CD1 3.48Å
39	P	56.7	Low	57.6	Low	114 Å²	114	127.9 Å²	127.9	74%	0.74	64%	0.641	S	S	*	*	S	Bend		-135.5	17.1	120.1	38.3	-28.2	0	0	0	114.8
40	C	55.8	Low	57.6	Low	87 Å²	87	127.8 Å²	127.8	59%	0.588	65%	0.652	S	S	*	*	S	Bend	trans	-131.3	18.1	-166.5	-83.1	0	0	0	0	118
41	L	52.7	Low	57.4	Low	121 Å²	121	126.3 Å²	126.3	63%	0.634	65%	0.654	S	S	*	*	S	Bend	trans	-94.3	-26.1	171.3	-83.5	167.6	0	0	0	114.2	H38	H38-L41 WeakPolarHBondContact NE2-CD1 3.48Å
42	D	52.6	Low	57.2	Low	142 Å²	142	123.3 Å²	123.3	76%	0.759	66%	0.658	S	S	*	*	S	Bend	trans	-84.4	-15.5	174	-82.6	-59	0	0	0	114.4
43	H	52.4	Low	56.7	Low	118 Å²	118	121.7 Å²	121.7	55%	0.546	67%	0.67	S	S	.	*	S	Bend	trans	-85.3	-14.8	-178.6	-151.7	88.8	0	0	0	113.6	S45	H43-S45 VanDerWaalsContact C-N 3.34Å
44	L	53.1	Low	56.5	Low	113 Å²	113	121.8 Å²	121.8	59%	0.592	68%	0.68	S	S	*	*	S	Bend	trans	-76	-22.6	176.4	-76.4	165.3	0	0	0	112.8
45	S	54.1	Low	56	Low	87 Å²	87	134.3 Å²	134.3	61%	0.608	71%	0.71	S	S	*	*	S	Bend	trans	-75	-25.1	178.6	-172.6	0	0	0	0	113	H43	H43-S45 VanDerWaalsContact C-N 3.34Å
46	Q	53.9	Low	55.7	Low	147 Å²	147	134.5 Å²	134.5	69%	0.687	72%	0.715	S	S	*	*	G	3₁₀ helix	trans	-86.4	-12.9	-175.8	-67.4	179.9	48	0	0	113.8
47	C	53.8	Low	55.6	Low	79 Å²	79	131.7 Å²	131.7	53%	0.534	71%	0.714	S	S	.	*	G	3₁₀ helix	trans	-89.3	-0.3	-175.8	-66.6	0	0	0	0	115.1
48	H	54.8	Low	55.4	Low	157 Å²	157	134.7 Å²	134.7	73%	0.727	72%	0.723	S	S	*	*	G	3₁₀ helix	trans	-102.3	6.4	-177.5	-76.8	-87.9	0	0	0	115.5
49	H	58	Low	55	Low	161 Å²	161	134.7 Å²	134.7	75%	0.745	73%	0.729	S	S	*	*			trans	-113.8	23.2	179.2	-65.3	-66	0	0	0	114.8	T51	H49-T51 VanDerWaalsContact C-N 3.32Å; H49-T51 PolarHBondContact O-N 3.4Å
50	L	59.8	Low	54.9	Low	164 Å²	164	136 Å²	136	86%	0.859	73%	0.729	S	S	*	*			trans	-69.2	100	160.6	-69.9	175.5	0	0	0	108
51	T	59.9	Low	54.9	Low	114 Å²	114	139.3 Å²	139.3	70%	0.699	74%	0.738	S	S	*	*			trans	-31.6	135.1	172.6	-34.8	0	0	0	0	111.8	H49 C53	H49-T51 VanDerWaalsContact C-N 3.32Å; H49-T51 PolarHBondContact O-N 3.4Å; T51-C53 PolarHBondContact O-N 2.86Å
52	P	58.1	Low	55	Low	120 Å²	120	140.6 Å²	140.6	78%	0.779	75%	0.745	S	S	*	*			trans	-62.8	113.2	166.8	24.9	-28.2	0	0	0	107.4	S54	P52-S54 PolarHBondContact O-N 3.34Å; P52-S54 VanDerWaalsContact O-N 3.08Å
53	C	53.7	Low	55.2	Low	129 Å²	129	140.5 Å²	140.5	87%	0.872	74%	0.744	S	S	*	*			trans	-56.7	115.6	169.9	-66.9	0	0	0	0	107.9	T51 R55	T51-C53 PolarHBondContact O-N 2.86Å; C53-R55 PolarHBondContact O-N 3.19Å
54	S	57.1	Low	55.5	Low	118 Å²	118	142.3 Å²	142.3	83%	0.825	76%	0.761	S	S	*	*			trans	-65.1	118.6	168.4	32	0	0	0	0	109.9	P52	P52-S54 PolarHBondContact O-N 3.34Å; P52-S54 VanDerWaalsContact O-N 3.08Å
55	R	49.4	Very low	55.7	Low	319 Å²	319	145 Å²	145	100%	1.204	78%	0.776	S	S	*	*			trans	-159.5	0	140.5	-130.7	179.9	-170.9	-134.2	1.6	111.6	C53	C53-R55 PolarHBondContact O-N 3.19Å

Retrieved 55 of 55 residues in 23.7 ms (Link to these results)

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