A0A087WUB7_HUMAN Loading...

NBPF member 3

AlphaFold DB , UniProt , Accession A0A087WUB7, Species HUMAN (Homo sapiens, Human), Gene NBPF3, Length 53 aa.

						>A0A087WUB7_HUMAN|A0A087WUB7|NBPF3
MPLTPTVQGFQWTLRGPDVETSPFGAPRAASHGVGRHQELRDPTGSLGRSPNH
					

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(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	64.8	Low	72.9	Confident	231 Å²	231	145.7 Å²	145.7	100%	1.138	81%	0.807	S	S	*	*				0	128.4	0	-66.4	-177.7	162.3	0	0	107.5	L3	M1-L3 PolarHBondContact O-N 3.14Å
2	P	69.1	Low	72.8	Confident	124 Å²	124	148.9 Å²	148.9	81%	0.805	80%	0.798	S	S	*	*			trans	-75.1	123.8	179.6	30.5	-29	0	0	0	108.9	T4	P2-T4 PolarHBondContact O-N 3.42Å; P2-T4 VanDerWaalsContact O-N 3.14Å
3	L	71.1	Confident	73.2	Confident	173 Å²	173	146.8 Å²	146.8	91%	0.906	79%	0.794	S	S	*	*			trans	-77.2	94.1	173.3	-71.7	158.9	0	0	0	107.4	M1 P5	M1-L3 PolarHBondContact O-N 3.14Å; L3-P5 WeakPolarHBondContact O-CD 3.34Å
4	T	75	Confident	72.2	Confident	121 Å²	121	146.4 Å²	146.4	74%	0.742	79%	0.79	S	S	*	*			trans	-62.3	120.5	169.6	26.6	0	0	0	0	108.9	P2 T6	P2-T4 PolarHBondContact O-N 3.42Å; P2-T4 VanDerWaalsContact O-N 3.14Å; T4-T6 PolarHBondContact O-N 3.16Å; T4-T6 VanDerWaalsContact O-N 3.16Å
5	P	66.3	Low	72.3	Confident	114 Å²	114	151.5 Å²	151.5	74%	0.74	79%	0.793	S	S	*	*			trans	-69.7	114.5	176	26.8	-31.1	0	0	0	108.9	L3 V7	L3-P5 WeakPolarHBondContact O-CD 3.34Å; P5-V7 PolarHBondContact O-N 3.44Å; P5-V7 VanDerWaalsContact O-N 3.08Å
6	T	72.3	Confident	71.9	Confident	125 Å²	125	144.9 Å²	144.9	77%	0.767	77%	0.773	S	S	*	*			trans	-68.5	104.3	172.3	-60	0	0	0	0	108.5	T4 Q8	T4-T6 PolarHBondContact O-N 3.16Å; T4-T6 VanDerWaalsContact O-N 3.16Å; T6-Q8 HydrophobicContact CG2-CG 4.36Å; T6-Q8 PolarHBondContact O-N 3.43Å; T6-Q8 VanDerWaalsContact O-N 3.14Å
7	V	72.5	Confident	71.1	Confident	130 Å²	130	143.4 Å²	143.4	79%	0.788	77%	0.773	S	S	*	*			trans	-76	101.7	171.3	-178.9	0	0	0	0	107.6	P5 G9	P5-V7 PolarHBondContact O-N 3.44Å; P5-V7 VanDerWaalsContact O-N 3.08Å; V7-G9 PolarHBondContact O-N 3.12Å; V7-G9 VanDerWaalsContact O-N 3.12Å
8	Q	76.7	Confident	70.4	Confident	179 Å²	179	143.4 Å²	143.4	84%	0.836	77%	0.773	S	S	*	*			trans	-71.5	104.2	169	-70.8	-178.9	-27.5	0	0	107.7	T6 F10	T6-Q8 HydrophobicContact CG2-CG 4.36Å; T6-Q8 PolarHBondContact O-N 3.43Å; T6-Q8 VanDerWaalsContact O-N 3.14Å; Q8-F10 PolarHBondContact O-N 3.08Å
9	G	77.5	Confident	69.6	Low	55 Å²	55	141.2 Å²	141.2	57%	0.567	77%	0.765	S	S	*	*	P	Polyproline II helix	trans	-59	134	-179.5	0	0	0	0	0	111.2	V7 Q11	V7-G9 PolarHBondContact O-N 3.12Å; V7-G9 VanDerWaalsContact O-N 3.12Å; G9-Q11 PolarHBondContact O-N 3.14Å
10	F	78.7	Confident	68.8	Low	180 Å²	180	142.3 Å²	142.3	79%	0.789	76%	0.764	S	S	*	*	P	Polyproline II helix	trans	-73.2	122.8	174.1	-172.6	-101.7	0	0	0	109.6	Q8 W12	Q8-F10 PolarHBondContact O-N 3.08Å; F10-W12 HydrophobicContact CE1-CB 4.01Å; F10-W12 HydrophobicContact CD1-CB 4.34Å
11	Q	78.4	Confident	68.1	Low	171 Å²	171	139.7 Å²	139.7	80%	0.799	75%	0.754	S	S	*	*	P	Polyproline II helix	trans	-94.6	118.7	174.8	-67.4	-66.9	-58.5	0	0	108.8	G9	G9-Q11 PolarHBondContact O-N 3.14Å
12	W	71.4	Confident	67.4	Low	184 Å²	184	132 Å²	132	70%	0.697	72%	0.723	S	S	*	*			trans	-114.3	144	169.5	61.3	-90.5	0	0	0	109.9	F10 L14	F10-W12 HydrophobicContact CE1-CB 4.01Å; F10-W12 HydrophobicContact CD1-CB 4.34Å; W12-L14 HydrophobicContact CE3-CD1 4.4Å; W12-L14 HydrophobicContact CZ3-CB 4.02Å; W12-L14 HydrophobicContact CZ3-CD1 3.77Å
13	T	77.3	Confident	66.8	Low	121 Å²	121	131.9 Å²	131.9	74%	0.742	72%	0.722	S	S	*	*			trans	-118.2	123.4	174.4	-50.9	0	0	0	0	107.4	R15	T13-R15 PolarHBondContact O-N 3.01Å
14	L	60.1	Low	66.3	Low	141 Å²	141	133.2 Å²	133.2	74%	0.738	72%	0.72	S	S	*	*			trans	-70.1	102.7	168.4	-145.9	86.5	0	0	0	107.2	W12 G16	W12-L14 HydrophobicContact CE3-CD1 4.4Å; W12-L14 HydrophobicContact CZ3-CB 4.02Å; W12-L14 HydrophobicContact CZ3-CD1 3.77Å; L14-G16 PolarHBondContact O-N 3.26Å
15	R	72.8	Confident	65.6	Low	224 Å²	224	129.2 Å²	129.2	85%	0.845	70%	0.704	S	S	*	*			trans	-73.1	113.1	163.8	-62.1	-167.9	-174	-169.9	2.3	105.6	T13	T13-R15 PolarHBondContact O-N 3.01Å
16	G	65.7	Low	65.4	Low	45 Å²	45	128.3 Å²	128.3	46%	0.464	71%	0.705	S	S	.	*			trans	-53	158	170.3	0	0	0	0	0	109.6	L14 D18	L14-G16 PolarHBondContact O-N 3.26Å; G16-D18 PolarHBondContact O-N 3.05Å
17	P	59.6	Low	64.6	Low	120 Å²	120	127.1 Å²	127.1	78%	0.779	70%	0.7	S	S	*	*			trans	-52.7	123.1	173.5	25.3	-32.1	0	0	0	106.4	V19	P17-V19 VanDerWaalsContact C-N 3.31Å; P17-V19 PolarHBondContact O-N 2.99Å
18	D	58.5	Low	63.9	Low	144 Å²	144	132.6 Å²	132.6	77%	0.77	71%	0.707	S	S	*	*			trans	-42.5	101.8	175.6	-98.3	-71.7	0	0	0	107.8	G16 E20	G16-D18 PolarHBondContact O-N 3.05Å; D18-E20 PolarHBondContact O-N 2.94Å
19	V	55.1	Low	63.3	Low	101 Å²	101	127.7 Å²	127.7	61%	0.612	70%	0.697	S	S	*	*			trans	-79.8	56.2	165.9	150.1	0	0	0	0	105.4	P17 T21	P17-V19 VanDerWaalsContact C-N 3.31Å; P17-V19 PolarHBondContact O-N 2.99Å; V19-T21 HydrophobicContact CG1-CG2 3.74Å; V19-T21 PolarHBondContact O-N 2.83Å
20	E	52.9	Low	62.4	Low	163 Å²	163	129.1 Å²	129.1	76%	0.762	70%	0.703	S	S	*	*			trans	-71.2	76.9	139	-71.2	-64.1	114.5	0	0	104.4	D18 S22	D18-E20 PolarHBondContact O-N 2.94Å; E20-S22 VanDerWaalsContact C-N 3.26Å; E20-S22 PolarHBondContact O-N 2.72Å
21	T	53.9	Low	61.4	Low	88 Å²	88	125.7 Å²	125.7	54%	0.54	70%	0.701	S	S	.	*			trans	-55.3	100.3	164.2	37	0	0	0	0	106.2	V19	V19-T21 HydrophobicContact CG1-CG2 3.74Å; V19-T21 PolarHBondContact O-N 2.83Å
22	S	50.3	Low	60.4	Low	70 Å²	70	125.7 Å²	125.7	49%	0.49	70%	0.701	S	S	.	*			trans	-44.9	124.2	162.2	171.8	0	0	0	0	107.4	E20 F24 G25	E20-S22 VanDerWaalsContact C-N 3.26Å; E20-S22 PolarHBondContact O-N 2.72Å; S22-F24 PolarHBondContact O-N 3.49Å; S22-F24 PolarHBondContact OG-N 2.9Å; S22-G25 PolarHBondContact O-N 3.23Å
23	P	57.1	Low	59.5	Low	120 Å²	120	120.3 Å²	120.3	78%	0.779	70%	0.702	S	S	*	*	T	Hydrogen-bonded Turn	trans	-64.1	-4.4	-178.3	24.1	-31.7	0	0	0	112.9
24	F	61.2	Low	58.6	Low	201 Å²	201	120.9 Å²	120.9	88%	0.882	71%	0.706	S	S	*	*	T	Hydrogen-bonded Turn	trans	-129.3	16.6	179.1	-73.3	-76.5	0	0	0	115.3	S22	S22-F24 PolarHBondContact O-N 3.49Å; S22-F24 PolarHBondContact OG-N 2.9Å
25	G	58.4	Low	58.5	Low	38 Å²	38	117.4 Å²	117.4	39%	0.392	70%	0.704	S	S	.	*	S	Bend	trans	-152.8	119.5	179.6	0	0	0	0	0	113	S22	S22-G25 PolarHBondContact O-N 3.23Å
26	A	62.1	Low	57.9	Low	94 Å²	94	116.5 Å²	116.5	78%	0.777	70%	0.7	S	S	*	*			trans	-50.8	140.4	175.4	0	0	0	0	0	110.9	R28	A26-R28 PolarHBondContact O-N 3.17Å
27	P	57.3	Low	57.6	Low	101 Å²	101	121.7 Å²	121.7	66%	0.656	71%	0.712	S	S	*	*			trans	-57	117.1	178.5	21.5	-30.1	0	0	0	108.3	A29	P27-A29 VanDerWaalsContact C-N 3.34Å; P27-A29 PolarHBondContact O-N 2.88Å
28	R	57.8	Low	57.6	Low	244 Å²	244	123.5 Å²	123.5	92%	0.921	71%	0.71	S	S	*	*			trans	-67.2	101.2	174.8	-173.8	171.8	-173.7	146.7	0.3	106.1	A26 A30	A26-R28 PolarHBondContact O-N 3.17Å; R28-A30 PolarHBondContact O-N 2.76Å
29	A	62.5	Low	57.6	Low	77 Å²	77	123.6 Å²	123.6	64%	0.636	71%	0.706	S	S	*	*			trans	-49.5	114.8	165.8	0	0	0	0	0	106.3	P27 S31	P27-A29 VanDerWaalsContact C-N 3.34Å; P27-A29 PolarHBondContact O-N 2.88Å; A29-S31 PolarHBondContact O-N 2.93Å
30	A	58.8	Low	57.9	Low	84 Å²	84	126.2 Å²	126.2	69%	0.694	72%	0.716	S	S	*	*			trans	-65.9	85.5	162	0	0	0	0	0	104.7	R28 H32	R28-A30 PolarHBondContact O-N 2.76Å; A30-H32 PolarHBondContact O-N 3Å; A30-H32 PolarHBondContact O-ND1 2.74Å; A30-H32 VanDerWaalsContact O-ND1 3.17Å
31	S	57.8	Low	58.4	Low	108 Å²	108	129.1 Å²	129.1	76%	0.755	72%	0.72	S	S	*	*			trans	-48.8	111.5	170.4	-64.8	0	0	0	0	105.3	A29 G33	A29-S31 PolarHBondContact O-N 2.93Å; S31-G33 PolarHBondContact O-N 2.89Å
32	H	58.5	Low	58.5	Low	172 Å²	172	130.6 Å²	130.6	80%	0.796	72%	0.724	S	S	*	*			trans	-61.6	96	167	-74.7	54.2	0	0	0	104.2	A30 V34	A30-H32 PolarHBondContact O-N 3Å; A30-H32 PolarHBondContact O-ND1 2.74Å; A30-H32 VanDerWaalsContact O-ND1 3.17Å; H32-V34 HydrophobicContact CB-CG2 4.4Å; H32-V34 PolarHBondContact O-N 2.76Å
33	G	52.8	Low	59	Low	70 Å²	70	132.7 Å²	132.7	72%	0.722	74%	0.736	S	S	*	*			trans	-62.3	85.6	164.2	0	0	0	0	0	106	S31 G35	S31-G33 PolarHBondContact O-N 2.89Å; G33-G35 PolarHBondContact O-N 2.77Å
34	V	58.1	Low	58.8	Low	134 Å²	134	132 Å²	132	81%	0.812	73%	0.73	S	S	*	*			trans	-69.8	61.2	158.7	-178.1	0	0	0	0	106	H32	H32-V34 HydrophobicContact CB-CG2 4.4Å; H32-V34 PolarHBondContact O-N 2.76Å
35	G	57	Low	58.4	Low	67 Å²	67	126 Å²	126	69%	0.691	73%	0.725	S	S	*	*			trans	-106.9	51.1	174.3	0	0	0	0	0	108.1	G33	G33-G35 PolarHBondContact O-N 2.77Å
36	R	61.2	Low	58.3	Low	205 Å²	205	128.8 Å²	128.8	77%	0.774	74%	0.738	S	S	*	*			trans	-149.5	84.9	151.5	23.5	-134.3	-168.7	-178.9	4.8	106.1	Q38	R36-Q38 PolarHBondContact O-N 2.79Å
37	H	59.1	Low	57.8	Low	155 Å²	155	132.2 Å²	132.2	72%	0.718	74%	0.743	S	S	*	*			trans	-50.6	82.6	138.1	-171.7	-113.7	0	0	0	106.2	E39	H37-E39 IonicContact CE1-OE1 3.81Å; H37-E39 PolarHBondContact O-N 2.71Å
38	Q	59.8	Low	57.5	Low	158 Å²	158	131.1 Å²	131.1	74%	0.738	75%	0.75	S	S	*	*			trans	-65.8	93.2	154.3	-133.9	104.3	75.8	0	0	101.5	R36 L40	R36-Q38 PolarHBondContact O-N 2.79Å; Q38-L40 PolarHBondContact O-N 3.01Å
39	E	58.6	Low	56.9	Low	145 Å²	145	130.5 Å²	130.5	68%	0.678	75%	0.747	S	S	*	*			trans	-56.7	94.2	165.5	-160	171.4	-127.5	0	0	104.1	H37 R41	H37-E39 IonicContact CE1-OE1 3.81Å; H37-E39 PolarHBondContact O-N 2.71Å; E39-R41 PolarHBondContact O-N 3.42Å
40	L	61.7	Low	56.1	Low	157 Å²	157	132.1 Å²	132.1	82%	0.822	75%	0.754	S	S	*	*			trans	-65.8	96.1	173.9	-169.7	77.1	0	0	0	103.1	Q38 D42	Q38-L40 PolarHBondContact O-N 3.01Å; L40-D42 PolarHBondContact O-N 3.03Å
41	R	62.7	Low	56	Low	223 Å²	223	133.1 Å²	133.1	84%	0.842	75%	0.753	S	S	*	*			trans	-52.6	121.7	170.6	-97.7	-176.6	179.2	166.3	-0.1	106	E39 P43	E39-R41 PolarHBondContact O-N 3.42Å; R41-P43 WeakPolarHBondContact O-CD 3.38Å; R41-P43 VanDerWaalsContact O-N 3.07Å
42	D	56.5	Low	55.4	Low	120 Å²	120	135.4 Å²	135.4	64%	0.642	76%	0.757	S	S	*	*			trans	-49.3	117.9	173.9	-152.9	-36.9	0	0	0	107.1	L40 T44	L40-D42 PolarHBondContact O-N 3.03Å; D42-T44 PolarHBondContact O-N 2.75Å; D42-T44 WeakPolarHBondContact OD1-CB 3.38Å; D42-T44 PolarHBondContact OD1-N 2.84Å; D42-T44 PolarHBondContact OD1-OG1 2.92Å
43	P	59.5	Low	54.6	Low	114 Å²	114	139.5 Å²	139.5	74%	0.74	78%	0.776	S	S	*	*	S	Bend	trans	-67.2	-1.9	179.5	27.3	-32.6	0	0	0	111.5	R41 G45	R41-P43 WeakPolarHBondContact O-CD 3.38Å; R41-P43 VanDerWaalsContact O-N 3.07Å; P43-G45 PolarHBondContact O-N 2.83Å
44	T	54.4	Low	54.7	Low	105 Å²	105	143 Å²	143	64%	0.644	78%	0.779	S	S	*	*			trans	-74.1	44.4	172.9	-37.6	0	0	0	0	111.9	D42 S46	D42-T44 PolarHBondContact O-N 2.75Å; D42-T44 WeakPolarHBondContact OD1-CB 3.38Å; D42-T44 PolarHBondContact OD1-N 2.84Å; D42-T44 PolarHBondContact OD1-OG1 2.92Å; T44-S46 VanDerWaalsContact C-N 3.27Å
45	G	52.7	Low	54.6	Low	76 Å²	76	143.5 Å²	143.5	78%	0.784	78%	0.777	S	S	*	*	S	Bend	trans	-85.2	5.1	165.9	0	0	0	0	0	113.2	P43	P43-G45 PolarHBondContact O-N 2.83Å
46	S	55.6	Low	54.4	Low	95 Å²	95	147.7 Å²	147.7	66%	0.664	78%	0.782	S	S	*	*	S	Bend	trans	-159.5	89.2	177.3	61.1	0	0	0	0	110.8	T44	T44-S46 VanDerWaalsContact C-N 3.27Å
47	L	52.3	Low	54	Low	167 Å²	167	144.4 Å²	144.4	87%	0.874	78%	0.782	S	S	*	*	S	Bend	trans	-169.1	99.7	141.6	-100.5	156.7	0	0	0	109.1
48	G	51.2	Low	53.7	Low	77 Å²	77	143.7 Å²	143.7	79%	0.794	79%	0.786	S	S	*	*			trans	56.2	104.5	146.7	0	0	0	0	0	118
49	R	45	Very low	53.3	Low	232 Å²	232	142.7 Å²	142.7	88%	0.875	79%	0.79	S	S	*	*				168	120.7	95.6	-141.4	175.3	-168.4	-165.7	3.1	107.9	P51	R49-P51 WeakPolarHBondContact O-CD 3.36Å
50	S	44.6	Very low	52.9	Low	110 Å²	110	142.6 Å²	142.6	77%	0.769	80%	0.798	S	S	*	*			trans	-66.8	130.8	151.5	-179.2	0	0	0	0	107.5
51	P	56.1	Low	52.2	Low	105 Å²	105	141.5 Å²	141.5	68%	0.682	80%	0.796	S	S	*	*			trans	-132.2	140.5	130	34.2	-22.4	0	0	0	111.9	R49	R49-P51 WeakPolarHBondContact O-CD 3.36Å
52	N	46.6	Very low	51.4	Low	156 Å²	156	134.7 Å²	134.7	83%	0.834	79%	0.792	S	S	*	*			trans	-37.7	133.9	164.6	-62.8	-56.5	0	0	0	112.9
53	H	42.2	Very low	50.9	Low	259 Å²	259	136 Å²	136	100%	1.199	81%	0.805	S	S	*	*				-158.5	0	124.1	-151.9	-62.3	0	0	0	110.9

Retrieved 53 of 53 residues in 35.3 ms (Link to these results)

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