A0A087WZ33_HUMAN Loading...

UPF3A regulator of nonsense mediated mRNA decay

AlphaFold DB , UniProt , Accession A0A087WZ33, Species HUMAN (Homo sapiens, Human), Gene UPF3A, Length 105 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M59.3Low55.7Low247 Ų247151.9 Ų151.9100%1.21788%0.876SS**  0103.50-63.2-74.9164.600107
2R60.5Low55.1Low250 Ų250159.6 Ų159.694%0.94388%0.88SS**  trans-103.9131.5174.4-61.6-174.7-177.8-176.61.5107.4
3S66.4Low54.9Low128 Ų128154.3 Ų154.390%0.89587%0.87SS**  trans-145.7116.4162.7-66.50000109.9
4E62.1Low54.5Low194 Ų194150.7 Ų150.791%0.90787%0.869SS**  trans-77-179.9160.2-84.6178.365.500111.1
5K61.7Low54.8Low183 Ų183149.7 Ų149.780%0.79687%0.866SS**  trans98.2133.4156-163.5159.3-176.8-176.60114.2
6E51.3Low54.6Low156 Ų156146.4 Ų146.473%0.72986%0.862SS**  cis-155.1160.29-155.3171.564.400108
7G50.8Low54.6Low67 Ų67143.9 Ų143.969%0.69186%0.862SS**  trans-98.1147.9164.900000111.9
8A46.1Very low55.2Low103 Ų103149.6 Ų149.685%0.85187%0.865SS**  trans-177.6134.3146.700000111.4
9G47.9Very low55.2Low85 Ų85145.4 Ų145.488%0.87686%0.858SS**  trans88109.4136.700000117.5
10G50.6Low55.6Low75 Ų75144.5 Ų144.577%0.77386%0.856SS**  trans172.340.6163.500000117.7R12G10-R12 PolarHBondContact O-N 3.49Å; G10-R12 VanDerWaalsContact O-N 3.08Å
11L56Low55.2Low183 Ų183142.7 Ų142.796%0.95885%0.851SS**  trans-64105.2161.6-82.8148.5000108.5
12R48.2Very low55.2Low244 Ų244134.1 Ų134.192%0.92183%0.826SS**  trans-108.598.3160.6-84.5-163.8170.2-97.4-0109.6G10 A14G10-R12 PolarHBondContact O-N 3.49Å; G10-R12 VanDerWaalsContact O-N 3.08Å; R12-A14 PolarHBondContact O-N 2.96Å
13A52.8Low55.1Low91 Ų91131.9 Ų131.975%0.75282%0.818SS**  trans-56.1121.616600000110.3V15A13-V15 PolarHBondContact O-N 3.47Å
14A49.7Very low54.7Low104 Ų104134.2 Ų134.286%0.8681%0.814SS**  trans-83.198.4160.400000107.6R12R12-A14 PolarHBondContact O-N 2.96Å
15V58.5Low54.4Low135 Ų135132.8 Ų132.882%0.81881%0.805SS**  trans-87.4107.7165.846.70000107.7A13A13-V15 PolarHBondContact O-N 3.47Å
16A52.1Low54Low98 Ų98131 Ų13181%0.8180%0.804SS**  trans-120.9121.6163.300000108
17A55Low54.1Low103 Ų103128.9 Ų128.985%0.85181%0.806SS**  trans-65.6133.6-163.300000113.2
18R65Low54Low246 Ų246129 Ų12993%0.92880%0.801SS**  trans-130.186.3161.9-169.8176.1162.8166.6-3.5107.6
19G55Low54.7Low70 Ų70131.5 Ų131.572%0.72280%0.798SS**  trans-102.9114.9174.600000110.4S21G19-S21 PolarHBondContact O-N 3.14Å
20P63.3Low54.9Low127 Ų127134.2 Ų134.283%0.82579%0.789SS**  trans-79.299.316031-26.6000107.7G22P20-G22 PolarHBondContact O-N 2.97Å
21S47.7Very low55.4Low107 Ų107135 Ų13575%0.74878%0.778SS**  trans-83.276.7171.5-173.60000108.9G19 R23G19-S21 PolarHBondContact O-N 3.14Å; S21-R23 PolarHBondContact O-N 3.1Å; S21-R23 VanDerWaalsContact O-N 3.11Å
22G59Low55.1Low67 Ų67133.6 Ų133.669%0.69177%0.766SS**  trans-67.298.3161.500000107.9P20 E24P20-G22 PolarHBondContact O-N 2.97Å; G22-E24 VanDerWaalsContact C-N 3.26Å; G22-E24 PolarHBondContact O-N 3.22Å; G22-E24 VanDerWaalsContact O-N 3.14Å
23R57Low55.3Low204 Ų204130.7 Ų130.777%0.7776%0.761SS**  trans-84.781.9168.3-64.8-167.385-128.98.3108.1S21 K25S21-R23 PolarHBondContact O-N 3.1Å; S21-R23 VanDerWaalsContact O-N 3.11Å; R23-K25 PolarHBondContact O-N 2.68Å; R23-K25 VanDerWaalsContact O-N 3.15Å
24E59.6Low55.6Low177 Ų177133.7 Ų133.783%0.82776%0.759SS**  trans-66.5102.2158.2-52.2-160.9106.700106.8G22 L26G22-E24 VanDerWaalsContact C-N 3.26Å; G22-E24 PolarHBondContact O-N 3.22Å; G22-E24 VanDerWaalsContact O-N 3.14Å; E24-L26 PolarHBondContact O-N 2.66Å
25K55.4Low56.2Low164 Ų164140 Ų14071%0.71376%0.761SS**  trans-96.782.2165.9-150.2179.9-177.2-151.40106.9R23 S27R23-K25 PolarHBondContact O-N 2.68Å; R23-K25 VanDerWaalsContact O-N 3.15Å; K25-S27 PolarHBondContact O-N 3.49Å
26L52.8Low55.2Low146 Ų146137.5 Ų137.576%0.76474%0.743SS**  trans-53.8134.3161.3-69.9169.9000108.1E24 A28E24-L26 PolarHBondContact O-N 2.66Å; L26-A28 PolarHBondContact O-N 2.95Å
27S53.6Low55.3Low111 Ų111138.6 Ų138.678%0.77674%0.744SS**  trans-29.898.4171.551.10000113K25 L29K25-S27 PolarHBondContact O-N 3.49Å; S27-L29 VanDerWaalsContact C-N 3.3Å; S27-L29 PolarHBondContact O-N 3.37Å; S27-L29 VanDerWaalsContact O-N 3.15Å
28A49.8Very low55Low70 Ų70140.4 Ų140.458%0.57974%0.735SS**  trans-68.7104.9144.800000104.4L26 E30L26-A28 PolarHBondContact O-N 2.95Å; A28-E30 HydrophobicContact CB-CG 4.31Å; A28-E30 PolarHBondContact O-N 3.47Å
29L59.3Low54.2Low154 Ų154137.4 Ų137.481%0.80673%0.732SS**  trans-56.177150.8-175.688.5000105.8S27 V31S27-L29 VanDerWaalsContact C-N 3.3Å; S27-L29 PolarHBondContact O-N 3.37Å; S27-L29 VanDerWaalsContact O-N 3.15Å; L29-V31 HydrophobicContact CD2-CG2 4.25Å; L29-V31 HydrophobicContact CG-CG2 4.47Å; L29-V31 PolarHBondContact O-N 3.29Å
30E52.8Low53.5Low143 Ų143143.6 Ų143.667%0.66874%0.742SS**  trans-62.398.4163.1-84.4-170.190.500104.1A28 Q32A28-E30 HydrophobicContact CB-CG 4.31Å; A28-E30 PolarHBondContact O-N 3.47Å; E30-Q32 PolarHBondContact O-N 2.93Å
31V61.6Low52.6Low90 Ų90146 Ų14655%0.54574%0.742SS.*  trans-58.296.3161.8176.80000104.6L29 F33L29-V31 HydrophobicContact CD2-CG2 4.25Å; L29-V31 HydrophobicContact CG-CG2 4.47Å; L29-V31 PolarHBondContact O-N 3.29Å; V31-F33 HydrophobicContact CB-CD2 4.35Å; V31-F33 HydrophobicContact CB-CE2 4.15Å; V31-F33 HydrophobicContact CG1-CD2 3.7Å; V31-F33 HydrophobicContact CG1-CE1 4.47Å; V31-F33 HydrophobicContact CG1-CE2 3.41Å; V31-F33 VanDerWaalsContact CG1-CE2 3.41Å; V31-F33 HydrophobicContact CG1-CG 4.36Å; V31-F33 HydrophobicContact CG1-CZ 3.84Å; V31-F33 PolarHBondContact O-N 3.02Å
32Q49.7Very low52.6Low154 Ų154145.1 Ų145.172%0.7274%0.741SS**  trans-60.178.8169.3-68.8-83.594.200106.9E30 H34E30-Q32 PolarHBondContact O-N 2.93Å; Q32-H34 PolarHBondContact O-N 3.34Å
33F51.7Low51.8Low184 Ų184150.4 Ų150.481%0.80775%0.748SS**  trans-65.886.1152.4-71.3-76.9000104.7V31 R35V31-F33 HydrophobicContact CB-CD2 4.35Å; V31-F33 HydrophobicContact CB-CE2 4.15Å; V31-F33 HydrophobicContact CG1-CD2 3.7Å; V31-F33 HydrophobicContact CG1-CE1 4.47Å; V31-F33 HydrophobicContact CG1-CE2 3.41Å; V31-F33 VanDerWaalsContact CG1-CE2 3.41Å; V31-F33 HydrophobicContact CG1-CG 4.36Å; V31-F33 HydrophobicContact CG1-CZ 3.84Å; V31-F33 PolarHBondContact O-N 3.02Å; F33-R35 PolarHBondContact O-N 3.31Å
34H58.9Low51Low153 Ų153146.6 Ų146.671%0.70875%0.748SS**  trans-55.379.6175.6-178.9-75.3000108.7Q32 D36Q32-H34 PolarHBondContact O-N 3.34Å; H34-D36 VanDerWaalsContact C-N 3.28Å; H34-D36 PolarHBondContact CE1-O 3.06Å
35R62.4Low50.4Low237 Ų237144.4 Ų144.489%0.89475%0.749SS**  trans-103.155.6166.7-168.8167.466.1-170.80.3107.3F33F33-R35 PolarHBondContact O-N 3.31Å
36D37.3Very low49.8Very low83 Ų83141.9 Ų141.944%0.44475%0.749SS.*  trans-118.390.2158.9-169.9-103.8000106.8H34 Q38H34-D36 VanDerWaalsContact C-N 3.28Å; H34-D36 PolarHBondContact CE1-O 3.06Å; D36-Q38 PolarHBondContact OD2-NE2 3.44Å
37S53.5Low49.5Very low121 Ų121141 Ų14185%0.84675%0.75SS**  trans-92.180.8156.7-63.20000106.3
38Q49.7Very low49.1Very low140 Ų140141.3 Ų141.365%0.65475%0.752SS**  trans-102.393.4158.9-82.3-176.79000109D36 Q40D36-Q38 PolarHBondContact OD2-NE2 3.44Å; Q38-Q40 PolarHBondContact O-N 3.14Å
39Q48.8Very low49.2Very low184 Ų184143.3 Ų143.386%0.8676%0.762SS**  trans40.284.8135.1-55.1-175.4-7800115.8
40Q39.9Very low49Very low199 Ų199141.4 Ų141.493%0.9376%0.762SS**  trans-117.5101.9147.2-112.8176.283.200108.5Q38 A42Q38-Q40 PolarHBondContact O-N 3.14Å; Q40-A42 PolarHBondContact O-N 3.47Å
41E44.7Very low48.3Very low178 Ų178138.4 Ų138.483%0.83277%0.769SS**  trans-54.4119.2165.4175.6-112.3116.500109.9
42A46.7Very low47.2Very low89 Ų89140.4 Ų140.474%0.73679%0.785SS**  trans-166.8105.515000000108.2Q40Q40-A42 PolarHBondContact O-N 3.47Å
43E41.9Very low47.1Very low177 Ų177137.1 Ų137.183%0.82779%0.792SS**  trans-3120.2164.1-62-175.679.300119.8
44T40.7Very low47Very low125 Ų125131.8 Ų131.877%0.76779%0.79SS**  148116.8129.847.70000110.1P46T44-P46 WeakPolarHBondContact O-CD 3.49Å
45P46.1Very low46.4Very low130 Ų130128.2 Ų128.284%0.84479%0.794SS**  trans-89114.3178.531.1-30.5000112.1
46P43.8Very low45.8Very low111 Ų111122.7 Ų122.772%0.72180%0.799SS**  trans-77.5124.2146.730.5-28.3000108.3T44 S48T44-P46 WeakPolarHBondContact O-CD 3.49Å; P46-S48 PolarHBondContact O-N 2.94Å
47T45.8Very low46.4Very low129 Ų129121.8 Ų121.879%0.79181%0.809SS**  trans-42.2123.7165.1-178.30000111
48S45.6Very low46.7Very low116 Ų116125.1 Ų125.181%0.81181%0.808SS**  trans-150.394160.4-79.80000108.1P46P46-S48 PolarHBondContact O-N 2.94Å
49S53Low46.9Very low113 Ų113124.8 Ų124.879%0.7982%0.819SS**  trans-65.3122168.946.60000110.4
50S53.9Low47.4Very low114 Ų114125.7 Ų125.780%0.79781%0.814SS**  trans-149.872.7142.561.40000109C52S50-C52 PolarHBondContact O-N 3.15Å
51G39.3Very low48.4Very low79 Ų79125.5 Ų125.581%0.81481%0.813SS**  trans-73.7109.516700000109.3G53G51-G53 PolarHBondContact O-N 3.46Å
52C38.7Very low49.2Very low133 Ų133123.7 Ų123.790%0.89981%0.805SS**  trans-86.787.9156.1-68.80000107.4S50 G54S50-C52 PolarHBondContact O-N 3.15Å; C52-G54 PolarHBondContact O-N 3.15Å
53G46.9Very low50.1Low84 Ų84129 Ų12987%0.86681%0.811SS**  trans-64.8120.2170.900000110.7G51G51-G53 PolarHBondContact O-N 3.46Å
54G49.6Very low51.1Low73 Ų73131.5 Ų131.575%0.75381%0.813SS**  trans-133.8101163.500000107.1C52C52-G54 PolarHBondContact O-N 3.15Å
55G46.1Very low52.1Low77 Ų77131.6 Ų131.679%0.79481%0.814SS**  trans-61.6152.2-160.200000115.9G57G55-G57 VanDerWaalsContact C-N 3.32Å; G55-G57 PolarHBondContact O-N 2.51Å
56A50.7Low53.4Low121 Ų121129.6 Ų129.6100%181%0.808SS**  trans-61.791.6162.900000109.5
57G48.8Very low54.9Low64 Ų64131.4 Ų131.466%0.6681%0.811SS**  trans-122.5122.7174.100000109.5G55G55-G57 VanDerWaalsContact C-N 3.32Å; G55-G57 PolarHBondContact O-N 2.51Å
58K59.4Low56.8Low191 Ų191131.4 Ų131.483%0.8382%0.816SS**  trans-32.4149.5165.5-35.6175.4-172.1-178.90111.6R60K58-R60 PolarHBondContact O-N 3.16Å
59P53.8Low59Low134 Ų134133.5 Ų133.587%0.8781%0.81SS**  trans-70.476.7176.431.5-34.2000109.7E61P59-E61 PolarHBondContact O-N 3.24Å
60R61Low60.7Low203 Ų203134 Ų13477%0.76681%0.809SS**  trans-64.8126.3160.5-172.2-179.6-176.9-168.40.5104.2K58 E62K58-R60 PolarHBondContact O-N 3.16Å; R60-E62 HydrophobicContact CB-CG 4.32Å; R60-E62 HydrophobicContact CG-CG 4.34Å; R60-E62 PolarHBondContact O-N 3.26Å
61E60.8Low62.5Low194 Ų194133.5 Ų133.591%0.90780%0.801SS**  trans-62.674.5166.9-76.7-179.685.400108.4P59 K63P59-E61 PolarHBondContact O-N 3.24Å; E61-K63 PolarHBondContact O-N 3.25Å; E61-K63 VanDerWaalsContact O-N 3.1Å
62E61.4Low64.9Low141 Ų141133.8 Ų133.866%0.65978%0.782SS**  trans-66.3105.9164.4-71.4174.798.700104.4R60 R64R60-E62 HydrophobicContact CB-CG 4.32Å; R60-E62 HydrophobicContact CG-CG 4.34Å; R60-E62 PolarHBondContact O-N 3.26Å; E62-R64 WeakPolarHBondContact O-CG 3.35Å; E62-R64 PolarHBondContact O-N 3.47Å
63K65.1Low67.5Low199 Ų199137.7 Ų137.787%0.86578%0.778SS**  trans-53.191.8166-55.8176.7179.1-173.40105.7E61 T65E61-K63 PolarHBondContact O-N 3.25Å; E61-K63 VanDerWaalsContact O-N 3.1Å; K63-T65 PolarHBondContact O-N 3.03Å
64R62.9Low69.5Low231 Ų231145.2 Ų145.287%0.87278%0.781SS**  trans-64.194.1-179.6-67.8-168.6-180-177.30.5105.4E62 A66E62-R64 WeakPolarHBondContact O-CG 3.35Å; E62-R64 PolarHBondContact O-N 3.47Å; R64-A66 VanDerWaalsContact C-N 3.27Å; R64-A66 PolarHBondContact O-N 3.37Å
65T62.2Low71.4Confident127 Ų127143.8 Ų143.878%0.77976%0.755SS**  trans-58.1100167.918.40000105.5K63 L67K63-T65 PolarHBondContact O-N 3.03Å; T65-L67 PolarHBondContact O-N 3.06Å; T65-L67 VanDerWaalsContact O-N 3.12Å
66A73.1Confident73.6Confident87 Ų87143.9 Ų143.972%0.71974%0.742SS**  trans-59.1119.9-179.600000107.6R64 S68R64-A66 VanDerWaalsContact C-N 3.27Å; R64-A66 PolarHBondContact O-N 3.37Å; A66-S68 PolarHBondContact O-N 2.73Å
67L75.4Confident75.3Confident149 Ų149141.3 Ų141.378%0.7872%0.715SS**  trans-72.5111.4174.4-62.1176.5000107.2T65 K69T65-L67 PolarHBondContact O-N 3.06Å; T65-L67 VanDerWaalsContact O-N 3.12Å; L67-K69 PolarHBondContact O-N 2.89Å
68S85.4Confident77.1Confident129 Ų129141.1 Ų141.190%0.90271%0.713SS**SBendtrans-76.4-7.7178.9-49.40000113.5A66A66-S68 PolarHBondContact O-N 2.73Å
69K90.8Very high78.5Confident160 Ų160133 Ų13370%0.69668%0.678SS**  trans-122.3124.9178.4-175.6171.3-177.2171.10110.8L67L67-K69 PolarHBondContact O-N 2.89Å
70V89.9Confident80.3Confident124 Ų124129 Ų12975%0.75265%0.652SS**  trans-111.4138.1174.7-177.50000108.8
71V92.1Very high81.7Confident104 Ų104123.1 Ų123.163%0.6363%0.632SS**  trans-122.3123.1175.21790000108.8R73V71-R73 HydrophobicContact CG1-CG 4.09Å
72I89.6Confident83.2Confident84 Ų84119.8 Ų119.843%0.43162%0.616SS.*  trans-101.5126.9176.4-53.9175.6000108.2L75 L88I72-L75 HydrophobicContact CG2-CD2 3.68Å; I72-L75 HydrophobicContact CG2-CG 4.22Å; I72-L88 HydrophobicContact CD1-CD1 4.25Å; I72-L88 HydrophobicContact CD1-CD2 4.22Å
73R92Very high84.6Confident215 Ų215117.9 Ų117.981%0.81161%0.608SS**  trans-118161.9-178.4-59.3-178.374173.32.4110.2V71V71-R73 HydrophobicContact CG1-CG 4.09Å
74R90.3Very high85.8Confident243 Ų243109.1 Ų109.192%0.91757%0.57SS**SBendtrans63.241-179.2-52.4176.361.4-126.5-1.2113
75L89.8Confident87.1Confident42 Ų42100.1 Ų100.122%0.2254%0.538CS..  trans-68.4144.9172.3-65.5166.1000109.4I72 L79 L84 F99I72-L75 HydrophobicContact CG2-CD2 3.68Å; I72-L75 HydrophobicContact CG2-CG 4.22Å; L75-L79 HydrophobicContact CB-CD2 4.25Å; L75-L79 HydrophobicContact CD2-CD2 3.78Å; L75-L79 HydrophobicContact CG-CD2 4.47Å; L75-L84 HydrophobicContact CD1-CD2 4.01Å; L75-L84 HydrophobicContact CD2-CD1 4.02Å; L75-L84 HydrophobicContact CD2-CD2 4.3Å; L75-F99 HydrophobicContact CD1-CD2 4.05Å; L75-F99 HydrophobicContact CD1-CE2 3.62Å; L75-F99 HydrophobicContact CD1-CZ 4.44Å
76P90.5Very high88.5Confident79 Ų7999.5 Ų99.551%0.51353%0.526SS..  trans-54.7139.6173.3-23.231.9000110.8G78 L79P76-G78 PolarHBondContact O-N 3.32Å; P76-L79 HydrophobicContact CB-CB 4.17Å; P76-L79 HydrophobicContact CG-CB 4.45Å; P76-L79 WeakPolarHBondContact O-CB 3.47Å; P76-L79 PolarHBondContact O-N 3.11Å
77P87.1Confident89.3Confident68 Ų68102.1 Ų102.144%0.44252%0.524SS..THydrogen-bonded Turntrans-69.2-15.9-17623.8-32.4000114.8L104P77-L104 HydrophobicContact CB-CD1 3.89Å; P77-L104 HydrophobicContact CB-CD2 3.25Å; P77-L104 HydrophobicContact CB-CG 3.44Å; P77-L104 VanDerWaalsContact CB-CG 3.44Å; P77-L104 HydrophobicContact CG-CD1 4.39Å; P77-L104 HydrophobicContact CG-CD2 3.44Å; P77-L104 VanDerWaalsContact CG-CD2 3.44Å; P77-L104 HydrophobicContact CG-CG 4.13Å
78G86Confident90Very high60 Ų6097.8 Ų97.862%0.61950%0.501SS*.THydrogen-bonded Turntrans-95.83.317100000113.7P76P76-G78 PolarHBondContact O-N 3.32Å
79L89.1Confident90Very high19 Ų1998.9 Ų98.910%0.09949%0.485CS..  trans-74.6140.1178.3-164.372.5000109.4L75 P76 Q83 L84 F99L75-L79 HydrophobicContact CB-CD2 4.25Å; L75-L79 HydrophobicContact CD2-CD2 3.78Å; L75-L79 HydrophobicContact CG-CD2 4.47Å; P76-L79 HydrophobicContact CB-CB 4.17Å; P76-L79 HydrophobicContact CG-CB 4.45Å; P76-L79 WeakPolarHBondContact O-CB 3.47Å; P76-L79 PolarHBondContact O-N 3.11Å; L79-Q83 HydrophobicContact CD1-CB 3.86Å; L79-L84 HydrophobicContact CD2-CB 3.98Å; L79-L84 HydrophobicContact CD2-CD1 3.98Å; L79-L84 HydrophobicContact CD2-CG 4.42Å; L79-L84 HydrophobicContact CG-CB 4.5Å; L79-F99 HydrophobicContact CB-CZ 4.22Å; L79-F99 HydrophobicContact CD2-CE2 4.14Å; L79-F99 HydrophobicContact CG-CE2 4.39Å; L79-F99 HydrophobicContact CG-CZ 4.49Å; L79-F99 WeakPolarHBondContact O-CE1 3.09Å; L79-F99 WeakPolarHBondContact O-CZ 3.36Å
80T92.6Very high89.9Confident52 Ų5297.5 Ų97.532%0.31949%0.492SS..  trans-109.9161.1177.253.90000110.1E82 Q83 L84T80-E82 VanDerWaalsContact C-N 3.26Å; T80-E82 WeakPolarHBondContact CB-OE2 3.48Å; T80-E82 PolarHBondContact O-N 3.08Å; T80-Q83 PolarHBondContact O-N 3.4Å; T80-Q83 WeakPolarHBondContact OG1-CB 3.44Å; T80-Q83 WeakPolarHBondContact OG1-CG 3.47Å; T80-Q83 PolarHBondContact OG1-N 2.78Å; T80-Q83 PolarHBondContact OG1-NE2 2.89Å; T80-L84 PolarHBondContact O-N 2.74Å
81K90.8Very high89.5Confident78 Ų7894.4 Ų94.434%0.33947%0.471SS..Hα-helixtrans-54.8-44.8177.6-178.6177.6179.1-74.30111L84 E85 F97 F99K81-L84 PolarHBondContact O-N 2.81Å; K81-E85 WeakPolarHBondContact CE-OE1 3.47Å; K81-E85 WeakPolarHBondContact CG-OE1 3.39Å; K81-E85 IonicContact NZ-OE1 3.67Å; K81-E85 PolarHBondContact NZ-OE1 3.46Å; K81-E85 WeakPolarHBondContact O-CG 3.3Å; K81-E85 PolarHBondContact O-N 3.38Å; K81-F97 HydrophobicContact CG-CD1 4.32Å; K81-F97 HydrophobicContact CG-CE1 3.93Å; K81-F99 HydrophobicContact CB-CB 3.72Å; K81-F99 HydrophobicContact CB-CD1 4.22Å; K81-F99 HydrophobicContact CB-CG 3.99Å; K81-F99 HydrophobicContact CD-CB 4.29Å; K81-F99 HydrophobicContact CG-CB 3.79Å
82E90.7Very high89.2Confident124 Ų12494.4 Ų94.458%0.57947%0.473SS*.Hα-helixtrans-67.7-41.4-176.7-58.268.7-141.900111.6T80 L84 E85 E86T80-E82 VanDerWaalsContact C-N 3.26Å; T80-E82 WeakPolarHBondContact CB-OE2 3.48Å; T80-E82 PolarHBondContact O-N 3.08Å; E82-L84 VanDerWaalsContact C-N 3.33Å; E82-E85 PolarHBondContact O-N 3.38Å; E82-E86 WeakPolarHBondContact O-CB 3.18Å; E82-E86 PolarHBondContact O-N 3.49Å
83Q92.5Very high89Confident102 Ų10295.6 Ų95.648%0.47750%0.496SS..Hα-helixtrans-64.4-40.2175.3-78.6174.362.800111.6L79 T80 E86 Q87L79-Q83 HydrophobicContact CD1-CB 3.86Å; T80-Q83 PolarHBondContact O-N 3.4Å; T80-Q83 WeakPolarHBondContact OG1-CB 3.44Å; T80-Q83 WeakPolarHBondContact OG1-CG 3.47Å; T80-Q83 PolarHBondContact OG1-N 2.78Å; T80-Q83 PolarHBondContact OG1-NE2 2.89Å; Q83-E86 PolarHBondContact O-N 3.2Å; Q83-Q87 WeakPolarHBondContact O-CB 3.38Å; Q83-Q87 WeakPolarHBondContact O-CG 3.44Å; Q83-Q87 PolarHBondContact O-N 3.26Å
84L89.9Confident88.7Confident15 Ų1589.9 Ų89.98%0.07948%0.478CS..Hα-helixtrans-64.9-44.1176.4-176.362.3000111.1L75 L79 T80 K81 E82 E86 Q87 L88 F97 F99L75-L84 HydrophobicContact CD1-CD2 4.01Å; L75-L84 HydrophobicContact CD2-CD1 4.02Å; L75-L84 HydrophobicContact CD2-CD2 4.3Å; L79-L84 HydrophobicContact CD2-CB 3.98Å; L79-L84 HydrophobicContact CD2-CD1 3.98Å; L79-L84 HydrophobicContact CD2-CG 4.42Å; L79-L84 HydrophobicContact CG-CB 4.5Å; T80-L84 PolarHBondContact O-N 2.74Å; K81-L84 PolarHBondContact O-N 2.81Å; E82-L84 VanDerWaalsContact C-N 3.33Å; L84-E86 PolarHBondContact O-N 3.12Å; L84-Q87 PolarHBondContact O-N 2.66Å; L84-L88 HydrophobicContact CD1-CD1 4.04Å; L84-L88 HydrophobicContact CD1-CG 4.19Å; L84-L88 HydrophobicContact CD2-CD1 4.47Å; L84-L88 HydrophobicContact CG-CD1 3.82Å; L84-L88 HydrophobicContact CG-CG 4.39Å; L84-L88 WeakPolarHBondContact O-CB 3.46Å; L84-L88 WeakPolarHBondContact O-CG 3.42Å; L84-L88 PolarHBondContact O-N 3.13Å; L84-F97 HydrophobicContact CB-CZ 4.44Å; L84-F97 HydrophobicContact CD2-CZ 3.8Å; L84-F97 HydrophobicContact CG-CZ 4Å; L84-F99 HydrophobicContact CB-CD2 4.3Å; L84-F99 HydrophobicContact CB-CE2 4.3Å; L84-F99 HydrophobicContact CD2-CD2 3.6Å; L84-F99 HydrophobicContact CD2-CE2 3.92Å
85E90Very high88.7Confident42 Ų4286.6 Ų86.620%0.19648%0.479CS..Hα-helixtrans-59.9-45.2176.5-74.3177.5-15800112K81 E82 Q87 L88 R89 F97K81-E85 WeakPolarHBondContact CE-OE1 3.47Å; K81-E85 WeakPolarHBondContact CG-OE1 3.39Å; K81-E85 IonicContact NZ-OE1 3.67Å; K81-E85 PolarHBondContact NZ-OE1 3.46Å; K81-E85 WeakPolarHBondContact O-CG 3.3Å; K81-E85 PolarHBondContact O-N 3.38Å; E82-E85 PolarHBondContact O-N 3.38Å; E85-Q87 VanDerWaalsContact C-N 3.35Å; E85-Q87 PolarHBondContact O-N 3.08Å; E85-L88 PolarHBondContact O-N 2.86Å; E85-R89 WeakPolarHBondContact O-CG 3.13Å; E85-R89 PolarHBondContact O-N 2.77Å; E85-R89 VanDerWaalsContact O-N 3.16Å; E85-F97 HydrophobicContact CG-CD1 3.83Å; E85-F97 HydrophobicContact CG-CE1 3.37Å; E85-F97 HydrophobicContact CG-CE2 4.35Å; E85-F97 HydrophobicContact CG-CG 4.48Å; E85-F97 HydrophobicContact CG-CZ 3.66Å; E85-F97 VanDerWaalsContact OE1-CD1 3.3Å; E85-F97 WeakPolarHBondContact OE1-CD1 3.32Å; E85-F97 WeakPolarHBondContact OE1-CE1 3.5Å
86E92.1Very high88.7Confident113 Ų11391.9 Ų91.953%0.52850%0.497SS..Hα-helixtrans-63-41.5179.4-17161.7-159.700111.7E82 Q83 L84 L88 R89E82-E86 WeakPolarHBondContact O-CB 3.18Å; E82-E86 PolarHBondContact O-N 3.49Å; Q83-E86 PolarHBondContact O-N 3.2Å; L84-E86 PolarHBondContact O-N 3.12Å; E86-L88 VanDerWaalsContact C-N 3.31Å; E86-L88 PolarHBondContact O-N 3.32Å; E86-R89 WeakPolarHBondContact O-CB 3.18Å; E86-R89 PolarHBondContact O-N 3.36Å; E86-R89 IonicContact OE2-CZ 3.32Å; E86-R89 VanDerWaalsContact OE2-CZ 3.32Å; E86-R89 IonicContact OE2-NE 2.68Å; E86-R89 IonicContact OE2-NH1 2.66Å; E86-R89 PolarHBondContact OE2-NH1 3.35Å
87Q89.9Confident88.7Confident143 Ų14390.5 Ų90.567%0.66848%0.483SS*.Hα-helixtrans-68.9-29.5177.6-74.1-175.7-3400113.5Q83 L84 E85 R89Q83-Q87 WeakPolarHBondContact O-CB 3.38Å; Q83-Q87 WeakPolarHBondContact O-CG 3.44Å; Q83-Q87 PolarHBondContact O-N 3.26Å; L84-Q87 PolarHBondContact O-N 2.66Å; E85-Q87 VanDerWaalsContact C-N 3.35Å; E85-Q87 PolarHBondContact O-N 3.08Å; Q87-R89 VanDerWaalsContact C-N 3.29Å
88L88.5Confident88.9Confident57 Ų5792.2 Ų92.230%0.29849%0.485SS..Hα-helixtrans-80.7-12.8177.6-69172.4000112I72 L84 E85 E86 P90 L91 F97I72-L88 HydrophobicContact CD1-CD1 4.25Å; I72-L88 HydrophobicContact CD1-CD2 4.22Å; L84-L88 HydrophobicContact CD1-CD1 4.04Å; L84-L88 HydrophobicContact CD1-CG 4.19Å; L84-L88 HydrophobicContact CD2-CD1 4.47Å; L84-L88 HydrophobicContact CG-CD1 3.82Å; L84-L88 HydrophobicContact CG-CG 4.39Å; L84-L88 WeakPolarHBondContact O-CB 3.46Å; L84-L88 WeakPolarHBondContact O-CG 3.42Å; L84-L88 PolarHBondContact O-N 3.13Å; E85-L88 PolarHBondContact O-N 2.86Å; E86-L88 VanDerWaalsContact C-N 3.31Å; E86-L88 PolarHBondContact O-N 3.32Å; L88-P90 CarbonylContact O-C 3.32Å; L88-L91 HydrophobicContact CB-CD1 3.43Å; L88-L91 VanDerWaalsContact CB-CD1 3.43Å; L88-L91 HydrophobicContact CB-CD2 3.87Å; L88-L91 HydrophobicContact CB-CG 3.52Å; L88-L91 HydrophobicContact CD1-CD1 4.13Å; L88-L91 HydrophobicContact CD1-CD2 4.29Å; L88-L91 HydrophobicContact CG-CD1 4.44Å; L88-L91 WeakPolarHBondContact O-CG 3.49Å; L88-L91 PolarHBondContact O-N 2.84Å; L88-F97 HydrophobicContact CD1-CE2 3.69Å; L88-F97 HydrophobicContact CD1-CZ 4.12Å
89R86.4Confident89.2Confident153 Ų15391.1 Ų91.158%0.57746%0.463SS*.  trans-64.7138177.8-77.3175.2-170.3171.80.1111.5E85 E86 Q87E85-R89 WeakPolarHBondContact O-CG 3.13Å; E85-R89 PolarHBondContact O-N 2.77Å; E85-R89 VanDerWaalsContact O-N 3.16Å; E86-R89 WeakPolarHBondContact O-CB 3.18Å; E86-R89 PolarHBondContact O-N 3.36Å; E86-R89 IonicContact OE2-CZ 3.32Å; E86-R89 VanDerWaalsContact OE2-CZ 3.32Å; E86-R89 IonicContact OE2-NE 2.68Å; E86-R89 IonicContact OE2-NH1 2.66Å; E86-R89 PolarHBondContact OE2-NH1 3.35Å; Q87-R89 VanDerWaalsContact C-N 3.29Å
90P88.4Confident89.1Confident130 Ų13097.6 Ų97.684%0.84449%0.491SS*.SBendcis-80.5112.3-130.2-31.6000112.2L88L88-P90 CarbonylContact O-C 3.32Å
91L81.2Confident88.7Confident59 Ų5998.1 Ų98.131%0.30950%0.501SS..PPolyproline II helixtrans-74.6135.4170.6-87.5153.8000108.3L88L88-L91 HydrophobicContact CB-CD1 3.43Å; L88-L91 VanDerWaalsContact CB-CD1 3.43Å; L88-L91 HydrophobicContact CB-CD2 3.87Å; L88-L91 HydrophobicContact CB-CG 3.52Å; L88-L91 HydrophobicContact CD1-CD1 4.13Å; L88-L91 HydrophobicContact CD1-CD2 4.29Å; L88-L91 HydrophobicContact CG-CD1 4.44Å; L88-L91 WeakPolarHBondContact O-CG 3.49Å; L88-L91 PolarHBondContact O-N 2.84Å
92P85.2Confident87.8Confident104 Ų10497.5 Ų97.568%0.67551%0.51SS*.PPolyproline II helixtrans-53.7161.3165.5-22.132.7000111.2H94P92-H94 PolarHBondContact O-N 2.69Å; P92-H94 VanDerWaalsContact O-N 3.08Å; P92-H94 PolarHBondContact O-ND1 3.1Å
93A86Confident86.8Confident110 Ų11098.9 Ų98.991%0.90952%0.522SS*.PPolyproline II helixtrans-53.6120.2170.800000109.3
94H86.4Confident85.5Confident94 Ų94100.5 Ų100.544%0.43553%0.533SS..  trans-130.2132-176.954.4-84000109.1P92 Y96P92-H94 PolarHBondContact O-N 2.69Å; P92-H94 VanDerWaalsContact O-N 3.08Å; P92-H94 PolarHBondContact O-ND1 3.1Å; H94-Y96 VanDerWaalsContact C-N 3.31Å
95D88.9Confident84.1Confident174 Ų174114.7 Ų114.793%0.9359%0.585SS**SBendtrans-80.1-15.6-178.9-52.4-82.4000112.7
96Y89.9Confident83.9Confident154 Ų154118.3 Ų118.360%0.60461%0.605SS**  trans-149130.8-173.8-168.1-97.3000112.6H94 E98H94-Y96 VanDerWaalsContact C-N 3.31Å; Y96-E98 HydrophobicContact CE1-CB 3.63Å; Y96-E98 PolarHBondContact OH-OE2 2.91Å
97F91.3Very high83.4Confident50 Ų50118.6 Ų118.622%0.21961%0.609CS.*  trans-143.3122171.9-172.3-89.9000110.2K81 L84 E85 L88K81-F97 HydrophobicContact CG-CD1 4.32Å; K81-F97 HydrophobicContact CG-CE1 3.93Å; L84-F97 HydrophobicContact CB-CZ 4.44Å; L84-F97 HydrophobicContact CD2-CZ 3.8Å; L84-F97 HydrophobicContact CG-CZ 4Å; E85-F97 HydrophobicContact CG-CD1 3.83Å; E85-F97 HydrophobicContact CG-CE1 3.37Å; E85-F97 HydrophobicContact CG-CE2 4.35Å; E85-F97 HydrophobicContact CG-CG 4.48Å; E85-F97 HydrophobicContact CG-CZ 3.66Å; E85-F97 VanDerWaalsContact OE1-CD1 3.3Å; E85-F97 WeakPolarHBondContact OE1-CD1 3.32Å; E85-F97 WeakPolarHBondContact OE1-CE1 3.5Å; L88-F97 HydrophobicContact CD1-CE2 3.69Å; L88-F97 HydrophobicContact CD1-CZ 4.12Å
98E91.5Very high83.1Confident103 Ų103117.2 Ų117.248%0.48161%0.605SS.*  trans-136.1138.1179.2-167.6170.4-145.400110.6Y96 F100Y96-E98 HydrophobicContact CE1-CB 3.63Å; Y96-E98 PolarHBondContact OH-OE2 2.91Å; E98-F100 HydrophobicContact CB-CE2 4.38Å; E98-F100 VanDerWaalsContact CD-CZ 3.45Å; E98-F100 HydrophobicContact CG-CE2 3.83Å; E98-F100 HydrophobicContact CG-CZ 3.88Å; E98-F100 WeakPolarHBondContact OE2-CZ 3.5Å
99F91.4Very high82.7Confident37 Ų37120.8 Ų120.816%0.16262%0.623CS.*  trans-116.7125.2-176.6-179.7-93.5000110.1L75 L79 K81 L84 A101L75-F99 HydrophobicContact CD1-CD2 4.05Å; L75-F99 HydrophobicContact CD1-CE2 3.62Å; L75-F99 HydrophobicContact CD1-CZ 4.44Å; L79-F99 HydrophobicContact CB-CZ 4.22Å; L79-F99 HydrophobicContact CD2-CE2 4.14Å; L79-F99 HydrophobicContact CG-CE2 4.39Å; L79-F99 HydrophobicContact CG-CZ 4.49Å; L79-F99 WeakPolarHBondContact O-CE1 3.09Å; L79-F99 WeakPolarHBondContact O-CZ 3.36Å; K81-F99 HydrophobicContact CB-CB 3.72Å; K81-F99 HydrophobicContact CB-CD1 4.22Å; K81-F99 HydrophobicContact CB-CG 3.99Å; K81-F99 HydrophobicContact CD-CB 4.29Å; K81-F99 HydrophobicContact CG-CB 3.79Å; L84-F99 HydrophobicContact CB-CD2 4.3Å; L84-F99 HydrophobicContact CB-CE2 4.3Å; L84-F99 HydrophobicContact CD2-CD2 3.6Å; L84-F99 HydrophobicContact CD2-CE2 3.92Å; F99-A101 HydrophobicContact CD1-CB 4.49Å; F99-A101 HydrophobicContact CE1-CB 3.81Å
100F88Confident82.5Confident155 Ų155118.8 Ų118.868%0.6863%0.626SS**  trans-109.2107.6173-64.1-82.6000108.9E98E98-F100 HydrophobicContact CB-CE2 4.38Å; E98-F100 VanDerWaalsContact CD-CZ 3.45Å; E98-F100 HydrophobicContact CG-CE2 3.83Å; E98-F100 HydrophobicContact CG-CZ 3.88Å; E98-F100 WeakPolarHBondContact OE2-CZ 3.5Å
101A82.6Confident82.1Confident64 Ų64118 Ų11853%0.52961%0.612SS.*  trans-67.5138.7170.200000109.2F99 D103F99-A101 HydrophobicContact CD1-CB 4.49Å; F99-A101 HydrophobicContact CE1-CB 3.81Å; A101-D103 PolarHBondContact O-N 3.46Å
102A73.2Confident82.2Confident65 Ų65122.2 Ų122.254%0.53763%0.633SS.*  trans-81.8113.8164.500000107.3L104A102-L104 PolarHBondContact O-N 2.65Å; A102-L104 VanDerWaalsContact O-N 3.14Å
103D69.4Low81.9Confident152 Ų152123.6 Ų123.681%0.81363%0.63SS**  trans-54.2120.8169.8-75.9-53.5000109A101 R105A101-D103 PolarHBondContact O-N 3.46Å; D103-R105 PolarHBondContact O-N 2.67Å; D103-R105 VanDerWaalsContact O-N 3.1Å
104L65.6Low81.6Confident136 Ų136124.8 Ų124.871%0.71261%0.607SS**  trans-63.7108.2169.4-76.3164.4000107.9P77 A102P77-L104 HydrophobicContact CB-CD1 3.89Å; P77-L104 HydrophobicContact CB-CD2 3.25Å; P77-L104 HydrophobicContact CB-CG 3.44Å; P77-L104 VanDerWaalsContact CB-CG 3.44Å; P77-L104 HydrophobicContact CG-CD1 4.39Å; P77-L104 HydrophobicContact CG-CD2 3.44Å; P77-L104 VanDerWaalsContact CG-CD2 3.44Å; P77-L104 HydrophobicContact CG-CG 4.13Å; A102-L104 PolarHBondContact O-N 2.65Å; A102-L104 VanDerWaalsContact O-N 3.14Å
105R61.2Low81.2Confident313 Ų313127.5 Ų127.5100%1.18162%0.623SS**  trans-91.50165.4-76.5-165.7178.7140.91.4110.9D103D103-R105 PolarHBondContact O-N 2.67Å; D103-R105 VanDerWaalsContact O-N 3.1Å

Retrieved 105 of 105 residues in 36.2 ms (Link to these results)