A0A087WU04_HUMAN Loading...

T cell receptor alpha joining 36 AlphaSync

AlphaFold DB , UniProt , Accession A0A087WU04, Species HUMAN (Homo sapiens, Human), Gene TRAJ36, Length 20 aa.

						>A0A087WU04_HUMAN|A0A087WU04|TRAJ36
XQTGANNLFFGTGTRLTVIP
					

Structure Viewer

Loading PAE data...

(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	65	Low	79.9	Confident	122 Å²	122	130.3 Å²	130.3	100%	1.258	79%	0.791	S	S	*	*				0	125.6	0	0	0	0	0	0	108	T3	G1-T3 PolarHBondContact O-N 3.49Å; G1-T3 VanDerWaalsContact O-N 3.13Å
2	Q	68.2	Low	81.4	Confident	203 Å²	203	132.4 Å²	132.4	95%	0.949	81%	0.805	S	S	*	*			trans	-76.8	95.8	172.6	-65.9	-173	84.2	0	0	107.1	G4	Q2-G4 PolarHBondContact O-N 2.9Å
3	T	69.6	Low	82.5	Confident	138 Å²	138	126.5 Å²	126.5	85%	0.847	79%	0.786	S	S	*	*			trans	-73.9	79.3	167.3	-45	0	0	0	0	106.3	X1 A5	G1-T3 PolarHBondContact O-N 3.49Å; G1-T3 VanDerWaalsContact O-N 3.13Å; T3-A5 PolarHBondContact O-N 3.04Å; T3-A5 VanDerWaalsContact O-N 3.16Å
4	G	72.6	Confident	83.5	Confident	49 Å²	49	127.4 Å²	127.4	51%	0.505	79%	0.791	S	S	.	*			trans	-53.4	122.7	171.3	0	0	0	0	0	107.7	Q2 N6	Q2-G4 PolarHBondContact O-N 2.9Å; G4-N6 PolarHBondContact O-N 2.78Å
5	A	75.1	Confident	84.4	Confident	76 Å²	76	133.5 Å²	133.5	63%	0.628	79%	0.794	S	S	*	*			trans	-60.2	104.4	-179.7	0	0	0	0	0	108.2	T3 N7	T3-A5 PolarHBondContact O-N 3.04Å; T3-A5 VanDerWaalsContact O-N 3.16Å; A5-N7 PolarHBondContact O-N 3.16Å
6	N	81.8	Confident	85.2	Confident	158 Å²	158	134.8 Å²	134.8	85%	0.845	79%	0.794	S	S	*	*			trans	-72.2	49.7	174.7	-68.7	-30	0	0	0	110.1	G4 L8	G4-N6 PolarHBondContact O-N 2.78Å; N6-L8 PolarHBondContact O-N 3.27Å
7	N	83	Confident	85.9	Confident	107 Å²	107	131.7 Å²	131.7	57%	0.572	78%	0.777	S	S	*	*	P	Polyproline II helix	trans	-76.9	117.9	-173.1	-69.9	-0.2	0	0	0	108.4	A5 F9	A5-N7 PolarHBondContact O-N 3.16Å; N7-F9 HydrophobicContact CB-CE2 3.9Å; N7-F9 HydrophobicContact CB-CZ 4.09Å
8	L	88.3	Confident	86.5	Confident	140 Å²	140	131.3 Å²	131.3	73%	0.733	78%	0.776	S	S	*	*	P	Polyproline II helix	trans	-87.1	124.3	168.4	-62.4	176	0	0	0	108.2	N6 F10	N6-L8 PolarHBondContact O-N 3.27Å; L8-F10 HydrophobicContact CB-CE2 3.94Å; L8-F10 HydrophobicContact CB-CZ 4.15Å; L8-F10 HydrophobicContact CD1-CZ 4.32Å
9	F	88.8	Confident	86.9	Confident	184 Å²	184	131.9 Å²	131.9	81%	0.807	77%	0.774	S	S	*	*	P	Polyproline II helix	trans	-103.6	125.8	170.8	-62.3	-84.6	0	0	0	108.6	N7	N7-F9 HydrophobicContact CB-CE2 3.9Å; N7-F9 HydrophobicContact CB-CZ 4.09Å
10	F	93	Very high	87.2	Confident	183 Å²	183	134.9 Å²	134.9	80%	0.803	80%	0.797	S	S	*	*	P	Polyproline II helix	trans	-99.6	141.3	176.4	-64.4	-83.6	0	0	0	110	L8	L8-F10 HydrophobicContact CB-CE2 3.94Å; L8-F10 HydrophobicContact CB-CZ 4.15Å; L8-F10 HydrophobicContact CD1-CZ 4.32Å
11	G	94.2	Very high	87.2	Confident	73 Å²	73	134.9 Å²	134.9	75%	0.753	80%	0.797	S	S	*	*			trans	-75.6	-177.4	169	0	0	0	0	0	111.9	G13	G11-G13 PolarHBondContact O-N 3.13Å
12	T	96.9	Very high	88.3	Confident	156 Å²	156	135.6 Å²	135.6	96%	0.957	77%	0.773	S	S	*	*			trans	-66.3	-6.9	179.1	54.5	0	0	0	0	114.4
13	G	96.3	Very high	89.5	Confident	55 Å²	55	131.8 Å²	131.8	57%	0.567	76%	0.763	S	S	*	*			trans	72.9	-175.8	-172.9	0	0	0	0	0	113	G11	G11-G13 PolarHBondContact O-N 3.13Å
14	T	96.9	Very high	90.6	Very high	139 Å²	139	131.5 Å²	131.5	85%	0.853	76%	0.758	S	S	*	*			trans	-137.2	135.4	176.3	-63.9	0	0	0	0	108.2	L16	T14-L16 PolarHBondContact O-N 2.91Å
15	R	96.5	Very high	91.8	Very high	220 Å²	220	136.6 Å²	136.6	83%	0.83	77%	0.774	S	S	*	*			trans	-83.4	115.1	173.1	-175.5	179.6	179.2	-147.4	-0.7	109.1
16	L	96.5	Very high	92.9	Very high	153 Å²	153	140.7 Å²	140.7	80%	0.801	78%	0.784	S	S	*	*			trans	-97.4	126.6	169.2	-178.3	62.6	0	0	0	109.1	T14	T14-L16 PolarHBondContact O-N 2.91Å
17	T	97.2	Very high	93.7	Very high	83 Å²	83	139.4 Å²	139.4	51%	0.509	78%	0.78	S	S	.	*			trans	-115.3	122.7	173.1	-55.4	0	0	0	0	108.1	I19	T17-I19 HydrophobicContact CG2-CG1 4.3Å
18	V	96.8	Very high	94.5	Very high	125 Å²	125	141.9 Å²	141.9	76%	0.758	80%	0.796	S	S	*	*			trans	-97.2	125.2	171.4	-178.3	0	0	0	0	107.8
19	I	95	Very high	95	Very high	143 Å²	143	142.1 Å²	142.1	73%	0.733	80%	0.801	S	S	*	*			trans	-107.2	124.8	172.2	-58.1	174.5	0	0	0	105.5	T17	T17-I19 HydrophobicContact CG2-CG1 4.3Å
20	P	92	Very high	95.6	Very high	191 Å²	191	138.3 Å²	138.3	100%	1.24	80%	0.8	S	S	*	*			trans	-63.1	0	178.6	28.9	-35.2	0	0	0	112.2

Retrieved 20 of 20 residues in 13.7 ms (Link to these results)

U.S. Privacy Notice - Disclaimer / Registrations / Copyright Statement - Linking Policy - Notice of Privacy Practices (HIPAA) - Notice of Non‑Discrimination
© Copyright 2026 St. Jude Children's Research Hospital, a not-for-profit, section 501(c)(3).