A0A087WZD9_HUMAN Loading...

Jrk helix-turn-helix protein

AlphaFold DB , UniProt , Accession A0A087WZD9, Species HUMAN (Homo sapiens, Human), Gene JRK, Length 25 aa.

						>A0A087WZD9_HUMAN|A0A087WZD9|JRK
MASKPAAGKSRGEKRKRVVLTLKEK
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	39.8	Very low	63.8	Low	241 Å²	241	131.7 Å²	131.7	100%	1.187	76%	0.755	S	S	*	*				0	111.5	0	-142.3	171.9	-163.5	0	0	107.2	S3	M1-S3 PolarHBondContact O-N 3.26Å
2	A	66.9	Low	65.3	Low	104 Å²	104	123.8 Å²	123.8	86%	0.86	72%	0.723	S	S	*	*			trans	-80.3	106.9	176.4	0	0	0	0	0	108.3	K4	A2-K4 PolarHBondContact O-N 3.4Å
3	S	68	Low	66.5	Low	112 Å²	112	120.1 Å²	120.1	78%	0.783	69%	0.694	S	S	*	*			trans	-59.3	121	171.5	-47.1	0	0	0	0	107.9	M1	M1-S3 PolarHBondContact O-N 3.26Å
4	K	66.3	Low	67.5	Low	195 Å²	195	122.4 Å²	122.4	85%	0.848	69%	0.692	S	S	*	*			trans	-45.3	129.7	172.8	-78.4	173.4	175.1	171.2	0	108.1	A2 A6	A2-K4 PolarHBondContact O-N 3.4Å; K4-A6 VanDerWaalsContact O-N 3.11Å; K4-A6 PolarHBondContact O-N 2.95Å
5	P	64.4	Low	68.6	Low	109 Å²	109	127.1 Å²	127.1	71%	0.708	70%	0.695	S	S	*	*			trans	-56	126.8	177.3	22.4	-30.9	0	0	0	107.3	A7	P5-A7 PolarHBondContact O-N 3.05Å
6	A	67.2	Low	69.6	Low	74 Å²	74	129.2 Å²	129.2	61%	0.612	70%	0.695	S	S	*	*			trans	-43	118.6	-179	0	0	0	0	0	108.8	K4 G8	K4-A6 VanDerWaalsContact O-N 3.11Å; K4-A6 PolarHBondContact O-N 2.95Å; A6-G8 PolarHBondContact O-N 3.4Å
7	A	61.6	Low	70.5	Confident	104 Å²	104	131 Å²	131	86%	0.86	69%	0.689	S	S	*	*	T	Hydrogen-bonded Turn	trans	-55.4	106.3	178.4	0	0	0	0	0	106.6	P5	P5-A7 PolarHBondContact O-N 3.05Å
8	G	61.5	Low	71.4	Confident	25 Å²	25	127.8 Å²	127.8	26%	0.258	68%	0.676	S	S	.	*	T	Hydrogen-bonded Turn	trans	151.8	-3	-178	0	0	0	0	0	118	A6 S10 E13	A6-G8 PolarHBondContact O-N 3.4Å; G8-S10 PolarHBondContact O-N 3.48Å; G8-E13 WeakPolarHBondContact CA-OE1 3.41Å; G8-E13 WeakPolarHBondContact CA-OE2 3.35Å
9	K	65.3	Low	72.2	Confident	190 Å²	190	126.3 Å²	126.3	83%	0.826	67%	0.672	S	S	*	*			trans	-86.4	21.4	169.2	-60	-172.6	-178.1	-176	0	113.8
10	S	70	Confident	72.8	Confident	77 Å²	77	125.2 Å²	125.2	54%	0.538	67%	0.665	S	S	.	*	S	Bend	trans	-84	138.8	172.5	178.3	0	0	0	0	110.2	G8 G12 E13 K14	G8-S10 PolarHBondContact O-N 3.48Å; S10-G12 PolarHBondContact O-N 2.95Å; S10-G12 VanDerWaalsContact O-N 3.07Å; S10-G12 PolarHBondContact OG-N 3.28Å; S10-E13 PolarHBondContact O-N 3.47Å; S10-K14 PolarHBondContact O-N 3.48Å; S10-K14 VanDerWaalsContact O-N 3.15Å
11	R	70.7	Confident	73.3	Confident	218 Å²	218	123.1 Å²	123.1	82%	0.823	66%	0.658	S	S	*	*	H	α-helix	trans	-52	-32	174	-77	-178.2	171.2	141.2	-3	112.1	R15	R11-R15 WeakPolarHBondContact O-CG 3.36Å; R11-R15 PolarHBondContact O-N 3.38Å
12	G	81.6	Confident	75.4	Confident	36 Å²	36	117.3 Å²	117.3	37%	0.371	63%	0.631	S	S	.	*	H	α-helix	trans	-65.5	-40.6	176	0	0	0	0	0	113.2	S10 R15 K16	S10-G12 PolarHBondContact O-N 2.95Å; S10-G12 VanDerWaalsContact O-N 3.07Å; S10-G12 PolarHBondContact OG-N 3.28Å; G12-R15 PolarHBondContact O-N 3.42Å; G12-K16 WeakPolarHBondContact O-CG 3.29Å; G12-K16 PolarHBondContact O-N 2.99Å
13	E	81.2	Confident	76.2	Confident	76 Å²	76	120.7 Å²	120.7	36%	0.355	63%	0.626	S	S	.	*	H	α-helix	trans	-71.6	-39.1	177.8	-167.7	179.4	108.1	0	0	111.7	G8 S10 R15 K16 R17	G8-E13 WeakPolarHBondContact CA-OE1 3.41Å; G8-E13 WeakPolarHBondContact CA-OE2 3.35Å; S10-E13 PolarHBondContact O-N 3.47Å; E13-R15 VanDerWaalsContact C-N 3.3Å; E13-R15 PolarHBondContact O-N 3.06Å; E13-K16 PolarHBondContact O-N 3.39Å; E13-R17 WeakPolarHBondContact O-CB 3.41Å; E13-R17 PolarHBondContact O-N 3.15Å; E13-R17 IonicContact OE1-NH2 3.77Å
14	K	80.4	Confident	76.7	Confident	153 Å²	153	123.1 Å²	123.1	67%	0.665	63%	0.625	S	S	*	*	H	α-helix	trans	-58.1	-43	172.6	-172.9	175.2	-179.2	178.5	0	111.4	S10 R17 V18	S10-K14 PolarHBondContact O-N 3.48Å; S10-K14 VanDerWaalsContact O-N 3.15Å; K14-R17 PolarHBondContact O-N 3.36Å; K14-V18 PolarHBondContact O-N 3.07Å; K14-V18 VanDerWaalsContact O-CG2 3.29Å; K14-V18 WeakPolarHBondContact O-CG2 3.28Å
15	R	84.1	Confident	76.1	Confident	192 Å²	192	124.9 Å²	124.9	73%	0.725	63%	0.633	S	S	*	*	H	α-helix	trans	-63.5	-46.7	175.3	-76.5	-179.6	179.3	-173	0.3	112.1	R11 G12 E13 R17 V18 V19	R11-R15 WeakPolarHBondContact O-CG 3.36Å; R11-R15 PolarHBondContact O-N 3.38Å; G12-R15 PolarHBondContact O-N 3.42Å; E13-R15 VanDerWaalsContact C-N 3.3Å; E13-R15 PolarHBondContact O-N 3.06Å; R15-R17 VanDerWaalsContact C-N 3.31Å; R15-R17 PolarHBondContact O-N 3.15Å; R15-V18 PolarHBondContact O-N 2.95Å; R15-V19 WeakPolarHBondContact O-CG2 3.43Å; R15-V19 PolarHBondContact O-N 3.24Å
16	K	85.1	Confident	76.6	Confident	161 Å²	161	125.7 Å²	125.7	70%	0.7	63%	0.629	S	S	*	*	H	α-helix	trans	-58.2	-43.2	176.7	-73.2	178.7	-179.9	-172.1	0	111.8	G12 E13 V19 L20	G12-K16 WeakPolarHBondContact O-CG 3.29Å; G12-K16 PolarHBondContact O-N 2.99Å; E13-K16 PolarHBondContact O-N 3.39Å; K16-V19 PolarHBondContact O-N 2.97Å; K16-L20 WeakPolarHBondContact O-CB 3.38Å; K16-L20 PolarHBondContact O-N 2.85Å
17	R	84.6	Confident	77.1	Confident	160 Å²	160	128.4 Å²	128.4	60%	0.604	63%	0.63	S	S	*	*	H	α-helix	trans	-60.8	-49.2	176.1	-171.7	-175.6	-61	-144.2	0.3	111.7	E13 K14 R15 V19 L20 T21	E13-R17 WeakPolarHBondContact O-CB 3.41Å; E13-R17 PolarHBondContact O-N 3.15Å; E13-R17 IonicContact OE1-NH2 3.77Å; K14-R17 PolarHBondContact O-N 3.36Å; R15-R17 VanDerWaalsContact C-N 3.31Å; R15-R17 PolarHBondContact O-N 3.15Å; R17-V19 PolarHBondContact O-N 2.96Å; R17-L20 PolarHBondContact O-N 3Å; R17-T21 PolarHBondContact O-N 3.39Å; R17-T21 PolarHBondContact O-OG1 3.03Å
18	V	85.6	Confident	78	Confident	74 Å²	74	129.8 Å²	129.8	45%	0.448	62%	0.618	S	S	.	*	H	α-helix	trans	-61.1	-45.3	179.1	172	0	0	0	0	111.4	K14 R15 L20 T21 L22	K14-V18 PolarHBondContact O-N 3.07Å; K14-V18 VanDerWaalsContact O-CG2 3.29Å; K14-V18 WeakPolarHBondContact O-CG2 3.28Å; R15-V18 PolarHBondContact O-N 2.95Å; V18-L20 PolarHBondContact O-N 3.46Å; V18-T21 PolarHBondContact O-N 2.88Å; V18-L22 HydrophobicContact CG1-CD1 3.76Å; V18-L22 HydrophobicContact CG1-CG 4.3Å; V18-L22 WeakPolarHBondContact O-CB 3.42Å; V18-L22 VanDerWaalsContact O-CG 3.28Å; V18-L22 WeakPolarHBondContact O-CG 3.12Å; V18-L22 PolarHBondContact O-N 3.32Å
19	V	86.6	Confident	79	Confident	98 Å²	98	135.9 Å²	135.9	59%	0.594	64%	0.639	S	S	*	*	H	α-helix	trans	-61.9	-43.6	178	172	0	0	0	0	111.4	R15 K16 R17 L22 K23	R15-V19 WeakPolarHBondContact O-CG2 3.43Å; R15-V19 PolarHBondContact O-N 3.24Å; K16-V19 PolarHBondContact O-N 2.97Å; R17-V19 PolarHBondContact O-N 2.96Å; V19-L22 PolarHBondContact O-N 2.95Å; V19-K23 WeakPolarHBondContact O-CB 2.96Å; V19-K23 PolarHBondContact O-N 3.34Å
20	L	85.5	Confident	79.8	Confident	104 Å²	104	132.6 Å²	132.6	55%	0.545	63%	0.627	S	S	.	*	H	α-helix	trans	-61.6	-48.5	177.4	-173.2	68.3	0	0	0	111.2	K16 R17 V18 L22 K23 E24	K16-L20 WeakPolarHBondContact O-CB 3.38Å; K16-L20 PolarHBondContact O-N 2.85Å; R17-L20 PolarHBondContact O-N 3Å; V18-L20 PolarHBondContact O-N 3.46Å; L20-L22 VanDerWaalsContact C-N 3.3Å; L20-L22 PolarHBondContact O-N 3.11Å; L20-K23 PolarHBondContact O-N 3.21Å; L20-K23 VanDerWaalsContact O-N 3.15Å; L20-E24 PolarHBondContact O-N 3.32Å
21	T	83	Confident	80.5	Confident	83 Å²	83	136.3 Å²	136.3	51%	0.509	63%	0.633	S	S	.	*	H	α-helix	trans	-64.8	-31.5	179.7	-54.3	0	0	0	0	113.3	R17 V18	R17-T21 PolarHBondContact O-N 3.39Å; R17-T21 PolarHBondContact O-OG1 3.03Å; V18-T21 PolarHBondContact O-N 2.88Å
22	L	84.5	Confident	81.2	Confident	119 Å²	119	130.4 Å²	130.4	62%	0.623	62%	0.619	S	S	*	*	H	α-helix	trans	-77.7	-24.9	175.3	-71.7	174	0	0	0	113.1	V18 V19 L20	V18-L22 HydrophobicContact CG1-CD1 3.76Å; V18-L22 HydrophobicContact CG1-CG 4.3Å; V18-L22 WeakPolarHBondContact O-CB 3.42Å; V18-L22 VanDerWaalsContact O-CG 3.28Å; V18-L22 WeakPolarHBondContact O-CG 3.12Å; V18-L22 PolarHBondContact O-N 3.32Å; V19-L22 PolarHBondContact O-N 2.95Å; L20-L22 VanDerWaalsContact C-N 3.3Å; L20-L22 PolarHBondContact O-N 3.11Å
23	K	83.6	Confident	81.2	Confident	174 Å²	174	137.7 Å²	137.7	76%	0.757	64%	0.638	S	S	*	*	H	α-helix	trans	-78.2	-28.4	178.9	-171	-175	175.9	-167.8	0	112.6	V19 L20 K25	V19-K23 WeakPolarHBondContact O-CB 2.96Å; V19-K23 PolarHBondContact O-N 3.34Å; L20-K23 PolarHBondContact O-N 3.21Å; L20-K23 VanDerWaalsContact O-N 3.15Å; K23-K25 VanDerWaalsContact C-N 3.32Å
24	E	77.5	Confident	81.1	Confident	163 Å²	163	142.8 Å²	142.8	76%	0.762	66%	0.662	S	S	*	*			trans	-89.2	4	-179.8	-61.5	-161.3	150.1	0	0	113.8	L20	L20-E24 PolarHBondContact O-N 3.32Å
25	K	53.3	Low	81.2	Confident	233 Å²	233	141.9 Å²	141.9	100%	1.013	66%	0.662	S	S	*	*			trans	-107	0	167.2	-81	-170.5	172	-169.9	0	110.1	K23	K23-K25 VanDerWaalsContact C-N 3.32Å

Retrieved 25 of 25 residues in 104 ms (Link to these results)

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