A0A087WTX8_HUMAN Loading...

Secretory carrier membrane protein 1

AlphaFold DB , UniProt , Accession A0A087WTX8, Species HUMAN (Homo sapiens, Human), Gene SCAMP1, Length 42 aa.

>A0A087WTX8_HUMAN|A0A087WTX8|SCAMP1
MPNVPNTQPAIMKPTEEHPAYTQIAKEHALAQAELLKRQEEL
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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M54.3Low74.7Confident235 Ų235140.3 Ų140.3100%1.15881%0.805SS**  0119.70-60.5174.5-172.400106.7N3M1-N3 PolarHBondContact O-N 3.28Å
2P63.6Low75.4Confident122 Ų122142.2 Ų142.279%0.79281%0.805SS**  trans-73.4127.3-17929.9-30.5000109.1V4P2-V4 PolarHBondContact O-N 3.13Å
3N70.5Confident76.2Confident160 Ų160145.5 Ų145.586%0.85681%0.805SS**  trans-72.295.7179.5-156.767.6000108.1M1 P5M1-N3 PolarHBondContact O-N 3.28Å; N3-P5 WeakPolarHBondContact O-CD 3.5Å
4V71.2Confident76.4Confident123 Ų123143.6 Ų143.675%0.74580%0.803SS**  trans-69.3121.3179.2-153.10000107.8P2 N6P2-V4 PolarHBondContact O-N 3.13Å; V4-N6 PolarHBondContact O-N 3.08Å
5P75.6Confident76.5Confident100 Ų100141.9 Ų141.965%0.64980%0.797SS**  trans-59.5125.6174.6-18.730.6000108.7N3 T7N3-P5 WeakPolarHBondContact O-CD 3.5Å; P5-T7 PolarHBondContact O-N 3.46Å
6N74.4Confident76.4Confident147 Ų147144.6 Ų144.679%0.78680%0.801SS**  trans-69.394.8175.5-174.3-4.3000108.6V4 Q8V4-N6 PolarHBondContact O-N 3.08Å; N6-Q8 VanDerWaalsContact C-N 3.27Å; N6-Q8 PolarHBondContact O-N 3.27Å; N6-Q8 VanDerWaalsContact O-N 3.11Å
7T80.3Confident76.1Confident121 Ų121142.9 Ų142.974%0.74279%0.786SS**  trans-8569.8177.759.50000109.4P5P5-T7 PolarHBondContact O-N 3.46Å
8Q82.8Confident76.3Confident164 Ų164142.8 Ų142.877%0.76678%0.779SS**PPolyproline II helixtrans-71.2125.8168.6-155177.164.500108N6 A10N6-Q8 VanDerWaalsContact C-N 3.27Å; N6-Q8 PolarHBondContact O-N 3.27Å; N6-Q8 VanDerWaalsContact O-N 3.11Å; Q8-A10 PolarHBondContact O-N 2.89Å
9P80.8Confident76.3Confident110 Ų110141 Ų14171%0.71478%0.775SS**PPolyproline II helixtrans-62.9131.4179.124.1-31.7000109.7I11P9-I11 PolarHBondContact O-N 3.21Å
10A82.1Confident76.4Confident97 Ų97137.2 Ų137.280%0.80276%0.763SS**PPolyproline II helixtrans-69.1116.9178.300000109.7Q8 M12Q8-A10 PolarHBondContact O-N 2.89Å; A10-M12 PolarHBondContact O-N 3.44Å
11I85.8Confident76.4Confident164 Ų164137.5 Ų137.584%0.84175%0.754SS**  trans-78.3104.7172.4-57.8172.9000107.1P9P9-I11 PolarHBondContact O-N 3.21Å
12M83.9Confident77.6Confident163 Ų163128.8 Ų128.880%0.80371%0.714SS**PPolyproline II helixtrans-70.8137.2169.9-73.4-178.66500109.5A10A10-M12 PolarHBondContact O-N 3.44Å
13K85.3Confident78.4Confident185 Ų185127.6 Ų127.680%0.80470%0.697SS**PPolyproline II helixtrans-64.8145.9171.3-60.8-165.5-168.9-175.70109.3T15K13-T15 PolarHBondContact O-N 3.24Å
14P78.4Confident79.1Confident120 Ų120124.2 Ų124.278%0.77968%0.678SS**PPolyproline II helixtrans-55.8131.7168.9-18.530000108.9E16P14-E16 PolarHBondContact O-N 3.09Å; P14-E16 VanDerWaalsContact O-N 3.17Å
15T78.2Confident79.9Confident117 Ų117120.5 Ų120.572%0.71866%0.66SS**PPolyproline II helixtrans-64.3116.6172-56.90000107.7K13 E17K13-T15 PolarHBondContact O-N 3.24Å; T15-E17 PolarHBondContact O-N 3.35Å
16E74.6Confident80.5Confident185 Ų185121.5 Ų121.586%0.86466%0.655SS**PPolyproline II helixtrans-66.5120.3167-79.5177.6108.500107.9P14 H18P14-E16 PolarHBondContact O-N 3.09Å; P14-E16 VanDerWaalsContact O-N 3.17Å; E16-H18 PolarHBondContact O-N 3.42Å
17E72.4Confident81.4Confident117 Ų117119.5 Ų119.555%0.54764%0.641SS.*PPolyproline II helixtrans-59.9135176.1-76.8-76.399.300109.9T15 Y21T15-E17 PolarHBondContact O-N 3.35Å; E17-Y21 WeakPolarHBondContact OE2-CD1 3.31Å; E17-Y21 VanDerWaalsContact OE2-CE1 3.26Å; E17-Y21 WeakPolarHBondContact OE2-CE1 3.42Å
18H78.8Confident82Confident141 Ų141119.5 Ų119.565%0.65363%0.632SS**PPolyproline II helixtrans-59.4137.9-179.3-75.7-92.9000110.7E16 A20 Y21 T22E16-H18 PolarHBondContact O-N 3.42Å; H18-A20 PolarHBondContact O-N 2.99Å; H18-A20 VanDerWaalsContact O-N 3.16Å; H18-Y21 PolarHBondContact O-N 3.01Å; H18-T22 PolarHBondContact O-N 3.46Å; H18-T22 PolarHBondContact O-OG1 2.96Å
19P77.1Confident82.5Confident108 Ų108114.4 Ų114.470%0.70162%0.618SS**Hα-helixtrans-60.9-30.7-177.421.4-31.8000112.4T22 Q23P19-T22 WeakPolarHBondContact O-CB 3.34Å; P19-T22 PolarHBondContact O-N 3.37Å; P19-Q23 WeakPolarHBondContact O-CB 3.46Å; P19-Q23 PolarHBondContact O-N 2.91Å
20A78.1Confident83.2Confident65 Ų65115 Ų11554%0.53762%0.615SS.*Hα-helixtrans-63.9-44.3174.200000112.4H18 T22 Q23 I24H18-A20 PolarHBondContact O-N 2.99Å; H18-A20 VanDerWaalsContact O-N 3.16Å; A20-T22 VanDerWaalsContact C-N 3.32Å; A20-Q23 PolarHBondContact O-N 3.36Å; A20-I24 WeakPolarHBondContact O-CD1 3.47Å; A20-I24 VanDerWaalsContact O-CG1 3.3Å; A20-I24 WeakPolarHBondContact O-CG1 3.26Å; A20-I24 PolarHBondContact O-N 3.48Å
21Y75.8Confident83.7Confident144 Ų144112.9 Ų112.957%0.56560%0.597SS**Hα-helixtrans-67.2-37.8176.8-173.9-101.5000111.1E17 H18 Q23 I24 A25E17-Y21 WeakPolarHBondContact OE2-CD1 3.31Å; E17-Y21 VanDerWaalsContact OE2-CE1 3.26Å; E17-Y21 WeakPolarHBondContact OE2-CE1 3.42Å; H18-Y21 PolarHBondContact O-N 3.01Å; Y21-Q23 VanDerWaalsContact C-N 3.32Å; Y21-Q23 PolarHBondContact O-N 3.45Å; Y21-I24 PolarHBondContact O-N 3.45Å; Y21-A25 VanDerWaalsContact O-CB 3.26Å; Y21-A25 WeakPolarHBondContact O-CB 3.47Å; Y21-A25 PolarHBondContact O-N 3.21Å
22T80.1Confident84.1Confident52 Ų52110.8 Ų110.832%0.31958%0.584SS.*Hα-helixtrans-61.2-40.3173.8-58.50000111.8H18 P19 A20 K26H18-T22 PolarHBondContact O-N 3.46Å; H18-T22 PolarHBondContact O-OG1 2.96Å; P19-T22 WeakPolarHBondContact O-CB 3.34Å; P19-T22 PolarHBondContact O-N 3.37Å; A20-T22 VanDerWaalsContact C-N 3.32Å; T22-K26 WeakPolarHBondContact O-CG 3.36Å; T22-K26 PolarHBondContact O-N 3.21Å; T22-K26 VanDerWaalsContact O-N 3.12Å
23Q80.4Confident84.6Confident96 Ų96106 Ų10645%0.44957%0.57SS.*Hα-helixtrans-67.3-47178.3-174.159.633.800111.6P19 A20 Y21 A25 K26 E27P19-Q23 WeakPolarHBondContact O-CB 3.46Å; P19-Q23 PolarHBondContact O-N 2.91Å; A20-Q23 PolarHBondContact O-N 3.36Å; Y21-Q23 VanDerWaalsContact C-N 3.32Å; Y21-Q23 PolarHBondContact O-N 3.45Å; Q23-A25 VanDerWaalsContact C-N 3.32Å; Q23-A25 PolarHBondContact O-N 3.43Å; Q23-K26 PolarHBondContact O-N 3.42Å; Q23-E27 PolarHBondContact NE2-OE1 3Å; Q23-E27 PolarHBondContact O-N 2.97Å; Q23-E27 VanDerWaalsContact O-N 3.11Å
24I86.1Confident85Confident89 Ų89102.3 Ų102.346%0.45656%0.555SS.*Hα-helixtrans-60.5-43.3176.4-66.6162.1000110.6A20 Y21 K26 E27 H28A20-I24 WeakPolarHBondContact O-CD1 3.47Å; A20-I24 VanDerWaalsContact O-CG1 3.3Å; A20-I24 WeakPolarHBondContact O-CG1 3.26Å; A20-I24 PolarHBondContact O-N 3.48Å; Y21-I24 PolarHBondContact O-N 3.45Å; I24-K26 VanDerWaalsContact C-N 3.32Å; I24-K26 PolarHBondContact O-N 3.07Å; I24-E27 PolarHBondContact O-N 3.02Å; I24-H28 WeakPolarHBondContact O-CB 3.3Å; I24-H28 PolarHBondContact O-CD2 3.02Å; I24-H28 PolarHBondContact O-N 3.34Å
25A87.9Confident85.8Confident45 Ų45101.5 Ų101.537%0.37254%0.544SS..Hα-helixtrans-61.8-39.2178.700000112.4Y21 Q23 A29Y21-A25 VanDerWaalsContact O-CB 3.26Å; Y21-A25 WeakPolarHBondContact O-CB 3.47Å; Y21-A25 PolarHBondContact O-N 3.21Å; Q23-A25 VanDerWaalsContact C-N 3.32Å; Q23-A25 PolarHBondContact O-N 3.43Å; A25-A29 WeakPolarHBondContact O-CB 3.26Å; A25-A29 PolarHBondContact O-N 3.02Å
26K88.1Confident86.6Confident121 Ų121100.5 Ų100.553%0.52653%0.534SS..Hα-helixtrans-64.6-46.1175.7-74.4171.9-177.7176.50111.9T22 Q23 I24 H28 A29 L30T22-K26 WeakPolarHBondContact O-CG 3.36Å; T22-K26 PolarHBondContact O-N 3.21Å; T22-K26 VanDerWaalsContact O-N 3.12Å; Q23-K26 PolarHBondContact O-N 3.42Å; I24-K26 VanDerWaalsContact C-N 3.32Å; I24-K26 PolarHBondContact O-N 3.07Å; K26-H28 VanDerWaalsContact C-N 3.35Å; K26-A29 PolarHBondContact O-N 3.27Å; K26-L30 WeakPolarHBondContact O-CG 3.47Å; K26-L30 PolarHBondContact O-N 2.87Å
27E92.4Very high87.5Confident106 Ų10697.7 Ų97.750%0.49552%0.518SS..Hα-helixtrans-62.2-44178.4-71.5168.5-16200111.4Q23 I24 A29 L30 A31Q23-E27 PolarHBondContact NE2-OE1 3Å; Q23-E27 PolarHBondContact O-N 2.97Å; Q23-E27 VanDerWaalsContact O-N 3.11Å; I24-E27 PolarHBondContact O-N 3.02Å; E27-A29 VanDerWaalsContact C-N 3.34Å; E27-A29 PolarHBondContact O-N 3.43Å; E27-L30 PolarHBondContact O-N 3.4Å; E27-A31 PolarHBondContact O-N 2.94Å
28H93.4Very high88.5Confident120 Ų12098.6 Ų98.656%0.55652%0.517SS*.Hα-helixtrans-60.8-41.2173.1-91.1-103.3000112.7I24 K26 A31 Q32I24-H28 WeakPolarHBondContact O-CB 3.3Å; I24-H28 PolarHBondContact O-CD2 3.02Å; I24-H28 PolarHBondContact O-N 3.34Å; K26-H28 VanDerWaalsContact C-N 3.35Å; H28-A31 PolarHBondContact O-N 2.99Å; H28-Q32 WeakPolarHBondContact O-CG 3.33Å; H28-Q32 PolarHBondContact O-N 2.95Å
29A93.4Very high89.1Confident58 Ų5898.5 Ų98.548%0.47952%0.517SS..Hα-helixtrans-64-41.7178.400000111.8A25 K26 E27 Q32 A33A25-A29 WeakPolarHBondContact O-CB 3.26Å; A25-A29 PolarHBondContact O-N 3.02Å; K26-A29 PolarHBondContact O-N 3.27Å; E27-A29 VanDerWaalsContact C-N 3.34Å; E27-A29 PolarHBondContact O-N 3.43Å; A29-Q32 PolarHBondContact O-N 3.4Å; A29-A33 PolarHBondContact O-N 3.11Å
30L94.2Very high89.4Confident123 Ų123100.6 Ų100.664%0.64452%0.517SS*.Hα-helixtrans-63.3-46.8175.6-68.7172.2000111.5K26 E27 Q32 A33 E34K26-L30 WeakPolarHBondContact O-CG 3.47Å; K26-L30 PolarHBondContact O-N 2.87Å; E27-L30 PolarHBondContact O-N 3.4Å; L30-Q32 VanDerWaalsContact C-N 3.32Å; L30-Q32 PolarHBondContact O-N 3.4Å; L30-A33 PolarHBondContact O-N 3.24Å; L30-E34 PolarHBondContact O-N 3.42Å; L30-E34 VanDerWaalsContact O-N 3.07Å
31A93.6Very high89.6Confident51 Ų51104.1 Ų104.142%0.42152%0.523SS..Hα-helixtrans-60.3-41.717800000112.1E27 H28 E34 L35E27-A31 PolarHBondContact O-N 2.94Å; H28-A31 PolarHBondContact O-N 2.99Å; A31-E34 PolarHBondContact O-N 3.3Å; A31-L35 WeakPolarHBondContact O-CG 3.32Å; A31-L35 PolarHBondContact O-N 3.16Å; A31-L35 VanDerWaalsContact O-N 3.08Å
32Q93.5Very high89.1Confident121 Ų121107.3 Ų107.357%0.56555%0.548SS*.Hα-helixtrans-64.1-41.9175.6-78.4-169.949.800112.5H28 A29 L30 E34 L35 L36H28-Q32 WeakPolarHBondContact O-CG 3.33Å; H28-Q32 PolarHBondContact O-N 2.95Å; A29-Q32 PolarHBondContact O-N 3.4Å; L30-Q32 VanDerWaalsContact C-N 3.32Å; L30-Q32 PolarHBondContact O-N 3.4Å; Q32-E34 VanDerWaalsContact C-N 3.34Å; Q32-E34 PolarHBondContact O-N 2.91Å; Q32-L35 PolarHBondContact O-N 3.27Å; Q32-L36 PolarHBondContact O-N 3.03Å
33A94Very high89.6Confident62 Ų62110.1 Ų110.151%0.51256%0.56SS.*Hα-helixtrans-62.1-41.3178.400000112A29 L30 L36 K37A29-A33 PolarHBondContact O-N 3.11Å; L30-A33 PolarHBondContact O-N 3.24Å; A33-L36 PolarHBondContact O-N 3.46Å; A33-K37 WeakPolarHBondContact O-CB 3.37Å; A33-K37 PolarHBondContact O-N 3.39Å
34E94.1Very high90.1Very high108 Ų108110.8 Ų110.851%0.50557%0.566SS.*Hα-helixtrans-66.8-39.1175.3-68.6-167.3163.900113.1L30 A31 Q32 K37 R38L30-E34 PolarHBondContact O-N 3.42Å; L30-E34 VanDerWaalsContact O-N 3.07Å; A31-E34 PolarHBondContact O-N 3.3Å; Q32-E34 VanDerWaalsContact C-N 3.34Å; Q32-E34 PolarHBondContact O-N 2.91Å; E34-K37 PolarHBondContact O-N 3.17Å; E34-R38 WeakPolarHBondContact O-CG 3.42Å; E34-R38 PolarHBondContact O-N 3.3Å; E34-R38 VanDerWaalsContact O-N 3.09Å; E34-R38 IonicContact OE2-CZ 3.69Å; E34-R38 IonicContact OE2-NH1 3.48Å; E34-R38 PolarHBondContact OE2-NH1 3.37Å; E34-R38 IonicContact OE2-NH2 3.01Å; E34-R38 PolarHBondContact OE2-NH2 3.12Å
35L95.7Very high90.3Very high103 Ų103112.1 Ų112.154%0.53957%0.572SS.*Hα-helixtrans-61.9-45.2175.8-74.4173.1000111.1A31 Q32 R38 Q39A31-L35 WeakPolarHBondContact O-CG 3.32Å; A31-L35 PolarHBondContact O-N 3.16Å; A31-L35 VanDerWaalsContact O-N 3.08Å; Q32-L35 PolarHBondContact O-N 3.27Å; L35-R38 PolarHBondContact O-N 3.32Å; L35-Q39 WeakPolarHBondContact O-CG 3.5Å; L35-Q39 PolarHBondContact O-N 3.23Å
36L95.6Very high90.4Very high96 Ų96116 Ų11650%0.50358%0.584SS.*Hα-helixtrans-59.7-48.1175.1-108.886000111.4Q32 A33 R38 Q39 E40Q32-L36 PolarHBondContact O-N 3.03Å; A33-L36 PolarHBondContact O-N 3.46Å; L36-R38 PolarHBondContact O-N 3.25Å; L36-Q39 WeakPolarHBondContact O-CA 3.26Å; L36-Q39 VanDerWaalsContact O-CB 3.31Å; L36-Q39 WeakPolarHBondContact O-CB 3.03Å; L36-Q39 PolarHBondContact O-N 2.92Å; L36-E40 PolarHBondContact O-N 3.23Å; L36-E40 VanDerWaalsContact O-N 3.13Å
37K93.1Very high90.6Very high125 Ų125115.7 Ų115.754%0.54359%0.587SS.*Hα-helixtrans-56.6-40.2-179.9-171.7-176.2175.7-1690112A33 E34 Q39 E40 E41A33-K37 WeakPolarHBondContact O-CB 3.37Å; A33-K37 PolarHBondContact O-N 3.39Å; E34-K37 PolarHBondContact O-N 3.17Å; K37-Q39 VanDerWaalsContact C-N 3.29Å; K37-Q39 PolarHBondContact O-N 3.11Å; K37-E40 PolarHBondContact O-N 3.04Å; K37-E41 VanDerWaalsContact CE-OE1 3.26Å; K37-E41 WeakPolarHBondContact CE-OE1 3.39Å; K37-E41 PolarHBondContact O-N 3.44Å
38R93.3Very high90.4Very high136 Ų136116.3 Ų116.351%0.51359%0.593SS.*Hα-helixtrans-67.2-27.2175.3-69.1176.2-171111.34.3113.1E34 L35 L36E34-R38 WeakPolarHBondContact O-CG 3.42Å; E34-R38 PolarHBondContact O-N 3.3Å; E34-R38 VanDerWaalsContact O-N 3.09Å; E34-R38 IonicContact OE2-CZ 3.69Å; E34-R38 IonicContact OE2-NH1 3.48Å; E34-R38 PolarHBondContact OE2-NH1 3.37Å; E34-R38 IonicContact OE2-NH2 3.01Å; E34-R38 PolarHBondContact OE2-NH2 3.12Å; L35-R38 PolarHBondContact O-N 3.32Å; L36-R38 PolarHBondContact O-N 3.25Å
39Q90.6Very high90.2Very high139 Ų139116.1 Ų116.165%0.6560%0.596SS**Hα-helixtrans-73.4-31.8174.1-69179.4-17.900112.2L35 L36 K37 E41L35-Q39 WeakPolarHBondContact O-CG 3.5Å; L35-Q39 PolarHBondContact O-N 3.23Å; L36-Q39 WeakPolarHBondContact O-CA 3.26Å; L36-Q39 VanDerWaalsContact O-CB 3.31Å; L36-Q39 WeakPolarHBondContact O-CB 3.03Å; L36-Q39 PolarHBondContact O-N 2.92Å; K37-Q39 VanDerWaalsContact C-N 3.29Å; K37-Q39 PolarHBondContact O-N 3.11Å; Q39-E41 VanDerWaalsContact C-N 3.34Å
40E84.6Confident90Very high153 Ų153120.5 Ų120.572%0.71561%0.605SS**Hα-helixtrans-76.5-21.3179.3-64.5176.3133.700113.2L36 K37L36-E40 PolarHBondContact O-N 3.23Å; L36-E40 VanDerWaalsContact O-N 3.13Å; K37-E40 PolarHBondContact O-N 3.04Å
41E80.9Confident89.6Confident139 Ų139120.3 Ų120.365%0.6560%0.602SS**THydrogen-bonded Turntrans-85.80.6-179-71.8176.6-172.200114.2K37 Q39K37-E41 VanDerWaalsContact CE-OE1 3.26Å; K37-E41 WeakPolarHBondContact CE-OE1 3.39Å; K37-E41 PolarHBondContact O-N 3.44Å; Q39-E41 VanDerWaalsContact C-N 3.34Å
42L66.8Low89.3Confident211 Ų211126.6 Ų126.6100%1.10562%0.618SS**  trans-105.60179.2-74.3171.1000112.3

Retrieved 42 of 42 residues in 12 ms (Link to these results)