A0A087WU01_HUMAN Loading...

Secretory carrier membrane protein 4

AlphaFold DB , UniProt , Accession A0A087WU01, Species HUMAN (Homo sapiens, Human), Gene SCAMP4, Length 22 aa.

						>A0A087WU01_HUMAN|A0A087WU01|SCAMP4
MFYCATLGVNLIACLAWWIGGG
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	60.2	Low	65.9	Low	164 Å²	164	107.8 Å²	107.8	81%	0.808	60%	0.599	S	S	*	*				0	-45.7	0	-161.3	170.5	-167	113.1	Y3 C4 A5	M1-Y3 VanDerWaalsContact N-CE2 3.34Å; M1-C4 VanDerWaalsContact O-CB 3.29Å; M1-C4 PolarHBondContact O-N 3.05Å; M1-C4 WeakPolarHBondContact O-CB 3.37Å; M1-A5 PolarHBondContact O-N 3.39Å
2	F	59.6	Low	66.9	Low	180 Å²	180	109.5 Å²	109.5	79%	0.789	60%	0.604	S	S	*	*	H	α-helix	trans	-66.7	-41.7	-177.6	-138	-95.6	0	114.1	C4 A5 T6	F2-C4 PolarHBondContact O-N 3.48Å; F2-A5 PolarHBondContact O-N 3.18Å; F2-T6 WeakPolarHBondContact O-CB 3.47Å; F2-T6 PolarHBondContact O-N 3.27Å; F2-T6 VanDerWaalsContact O-N 3.09Å
3	Y	59.7	Low	67.6	Low	129 Å²	129	105.6 Å²	105.6	51%	0.506	60%	0.595	S	S	.	*	H	α-helix	trans	-65.7	-24.3	173.9	20.1	-90.7	0	112.9	M1 L7 W18	M1-Y3 VanDerWaalsContact N-CE2 3.34Å; Y3-L7 WeakPolarHBondContact O-CB 3.33Å; Y3-L7 PolarHBondContact O-N 3.09Å; Y3-W18 AromaticContact CE2-NE1 3.28Å; Y3-W18 VanDerWaalsContact CE2-NE1 3.28Å; Y3-W18 AromaticContact CZ-NE1 3.58Å; Y3-W18 VanDerWaalsContact OH-CE2 3.28Å; Y3-W18 WeakPolarHBondContact OH-CZ2 3.37Å; Y3-W18 PolarHBondContact OH-NE1 3.25Å
4	C	66.3	Low	68.3	Low	10 Å²	10	99 Å²	99	7%	0.068	56%	0.559	C	S	.	*	H	α-helix	trans	-73	-44.1	178.9	-47.1	0	0	112.2	M1 F2 V9 C14	M1-C4 VanDerWaalsContact O-CB 3.29Å; M1-C4 PolarHBondContact O-N 3.05Å; M1-C4 WeakPolarHBondContact O-CB 3.37Å; F2-C4 PolarHBondContact O-N 3.48Å; C4-V9 HydrophobicContact CB-CG2 4.36Å; C4-V9 PolarHBondContact O-N 3.43Å; C4-C14 WeakPolarHBondContact CA-SG 2.83Å; C4-C14 HydrophobicContact CB-CB 3.33Å; C4-C14 WeakPolarHBondContact CB-SG 3.29Å; C4-C14 WeakPolarHBondContact SG-CB 2.86Å; C4-C14 CovalentContact SG-SG 1.99Å; C4-C14 PolarHBondContact SG-SG 1.99Å
5	A	68.6	Low	68.8	Low	81 Å²	81	99.4 Å²	99.4	67%	0.669	56%	0.558	S	S	*	*	H	α-helix	trans	-75.3	-35.8	179.2	0	0	0	112.1	M1 F2	M1-A5 PolarHBondContact O-N 3.39Å; F2-A5 PolarHBondContact O-N 3.18Å
6	T	63.9	Low	69.4	Low	105 Å²	105	96.9 Å²	96.9	64%	0.644	55%	0.554	S	S	*	*	H	α-helix	trans	-78	-34.8	-174.7	-154.6	0	0	113.4	F2	F2-T6 WeakPolarHBondContact O-CB 3.47Å; F2-T6 PolarHBondContact O-N 3.27Å; F2-T6 VanDerWaalsContact O-N 3.09Å
7	L	65.4	Low	69.9	Low	135 Å²	135	102.1 Å²	102.1	71%	0.707	56%	0.563	S	S	*	*	T	Hydrogen-bonded Turn	trans	-91	0.6	-177.6	-127.5	82.8	0	113.1	Y3 V9	Y3-L7 WeakPolarHBondContact O-CB 3.33Å; Y3-L7 PolarHBondContact O-N 3.09Å; L7-V9 HydrophobicContact CB-CG1 4.25Å; L7-V9 HydrophobicContact CB-CG2 4.34Å; L7-V9 HydrophobicContact CD2-CG1 4.38Å; L7-V9 PolarHBondContact O-N 3.34Å
8	G	67	Low	69.9	Low	66 Å²	66	105.3 Å²	105.3	68%	0.68	57%	0.565	S	S	*	*	T	Hydrogen-bonded Turn	trans	62.5	18.3	-174.3	0	0	0	113.6	N10	G8-N10 PolarHBondContact O-N 2.85Å
9	V	68.3	Low	70.2	Confident	59 Å²	59	107.1 Å²	107.1	36%	0.358	57%	0.573	S	S	.	*			trans	-74.5	129.5	177.4	-71.7	0	0	108.8	C4 L7 L11 C14	C4-V9 HydrophobicContact CB-CG2 4.36Å; C4-V9 PolarHBondContact O-N 3.43Å; L7-V9 HydrophobicContact CB-CG1 4.25Å; L7-V9 HydrophobicContact CB-CG2 4.34Å; L7-V9 HydrophobicContact CD2-CG1 4.38Å; L7-V9 PolarHBondContact O-N 3.34Å; V9-L11 PolarHBondContact O-N 2.88Å; V9-C14 HydrophobicContact CG2-CB 4.35Å
10	N	72.9	Confident	70.5	Confident	124 Å²	124	104.9 Å²	104.9	66%	0.663	58%	0.577	S	S	*	*			trans	-41.3	127.3	-178.7	-96.6	-80.7	0	111.2	G8 I12 A13 C14	G8-N10 PolarHBondContact O-N 2.85Å; N10-I12 PolarHBondContact O-N 3.01Å; N10-A13 WeakPolarHBondContact O-CB 3.3Å; N10-A13 PolarHBondContact O-N 3.02Å; N10-A13 HydrophobicContact CB-CB 4.17Å; N10-C14 PolarHBondContact O-N 3.45Å
11	L	73.4	Confident	70.2	Confident	133 Å²	133	102.8 Å²	102.8	70%	0.696	58%	0.579	S	S	*	*	H	α-helix	trans	-48.7	-38.6	-179	-117.9	78.9	0	111.3	V9 C14 L15	V9-L11 PolarHBondContact O-N 2.88Å; L11-C14 PolarHBondContact O-N 3.28Å; L11-L15 WeakPolarHBondContact O-CB 3.08Å; L11-L15 PolarHBondContact O-N 3.34Å
12	I	77.1	Confident	70	Confident	128 Å²	128	100.5 Å²	100.5	66%	0.656	60%	0.597	S	S	*	*	H	α-helix	trans	-63.8	-47.6	176.9	-57.2	-57	0	112.7	N10 C14 L15 A16	N10-I12 PolarHBondContact O-N 3.01Å; I12-C14 PolarHBondContact O-N 2.89Å; I12-L15 PolarHBondContact O-N 3.41Å; I12-A16 WeakPolarHBondContact O-CB 3.44Å; I12-A16 PolarHBondContact O-N 3.15Å
13	A	75.8	Confident	70.5	Confident	59 Å²	59	96.5 Å²	96.5	49%	0.488	59%	0.588	S	S	.	*	H	α-helix	trans	-63	-35.5	178.6	0	0	0	111.3	N10 A16 W17	N10-A13 WeakPolarHBondContact O-CB 3.3Å; N10-A13 PolarHBondContact O-N 3.02Å; N10-A13 HydrophobicContact CB-CB 4.17Å; A13-A16 PolarHBondContact O-N 3Å; A13-W17 PolarHBondContact O-N 3.32Å
14	C	78.1	Confident	71.1	Confident	13 Å²	13	94.8 Å²	94.8	9%	0.088	59%	0.592	C	S	.	*	H	α-helix	trans	-77.3	-31.8	179.9	-134.1	0	0	113.2	C4 V9 N10 L11 I12 W18	C4-C14 WeakPolarHBondContact CA-SG 2.83Å; C4-C14 HydrophobicContact CB-CB 3.33Å; C4-C14 WeakPolarHBondContact CB-SG 3.29Å; C4-C14 WeakPolarHBondContact SG-CB 2.86Å; C4-C14 CovalentContact SG-SG 1.99Å; C4-C14 PolarHBondContact SG-SG 1.99Å; V9-C14 HydrophobicContact CG2-CB 4.35Å; N10-C14 PolarHBondContact O-N 3.45Å; L11-C14 PolarHBondContact O-N 3.28Å; I12-C14 PolarHBondContact O-N 2.89Å; C14-W18 PolarHBondContact O-N 3.43Å; C14-W18 VanDerWaalsContact O-N 3.15Å
15	L	75	Confident	71.3	Confident	105 Å²	105	99.5 Å²	99.5	55%	0.55	62%	0.621	S	S	.	*	H	α-helix	trans	-68	-41.3	169.6	-154.9	73.6	0	110.6	L11 I12 W17 W18 I19	L11-L15 WeakPolarHBondContact O-CB 3.08Å; L11-L15 PolarHBondContact O-N 3.34Å; I12-L15 PolarHBondContact O-N 3.41Å; L15-W17 PolarHBondContact O-N 3.23Å; L15-W17 VanDerWaalsContact C-N 3.31Å; L15-W18 PolarHBondContact O-N 3.39Å; L15-I19 HydrophobicContact CD2-CD1 4.35Å; L15-I19 HydrophobicContact CG-CD1 3.97Å; L15-I19 VanDerWaalsContact O-CG1 3.24Å; L15-I19 WeakPolarHBondContact O-CG1 3.24Å; L15-I19 PolarHBondContact O-N 2.81Å
16	A	79.6	Confident	71.5	Confident	60 Å²	60	100.6 Å²	100.6	50%	0.496	62%	0.619	S	S	.	*	H	α-helix	trans	-61.4	-38.1	174.9	0	0	0	112.2	I12 A13 G20	I12-A16 WeakPolarHBondContact O-CB 3.44Å; I12-A16 PolarHBondContact O-N 3.15Å; A13-A16 PolarHBondContact O-N 3Å; A16-G20 WeakPolarHBondContact O-CA 3.43Å; A16-G20 PolarHBondContact O-N 3.44Å
17	W	77.1	Confident	72	Confident	185 Å²	185	100.3 Å²	100.3	70%	0.701	62%	0.617	S	S	*	*	H	α-helix	trans	-63.8	-47.1	172.7	-168	-50.4	0	111.7	A13 L15 I19 G20 G21 G22	A13-W17 PolarHBondContact O-N 3.32Å; L15-W17 PolarHBondContact O-N 3.23Å; L15-W17 VanDerWaalsContact C-N 3.31Å; W17-I19 VanDerWaalsContact C-N 3.32Å; W17-I19 PolarHBondContact O-N 3.33Å; W17-G20 PolarHBondContact O-N 3.42Å; W17-G21 PolarHBondContact O-N 2.93Å; W17-G22 VanDerWaalsContact NE1-CA 3.27Å; W17-G22 PolarHBondContact O-N 3.27Å
18	W	69.9	Low	72.4	Confident	160 Å²	160	98 Å²	98	61%	0.606	61%	0.611	S	S	*	*	H	α-helix	trans	-62.9	-37.3	179.4	-100.5	86.7	0	113.2	Y3 C14 L15	Y3-W18 AromaticContact CE2-NE1 3.28Å; Y3-W18 VanDerWaalsContact CE2-NE1 3.28Å; Y3-W18 AromaticContact CZ-NE1 3.58Å; Y3-W18 VanDerWaalsContact OH-CE2 3.28Å; Y3-W18 WeakPolarHBondContact OH-CZ2 3.37Å; Y3-W18 PolarHBondContact OH-NE1 3.25Å; C14-W18 PolarHBondContact O-N 3.43Å; C14-W18 VanDerWaalsContact O-N 3.15Å; L15-W18 PolarHBondContact O-N 3.39Å
19	I	75.3	Confident	72.8	Confident	138 Å²	138	100.3 Å²	100.3	71%	0.708	61%	0.606	S	S	*	*	H	α-helix	trans	-80.5	-34.7	179	-60.3	166.9	0	111	L15 W17 G21	L15-I19 HydrophobicContact CD2-CD1 4.35Å; L15-I19 HydrophobicContact CG-CD1 3.97Å; L15-I19 VanDerWaalsContact O-CG1 3.24Å; L15-I19 WeakPolarHBondContact O-CG1 3.24Å; L15-I19 PolarHBondContact O-N 2.81Å; W17-I19 VanDerWaalsContact C-N 3.32Å; W17-I19 PolarHBondContact O-N 3.33Å; I19-G21 PolarHBondContact O-N 3.22Å
20	G	75.9	Confident	73.1	Confident	64 Å²	64	103.5 Å²	103.5	66%	0.66	63%	0.625	S	S	*	*	H	α-helix	trans	-75	-6.1	-179.2	0	0	0	114.9	A16 W17	A16-G20 WeakPolarHBondContact O-CA 3.43Å; A16-G20 PolarHBondContact O-N 3.44Å; W17-G20 PolarHBondContact O-N 3.42Å
21	G	65.1	Low	73.1	Confident	60 Å²	60	101.8 Å²	101.8	62%	0.619	62%	0.622	S	S	*	*			trans	73.4	93.6	-175.3	0	0	0	110.7	W17 I19	W17-G21 PolarHBondContact O-N 2.93Å; I19-G21 PolarHBondContact O-N 3.22Å
22	G	55.5	Low	73.1	Confident	116 Å²	116	98.9 Å²	98.9	100%	1.196	62%	0.615	S	S	*	*			trans	-63.5	0	157.9	0	0	0	111.5	W17	W17-G22 VanDerWaalsContact NE1-CA 3.27Å; W17-G22 PolarHBondContact O-N 3.27Å

Retrieved 22 of 22 residues in 9.1 ms (Link to these results)

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