A0A087WZ99_HUMAN Loading...

HDGF like 2

AlphaFold DB , UniProt , Accession A0A087WZ99, Species HUMAN (Homo sapiens, Human), Gene HDGFL2, Length 71 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1A52.4Low60.8Low149 Ų149147.5 Ų147.5100%1.23187%0.868SS**  0104.2000000105.9
2E52.4Low60.2Low195 Ų195149.8 Ų149.891%0.91186%0.864SS**  trans-95.5123.7178.3-65.9178.1100.300106.8
3S63.2Low59.7Low108 Ų108144.4 Ų144.476%0.75586%0.86SS**  trans-90110.8-178.6-60.80000109.3Q5S3-Q5 PolarHBondContact O-N 3.04Å
4E66.8Low59.5Low195 Ų195150.4 Ų150.491%0.91186%0.86SS**  trans-76112.2169.1-64.6176.7101.400108.7G6E4-G6 PolarHBondContact O-N 2.94Å
5Q65.2Low59.2Low178 Ų178145.7 Ų145.783%0.83286%0.858SS**  trans-89104.4176.6-67.1161.497.800107.7S3S3-Q5 PolarHBondContact O-N 3.04Å
6G63.9Low59.1Low74 Ų74148.9 Ų148.976%0.76386%0.862SS**  trans-71.4139.7175.400000111.8E4E4-G6 PolarHBondContact O-N 2.94Å
7W65.2Low58.8Low249 Ų249145.8 Ų145.894%0.94386%0.858SS**  trans-74.6131.7173.2-85.873.6000111.4
8D70.1Confident58.4Low134 Ų134142.1 Ų142.172%0.71786%0.855SS**  trans-95.491.8173.852.5-29.1000110.4E10D8-E10 PolarHBondContact O-N 3.17Å
9G61.7Low58.3Low80 Ų80148.1 Ų148.183%0.82586%0.861SS**  trans-71.793.9-17900000113
10E55.6Low57.8Low182 Ų182144.7 Ų144.785%0.8586%0.859SS**  trans-116.9100.3168.5-46.8-157.7147.600110.1D8D8-E10 PolarHBondContact O-N 3.17Å
11G52.8Low57.3Low79 Ų79141.5 Ų141.581%0.81486%0.857SS**  trans-122.3100.4173.900000110.7G13G11-G13 PolarHBondContact O-N 3.34Å
12E53.8Low57.2Low175 Ų175139.5 Ų139.582%0.81884%0.84SS**  trans-90.297.5173.2-67.8-169.6104.300110.8
13G53.7Low57.5Low79 Ų79133.5 Ų133.581%0.81483%0.83SS**  trans-86.8114169.600000111.5G11G11-G13 PolarHBondContact O-N 3.34Å
14R56.6Low57.3Low228 Ų228140.5 Ų140.586%0.8684%0.84SS**  trans-102.698.9166.1-66.3-174.7-174-122-1.3109.5
15G54.3Low56.1Low80 Ų80135 Ų13583%0.82584%0.836SS**PPolyproline II helixtrans-83.2119.8170.600000111
16E58Low55.4Low197 Ų197130.6 Ų130.692%0.92184%0.839SS**PPolyproline II helixtrans-85.2118.6168.5-167.7174.4131.700108.9G18E16-G18 PolarHBondContact O-N 3.38Å
17A54.4Low54.8Low97 Ų97130.5 Ų130.580%0.80284%0.838SS**PPolyproline II helixtrans-74.8122.4-176.700000111.7
18G51.5Low54.8Low78 Ų78124.6 Ų124.680%0.80483%0.831SS**PPolyproline II helixtrans-67144.617800000114.1E16 G20E16-G18 PolarHBondContact O-N 3.38Å; G18-G20 PolarHBondContact O-N 3.09Å
19R56.7Low53.8Low257 Ų257124.3 Ų124.397%0.9784%0.837SS**  trans-86.5102.1167.6-65.6-175.6-162.3-116.32.3109.4
20G47.8Very low52.9Low79 Ų79123.9 Ų123.981%0.81483%0.832SS**  trans-104.1115.5171.400000111.3G18G18-G20 PolarHBondContact O-N 3.09Å
21G48.4Very low53.2Low79 Ų79125 Ų12581%0.81484%0.837SS**PPolyproline II helixtrans-73166.3179.400000114.8
22A50Low52.8Low106 Ų106125 Ų12588%0.87684%0.837SS**PPolyproline II helixtrans-55.2140.7-16800000116
23G58.9Low52.8Low69 Ų69120.9 Ų120.971%0.71184%0.842SS**PPolyproline II helixtrans-72.3158.4170.100000113.8
24R57.8Low52.6Low255 Ų255119.9 Ų119.996%0.96283%0.832SS**  trans-179136146-100.1171-154.2-72.70.4108.7
25G42.1Very low52.3Low80 Ų80116.7 Ų116.783%0.82583%0.827SS**  trans131.789.4162.300000113.4
26G49.7Very low52.6Low86 Ų86118.1 Ų118.189%0.88783%0.831SS**  trans-76.5124.3167.600000111.2
27G51.4Low52.7Low72 Ų72116.1 Ų116.174%0.74282%0.821SS**  trans47.8173.8155.500000120.4
28P66.5Low52.8Low124 Ų124119.4 Ų119.481%0.80582%0.82SS**  cis-119.9159.1-37.535.4-21.1000110.6
29P48Very low53.4Low129 Ų129127.7 Ų127.784%0.83883%0.827SS**  trans-131.8126.8134.831.9-19.3000108.6
30G43.6Very low53.4Low70 Ų70119.2 Ų119.272%0.72281%0.807SS**  87.3101.16000000106.7
31E61.2Low54.1Low206 Ų206122.1 Ų122.196%0.96381%0.808SS**  trans-42.9134.1-179.1-73.2150.5101.700113.5
32G43.5Very low54.6Low78 Ų78126.9 Ų126.980%0.80480%0.802SS**  trans-169102.3171.900000110
33G54.2Low55.2Low89 Ų89131 Ų13192%0.91880%0.803SS**  trans-72.4165.7-158.100000118.2
34G50.5Low55.7Low59 Ų59129.5 Ų129.561%0.60879%0.788SS**  trans173115.116900000109.8
35Q49.6Very low56.2Low160 Ų160120.8 Ų120.875%0.74876%0.764SS**  trans66.890.1177.464.6-107.45.500119.2Q37Q35-Q37 HydrophobicContact CB-CB 4.28Å; Q35-Q37 HydrophobicContact CB-CG 4.35Å; Q35-Q37 PolarHBondContact O-N 3.26Å
36A60.9Low57.6Low110 Ų110120.7 Ų120.791%0.90975%0.745SS**  trans-67.577.2141.300000108.9
37Q60.7Low58.5Low156 Ų156121.4 Ų121.473%0.72973%0.727SS**  trans-139115.6169.7-65.4-172105.200109.8Q35Q35-Q37 HydrophobicContact CB-CB 4.28Å; Q35-Q37 HydrophobicContact CB-CG 4.35Å; Q35-Q37 PolarHBondContact O-N 3.26Å
38H56.8Low59.6Low166 Ų166123.8 Ų123.877%0.76972%0.723SS**  trans82.681.9175.1-66.5-133.1000115.1S40H38-S40 PolarHBondContact O-N 3.48Å
39R62.8Low59.8Low252 Ų252126.2 Ų126.295%0.95172%0.716SS**  trans-50.891.3135.7-71.8-174.9-172.6-176.22.5108.9
40S57.8Low60.5Low78 Ų78126.6 Ų126.655%0.54572%0.719SS.*  trans-142.776.5151.3-53.50000105.7H38 R42H38-S40 PolarHBondContact O-N 3.48Å; S40-R42 VanDerWaalsContact C-N 3.31Å; S40-R42 PolarHBondContact O-N 3.5Å
41V62Low61.7Low140 Ų140125.6 Ų125.685%0.84871%0.709SS**  trans-42.4110.5146.6177.70000104.3E43V41-E43 PolarHBondContact O-N 2.95Å
42R59.7Low62.2Low179 Ų179116.8 Ų116.868%0.67567%0.67SS**  trans-33.3107.6-173.5-171.3-179.9-84.7-152.1-1.2108.7S40 G44 D48S40-R42 VanDerWaalsContact C-N 3.31Å; S40-R42 PolarHBondContact O-N 3.5Å; R42-G44 PolarHBondContact O-N 3.48Å; R42-D48 IonicContact NH1-OD2 2.9Å; R42-D48 PolarHBondContact NH1-OD2 3.19Å
43E62.6Low63.9Low193 Ų193116.8 Ų116.890%0.90265%0.651SS**SBendtrans-78.747.5-168.8-165.1179.4179.800110V41V41-E43 PolarHBondContact O-N 2.95Å
44G68.9Low65.1Low38 Ų38120.8 Ų120.839%0.39264%0.639SS.*SBendtrans-158.6148.6-174.600000109.2R42 D46R42-G44 PolarHBondContact O-N 3.48Å; G44-D46 PolarHBondContact O-N 2.95Å
45P67.1Low66.5Low71 Ų71123 Ų12346%0.46163%0.633SS.*  trans-53.5139.9177.321.8-30.2000109.7L47 E56P45-L47 HydrophobicContact CB-CD2 4.22Å; P45-L47 HydrophobicContact CG-CD2 4.08Å; P45-L47 HydrophobicContact CG-CG 4.28Å; P45-L47 PolarHBondContact O-N 3.11Å; P45-E56 WeakPolarHBondContact CG-OE2 3.33Å
46D71.8Confident67.8Low79 Ų79119 Ų11942%0.42262%0.615SS.*  trans-71.973.7178.2-17920.4000109.8G44 D48 R49 S52G44-D46 PolarHBondContact O-N 2.95Å; D46-D48 PolarHBondContact O-N 3.29Å; D46-R49 PolarHBondContact O-N 3.09Å; D46-S52 WeakPolarHBondContact O-CB 3.36Å; D46-S52 PolarHBondContact O-OG 3.01Å
47L68.7Low68.6Low100 Ų100120.5 Ų120.552%0.52460%0.597SS.*THydrogen-bonded Turntrans-64-16.4-177.6-63179.4000113P45 R49 E56P45-L47 HydrophobicContact CB-CD2 4.22Å; P45-L47 HydrophobicContact CG-CD2 4.08Å; P45-L47 HydrophobicContact CG-CG 4.28Å; P45-L47 PolarHBondContact O-N 3.11Å; L47-R49 PolarHBondContact O-N 3.24Å; L47-E56 WeakPolarHBondContact CD2-OE2 3.24Å
48D75.3Confident69.5Low122 Ų122117.8 Ų117.865%0.65258%0.584SS**THydrogen-bonded Turntrans-76-11.9-179.4-62.1-43.6000112.1R42 D46R42-D48 IonicContact NH1-OD2 2.9Å; R42-D48 PolarHBondContact NH1-OD2 3.19Å; D46-D48 PolarHBondContact O-N 3.29Å
49R70.1Confident70.5Confident176 Ų176115.6 Ų115.666%0.66457%0.569SS**SBendtrans-86.5127.9178.1-141.6172.5-172.3175.22.8110.8D46 L47 G51 S52D46-R49 PolarHBondContact O-N 3.09Å; L47-R49 PolarHBondContact O-N 3.24Å; R49-G51 PolarHBondContact O-N 3.49Å; R49-S52 PolarHBondContact O-N 2.76Å; R49-S52 PolarHBondContact O-OG 3.44Å
50P62.8Low71.2Confident136 Ų136106.2 Ų106.288%0.88355%0.545SS*.THydrogen-bonded Turntrans-59.1111.9175.423-31.8000109.4
51G69.4Low71.9Confident50 Ų50110.7 Ų110.752%0.51555%0.55SS.*THydrogen-bonded Turntrans119.5-14.1-17700000115.7R49 R54 Q55R49-G51 PolarHBondContact O-N 3.49Å; G51-R54 PolarHBondContact O-N 3.31Å; G51-Q55 PolarHBondContact O-N 3.31Å; G51-Q55 VanDerWaalsContact O-N 3.17Å
52S71.6Confident72.2Confident20 Ų20105.6 Ų105.614%0.1453%0.526CS..Hα-helixtrans-68.9-39.7-179-65.10000113.4D46 R49 R54 Q55 E56D46-S52 WeakPolarHBondContact O-CB 3.36Å; D46-S52 PolarHBondContact O-OG 3.01Å; R49-S52 PolarHBondContact O-N 2.76Å; R49-S52 PolarHBondContact O-OG 3.44Å; S52-R54 VanDerWaalsContact C-N 3.32Å; S52-R54 PolarHBondContact O-N 3.11Å; S52-Q55 PolarHBondContact O-N 3.02Å; S52-E56 WeakPolarHBondContact O-CB 3.49Å; S52-E56 PolarHBondContact O-N 3.01Å
53D79.1Confident72.5Confident79 Ų79102.8 Ų102.842%0.42252%0.524SS..Hα-helixtrans-59.3-42173.9172.7-92.3000111.7E56 R57D53-E56 PolarHBondContact O-N 3.46Å; D53-R57 PolarHBondContact OD2-NH2 2.8Å; D53-R57 IonicContact OD2-NH2 2.73Å; D53-R57 VanDerWaalsContact OD2-NE 3.11Å; D53-R57 PolarHBondContact OD2-NE 3.25Å; D53-R57 IonicContact OD2-NE 3.11Å; D53-R57 IonicContact OD1-NE 2.76Å; D53-R57 VanDerWaalsContact OD2-CZ 3.28Å; D53-R57 IonicContact OD2-CZ 3.28Å; D53-R57 PolarHBondContact OD1-NE 2.56Å; D53-R57 IonicContact OD1-NH2 3.59Å; D53-R57 VanDerWaalsContact CG-NE 3.25Å; D53-R57 WeakPolarHBondContact O-CB 3.2Å; D53-R57 PolarHBondContact O-N 3.16Å; D53-R57 IonicContact OD1-CZ 3.62Å; D53-R57 WeakPolarHBondContact O-CG 3.46Å
54R78.3Confident72.4Confident173 Ų17397.5 Ų97.565%0.65351%0.509SS*.Hα-helixtrans-63.7-47.9178-177.3179.3175.6159.73.4111.5G51 S52 E56 R57 E58G51-R54 PolarHBondContact O-N 3.31Å; S52-R54 VanDerWaalsContact C-N 3.32Å; S52-R54 PolarHBondContact O-N 3.11Å; R54-E56 VanDerWaalsContact C-N 3.34Å; R54-E56 PolarHBondContact O-N 3.4Å; R54-R57 PolarHBondContact O-N 3.49Å; R54-E58 IonicContact NE-OE1 3.57Å; R54-E58 WeakPolarHBondContact O-CG 3.06Å; R54-E58 PolarHBondContact O-N 2.97Å
55Q79.9Confident72.1Confident104 Ų104102.4 Ų102.449%0.48652%0.521SS..Hα-helixtrans-67.6-34.8-177.9-158.1-167.438.400112.5G51 S52 E58 R59G51-Q55 PolarHBondContact O-N 3.31Å; G51-Q55 VanDerWaalsContact O-N 3.17Å; S52-Q55 PolarHBondContact O-N 3.02Å; Q55-E58 PolarHBondContact O-N 3.43Å; Q55-R59 PolarHBondContact O-N 2.73Å; Q55-R59 VanDerWaalsContact O-N 3.09Å
56E78Confident71.9Confident78 Ų78102.2 Ų102.236%0.36453%0.526SS..Hα-helixtrans-65.9-43.7173.3-174.6174.5109.500111.7P45 L47 S52 D53 R54 E58 R59 A60P45-E56 WeakPolarHBondContact CG-OE2 3.33Å; L47-E56 WeakPolarHBondContact CD2-OE2 3.24Å; S52-E56 WeakPolarHBondContact O-CB 3.49Å; S52-E56 PolarHBondContact O-N 3.01Å; D53-E56 PolarHBondContact O-N 3.46Å; R54-E56 VanDerWaalsContact C-N 3.34Å; R54-E56 PolarHBondContact O-N 3.4Å; E56-E58 VanDerWaalsContact C-N 3.32Å; E56-E58 PolarHBondContact O-N 3.38Å; E56-R59 PolarHBondContact O-N 3.47Å; E56-A60 PolarHBondContact O-N 3.42Å
57R77.7Confident71.5Confident140 Ų140105.5 Ų105.553%0.52854%0.543SS..Hα-helixtrans-61.9-38.8174-71.3174.9-166.7-68.4-9.1112.5D53 R54 R61D53-R57 PolarHBondContact OD2-NH2 2.8Å; D53-R57 IonicContact OD2-NH2 2.73Å; D53-R57 VanDerWaalsContact OD2-NE 3.11Å; D53-R57 PolarHBondContact OD2-NE 3.25Å; D53-R57 IonicContact OD2-NE 3.11Å; D53-R57 IonicContact OD1-NE 2.76Å; D53-R57 VanDerWaalsContact OD2-CZ 3.28Å; D53-R57 IonicContact OD2-CZ 3.28Å; D53-R57 PolarHBondContact OD1-NE 2.56Å; D53-R57 IonicContact OD1-NH2 3.59Å; D53-R57 VanDerWaalsContact CG-NE 3.25Å; D53-R57 WeakPolarHBondContact O-CB 3.2Å; D53-R57 PolarHBondContact O-N 3.16Å; D53-R57 IonicContact OD1-CZ 3.62Å; D53-R57 WeakPolarHBondContact O-CG 3.46Å; R54-R57 PolarHBondContact O-N 3.49Å; R57-R61 VanDerWaalsContact O-N 3.16Å; R57-R61 WeakPolarHBondContact O-CG 3.48Å; R57-R61 VanDerWaalsContact O-CG 3.24Å; R57-R61 PolarHBondContact O-N 3.34Å
58E79.2Confident71.5Confident100 Ų100107.5 Ų107.547%0.46755%0.554SS.*Hα-helixtrans-64.9-40.7176.5-73.5168.3140.500111.6R54 Q55 E56 R61 G62R54-E58 IonicContact NE-OE1 3.57Å; R54-E58 WeakPolarHBondContact O-CG 3.06Å; R54-E58 PolarHBondContact O-N 2.97Å; Q55-E58 PolarHBondContact O-N 3.43Å; E56-E58 VanDerWaalsContact C-N 3.32Å; E56-E58 PolarHBondContact O-N 3.38Å; E58-R61 PolarHBondContact O-N 3.17Å; E58-G62 PolarHBondContact O-N 3.43Å
59R78.4Confident70.8Confident119 Ų119110.3 Ų110.345%0.44956%0.563SS.*Hα-helixtrans-64.4-49173.9-77.2-174.7-75.9-94.7-2.6112.7Q55 E56 R61 G62 D63Q55-R59 PolarHBondContact O-N 2.73Å; Q55-R59 VanDerWaalsContact O-N 3.09Å; E56-R59 PolarHBondContact O-N 3.47Å; R59-R61 PolarHBondContact O-N 3.49Å; R59-G62 PolarHBondContact O-N 2.9Å; R59-G62 VanDerWaalsContact O-N 3.11Å; R59-D63 PolarHBondContact O-N 2.78Å; R59-D63 VanDerWaalsContact O-N 3.09Å
60A76.7Confident70.3Confident55 Ų55111 Ų11146%0.45557%0.574SS.*Hα-helixtrans-60.7-29.3-179.700000113E56 S64E56-A60 PolarHBondContact O-N 3.42Å; A60-S64 PolarHBondContact O-OG 2.96Å; A60-S64 PolarHBondContact O-N 3.47Å
61R73.4Confident69.9Low173 Ų173113.4 Ų113.465%0.65359%0.594SS**Hα-helixtrans-70.6-47.3173.5-73.2170.4-176.6-168.70.2112R57 E58 R59 D63 S64 E65R57-R61 VanDerWaalsContact O-N 3.16Å; R57-R61 WeakPolarHBondContact O-CG 3.48Å; R57-R61 VanDerWaalsContact O-CG 3.24Å; R57-R61 PolarHBondContact O-N 3.34Å; E58-R61 PolarHBondContact O-N 3.17Å; R59-R61 PolarHBondContact O-N 3.49Å; R61-D63 PolarHBondContact O-N 2.81Å; R61-S64 WeakPolarHBondContact O-CB 3.18Å; R61-S64 PolarHBondContact O-N 2.88Å; R61-E65 PolarHBondContact O-N 2.9Å
62G68.4Low69.9Low33 Ų33116.6 Ų116.634%0.3460%0.598SS.*Hα-helixtrans-60.9-31.517800000113.9E58 R59 S64 E65E58-G62 PolarHBondContact O-N 3.43Å; R59-G62 PolarHBondContact O-N 2.9Å; R59-G62 VanDerWaalsContact O-N 3.11Å; G62-S64 VanDerWaalsContact C-N 3.33Å; G62-E65 WeakPolarHBondContact CA-OE1 3.37Å; G62-E65 WeakPolarHBondContact O-CG 3.46Å
63D64.4Low69.8Low119 Ų119121.7 Ų121.764%0.63662%0.622SS**Hα-helixtrans-77.2-19.2176.1-65.1-28.9000113.1R59 R61R59-D63 PolarHBondContact O-N 2.78Å; R59-D63 VanDerWaalsContact O-N 3.09Å; R61-D63 PolarHBondContact O-N 2.81Å
64S61Low69.3Low83 Ų83124.1 Ų124.158%0.5863%0.633SS**Hα-helixtrans-87.2-32.6-178.4-57.60000112.9A60 R61 G62 A66A60-S64 PolarHBondContact O-OG 2.96Å; A60-S64 PolarHBondContact O-N 3.47Å; R61-S64 WeakPolarHBondContact O-CB 3.18Å; R61-S64 PolarHBondContact O-N 2.88Å; G62-S64 VanDerWaalsContact C-N 3.33Å; S64-A66 VanDerWaalsContact C-N 3.3Å
65E61.9Low68.8Low140 Ų140121.2 Ų121.265%0.65463%0.632SS**Hα-helixtrans-75.4-17.417956-168.197.400113.4R61 G62 L67R61-E65 PolarHBondContact O-N 2.9Å; G62-E65 WeakPolarHBondContact CA-OE1 3.37Å; G62-E65 WeakPolarHBondContact O-CG 3.46Å; E65-L67 VanDerWaalsContact C-N 3.31Å; E65-L67 PolarHBondContact O-N 2.96Å
66A63.3Low68.1Low67 Ų67122.3 Ų122.355%0.55464%0.641SS**THydrogen-bonded Turntrans-80.1-3.9178.300000114.8S64S64-A66 VanDerWaalsContact C-N 3.3Å
67L62.9Low67.4Low148 Ų148125.2 Ų125.278%0.77566%0.66SS**THydrogen-bonded Turntrans-105.7-3.3-176.8-62.9177.7000114E65E65-L67 VanDerWaalsContact C-N 3.31Å; E65-L67 PolarHBondContact O-N 2.96Å
68D69.9Low66.7Low142 Ų142124.1 Ų124.176%0.75967%0.669SS**SBendtrans-94.51.9-174.5-164.758.8000113.6
69E61.1Low65.7Low182 Ų182126 Ų12685%0.8569%0.685SS**SBendtrans-93.415.2-176.4-69.3-179.388.100114.8
70E59.3Low64.7Low189 Ų189126.6 Ų126.688%0.88371%0.705SS**  trans-143.983.5167-158.7-162.3122.400111.9
71S53.7Low63.6Low188 Ų188133.1 Ų133.1100%1.31573%0.727SS**  trans-1580150.6-173.80000112.9

Retrieved 71 of 71 residues in 72 ms (Link to these results)