A0A087WUY9_HUMAN Loading...

NBPF member 3

AlphaFold DB , UniProt , Accession A0A087WUY9, Species HUMAN (Homo sapiens, Human), Gene NBPF3, Length 46 aa.

						>A0A087WUY9_HUMAN|A0A087WUY9|NBPF3
MPLTPTVQGFQWTLRGPDVETSPFGAPRAASHGVGRHQELRDPTEM
					

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(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	66.5	Low	72.3	Confident	233 Å²	233	147.6 Å²	147.6	100%	1.148	82%	0.821	S	S	*	*				0	128.4	0	-72	178.3	150.3	0	0	107.7	L3	M1-L3 PolarHBondContact O-N 3.18Å
2	P	70.1	Confident	71.5	Confident	125 Å²	125	150.4 Å²	150.4	81%	0.812	81%	0.81	S	S	*	*			trans	-74.3	125.6	178.8	30	-28.2	0	0	0	108.8	T4	P2-T4 PolarHBondContact O-N 3.43Å
3	L	71.4	Confident	71.9	Confident	174 Å²	174	147.8 Å²	147.8	91%	0.911	80%	0.802	S	S	*	*			trans	-73.7	102.4	172	-73.4	157	0	0	0	107.2	M1 P5	M1-L3 PolarHBondContact O-N 3.18Å; L3-P5 WeakPolarHBondContact O-CD 3.39Å
4	T	74.1	Confident	71.2	Confident	117 Å²	117	147.4 Å²	147.4	72%	0.718	80%	0.798	S	S	*	*			trans	-64.7	121.4	170.5	38.6	0	0	0	0	108.7	P2 T6	P2-T4 PolarHBondContact O-N 3.43Å; T4-T6 PolarHBondContact O-N 3.14Å; T4-T6 VanDerWaalsContact O-N 3.14Å
5	P	66.9	Low	71.2	Confident	114 Å²	114	151.1 Å²	151.1	74%	0.74	80%	0.796	S	S	*	*			trans	-68.3	114.8	176.7	26.4	-31.3	0	0	0	109	L3 V7	L3-P5 WeakPolarHBondContact O-CD 3.39Å; P5-V7 PolarHBondContact O-N 3.14Å; P5-V7 VanDerWaalsContact O-N 3.07Å
6	T	71.4	Confident	70.5	Confident	121 Å²	121	144.8 Å²	144.8	74%	0.742	78%	0.778	S	S	*	*			trans	-68.9	103.2	172.7	-60.8	0	0	0	0	108.6	T4 Q8	T4-T6 PolarHBondContact O-N 3.14Å; T4-T6 VanDerWaalsContact O-N 3.14Å; T6-Q8 HydrophobicContact CG2-CG 4.31Å; T6-Q8 PolarHBondContact O-N 3.47Å
7	V	72	Confident	69.8	Low	132 Å²	132	144.1 Å²	144.1	80%	0.8	78%	0.783	S	S	*	*			trans	-78.4	104.1	170.5	-178.3	0	0	0	0	107.6	P5 G9	P5-V7 PolarHBondContact O-N 3.14Å; P5-V7 VanDerWaalsContact O-N 3.07Å; V7-G9 VanDerWaalsContact O-N 3.14Å; V7-G9 PolarHBondContact O-N 3.07Å
8	Q	75.9	Confident	69.3	Low	175 Å²	175	142.8 Å²	142.8	82%	0.818	78%	0.776	S	S	*	*			trans	-73.8	101.6	169.1	-69.5	-179.7	-4.6	0	0	107.6	T6 F10	T6-Q8 HydrophobicContact CG2-CG 4.31Å; T6-Q8 PolarHBondContact O-N 3.47Å; Q8-F10 PolarHBondContact O-N 3.41Å
9	G	74.8	Confident	68.7	Low	66 Å²	66	140.2 Å²	140.2	68%	0.68	77%	0.765	S	S	*	*	P	Polyproline II helix	trans	-59	132.3	175.6	0	0	0	0	0	110.3	V7 Q11	V7-G9 VanDerWaalsContact O-N 3.14Å; V7-G9 PolarHBondContact O-N 3.07Å; G9-Q11 PolarHBondContact O-N 3.24Å
10	F	76.1	Confident	68	Low	184 Å²	184	141.1 Å²	141.1	81%	0.807	76%	0.763	S	S	*	*	P	Polyproline II helix	trans	-78.4	119.1	173.5	-172.6	-100.9	0	0	0	109.2	Q8 W12	Q8-F10 PolarHBondContact O-N 3.41Å; F10-W12 HydrophobicContact CD1-CB 4.3Å; F10-W12 HydrophobicContact CE1-CB 4.01Å
11	Q	76	Confident	67.4	Low	183 Å²	183	138.7 Å²	138.7	86%	0.855	75%	0.754	S	S	*	*	P	Polyproline II helix	trans	-89.9	118.7	171.2	-74.8	-158.6	-23	0	0	109.7	G9	G9-Q11 PolarHBondContact O-N 3.24Å
12	W	63.2	Low	66.6	Low	181 Å²	181	130.6 Å²	130.6	69%	0.686	72%	0.72	S	S	*	*			trans	-109.1	146.4	167.5	59.2	-95.7	0	0	0	109.8	F10 L14	F10-W12 HydrophobicContact CD1-CB 4.3Å; F10-W12 HydrophobicContact CE1-CB 4.01Å; W12-L14 HydrophobicContact CE3-CD1 4.48Å; W12-L14 HydrophobicContact CZ3-CG 3.51Å; W12-L14 VanDerWaalsContact CZ3-CD1 3.45Å; W12-L14 HydrophobicContact CZ3-CD1 3.45Å; W12-L14 HydrophobicContact CZ3-CB 4.1Å; W12-L14 HydrophobicContact CH2-CG 4.43Å; W12-L14 HydrophobicContact CH2-CD1 3.92Å; W12-L14 HydrophobicContact CE3-CG 4.11Å
13	T	76.6	Confident	66.1	Low	116 Å²	116	130.5 Å²	130.5	71%	0.712	72%	0.719	S	S	*	*			trans	-120.9	121.2	173.9	-50.7	0	0	0	0	108	R15	T13-R15 PolarHBondContact O-N 3.07Å
14	L	61.7	Low	65.6	Low	143 Å²	143	131.8 Å²	131.8	75%	0.749	72%	0.718	S	S	*	*			trans	-69.5	101	166.6	-90.4	160.1	0	0	0	107.6	W12 G16	W12-L14 HydrophobicContact CE3-CD1 4.48Å; W12-L14 HydrophobicContact CZ3-CG 3.51Å; W12-L14 VanDerWaalsContact CZ3-CD1 3.45Å; W12-L14 HydrophobicContact CZ3-CD1 3.45Å; W12-L14 HydrophobicContact CZ3-CB 4.1Å; W12-L14 HydrophobicContact CH2-CG 4.43Å; W12-L14 HydrophobicContact CH2-CD1 3.92Å; W12-L14 HydrophobicContact CE3-CG 4.11Å; L14-G16 PolarHBondContact O-N 3.43Å
15	R	71.4	Confident	65	Low	203 Å²	203	127.9 Å²	127.9	77%	0.766	70%	0.701	S	S	*	*			trans	-77.2	115.8	165.8	-64.5	-175.1	-175.1	-179.5	1.4	106.6	T13	T13-R15 PolarHBondContact O-N 3.07Å
16	G	59.7	Low	64.7	Low	49 Å²	49	126.9 Å²	126.9	51%	0.505	70%	0.702	S	S	.	*			trans	-59.3	167.9	171.3	0	0	0	0	0	111.1	L14 D18	L14-G16 PolarHBondContact O-N 3.43Å; G16-D18 PolarHBondContact O-N 2.95Å
17	P	59.1	Low	64	Low	133 Å²	133	124.6 Å²	124.6	86%	0.864	69%	0.69	S	S	*	*	S	Bend	trans	-62.6	-0.1	-176.9	26	-34.3	0	0	0	115.2
18	D	60.2	Low	63.4	Low	122 Å²	122	130 Å²	130	65%	0.652	70%	0.695	S	S	*	*			trans	-105	57.8	-178.9	-94.8	-79.1	0	0	0	112.2	G16	G16-D18 PolarHBondContact O-N 2.95Å
19	V	58.5	Low	62.7	Low	93 Å²	93	125.3 Å²	125.3	56%	0.564	69%	0.686	S	S	*	*	S	Bend	trans	-137.9	89.9	153.5	112.5	0	0	0	0	107.9
20	E	53.4	Low	62	Low	157 Å²	157	126.7 Å²	126.7	73%	0.734	69%	0.692	S	S	*	*			trans	161.3	62.6	147.8	-79.5	-44	99.5	0	0	106.2	S22	E20-S22 PolarHBondContact O-N 3.42Å
21	T	56.2	Low	61.2	Low	92 Å²	92	123.2 Å²	123.2	56%	0.564	69%	0.69	S	S	*	*			trans	-68.6	92.8	156.6	54.9	0	0	0	0	106.3	P27	T21-P27 HydrophobicContact CG2-CB 4.4Å; T21-P27 HydrophobicContact CG2-CG 4.05Å
22	S	50.8	Low	60.4	Low	63 Å²	63	122.9 Å²	122.9	44%	0.441	69%	0.688	S	S	.	*	B	Isolated β-bridge	trans	-48.8	131.3	168.1	170.2	0	0	0	0	109	E20 F24 G25	E20-S22 PolarHBondContact O-N 3.42Å; S22-F24 PolarHBondContact O-N 2.87Å; S22-F24 PolarHBondContact OG-N 3.07Å; S22-G25 PolarHBondContact O-N 3.18Å
23	P	58	Low	59.7	Low	122 Å²	122	117.4 Å²	117.4	79%	0.792	69%	0.688	S	S	*	*	T	Hydrogen-bonded Turn	trans	-64.7	-5.8	179.9	25.2	-32.1	0	0	0	113.3
24	F	62.5	Low	58.9	Low	201 Å²	201	118.7 Å²	118.7	88%	0.882	70%	0.696	S	S	*	*	T	Hydrogen-bonded Turn	trans	-127.3	13.6	176.6	-70.8	-76.7	0	0	0	114.6	S22	S22-F24 PolarHBondContact O-N 2.87Å; S22-F24 PolarHBondContact OG-N 3.07Å
25	G	60.3	Low	58.7	Low	35 Å²	35	114.7 Å²	114.7	36%	0.361	69%	0.689	S	S	.	*	B	Isolated β-bridge	trans	-158.1	124.1	179.5	0	0	0	0	0	112.2	S22	S22-G25 PolarHBondContact O-N 3.18Å
26	A	61.8	Low	58.1	Low	93 Å²	93	116 Å²	116	77%	0.769	69%	0.694	S	S	*	*			trans	-50.3	137.7	174.8	0	0	0	0	0	110.6	R28	A26-R28 PolarHBondContact O-N 2.94Å; A26-R28 VanDerWaalsContact O-N 3.07Å
27	P	56.4	Low	58	Low	74 Å²	74	121.3 Å²	121.3	48%	0.481	71%	0.705	S	S	.	*			trans	-55.7	121.4	178.3	22.5	-31.6	0	0	0	108.1	T21 A29	T21-P27 HydrophobicContact CG2-CB 4.4Å; T21-P27 HydrophobicContact CG2-CG 4.05Å; P27-A29 VanDerWaalsContact C-N 3.29Å; P27-A29 PolarHBondContact O-N 2.95Å
28	R	58	Low	57.9	Low	245 Å²	245	123.7 Å²	123.7	93%	0.925	71%	0.705	S	S	*	*			trans	-70.9	96.6	175.6	-171.5	171.7	-171.5	155	1.5	106.1	A26 A30	A26-R28 PolarHBondContact O-N 2.94Å; A26-R28 VanDerWaalsContact O-N 3.07Å; R28-A30 PolarHBondContact O-N 2.86Å
29	A	62.6	Low	57.8	Low	76 Å²	76	124.6 Å²	124.6	63%	0.628	71%	0.705	S	S	*	*			trans	-47.3	115.5	167.3	0	0	0	0	0	106.7	P27 S31	P27-A29 VanDerWaalsContact C-N 3.29Å; P27-A29 PolarHBondContact O-N 2.95Å; A29-S31 PolarHBondContact O-N 2.78Å
30	A	59.4	Low	58	Low	96 Å²	96	127.3 Å²	127.3	79%	0.793	72%	0.716	S	S	*	*			trans	-65	90.9	164.7	0	0	0	0	0	104.6	R28 H32	R28-A30 PolarHBondContact O-N 2.86Å; A30-H32 PolarHBondContact O-N 2.79Å
31	S	59.3	Low	58.5	Low	111 Å²	111	130.4 Å²	130.4	78%	0.776	72%	0.721	S	S	*	*			trans	-50.9	108.4	173.4	-62.4	0	0	0	0	106.2	A29 G33	A29-S31 PolarHBondContact O-N 2.78Å; S31-G33 PolarHBondContact O-N 2.85Å
32	H	58.9	Low	58.7	Low	175 Å²	175	132.1 Å²	132.1	81%	0.81	73%	0.727	S	S	*	*			trans	-63.5	95	168.6	-147.9	77.1	0	0	0	104.3	A30 V34	A30-H32 PolarHBondContact O-N 2.79Å; H32-V34 PolarHBondContact O-N 2.77Å
33	G	49.7	Very low	59.4	Low	67 Å²	67	134.7 Å²	134.7	69%	0.691	74%	0.742	S	S	*	*			trans	-64.2	88.8	174.7	0	0	0	0	0	107.3	S31 G35	S31-G33 PolarHBondContact O-N 2.85Å; G33-G35 PolarHBondContact O-N 2.78Å
34	V	58.8	Low	59.5	Low	142 Å²	142	134.4 Å²	134.4	86%	0.861	74%	0.738	S	S	*	*			trans	-64	79.4	161.5	176.1	0	0	0	0	105.7	H32	H32-V34 PolarHBondContact O-N 2.77Å
35	G	56.8	Low	59.3	Low	60 Å²	60	133.9 Å²	133.9	62%	0.619	74%	0.738	S	S	*	*			trans	-159.1	53.5	-162.6	0	0	0	0	0	111.2	G33	G33-G35 PolarHBondContact O-N 2.78Å
36	R	59.3	Low	58.9	Low	231 Å²	231	144.3 Å²	144.3	87%	0.872	78%	0.781	S	S	*	*			trans	171.4	102.6	137.8	55.2	-156.8	179.1	178.4	0.1	109.3	Q38	R36-Q38 PolarHBondContact O-N 3.01Å
37	H	57.9	Low	58.7	Low	159 Å²	159	146.9 Å²	146.9	74%	0.736	78%	0.781	S	S	*	*			trans	-0	92.7	140.8	-159.9	-111	0	0	0	113.7	E39	H37-E39 VanDerWaalsContact CE1-CG 3.47Å; H37-E39 WeakPolarHBondContact CE1-CG 3.47Å; H37-E39 IonicContact CE1-OE2 3.89Å; H37-E39 WeakPolarHBondContact ND1-CB 3.47Å; H37-E39 PolarHBondContact O-N 3.2Å; H37-E39 VanDerWaalsContact O-N 3.15Å
38	Q	57	Low	58.9	Low	183 Å²	183	150.7 Å²	150.7	86%	0.855	80%	0.797	S	S	*	*			trans	-77.8	89.8	155.3	-158.7	95.2	67.8	0	0	103.8	R36 L40	R36-Q38 PolarHBondContact O-N 3.01Å; Q38-L40 PolarHBondContact O-N 3.06Å
39	E	58.9	Low	58.9	Low	141 Å²	141	145.5 Å²	145.5	66%	0.659	79%	0.79	S	S	*	*			trans	-61.2	95.1	168.6	-159.1	170.2	-174.9	0	0	106.2	H37 R41	H37-E39 VanDerWaalsContact CE1-CG 3.47Å; H37-E39 WeakPolarHBondContact CE1-CG 3.47Å; H37-E39 IonicContact CE1-OE2 3.89Å; H37-E39 WeakPolarHBondContact ND1-CB 3.47Å; H37-E39 PolarHBondContact O-N 3.2Å; H37-E39 VanDerWaalsContact O-N 3.15Å; E39-R41 VanDerWaalsContact C-N 3.33Å; E39-R41 PolarHBondContact O-N 2.83Å
40	L	62.7	Low	58.7	Low	151 Å²	151	149.6 Å²	149.6	79%	0.791	80%	0.8	S	S	*	*			trans	-67.8	102.5	165.4	-155.3	85.2	0	0	0	103.9	Q38 D42	Q38-L40 PolarHBondContact O-N 3.06Å; L40-D42 PolarHBondContact O-N 3.15Å
41	R	63.7	Low	58.7	Low	221 Å²	221	152.9 Å²	152.9	83%	0.834	80%	0.8	S	S	*	*			trans	-55.8	127.8	169.7	-82.8	-174.6	176.7	173	-2.7	107.3	E39	E39-R41 VanDerWaalsContact C-N 3.33Å; E39-R41 PolarHBondContact O-N 2.83Å
42	D	60.4	Low	58.6	Low	128 Å²	128	155.7 Å²	155.7	68%	0.684	80%	0.802	S	S	*	*			trans	-54.4	125.6	171.7	-112.1	-66.2	0	0	0	108.3	L40 T44	L40-D42 PolarHBondContact O-N 3.15Å; D42-T44 PolarHBondContact O-N 3.01Å
43	P	64.1	Low	58.6	Low	117 Å²	117	154.4 Å²	154.4	76%	0.76	80%	0.801	S	S	*	*	S	Bend	trans	-72.9	10.2	178.8	29.4	-32.8	0	0	0	112.7
44	T	61.9	Low	59.3	Low	116 Å²	116	161.1 Å²	161.1	71%	0.712	81%	0.81	S	S	*	*			trans	-111.4	40.9	-175.5	-39.5	0	0	0	0	111.7	D42	D42-T44 PolarHBondContact O-N 3.01Å
45	E	56.6	Low	59.3	Low	191 Å²	191	162.7 Å²	162.7	89%	0.893	81%	0.805	S	S	*	*			trans	-98.5	79.7	150.9	-71.9	-168.7	167.5	0	0	107.6
46	M	52.5	Low	59.5	Low	254 Å²	254	172 Å²	172	100%	1.251	82%	0.822	S	S	*	*			trans	-105.1	0	150.1	-86.5	-148.3	-54.1	0	0	108.1

Retrieved 46 of 46 residues in 59.7 ms (Link to these results)

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