A0A087X2A2_HUMAN Loading...

Mitochondrial ribosomal protein L55

AlphaFold DB , UniProt , Accession A0A087X2A2, Species HUMAN (Homo sapiens, Human), Gene MRPL55, Length 24 aa.

						>A0A087X2A2_HUMAN|A0A087X2A2|MRPL55
MAAVGSLLGRLRQSTVKATGPALR
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	43.7	Very low	74	Confident	214 Å²	214	93.9 Å²	93.9	100%	1.054	56%	0.562	S	S	*	*				0	75.7	0	-173.3	68.3	162.7	0	0	109.7	V4	M1-V4 HydrophobicContact CE-CG2 3.92Å; M1-V4 HydrophobicContact CE-CB 4.36Å
2	A	56.8	Low	74.7	Confident	93 Å²	93	102.2 Å²	102.2	77%	0.769	58%	0.576	S	S	*	*			trans	-111.9	-0.8	-171	0	0	0	0	0	114.1	S6	A2-S6 WeakPolarHBondContact O-CB 3.15Å
3	A	61.2	Low	75.2	Confident	74 Å²	74	104.7 Å²	104.7	61%	0.612	58%	0.58	S	S	*	*	S	Bend	trans	-102.9	-38.3	-168.3	0	0	0	0	0	114.9	S6 L7	A3-S6 WeakPolarHBondContact O-CB 3.03Å; A3-S6 PolarHBondContact O-N 2.91Å; A3-L7 PolarHBondContact O-N 2.8Å; A3-L7 VanDerWaalsContact O-N 3.15Å
4	V	66.7	Low	75.5	Confident	81 Å²	81	101.5 Å²	101.5	49%	0.491	57%	0.569	S	S	.	*	H	α-helix	trans	-72	-41.5	179.3	-177.6	0	0	0	0	111	M1 S6 L7 L8	M1-V4 HydrophobicContact CE-CG2 3.92Å; M1-V4 HydrophobicContact CE-CB 4.36Å; V4-S6 PolarHBondContact O-N 3.43Å; V4-L7 PolarHBondContact O-N 2.75Å; V4-L8 HydrophobicContact CG1-CD1 4.15Å; V4-L8 PolarHBondContact O-N 3.27Å; V4-L8 VanDerWaalsContact O-N 3.09Å
5	G	77.2	Confident	75.5	Confident	56 Å²	56	100.2 Å²	100.2	58%	0.577	56%	0.564	S	S	*	*	H	α-helix	trans	-62.5	-26.7	170.9	0	0	0	0	0	113.1	G9	G5-G9 WeakPolarHBondContact O-CA 3.38Å; G5-G9 PolarHBondContact O-N 3.03Å
6	S	82	Confident	75.5	Confident	47 Å²	47	99.7 Å²	99.7	33%	0.329	56%	0.564	S	S	.	*	H	α-helix	trans	-74	-43.3	176.4	-170.7	0	0	0	0	112.2	A2 A3 V4 R10	A2-S6 WeakPolarHBondContact O-CB 3.15Å; A3-S6 WeakPolarHBondContact O-CB 3.03Å; A3-S6 PolarHBondContact O-N 2.91Å; V4-S6 PolarHBondContact O-N 3.43Å; S6-R10 VanDerWaalsContact OG-NH1 3.12Å; S6-R10 PolarHBondContact OG-NH1 2.85Å; S6-R10 PolarHBondContact O-N 3.44Å; S6-R10 VanDerWaalsContact O-CG 3.24Å; S6-R10 WeakPolarHBondContact O-CB 3.03Å; S6-R10 WeakPolarHBondContact O-CG 3.3Å
7	L	85.3	Confident	75.2	Confident	95 Å²	95	104.7 Å²	104.7	50%	0.497	58%	0.578	S	S	.	*	H	α-helix	trans	-68	-49.2	176.8	-179.2	61.9	0	0	0	112	A3 V4 G9 R10 L11	A3-L7 PolarHBondContact O-N 2.8Å; A3-L7 VanDerWaalsContact O-N 3.15Å; V4-L7 PolarHBondContact O-N 2.75Å; L7-G9 VanDerWaalsContact C-N 3.31Å; L7-G9 PolarHBondContact O-N 2.7Å; L7-R10 PolarHBondContact O-N 2.82Å; L7-L11 PolarHBondContact O-N 3Å; L7-L11 WeakPolarHBondContact O-CG 3.21Å; L7-L11 HydrophobicContact CG-CD1 4.25Å; L7-L11 HydrophobicContact CD1-CG 4.47Å; L7-L11 HydrophobicContact CD1-CD1 4.43Å
8	L	85.6	Confident	74.8	Confident	111 Å²	111	103.9 Å²	103.9	58%	0.581	59%	0.587	S	S	*	*	H	α-helix	trans	-63.3	-38.1	176.5	-71.9	174.2	0	0	0	111.7	V4 L11 R12	V4-L8 HydrophobicContact CG1-CD1 4.15Å; V4-L8 PolarHBondContact O-N 3.27Å; V4-L8 VanDerWaalsContact O-N 3.09Å; L8-L11 PolarHBondContact O-N 3.03Å; L8-R12 WeakPolarHBondContact O-CB 3.08Å; L8-R12 PolarHBondContact O-N 3.44Å
9	G	86.3	Confident	74.5	Confident	23 Å²	23	102.7 Å²	102.7	24%	0.237	58%	0.583	C	S	.	*	H	α-helix	trans	-65.7	-37.7	174.1	0	0	0	0	0	112.9	G5 L7 Q13	G5-G9 WeakPolarHBondContact O-CA 3.38Å; G5-G9 PolarHBondContact O-N 3.03Å; L7-G9 VanDerWaalsContact C-N 3.31Å; L7-G9 PolarHBondContact O-N 2.7Å; G9-Q13 VanDerWaalsContact O-CB 3.27Å; G9-Q13 WeakPolarHBondContact O-CB 3.36Å; G9-Q13 WeakPolarHBondContact O-CG 3.2Å; G9-Q13 PolarHBondContact O-N 3.44Å; G9-Q13 PolarHBondContact O-NE2 2.79Å
10	R	85	Confident	73.7	Confident	148 Å²	148	99.6 Å²	99.6	56%	0.558	57%	0.574	S	S	*	*	H	α-helix	trans	-69.6	-40.7	174	-78.3	-170.9	-59.3	-116.9	3.6	112.2	S6 L7 Q13 S14	S6-R10 VanDerWaalsContact OG-NH1 3.12Å; S6-R10 PolarHBondContact OG-NH1 2.85Å; S6-R10 PolarHBondContact O-N 3.44Å; S6-R10 VanDerWaalsContact O-CG 3.24Å; S6-R10 WeakPolarHBondContact O-CB 3.03Å; S6-R10 WeakPolarHBondContact O-CG 3.3Å; L7-R10 PolarHBondContact O-N 2.82Å; R10-Q13 PolarHBondContact O-N 2.88Å; R10-S14 PolarHBondContact O-N 3.19Å; R10-S14 WeakPolarHBondContact O-CB 3.27Å; R10-S14 PolarHBondContact O-OG 2.78Å
11	L	84.2	Confident	73.3	Confident	91 Å²	91	100 Å²	100	48%	0.476	58%	0.58	S	S	.	*	H	α-helix	trans	-66	-46.1	176.3	-73.2	171.7	0	0	0	111.8	L7 L8 Q13 S14 T15	L7-L11 PolarHBondContact O-N 3Å; L7-L11 WeakPolarHBondContact O-CG 3.21Å; L7-L11 HydrophobicContact CG-CD1 4.25Å; L7-L11 HydrophobicContact CD1-CG 4.47Å; L7-L11 HydrophobicContact CD1-CD1 4.43Å; L8-L11 PolarHBondContact O-N 3.03Å; L11-Q13 VanDerWaalsContact C-N 3.33Å; L11-Q13 PolarHBondContact O-N 3.22Å; L11-S14 WeakPolarHBondContact CA-OG 3.32Å; L11-S14 PolarHBondContact O-N 2.86Å; L11-S14 PolarHBondContact O-OG 3.27Å; L11-T15 PolarHBondContact O-OG1 3.45Å; L11-T15 PolarHBondContact O-N 2.89Å; L11-T15 WeakPolarHBondContact O-CB 3.33Å
12	R	82.8	Confident	74.1	Confident	193 Å²	193	93.3 Å²	93.3	73%	0.728	56%	0.559	S	S	*	*	H	α-helix	trans	-60.7	-43.8	174.8	-179.4	-174.5	168	-156.4	-3	111.2	L8 T15 V16	L8-R12 WeakPolarHBondContact O-CB 3.08Å; L8-R12 PolarHBondContact O-N 3.44Å; R12-T15 PolarHBondContact O-N 3.44Å; R12-V16 HydrophobicContact CG-CG2 4.35Å; R12-V16 WeakPolarHBondContact O-CB 3.35Å; R12-V16 WeakPolarHBondContact O-CG2 3.37Å; R12-V16 PolarHBondContact O-N 3.45Å
13	Q	81.6	Confident	74.3	Confident	135 Å²	135	97 Å²	97	63%	0.631	56%	0.564	S	S	*	*	H	α-helix	trans	-67.1	-38.9	176.6	-76.9	175.8	86.1	0	0	112.1	G9 R10 L11 K17	G9-Q13 VanDerWaalsContact O-CB 3.27Å; G9-Q13 WeakPolarHBondContact O-CB 3.36Å; G9-Q13 WeakPolarHBondContact O-CG 3.2Å; G9-Q13 PolarHBondContact O-N 3.44Å; G9-Q13 PolarHBondContact O-NE2 2.79Å; R10-Q13 PolarHBondContact O-N 2.88Å; L11-Q13 VanDerWaalsContact C-N 3.33Å; L11-Q13 PolarHBondContact O-N 3.22Å; Q13-K17 WeakPolarHBondContact O-CB 3.38Å; Q13-K17 PolarHBondContact O-N 2.91Å
14	S	78.8	Confident	74.2	Confident	60 Å²	60	107.5 Å²	107.5	42%	0.42	59%	0.588	S	S	.	*	H	α-helix	trans	-67.2	-38.5	175.5	65	0	0	0	0	111.6	R10 L11 A18	R10-S14 PolarHBondContact O-N 3.19Å; R10-S14 WeakPolarHBondContact O-CB 3.27Å; R10-S14 PolarHBondContact O-OG 2.78Å; L11-S14 WeakPolarHBondContact CA-OG 3.32Å; L11-S14 PolarHBondContact O-N 2.86Å; L11-S14 PolarHBondContact O-OG 3.27Å; S14-A18 WeakPolarHBondContact O-CB 3.44Å; S14-A18 PolarHBondContact O-N 2.95Å
15	T	76.1	Confident	74.5	Confident	82 Å²	82	108.9 Å²	108.9	50%	0.503	59%	0.593	S	S	.	*	H	α-helix	trans	-71.2	-43.7	176.9	-58.1	0	0	0	0	111.5	L11 R12 K17 A18 T19	L11-T15 PolarHBondContact O-OG1 3.45Å; L11-T15 PolarHBondContact O-N 2.89Å; L11-T15 WeakPolarHBondContact O-CB 3.33Å; R12-T15 PolarHBondContact O-N 3.44Å; T15-K17 VanDerWaalsContact C-N 3.3Å; T15-K17 PolarHBondContact O-N 2.9Å; T15-A18 PolarHBondContact O-N 3.12Å; T15-T19 PolarHBondContact O-OG1 3.24Å; T15-T19 PolarHBondContact O-N 3.3Å; T15-T19 WeakPolarHBondContact O-CB 3.33Å; T15-T19 WeakPolarHBondContact O-CA 3.24Å; T15-T19 VanDerWaalsContact O-CA 3.3Å
16	V	74.5	Confident	74.4	Confident	92 Å²	92	111.6 Å²	111.6	56%	0.558	59%	0.594	S	S	*	*	H	α-helix	trans	-67.5	-32.1	175.9	173.4	0	0	0	0	111.7	R12 T19 G20	R12-V16 HydrophobicContact CG-CG2 4.35Å; R12-V16 WeakPolarHBondContact O-CB 3.35Å; R12-V16 WeakPolarHBondContact O-CG2 3.37Å; R12-V16 PolarHBondContact O-N 3.45Å; V16-T19 CarbonylContact O-C 3.2Å; V16-T19 VanDerWaalsContact O-O 3.07Å; V16-G20 PolarHBondContact O-N 3.09Å
17	K	71.4	Confident	74	Confident	185 Å²	185	115.2 Å²	115.2	80%	0.804	61%	0.609	S	S	*	*	H	α-helix	trans	-76.8	-37.6	176.4	-173.6	177.6	-178.3	-176.9	0	112.6	Q13 T15	Q13-K17 WeakPolarHBondContact O-CB 3.38Å; Q13-K17 PolarHBondContact O-N 2.91Å; T15-K17 VanDerWaalsContact C-N 3.3Å; T15-K17 PolarHBondContact O-N 2.9Å
18	A	67.5	Low	73.3	Confident	90 Å²	90	116.4 Å²	116.4	74%	0.744	62%	0.616	S	S	*	*	H	α-helix	trans	-79	-33.2	176.4	0	0	0	0	0	112	S14 T15	S14-A18 WeakPolarHBondContact O-CB 3.44Å; S14-A18 PolarHBondContact O-N 2.95Å; T15-A18 PolarHBondContact O-N 3.12Å
19	T	68.6	Low	72.5	Confident	82 Å²	82	116.8 Å²	116.8	50%	0.503	62%	0.618	S	S	.	*	T	Hydrogen-bonded Turn	trans	-100.5	58.5	169.6	-43	0	0	0	0	108.1	T15 V16 A22	T15-T19 PolarHBondContact O-OG1 3.24Å; T15-T19 PolarHBondContact O-N 3.3Å; T15-T19 WeakPolarHBondContact O-CB 3.33Å; T15-T19 WeakPolarHBondContact O-CA 3.24Å; T15-T19 VanDerWaalsContact O-CA 3.3Å; V16-T19 CarbonylContact O-C 3.2Å; V16-T19 VanDerWaalsContact O-O 3.07Å; T19-A22 HydrophobicContact CG2-CB 3.95Å
20	G	59.3	Low	71.6	Confident	39 Å²	39	123 Å²	123	40%	0.402	64%	0.643	S	S	.	*			trans	-52.5	150.5	162.2	0	0	0	0	0	109.3	V16 A22	V16-G20 PolarHBondContact O-N 3.09Å; G20-A22 VanDerWaalsContact C-N 3.33Å; G20-A22 PolarHBondContact O-N 3.34Å
21	P	64.8	Low	70.7	Confident	109 Å²	109	121.2 Å²	121.2	71%	0.708	65%	0.649	S	S	*	*			trans	-46.3	93.8	-149.5	27.9	-36.9	0	0	0	110.7	L23 R24	P21-L23 PolarHBondContact O-N 3.15Å; P21-R24 WeakPolarHBondContact CB-O 3.4Å
22	A	61.7	Low	69.6	Low	73 Å²	73	123.5 Å²	123.5	60%	0.603	66%	0.662	S	S	*	*	S	Bend	trans	-80.8	55.7	-179.5	0	0	0	0	0	108.5	T19 G20	T19-A22 HydrophobicContact CG2-CB 3.95Å; G20-A22 VanDerWaalsContact C-N 3.33Å; G20-A22 PolarHBondContact O-N 3.34Å
23	L	60.7	Low	68.5	Low	170 Å²	170	117.8 Å²	117.8	89%	0.89	66%	0.657	S	S	*	*			trans	105.1	26.6	174	-50.9	158.1	0	0	0	118.2	P21	P21-L23 PolarHBondContact O-N 3.15Å
24	R	57.4	Low	67.3	Low	296 Å²	296	116.2 Å²	116.2	100%	1.117	66%	0.659	S	S	*	*			trans	-150.8	0	159.1	-65.8	-166.6	179.5	167.6	0.9	112.6	P21	P21-R24 WeakPolarHBondContact CB-O 3.4Å

Retrieved 24 of 24 residues in 7.4 ms (Link to these results)

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