A0A087WX58_HUMAN Loading...

HDGF like 2

AlphaFold DB , UniProt , Accession A0A087WX58, Species HUMAN (Homo sapiens, Human), Gene HDGFL2, Length 68 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1E51.3Low54.9Low243 Ų243149.2 Ų149.2100%1.13684%0.841SS**  0123.60-60.5-174.8106.400107.4
2E51Low54.9Low178 Ų178153.3 Ų153.383%0.83285%0.848SS**  trans-168.4131.8134.9-164.8165.5113.300106.8
3K49.6Very low55.4Low190 Ų190154.5 Ų154.583%0.82684%0.844SS**  trans-106.5129.8-175.2-58.5162.6-175.4-78.60106
4L57.1Low56Low163 Ų163148.1 Ų148.185%0.85382%0.821SS**  trans-123.798155.7-80.7125.8000107.4
5A55.6Low56.5Low102 Ų102146.8 Ų146.884%0.84382%0.822SS**  trans-77.3139.4164.800000108.6
6G56.1Low57Low68 Ų68148.2 Ų148.270%0.70182%0.82SS**  trans161.2100.2166.400000113.4
7E54.2Low57.4Low179 Ų179150.2 Ų150.284%0.83682%0.822SS**  trans68.797.5155.9-79.7165.274.300119.1
8E53.3Low57.9Low192 Ų192152.7 Ų152.790%0.89782%0.824SS**  -139.898.4119.9-110.1-174.6114.300108.1A10E8-A10 PolarHBondContact O-N 3.05Å
9L57.7Low58.3Low170 Ų170149.6 Ų149.689%0.8982%0.821SS**  trans-73.899.6167.3-64.9171000107.3
10A61.8Low58.5Low84 Ų84150.9 Ų150.969%0.69482%0.821SS**  trans-139.190.9172.300000110.5E8E8-A10 PolarHBondContact O-N 3.05Å
11G56.3Low58.7Low72 Ų72150.8 Ų150.874%0.74282%0.82SS**  trans62.694.3147.900000116.1E13G11-E13 PolarHBondContact O-N 2.79Å
12E54.7Low59.5Low198 Ų198147.6 Ų147.693%0.92580%0.802SS**  trans-57.786.9150.1-175.7170.989.900108.4A14E12-A14 PolarHBondContact O-N 3.16Å
13E61.2Low60.1Low170 Ų170144.2 Ų144.279%0.79480%0.796SS**  trans-89.684.9165.9-135-172.1119.800107.3G11G11-E13 PolarHBondContact O-N 2.79Å
14A63.7Low60.9Low64 Ų64140.5 Ų140.553%0.52979%0.794SS.*  trans-52.9137.3164.300000108.4E12 Q16E12-A14 PolarHBondContact O-N 3.16Å; A14-Q16 PolarHBondContact O-N 2.95Å
15P63.7Low61.2Low129 Ų129137.9 Ų137.984%0.83878%0.784SS**  trans-56.5111.2171.9-18.328.6000107.5E17P15-E17 PolarHBondContact O-N 2.88Å
16Q65.3Low62Low169 Ų169139.2 Ų139.279%0.7978%0.777SS**  trans-52.8114.1178.8-68.4-179.4-29.800107.4A14 K18A14-Q16 PolarHBondContact O-N 2.95Å; Q16-K18 PolarHBondContact O-N 3.33Å; Q16-K18 VanDerWaalsContact O-N 3.16Å
17E63.7Low62.8Low183 Ų183142.8 Ų142.886%0.85578%0.78SS**  trans-46.2123.3172.8-174.3178134.800107.4P15 A19P15-E17 PolarHBondContact O-N 2.88Å; E17-A19 VanDerWaalsContact C-N 3.34Å; E17-A19 PolarHBondContact O-N 2.81Å
18K65.6Low63.9Low195 Ų195138.5 Ų138.585%0.84877%0.77SS**  trans-56.9103178.35.2-91.8-180169.90106.6Q16 E20Q16-K18 PolarHBondContact O-N 3.33Å; Q16-K18 VanDerWaalsContact O-N 3.16Å; K18-E20 PolarHBondContact O-N 3.27Å
19A65.3Low65Low93 Ų93133.2 Ų133.277%0.76976%0.758SS**  trans-57.1117.8172.800000106.7E17 D21E17-A19 VanDerWaalsContact C-N 3.34Å; E17-A19 PolarHBondContact O-N 2.81Å; A19-D21 PolarHBondContact O-N 2.92Å; A19-D21 VanDerWaalsContact O-N 3.12Å
20E61.9Low65.8Low175 Ų175131.2 Ų131.282%0.81876%0.756SS**  trans-38116.6169.3-167.7172.4142.800109.1K18 K22K18-E20 PolarHBondContact O-N 3.27Å; E20-K22 VanDerWaalsContact C-N 3.26Å; E20-K22 PolarHBondContact O-N 3.12Å
21D63.9Low66.6Low150 Ų150133.9 Ų133.980%0.80276%0.763SS**  trans-60.496.7173.3-171.7-110.4000106.3A19A19-D21 PolarHBondContact O-N 2.92Å; A19-D21 VanDerWaalsContact O-N 3.12Å
22K68.2Low67.6Low175 Ų175138.6 Ų138.676%0.76177%0.772SS**  trans-57.5134.1174.1-62.2-174.6-178.6-178.70105.8E20 S24E20-K22 VanDerWaalsContact C-N 3.26Å; E20-K22 PolarHBondContact O-N 3.12Å; K22-S24 PolarHBondContact O-N 2.8Å
23P62.3Low68.8Low108 Ų108132.5 Ų132.570%0.70176%0.761SS**  trans-58117173.525.5-32.4000106.6T25P23-T25 PolarHBondContact O-N 2.83Å
24S66.2Low69.6Low112 Ų112133.2 Ų133.278%0.78377%0.765SS**  trans-67.186171560000106.8K22 D26K22-S24 PolarHBondContact O-N 2.8Å; S24-D26 PolarHBondContact O-N 2.75Å
25T65Low70Confident107 Ų107134.1 Ų134.166%0.65677%0.772SS**  trans-66.288.4159.116.60000105.6P23 L27P23-T25 PolarHBondContact O-N 2.83Å; T25-L27 HydrophobicContact CG2-CD2 4.15Å; T25-L27 PolarHBondContact O-N 2.81Å
26D72.2Confident70.4Confident130 Ų130134.2 Ų134.270%0.69577%0.77SS**  trans-65.584.9167.2-172.455.9000107.2S24 S28S24-D26 PolarHBondContact O-N 2.75Å; D26-S28 PolarHBondContact O-N 2.85Å; D26-S28 PolarHBondContact OD2-OG 3.01Å
27L72.2Confident70.8Confident144 Ų144131 Ų13175%0.75477%0.767SS**  trans-82.564.1174.3-56.7-176.8000107.6T25 A29T25-L27 HydrophobicContact CG2-CD2 4.15Å; T25-L27 PolarHBondContact O-N 2.81Å; L27-A29 PolarHBondContact O-N 3.15Å; L27-A29 VanDerWaalsContact O-N 3.15Å
28S78.2Confident71.4Confident89 Ų89131.1 Ų131.162%0.62277%0.767SS**PPolyproline II helixtrans-52.3123.2169.1-81.10000108.3D26D26-S28 PolarHBondContact O-N 2.85Å; D26-S28 PolarHBondContact OD2-OG 3.01Å
29A76.8Confident71.7Confident80 Ų80131.5 Ų131.566%0.66177%0.769SS**PPolyproline II helixtrans-65.3142.7-177.600000110L27 V31L27-A29 PolarHBondContact O-N 3.15Å; L27-A29 VanDerWaalsContact O-N 3.15Å; A29-V31 PolarHBondContact O-N 3.07Å
30P73.9Confident72Confident128 Ų128130 Ų13083%0.83176%0.763SS**PPolyproline II helixtrans-60.8118175.623.2-30.3000109.3N32P30-N32 PolarHBondContact O-N 3Å
31V78.3Confident72.1Confident141 Ų141130.3 Ų130.386%0.85576%0.764SS**PPolyproline II helixtrans-72.8120.6177.4-79.40000109.3A29 G33A29-V31 PolarHBondContact O-N 3.07Å; V31-G33 VanDerWaalsContact C-N 3.35Å; V31-G33 PolarHBondContact O-N 3.39Å
32N76.6Confident72.2Confident171 Ų171129 Ų12991%0.91477%0.767SS**  trans-76.189.4174.7-131.330.4000108.1P30 E34P30-N32 PolarHBondContact O-N 3Å; N32-E34 PolarHBondContact O-N 3.35Å
33G80.5Confident72.2Confident69 Ų69124.6 Ų124.671%0.71176%0.763SS**  trans-68.5119175.900000110.5V31 A35V31-G33 VanDerWaalsContact C-N 3.35Å; V31-G33 PolarHBondContact O-N 3.39Å; G33-A35 PolarHBondContact O-N 3.24Å
34E77.5Confident72.3Confident186 Ų186126.5 Ų126.587%0.86976%0.763SS**  trans-73.8110.1172.9-160.7173.9102.500108.7N32 T36N32-E34 PolarHBondContact O-N 3.35Å; E34-T36 PolarHBondContact O-N 2.86Å
35A73.7Confident72.5Confident83 Ų83128.1 Ų128.169%0.68676%0.762SS**  trans-78.4103.9178.200000109.6G33 S37G33-A35 PolarHBondContact O-N 3.24Å; A35-S37 PolarHBondContact O-N 3.24Å
36T70.9Confident72.6Confident130 Ų130130.4 Ų130.480%0.79876%0.763SS**  trans-74.376.8169.552.60000109.7E34 Q38E34-T36 PolarHBondContact O-N 2.86Å; T36-Q38 PolarHBondContact O-N 3.04Å
37S74.1Confident72.2Confident102 Ų102131.3 Ų131.371%0.71376%0.763SS**  trans-75.491.4173.7-68.80000109.6A35 K39A35-S37 PolarHBondContact O-N 3.24Å; S37-K39 VanDerWaalsContact C-N 3.33Å; S37-K39 PolarHBondContact O-N 2.92Å
38Q76.1Confident71.9Confident186 Ų186131.5 Ų131.587%0.86976%0.76SS**  trans-69.692.7165.2-174.5177.3-70.600108.1T36 G40T36-Q38 PolarHBondContact O-N 3.04Å; Q38-G40 VanDerWaalsContact C-N 3.28Å; Q38-G40 PolarHBondContact O-N 2.98Å
39K72.9Confident71.1Confident203 Ų203135.2 Ų135.288%0.88377%0.768SS**  trans-66.394.2163.9-80.8-153177.2-142.80107.8S37 E41S37-K39 VanDerWaalsContact C-N 3.33Å; S37-K39 PolarHBondContact O-N 2.92Å; K39-E41 PolarHBondContact O-N 3Å
40G71Confident70.3Confident62 Ų62138.6 Ų138.664%0.63977%0.77SS**  trans-62.2119.8167.700000109.6Q38Q38-G40 VanDerWaalsContact C-N 3.28Å; Q38-G40 PolarHBondContact O-N 2.98Å
41E64Low69.7Low180 Ų180135.2 Ų135.284%0.84176%0.758SS**  trans3393.4153.4-158.8165.8103.400116.8K39 A43K39-E41 PolarHBondContact O-N 3Å; E41-A43 VanDerWaalsContact C-N 3.32Å; E41-A43 PolarHBondContact O-N 3.3Å
42S66.4Low68.8Low122 Ų122140.7 Ų140.785%0.85376%0.763SS**  trans-69.891.816049.50000108.8E44S42-E44 PolarHBondContact O-N 3.21Å
43A66.7Low68.3Low83 Ų83139.9 Ų139.969%0.68676%0.759SS**  trans-66.5120.2162.900000108.3E41 D45E41-A43 VanDerWaalsContact C-N 3.32Å; E41-A43 PolarHBondContact O-N 3.3Å; A43-D45 PolarHBondContact O-N 3.28Å
44E66.3Low67.5Low149 Ų149142.4 Ų142.470%0.69677%0.765SS**  trans-37.9110.1175.4-169.2173.6112.300113.6S42 K46S42-E44 PolarHBondContact O-N 3.21Å; E44-K46 PolarHBondContact OE2-NZ 3.35Å; E44-K46 VanDerWaalsContact OE2-NZ 3.12Å; E44-K46 IonicContact OE2-NZ 3.12Å; E44-K46 PolarHBondContact OE1-NZ 3.25Å; E44-K46 WeakPolarHBondContact OE1-CE 3.35Å; E44-K46 HydrophobicContact CG-CG 3.89Å; E44-K46 HydrophobicContact CG-CD 4.01Å; E44-K46 VanDerWaalsContact CD-CE 3.46Å; E44-K46 IonicContact OE1-NZ 2.72Å
45D69.9Low67Low145 Ų145142.9 Ų142.978%0.77577%0.768SS**  trans-107.383.1163.6-169.127.8000108.6A43 E47A43-D45 PolarHBondContact O-N 3.28Å; D45-E47 VanDerWaalsContact C-N 3.3Å; D45-E47 PolarHBondContact O-N 2.98Å
46K65.9Low66.4Low155 Ų155148.1 Ų148.167%0.67478%0.778SS**  trans-80.284.6166.4-74.7171.4-175.9149.70107.3E44 H48E44-K46 PolarHBondContact OE2-NZ 3.35Å; E44-K46 VanDerWaalsContact OE2-NZ 3.12Å; E44-K46 IonicContact OE2-NZ 3.12Å; E44-K46 PolarHBondContact OE1-NZ 3.25Å; E44-K46 WeakPolarHBondContact OE1-CE 3.35Å; E44-K46 HydrophobicContact CG-CG 3.89Å; E44-K46 HydrophobicContact CG-CD 4.01Å; E44-K46 VanDerWaalsContact CD-CE 3.46Å; E44-K46 IonicContact OE1-NZ 2.72Å; K46-H48 PolarHBondContact O-N 2.82Å; K46-H48 VanDerWaalsContact O-N 3.15Å
47E64.6Low66.2Low149 Ų149144.6 Ų144.670%0.69677%0.767SS**  trans-73.6104160.5-156.8178.6-179.600108D45 E49D45-E47 VanDerWaalsContact C-N 3.3Å; D45-E47 PolarHBondContact O-N 2.98Å; E47-E49 PolarHBondContact O-N 3.2Å
48H65.4Low65.5Low149 Ų149146 Ų14669%0.6977%0.774SS**  trans-72.398.5165.3177.171.2000107.2K46K46-H48 PolarHBondContact O-N 2.82Å; K46-H48 VanDerWaalsContact O-N 3.15Å
49E62.2Low65.3Low167 Ų167148.7 Ų148.778%0.7878%0.776SS**  trans-108.9112.1163.6-144.8178.5147.600109.4E47E47-E49 PolarHBondContact O-N 3.2Å
50E60Low64.8Low151 Ų151145.3 Ų145.371%0.70678%0.777SS**  trans-56.2155.7176.8-71.5147.5116.300112.4
51G61Low64.4Low56 Ų56145.7 Ų145.758%0.57778%0.781SS**  trans91.760150.700000116.8D53G51-D53 PolarHBondContact O-N 3.15Å
52R59.9Low64.5Low256 Ų256142.9 Ų142.997%0.96678%0.781SS**  trans-74.259.3146.1-67.4-146.8-156.7-172.49110.8
53D64.4Low64.7Low154 Ų154142.5 Ų142.582%0.82478%0.779SS**  trans-130.855.4173.7-106.7-33.6000109.5G51G51-D53 PolarHBondContact O-N 3.15Å
54S64.9Low64.7Low122 Ų122146.3 Ų146.385%0.85378%0.782SS**  trans-111.641.9174.1-59.40000112.2
55E67.3Low65.1Low196 Ų196146 Ų14692%0.91679%0.785SS**  trans-121.279.5161-154.7-176.1114.500109.5
56E61.3Low65.1Low193 Ų193145.2 Ų145.290%0.90278%0.78SS**  trans-115.397.4163.8-175.8164.383.800110.2
57G65.4Low65.2Low56 Ų56146 Ų14658%0.57779%0.786SS**  trans76.8147.5151.100000118.4
58P60.8Low65Low131 Ų131150.5 Ų150.585%0.85182%0.815SS**  cis-100.4124.848.6-7.325.7000112.6C60P58-C60 PolarHBondContact O-N 2.72Å
59R70.6Confident65Low243 Ų243150.6 Ų150.692%0.91782%0.821SS**  trans-67113.7164-63.2-86.4-148.4154.67.5106.7G61R59-G61 VanDerWaalsContact C-N 3.3Å; R59-G61 PolarHBondContact O-N 3.12Å
60C63.6Low65.1Low132 Ų132149.7 Ų149.789%0.89282%0.823SS**  trans-59.796167.8-67.10000108.5P58 S62P58-C60 PolarHBondContact O-N 2.72Å; C60-S62 PolarHBondContact O-N 3.24Å
61G62.3Low65.4Low70 Ų70149.7 Ų149.772%0.72283%0.83SS**  trans-68.9111.3170.400000108.6R59 S63R59-G61 VanDerWaalsContact C-N 3.3Å; R59-G61 PolarHBondContact O-N 3.12Å; G61-S63 PolarHBondContact O-N 3.25Å
62S65.6Low65.6Low122 Ų122155.2 Ų155.285%0.85385%0.845SS**  trans-59.8113.8166-164.60000108.7C60C60-S62 PolarHBondContact O-N 3.24Å
63S70.5Confident66Low114 Ų114148.9 Ų148.980%0.79784%0.837SS**  trans-102.798164.165.40000108.5G61G61-S63 PolarHBondContact O-N 3.25Å
64E66.4Low66.1Low162 Ų162148.5 Ų148.576%0.75784%0.838SS**  trans-81111.1157.5-177145.570.400106.5L66E64-L66 HydrophobicContact CG-CB 4.47Å; E64-L66 HydrophobicContact CG-CD1 3.84Å; E64-L66 HydrophobicContact CG-CG 4.23Å
65D75.3Confident66.2Low144 Ų144150.4 Ų150.477%0.7784%0.837SS**  trans-103.6103170.7-164.9-98.7000107.3
66L69.7Low66.1Low127 Ų127146.9 Ų146.967%0.66583%0.831SS**  trans-119.666.8-179.8-105.1167.6000108.7E64E64-L66 HydrophobicContact CG-CB 4.47Å; E64-L66 HydrophobicContact CG-CD1 3.84Å; E64-L66 HydrophobicContact CG-CG 4.23Å
67H68.5Low66.5Low172 Ų172143.1 Ų143.180%0.79683%0.825SS**  trans-149.891.1167.9-66-63.3000112.4
68D59.6Low66.6Low244 Ų244151 Ų151100%1.30585%0.848SS**  -166.90113.8-145.2-104.7000110.2

Retrieved 68 of 68 residues in 58.8 ms (Link to these results)