A0A087XU49_POEFO Loading...

Mediator of RNA polymerase II transcription subunit 9

Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.

AlphaFold DB , UniProt , Accession A0A087XU49, Species POEFO (Poecilia formosa, Amazon molly), Gene MED9, Length 109 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1R37.9Very low38.9Very low301 Ų301159.1 Ų159.1100%1.13682%0.82SS**  0120.10-74.1178173.5171.5-3106
2E36.8Very low38.9Very low187 Ų187155 Ų15587%0.87482%0.815SS**  cis-160.6142.83-177.8164.5105.100105.2A4E2-A4 PolarHBondContact O-N 3.46Å
3K40.5Very low38.8Very low207 Ų207152.1 Ų152.190%0.980%0.795SS**  trans-65.5122.5-174.2-70.9179174-174.30110.6
4A40.4Very low38.9Very low101 Ų101149.6 Ų149.684%0.83579%0.793SS**  trans-94.1106.7162.100000108.7E2 Q6E2-A4 PolarHBondContact O-N 3.46Å; A4-Q6 PolarHBondContact O-N 3.48Å
5A41.9Very low39.5Very low93 Ų93151.5 Ų151.577%0.76979%0.785SS**  trans-56.3116.4-176.200000111.9R7A5-R7 VanDerWaalsContact C-N 3.26Å; A5-R7 PolarHBondContact O-N 2.88Å
6Q37Very low40Very low184 Ų184148.4 Ų148.486%0.8677%0.774SS**  trans-62.992.3160-156.695.352.100106.8A4 T8A4-Q6 PolarHBondContact O-N 3.48Å; Q6-T8 VanDerWaalsContact C-N 3.25Å; Q6-T8 PolarHBondContact O-N 2.92Å; Q6-T8 PolarHBondContact O-OG1 3.49Å
7R41.7Very low40.4Very low209 Ų209149.8 Ų149.879%0.78978%0.776SS**  trans-72.888.1174-172.2172.2179.3174.1-0107.6A5 M9A5-R7 VanDerWaalsContact C-N 3.26Å; A5-R7 PolarHBondContact O-N 2.88Å; R7-M9 PolarHBondContact O-N 3.06Å
8T38.3Very low40.6Very low119 Ų119150.9 Ų150.973%0.7377%0.774SS**  trans-52.6106.2166.6-35.90000107.7Q6 A10Q6-T8 VanDerWaalsContact C-N 3.25Å; Q6-T8 PolarHBondContact O-N 2.92Å; Q6-T8 PolarHBondContact O-OG1 3.49Å; T8-A10 PolarHBondContact O-N 3.35Å
9M33.8Very low41Very low145 Ų145147.3 Ų147.371%0.71476%0.756SS**  trans-74.790.1163.2-68.3-64.8-176.300105.6R7 V11R7-M9 PolarHBondContact O-N 3.06Å; M9-V11 PolarHBondContact O-N 3.34Å
10A36.7Very low41.5Very low79 Ų79145.6 Ų145.665%0.65376%0.758SS**  trans-52.6110.6163.800000107T8 S12T8-A10 PolarHBondContact O-N 3.35Å; A10-S12 PolarHBondContact O-N 3.4Å
11V42.6Very low42.3Very low125 Ų125146.5 Ų146.576%0.75876%0.759SS**  trans-60.898.4159149.10000104.9M9 Q13M9-V11 PolarHBondContact O-N 3.34Å; V11-Q13 HydrophobicContact CG1-CG 3.99Å; V11-Q13 PolarHBondContact O-N 2.92Å
12S39.5Very low43.7Very low110 Ų110136 Ų13677%0.76973%0.725SS**  trans-64.986.7165.3-490000106.3A10 P14A10-S12 PolarHBondContact O-N 3.4Å; S12-P14 WeakPolarHBondContact O-CD 3.34Å
13Q37.8Very low45.6Very low117 Ų117129.5 Ų129.555%0.54770%0.7SS.*  trans-56.2128160-66.9179.2-65.400106.2V11 R15V11-Q13 HydrophobicContact CG1-CG 3.99Å; V11-Q13 PolarHBondContact O-N 2.92Å; Q13-R15 HydrophobicContact CB-CG 4.05Å; Q13-R15 PolarHBondContact O-N 3.15Å
14P40.2Very low47.9Very low118 Ų118122.5 Ų122.577%0.76668%0.676SS**  trans-7085.4154.729.6-26.8000105.7S12 V16S12-P14 WeakPolarHBondContact O-CD 3.34Å; P14-V16 HydrophobicContact CB-CG2 4.22Å; P14-V16 PolarHBondContact O-N 3.4Å
15R46.8Very low50.4Low178 Ų178120.6 Ų120.667%0.67265%0.652SS**  trans-71.585.8158.6-70-169.8-159.1-139.33.9106Q13 E17Q13-R15 HydrophobicContact CB-CG 4.05Å; Q13-R15 PolarHBondContact O-N 3.15Å; R15-E17 PolarHBondContact O-N 3.37Å; R15-E17 VanDerWaalsContact O-N 3.15Å
16V47.5Very low52.8Low102 Ų102122.8 Ų122.862%0.61865%0.65SS**  trans-85.566.2164.2-167.80000106.7P14P14-V16 HydrophobicContact CB-CG2 4.22Å; P14-V16 PolarHBondContact O-N 3.4Å
17E47Very low55.5Low171 Ų171117.4 Ų117.480%0.79963%0.631SS**  trans-109.663163.6-71.8178.9145.600106.3R15R15-E17 PolarHBondContact O-N 3.37Å; R15-E17 VanDerWaalsContact O-N 3.15Å
18K44.1Very low58Low170 Ų170109 Ų10974%0.73960%0.602SS**  trans-147.215.4172.2-148.4179.1176.5176.40114.2
19D48.3Very low60.7Low83 Ų83106.1 Ų106.144%0.44458%0.584SS.*  trans-102.3-6.7-177.1-104.1-57.6000114.1E21 D22D19-E21 PolarHBondContact O-N 3.27Å; D19-D22 PolarHBondContact O-N 3.42Å
20S52.3Low63.6Low112 Ų112104.4 Ų104.478%0.78357%0.574SS**SBendtrans-71.7-30.8-175.1-176.20000113.4
21E57.2Low66.3Low166 Ų166103.4 Ų103.478%0.77656%0.557SS**G310 helixtrans-77.7-26.7-179.3-71.9177.5122.600111.8D19 C23 S24D19-E21 PolarHBondContact O-N 3.27Å; E21-C23 PolarHBondContact O-N 3.46Å; E21-S24 PolarHBondContact O-N 2.93Å
22D66.7Low68.7Low79 Ų7998.2 Ų98.242%0.42253%0.526SS..G310 helixtrans-71.9-12-176.1-94.2-42.3000113.9D19 K55D19-D22 PolarHBondContact O-N 3.42Å; D22-K55 WeakPolarHBondContact O-CE 3.38Å; D22-K55 PolarHBondContact O-NZ 2.91Å
23C78.4Confident71.3Confident52 Ų5297.2 Ų97.235%0.35151%0.511SS..G310 helixtrans-108.18.2178.2-680000114.4E21 L25E21-C23 PolarHBondContact O-N 3.46Å; C23-L25 PolarHBondContact O-N 3.43Å
24S88.4Confident73.9Confident59 Ų5996.3 Ų96.341%0.41351%0.505SS..  trans-65.2118.4-179.4-171.60000111.9E21 P27E21-S24 PolarHBondContact O-N 2.93Å; S24-P27 WeakPolarHBondContact OG-CD 3.33Å
25L92.3Very high76.3Confident61 Ų6191.7 Ų91.732%0.31948%0.476SS..  trans-100.9-19.2179.6-57.1-179.7000112.9C23 L28 V29 L52 K55 I56C23-L25 PolarHBondContact O-N 3.43Å; L25-L28 WeakPolarHBondContact O-CB 3.46Å; L25-L28 PolarHBondContact O-N 3.14Å; L25-L28 VanDerWaalsContact O-N 3.13Å; L25-V29 WeakPolarHBondContact O-CG2 3.34Å; L25-V29 PolarHBondContact O-N 2.99Å; L25-L52 HydrophobicContact CB-CD1 4.29Å; L25-L52 HydrophobicContact CD2-CD1 4.31Å; L25-K55 HydrophobicContact CD2-CB 4.12Å; L25-K55 HydrophobicContact CD2-CG 3.59Å; L25-I56 HydrophobicContact CD1-CG1 3.91Å; L25-I56 HydrophobicContact CD2-CG1 4.16Å
26L93.3Very high78.2Confident139 Ų13988.9 Ų88.973%0.72847%0.472SS*.Hα-helixtrans-57.9-42.7-173.6-80.6167.5000114L28 V29 H30L26-L28 VanDerWaalsContact C-N 3.32Å; L26-L28 PolarHBondContact O-N 3.28Å; L26-V29 PolarHBondContact O-N 3.4Å; L26-H30 WeakPolarHBondContact O-CB 3.44Å; L26-H30 PolarHBondContact O-N 3.41Å
27P93.3Very high80.1Confident72 Ų7290.4 Ų90.447%0.46848%0.477SS..Hα-helixtrans-59.4-42.2175.7-24.935.3000112.6S24 H30 D31S24-P27 WeakPolarHBondContact OG-CD 3.33Å; P27-H30 WeakPolarHBondContact O-CB 3.35Å; P27-H30 PolarHBondContact O-N 2.89Å; P27-D31 PolarHBondContact O-N 3.13Å
28L93.2Very high81.8Confident32 Ų3289.3 Ų89.317%0.16847%0.469CS..Hα-helixtrans-66.9-39.8178.8-66.5165.4000111.7L25 L26 H30 D31 V32 K51 L52 K55L25-L28 WeakPolarHBondContact O-CB 3.46Å; L25-L28 PolarHBondContact O-N 3.14Å; L25-L28 VanDerWaalsContact O-N 3.13Å; L26-L28 VanDerWaalsContact C-N 3.32Å; L26-L28 PolarHBondContact O-N 3.28Å; L28-H30 VanDerWaalsContact C-N 3.35Å; L28-D31 PolarHBondContact O-N 3.3Å; L28-V32 WeakPolarHBondContact O-CG2 3.43Å; L28-V32 PolarHBondContact O-N 3.12Å; L28-K51 HydrophobicContact CD2-CB 4.03Å; L28-L52 HydrophobicContact CB-CB 4.4Å; L28-L52 HydrophobicContact CB-CD1 3.98Å; L28-L52 HydrophobicContact CD1-CD1 4.44Å; L28-K55 HydrophobicContact CD1-CB 3.68Å; L28-K55 HydrophobicContact CD1-CG 3.76Å
29V95.3Very high83.1Confident58 Ų5884.1 Ų84.135%0.35245%0.45SS..Hα-helixtrans-63.3-43.5174.7173.50000110.8L25 L26 D31 V32 I33 L52L25-V29 WeakPolarHBondContact O-CG2 3.34Å; L25-V29 PolarHBondContact O-N 2.99Å; L26-V29 PolarHBondContact O-N 3.4Å; V29-D31 VanDerWaalsContact C-N 3.34Å; V29-D31 PolarHBondContact O-N 3.42Å; V29-V32 PolarHBondContact O-N 2.64Å; V29-I33 HydrophobicContact CG1-CD1 4Å; V29-I33 WeakPolarHBondContact O-CG1 3.33Å; V29-I33 PolarHBondContact O-N 3.43Å; V29-I33 VanDerWaalsContact O-N 3.12Å; V29-L52 HydrophobicContact CG2-CD1 4.19Å; V29-L52 HydrophobicContact CG2-CD2 4.16Å
30H95.3Very high84.1Confident109 Ų10990.1 Ų90.151%0.50547%0.472SS..Hα-helixtrans-60.7-43175.6167.4-87.5000111.8L26 P27 L28 I33 K34L26-H30 WeakPolarHBondContact O-CB 3.44Å; L26-H30 PolarHBondContact O-N 3.41Å; P27-H30 WeakPolarHBondContact O-CB 3.35Å; P27-H30 PolarHBondContact O-N 2.89Å; L28-H30 VanDerWaalsContact C-N 3.35Å; H30-I33 PolarHBondContact O-N 2.93Å; H30-K34 WeakPolarHBondContact O-CB 3.29Å; H30-K34 PolarHBondContact O-N 3.46Å
31D93Very high85.1Confident58 Ų5892.4 Ų92.431%0.3148%0.475SS..Hα-helixtrans-66.1-38.7-180-66.7-21000111.9P27 L28 V29 K34 C35 E48P27-D31 PolarHBondContact O-N 3.13Å; L28-D31 PolarHBondContact O-N 3.3Å; V29-D31 VanDerWaalsContact C-N 3.34Å; V29-D31 PolarHBondContact O-N 3.42Å; D31-K34 PolarHBondContact O-N 3.03Å; D31-C35 PolarHBondContact O-N 3.45Å; D31-C35 PolarHBondContact O-SG 3.24Å; D31-C35 VanDerWaalsContact O-SG 3.4Å; D31-E48 HydrophobicContact CB-CG 4.3Å
32V93.6Very high85.9Confident17 Ų1786 Ų8610%0.10345%0.453CS..Hα-helixtrans-57.8-50.5171.2172.40000111.2L28 V29 K34 C35 M36 V45 E48L28-V32 WeakPolarHBondContact O-CG2 3.43Å; L28-V32 PolarHBondContact O-N 3.12Å; V29-V32 PolarHBondContact O-N 2.64Å; V32-K34 VanDerWaalsContact C-N 3.32Å; V32-K34 PolarHBondContact O-N 3.23Å; V32-C35 PolarHBondContact O-N 3.14Å; V32-M36 HydrophobicContact CG1-SD 4.15Å; V32-M36 WeakPolarHBondContact O-CG 3.47Å; V32-M36 PolarHBondContact O-N 3.12Å; V32-V45 HydrophobicContact CG1-CG1 4.44Å; V32-E48 HydrophobicContact CB-CB 4.43Å; V32-E48 HydrophobicContact CG2-CB 3.57Å
33I92.9Very high86.5Confident89 Ų8989.9 Ų89.946%0.45647%0.469SS..Hα-helixtrans-60.8-44.4-180-65.1164.7000110.2V29 H30 C35 M36 D37V29-I33 HydrophobicContact CG1-CD1 4Å; V29-I33 WeakPolarHBondContact O-CG1 3.33Å; V29-I33 PolarHBondContact O-N 3.43Å; V29-I33 VanDerWaalsContact O-N 3.12Å; H30-I33 PolarHBondContact O-N 2.93Å; I33-C35 VanDerWaalsContact C-N 3.34Å; I33-C35 PolarHBondContact O-N 3.29Å; I33-M36 WeakPolarHBondContact O-CB 3.46Å; I33-M36 PolarHBondContact O-N 3.47Å; I33-M36 VanDerWaalsContact O-N 3.14Å; I33-D37 PolarHBondContact O-N 3.46Å
34K92.3Very high86.9Confident97 Ų9790.7 Ų90.742%0.42247%0.47SS..Hα-helixtrans-63.5-36.5179.1-175.6180176.1-172.80112.9H30 D31 V32 K38H30-K34 WeakPolarHBondContact O-CB 3.29Å; H30-K34 PolarHBondContact O-N 3.46Å; D31-K34 PolarHBondContact O-N 3.03Å; V32-K34 VanDerWaalsContact C-N 3.32Å; V32-K34 PolarHBondContact O-N 3.23Å; K34-K38 HydrophobicContact CG-CD 4.45Å; K34-K38 WeakPolarHBondContact O-CG 3.5Å; K34-K38 PolarHBondContact O-N 3.26Å
35C90.4Very high87Confident21 Ų2189.2 Ų89.214%0.14246%0.458CS..Hα-helixtrans-69.8-38.1173.3-73.80000111.5D31 V32 I33 D37 K38 D39 D44 V45D31-C35 PolarHBondContact O-N 3.45Å; D31-C35 PolarHBondContact O-SG 3.24Å; D31-C35 VanDerWaalsContact O-SG 3.4Å; V32-C35 PolarHBondContact O-N 3.14Å; I33-C35 VanDerWaalsContact C-N 3.34Å; I33-C35 PolarHBondContact O-N 3.29Å; C35-D37 VanDerWaalsContact C-N 3.27Å; C35-D37 PolarHBondContact O-N 3.01Å; C35-K38 PolarHBondContact O-N 3.03Å; C35-K38 VanDerWaalsContact O-N 3.15Å; C35-D39 PolarHBondContact O-N 3.21Å; C35-D44 HydrophobicContact CB-CB 4.26Å; C35-V45 HydrophobicContact CB-CG2 3.82Å
36M87.7Confident86.9Confident119 Ų11991.8 Ų91.859%0.58647%0.468SS*.Hα-helixtrans-62.1-35.9176.3-70.9176.465.400112.4V32 I33 K38 V45V32-M36 HydrophobicContact CG1-SD 4.15Å; V32-M36 WeakPolarHBondContact O-CG 3.47Å; V32-M36 PolarHBondContact O-N 3.12Å; I33-M36 WeakPolarHBondContact O-CB 3.46Å; I33-M36 PolarHBondContact O-N 3.47Å; I33-M36 VanDerWaalsContact O-N 3.14Å; M36-K38 VanDerWaalsContact C-N 3.3Å; M36-K38 PolarHBondContact O-N 3.36Å; M36-V45 HydrophobicContact CB-CG2 4.29Å; M36-V45 HydrophobicContact CG-CB 4.39Å; M36-V45 HydrophobicContact CG-CG1 3.74Å; M36-V45 HydrophobicContact CG-CG2 3.66Å; M36-V45 HydrophobicContact SD-CG1 4.5Å
37D86.4Confident86.9Confident135 Ų13590.3 Ų90.372%0.72246%0.458SS*.Hα-helixtrans-74.1-20178.4-68.6-24.1000113.3I33 C35I33-D37 PolarHBondContact O-N 3.46Å; C35-D37 VanDerWaalsContact C-N 3.27Å; C35-D37 PolarHBondContact O-N 3.01Å
38K83.6Confident86.9Confident147 Ų14787.9 Ų87.964%0.63944%0.44SS*.Hα-helixtrans-106.7-37.3-173.3-69.6-177.4178.1-159.10114.2K34 C35 M36K34-K38 HydrophobicContact CG-CD 4.45Å; K34-K38 WeakPolarHBondContact O-CG 3.5Å; K34-K38 PolarHBondContact O-N 3.26Å; C35-K38 PolarHBondContact O-N 3.03Å; C35-K38 VanDerWaalsContact O-N 3.15Å; M36-K38 VanDerWaalsContact C-N 3.3Å; M36-K38 PolarHBondContact O-N 3.36Å
39D71.8Confident87Confident62 Ų6290.3 Ų90.333%0.33245%0.453SS..  trans-114.6105.3-171.8-68.8-47.8000112.4C35 D41 G42 D44C35-D39 PolarHBondContact O-N 3.21Å; D39-D41 VanDerWaalsContact C-N 3.29Å; D39-D41 PolarHBondContact O-N 3.48Å; D39-G42 PolarHBondContact O-N 2.66Å; D39-D44 WeakPolarHBondContact OD2-CB 3.34Å
40K69.9Low87.1Confident209 Ų20990.9 Ų90.991%0.90945%0.453SS*.THydrogen-bonded Turntrans-72.4-21.3176.9-65.3-171.8179.81800113.6G42K40-G42 VanDerWaalsContact C-N 3.34Å
41D71.7Confident87.1Confident160 Ų16090.1 Ų90.186%0.85645%0.448SS*.THydrogen-bonded Turntrans-86.2-6.5179.2-58.7-48.7000112.7D39 Q43D39-D41 VanDerWaalsContact C-N 3.29Å; D39-D41 PolarHBondContact O-N 3.48Å; D41-Q43 VanDerWaalsContact C-N 3.27Å; D41-Q43 PolarHBondContact O-N 2.95Å; D41-Q43 VanDerWaalsContact O-N 3.14Å
42G74.3Confident87.2Confident31 Ų3188.5 Ų88.532%0.3244%0.439SS..  trans72.62.516500000117.2D39 K40 V45 H46D39-G42 PolarHBondContact O-N 2.66Å; K40-G42 VanDerWaalsContact C-N 3.34Å; G42-V45 PolarHBondContact O-N 3.4Å; G42-H46 PolarHBondContact O-N 3.42Å; G42-H46 VanDerWaalsContact O-N 3.12Å
43Q80.4Confident87.3Confident160 Ų16094.5 Ų94.575%0.74846%0.464SS*.Hα-helixtrans-65.3-47.1-177.4-168.9179.8-24.400112.5D41 V45 H46 Q47D41-Q43 VanDerWaalsContact C-N 3.27Å; D41-Q43 PolarHBondContact O-N 2.95Å; D41-Q43 VanDerWaalsContact O-N 3.14Å; Q43-V45 VanDerWaalsContact C-N 3.32Å; Q43-V45 PolarHBondContact O-N 3.21Å; Q43-H46 WeakPolarHBondContact O-CB 3.47Å; Q43-H46 PolarHBondContact O-N 3.44Å; Q43-Q47 PolarHBondContact O-N 3.31Å
44D84.9Confident87.5Confident70 Ų7094.9 Ų94.937%0.37447%0.47SS..Hα-helixtrans-68.3-33.6179.2-77.213.1000111.7C35 D39 H46 Q47 E48C35-D44 HydrophobicContact CB-CB 4.26Å; D39-D44 WeakPolarHBondContact OD2-CB 3.34Å; D44-H46 VanDerWaalsContact C-N 3.33Å; D44-H46 PolarHBondContact O-N 3.26Å; D44-Q47 PolarHBondContact O-N 2.94Å; D44-E48 PolarHBondContact O-N 2.99Å
45V91Very high87.6Confident27 Ų2792.8 Ų92.816%0.16446%0.461CS..Hα-helixtrans-60.5-43.9173.3-179.80000111V32 C35 M36 G42 Q43 Q47 E48 L49V32-V45 HydrophobicContact CG1-CG1 4.44Å; C35-V45 HydrophobicContact CB-CG2 3.82Å; M36-V45 HydrophobicContact CB-CG2 4.29Å; M36-V45 HydrophobicContact CG-CB 4.39Å; M36-V45 HydrophobicContact CG-CG1 3.74Å; M36-V45 HydrophobicContact CG-CG2 3.66Å; M36-V45 HydrophobicContact SD-CG1 4.5Å; G42-V45 PolarHBondContact O-N 3.4Å; Q43-V45 VanDerWaalsContact C-N 3.32Å; Q43-V45 PolarHBondContact O-N 3.21Å; V45-Q47 VanDerWaalsContact C-N 3.31Å; V45-Q47 PolarHBondContact O-N 3.1Å; V45-E48 PolarHBondContact O-N 3.18Å; V45-L49 VanDerWaalsContact O-CB 3.29Å; V45-L49 WeakPolarHBondContact O-CB 3.39Å; V45-L49 PolarHBondContact O-N 3.47Å
46H91.6Very high87.8Confident116 Ų11695.1 Ų95.154%0.53747%0.471SS..Hα-helixtrans-62.2-40.7178.1-170.478.7000111.5G42 Q43 D44 L49 M50G42-H46 PolarHBondContact O-N 3.42Å; G42-H46 VanDerWaalsContact O-N 3.12Å; Q43-H46 WeakPolarHBondContact O-CB 3.47Å; Q43-H46 PolarHBondContact O-N 3.44Å; D44-H46 VanDerWaalsContact C-N 3.33Å; D44-H46 PolarHBondContact O-N 3.26Å; H46-L49 PolarHBondContact O-N 3.15Å; H46-M50 WeakPolarHBondContact O-CG 2.94Å; H46-M50 PolarHBondContact O-N 3.44Å
47Q92.7Very high88.2Confident107 Ų10793.1 Ų93.150%0.546%0.461SS..Hα-helixtrans-63.5-47.7178.1-171-178.918.100112Q43 D44 V45 L49 M50 K51Q43-Q47 PolarHBondContact O-N 3.31Å; D44-Q47 PolarHBondContact O-N 2.94Å; V45-Q47 VanDerWaalsContact C-N 3.31Å; V45-Q47 PolarHBondContact O-N 3.1Å; Q47-L49 VanDerWaalsContact C-N 3.33Å; Q47-L49 PolarHBondContact O-N 3Å; Q47-M50 PolarHBondContact O-N 3.24Å; Q47-K51 PolarHBondContact O-N 3.41Å; Q47-K51 VanDerWaalsContact O-N 3.1Å
48E93.8Very high88.5Confident22 Ų2291.5 Ų91.510%0.10345%0.447CS..Hα-helixtrans-65.4-36.6177.7-68.5-51.3133.700112.2D31 V32 D44 V45 M50 K51 L52D31-E48 HydrophobicContact CB-CG 4.3Å; V32-E48 HydrophobicContact CB-CB 4.43Å; V32-E48 HydrophobicContact CG2-CB 3.57Å; D44-E48 PolarHBondContact O-N 2.99Å; V45-E48 PolarHBondContact O-N 3.18Å; E48-M50 VanDerWaalsContact C-N 3.33Å; E48-M50 PolarHBondContact O-N 2.91Å; E48-K51 WeakPolarHBondContact O-CB 3.47Å; E48-K51 PolarHBondContact O-N 3.46Å; E48-K51 IonicContact OE1-NZ 2.64Å; E48-K51 PolarHBondContact OE1-NZ 3.31Å; E48-K51 WeakPolarHBondContact OE2-CD 3.35Å; E48-K51 IonicContact OE2-NZ 3.74Å; E48-L52 PolarHBondContact O-N 2.8Å
49L94.9Very high88.9Confident82 Ų8285.2 Ų85.243%0.42942%0.423SS..Hα-helixtrans-63.8-38.8174.7-168.668.4000112V45 H46 Q47 L52 K53V45-L49 VanDerWaalsContact O-CB 3.29Å; V45-L49 WeakPolarHBondContact O-CB 3.39Å; V45-L49 PolarHBondContact O-N 3.47Å; H46-L49 PolarHBondContact O-N 3.15Å; Q47-L49 VanDerWaalsContact C-N 3.33Å; Q47-L49 PolarHBondContact O-N 3Å; L49-L52 PolarHBondContact O-N 2.99Å; L49-K53 WeakPolarHBondContact O-CB 3.5Å; L49-K53 PolarHBondContact O-N 2.97Å
50M96.2Very high90Very high71 Ų7189.8 Ų89.835%0.3544%0.435SS..Hα-helixtrans-65.3-38174.4-72.7-55.8115.700112.3H46 Q47 E48 K53 T54H46-M50 WeakPolarHBondContact O-CG 2.94Å; H46-M50 PolarHBondContact O-N 3.44Å; Q47-M50 PolarHBondContact O-N 3.24Å; E48-M50 VanDerWaalsContact C-N 3.33Å; E48-M50 PolarHBondContact O-N 2.91Å; M50-K53 HydrophobicContact SD-CD 4.47Å; M50-T54 WeakPolarHBondContact O-CB 3.49Å; M50-T54 PolarHBondContact O-N 3.41Å; M50-T54 PolarHBondContact O-OG1 2.96Å
51K95.1Very high91.1Very high92 Ų9284.4 Ų84.440%0.441%0.413SS..Hα-helixtrans-63.3-46.7173.9-68.8171.6-176.7170.40111L28 Q47 E48 T54 K55L28-K51 HydrophobicContact CD2-CB 4.03Å; Q47-K51 PolarHBondContact O-N 3.41Å; Q47-K51 VanDerWaalsContact O-N 3.1Å; E48-K51 WeakPolarHBondContact O-CB 3.47Å; E48-K51 PolarHBondContact O-N 3.46Å; E48-K51 IonicContact OE1-NZ 2.64Å; E48-K51 PolarHBondContact OE1-NZ 3.31Å; E48-K51 WeakPolarHBondContact OE2-CD 3.35Å; E48-K51 IonicContact OE2-NZ 3.74Å; K51-T54 PolarHBondContact O-N 3.21Å; K51-K55 WeakPolarHBondContact O-CB 3.41Å; K51-K55 PolarHBondContact O-N 2.94Å
52L95.6Very high92.1Very high25 Ų2579.8 Ų79.813%0.13139%0.387CS..Hα-helixtrans-59.2-48.3176.6-18060.9000111.8L25 L28 V29 E48 L49 T54 K55 I56L25-L52 HydrophobicContact CB-CD1 4.29Å; L25-L52 HydrophobicContact CD2-CD1 4.31Å; L28-L52 HydrophobicContact CB-CB 4.4Å; L28-L52 HydrophobicContact CB-CD1 3.98Å; L28-L52 HydrophobicContact CD1-CD1 4.44Å; V29-L52 HydrophobicContact CG2-CD1 4.19Å; V29-L52 HydrophobicContact CG2-CD2 4.16Å; E48-L52 PolarHBondContact O-N 2.8Å; L49-L52 PolarHBondContact O-N 2.99Å; L52-T54 VanDerWaalsContact C-N 3.34Å; L52-T54 PolarHBondContact O-N 2.96Å; L52-K55 PolarHBondContact O-N 3.4Å; L52-I56 HydrophobicContact CD1-CD1 4.1Å; L52-I56 HydrophobicContact CD1-CG1 4.39Å; L52-I56 HydrophobicContact CG-CD1 4.01Å; L52-I56 WeakPolarHBondContact O-CG1 3.45Å; L52-I56 PolarHBondContact O-N 2.98Å
53K96.5Very high92.9Very high143 Ų14382.7 Ų82.762%0.62239%0.394SS*.Hα-helixtrans-56.4-47.8176.4-179.8-177.5176.1-176.60111.7L49 M50 K55 I56 Q57L49-K53 WeakPolarHBondContact O-CB 3.5Å; L49-K53 PolarHBondContact O-N 2.97Å; M50-K53 HydrophobicContact SD-CD 4.47Å; K53-K55 VanDerWaalsContact C-N 3.33Å; K53-K55 PolarHBondContact O-N 3.21Å; K53-I56 PolarHBondContact O-N 3.01Å; K53-Q57 WeakPolarHBondContact O-CB 3.41Å; K53-Q57 PolarHBondContact O-N 2.84Å
54T95.9Very high93.5Very high97 Ų9779.2 Ų79.260%0.59539%0.388SS*.Hα-helixtrans-60.9-43179-58.20000111.3M50 K51 L52 Q57 K58M50-T54 WeakPolarHBondContact O-CB 3.49Å; M50-T54 PolarHBondContact O-N 3.41Å; M50-T54 PolarHBondContact O-OG1 2.96Å; K51-T54 PolarHBondContact O-N 3.21Å; L52-T54 VanDerWaalsContact C-N 3.34Å; L52-T54 PolarHBondContact O-N 2.96Å; T54-Q57 PolarHBondContact O-N 2.93Å; T54-K58 PolarHBondContact O-N 3.37Å
55K94.8Very high93.8Very high52 Ų5282.1 Ų82.123%0.22640%0.403CS..Hα-helixtrans-64.7-43179.1-169.171.3176.3-176.80112D22 L25 L28 K51 L52 K53 Q57 K58 A59D22-K55 WeakPolarHBondContact O-CE 3.38Å; D22-K55 PolarHBondContact O-NZ 2.91Å; L25-K55 HydrophobicContact CD2-CB 4.12Å; L25-K55 HydrophobicContact CD2-CG 3.59Å; L28-K55 HydrophobicContact CD1-CB 3.68Å; L28-K55 HydrophobicContact CD1-CG 3.76Å; K51-K55 WeakPolarHBondContact O-CB 3.41Å; K51-K55 PolarHBondContact O-N 2.94Å; L52-K55 PolarHBondContact O-N 3.4Å; K53-K55 VanDerWaalsContact C-N 3.33Å; K53-K55 PolarHBondContact O-N 3.21Å; K55-Q57 VanDerWaalsContact C-N 3.34Å; K55-K58 PolarHBondContact O-N 3.42Å; K55-A59 WeakPolarHBondContact O-CB 3.38Å; K55-A59 PolarHBondContact O-N 3.25Å
56I95.3Very high93.8Very high70 Ų7085.8 Ų85.836%0.35942%0.419SS..Hα-helixtrans-60.7-45.5174.7-69.3167.3000110.5L25 L52 K53 K58 A59 R60L25-I56 HydrophobicContact CD1-CG1 3.91Å; L25-I56 HydrophobicContact CD2-CG1 4.16Å; L52-I56 HydrophobicContact CD1-CD1 4.1Å; L52-I56 HydrophobicContact CD1-CG1 4.39Å; L52-I56 HydrophobicContact CG-CD1 4.01Å; L52-I56 WeakPolarHBondContact O-CG1 3.45Å; L52-I56 PolarHBondContact O-N 2.98Å; K53-I56 PolarHBondContact O-N 3.01Å; I56-K58 PolarHBondContact O-N 2.86Å; I56-A59 PolarHBondContact O-N 3.45Å; I56-R60 HydrophobicContact CG2-CG 4.5Å; I56-R60 WeakPolarHBondContact O-CG 3.46Å; I56-R60 PolarHBondContact O-N 2.91Å
57Q95.8Very high93.7Very high77 Ų7786.1 Ų86.136%0.3643%0.432SS..Hα-helixtrans-63.3-43.8-179.5-175.755.131.300111.6K53 T54 K55 A59 R60 E61K53-Q57 WeakPolarHBondContact O-CB 3.41Å; K53-Q57 PolarHBondContact O-N 2.84Å; T54-Q57 PolarHBondContact O-N 2.93Å; K55-Q57 VanDerWaalsContact C-N 3.34Å; Q57-A59 VanDerWaalsContact C-N 3.35Å; Q57-A59 PolarHBondContact O-N 3.49Å; Q57-R60 WeakPolarHBondContact O-CB 3.36Å; Q57-R60 PolarHBondContact O-N 3.37Å; Q57-R60 VanDerWaalsContact OE1-NH1 3.07Å; Q57-E61 WeakPolarHBondContact CG-OE1 3.5Å; Q57-E61 PolarHBondContact NE2-OE1 3.34Å; Q57-E61 WeakPolarHBondContact O-CG 3.39Å; Q57-E61 PolarHBondContact O-N 3.17Å
58K93.1Very high93.7Very high102 Ų10282.3 Ų82.344%0.44342%0.421SS..Hα-helixtrans-58.7-45.1173.2-174.9-176.8178-174.40111.9T54 K55 I56 R60 E61 Q62T54-K58 PolarHBondContact O-N 3.37Å; K55-K58 PolarHBondContact O-N 3.42Å; I56-K58 PolarHBondContact O-N 2.86Å; K58-R60 VanDerWaalsContact C-N 3.33Å; K58-R60 PolarHBondContact O-N 2.91Å; K58-E61 PolarHBondContact O-N 3.32Å; K58-Q62 WeakPolarHBondContact O-CG 3.42Å; K58-Q62 PolarHBondContact O-N 2.99Å
59A92.4Very high93.7Very high15 Ų1585.1 Ų85.112%0.12444%0.436CS..Hα-helixtrans-62.3-40.7178.300000111.8K55 I56 Q57 Q62 I63K55-A59 WeakPolarHBondContact O-CB 3.38Å; K55-A59 PolarHBondContact O-N 3.25Å; I56-A59 PolarHBondContact O-N 3.45Å; Q57-A59 VanDerWaalsContact C-N 3.35Å; Q57-A59 PolarHBondContact O-N 3.49Å; A59-Q62 PolarHBondContact O-N 2.89Å; A59-I63 VanDerWaalsContact O-CG1 3.3Å; A59-I63 WeakPolarHBondContact O-CG1 3.36Å; A59-I63 PolarHBondContact O-N 3.04Å
60R93.9Very high93.7Very high157 Ų15788.7 Ų88.759%0.59246%0.456SS*.Hα-helixtrans-61.5-43.9174.3-71.5177.271.6-145.35.3112.1I56 Q57 K58 I63 S64I56-R60 HydrophobicContact CG2-CG 4.5Å; I56-R60 WeakPolarHBondContact O-CG 3.46Å; I56-R60 PolarHBondContact O-N 2.91Å; Q57-R60 WeakPolarHBondContact O-CB 3.36Å; Q57-R60 PolarHBondContact O-N 3.37Å; Q57-R60 VanDerWaalsContact OE1-NH1 3.07Å; K58-R60 VanDerWaalsContact C-N 3.33Å; K58-R60 PolarHBondContact O-N 2.91Å; R60-I63 PolarHBondContact O-N 3.01Å; R60-S64 WeakPolarHBondContact O-CB 3.3Å; R60-S64 PolarHBondContact O-N 2.97Å
61E93.9Very high93.6Very high96 Ų9687.5 Ų87.545%0.44945%0.454SS..Hα-helixtrans-63.9-40.6176.5-73.8165.4-162.100111.8Q57 K58 S64 N65Q57-E61 WeakPolarHBondContact CG-OE1 3.5Å; Q57-E61 PolarHBondContact NE2-OE1 3.34Å; Q57-E61 WeakPolarHBondContact O-CG 3.39Å; Q57-E61 PolarHBondContact O-N 3.17Å; K58-E61 PolarHBondContact O-N 3.32Å; E61-S64 PolarHBondContact O-N 2.91Å; E61-N65 WeakPolarHBondContact O-CB 3.47Å; E61-N65 VanDerWaalsContact O-CG 3.24Å; E61-N65 PolarHBondContact O-N 3.35Å; E61-N65 PolarHBondContact O-ND2 3.22Å
62Q91.3Very high93.7Very high64 Ų6485.1 Ų85.130%0.29945%0.449SS..Hα-helixtrans-61-45.9174.5-74.1175-47.900111.9K58 A59 N65 M66K58-Q62 WeakPolarHBondContact O-CG 3.42Å; K58-Q62 PolarHBondContact O-N 2.99Å; A59-Q62 PolarHBondContact O-N 2.89Å; Q62-N65 PolarHBondContact O-N 3.24Å; Q62-M66 PolarHBondContact O-N 2.88Å; Q62-M66 VanDerWaalsContact O-N 3.17Å
63I91.3Very high93.7Very high91 Ų9188.2 Ų88.247%0.46747%0.471SS..Hα-helixtrans-62.2-45.5176.2-67164.1000110.5A59 R60 N65 M66 I69A59-I63 VanDerWaalsContact O-CG1 3.3Å; A59-I63 WeakPolarHBondContact O-CG1 3.36Å; A59-I63 PolarHBondContact O-N 3.04Å; R60-I63 PolarHBondContact O-N 3.01Å; I63-N65 PolarHBondContact O-N 3.49Å; I63-M66 WeakPolarHBondContact O-CB 3.47Å; I63-M66 PolarHBondContact O-N 3.07Å; I63-I69 HydrophobicContact CG2-CD1 4.18Å; I63-I69 HydrophobicContact CG2-CG1 4.32Å
64S92.8Very high93.8Very high88 Ų8887.8 Ų87.862%0.61547%0.471SS*.Hα-helixtrans-64.5-29.5-179.7-170.70000113.1R60 E61 M66R60-S64 WeakPolarHBondContact O-CB 3.3Å; R60-S64 PolarHBondContact O-N 2.97Å; E61-S64 PolarHBondContact O-N 2.91Å; S64-M66 VanDerWaalsContact C-N 3.33Å
65N91.1Very high93.8Very high130 Ų13088.6 Ų88.670%0.69547%0.469SS*.THydrogen-bonded Turntrans-89.80.8177.3-67.6-36.3000112.6E61 Q62 I63 P67E61-N65 WeakPolarHBondContact O-CB 3.47Å; E61-N65 VanDerWaalsContact O-CG 3.24Å; E61-N65 PolarHBondContact O-N 3.35Å; E61-N65 PolarHBondContact O-ND2 3.22Å; Q62-N65 PolarHBondContact O-N 3.24Å; I63-N65 PolarHBondContact O-N 3.49Å; N65-P67 WeakPolarHBondContact O-CD 3.38Å
66M91.5Very high93.9Very high104 Ų10490.2 Ų90.251%0.51248%0.477SS..SBendtrans-71.1123.4-177.6-171.2177.3-66.300110.3Q62 I63 S64 G68 I69Q62-M66 PolarHBondContact O-N 2.88Å; Q62-M66 VanDerWaalsContact O-N 3.17Å; I63-M66 WeakPolarHBondContact O-CB 3.47Å; I63-M66 PolarHBondContact O-N 3.07Å; S64-M66 VanDerWaalsContact C-N 3.33Å; M66-G68 PolarHBondContact O-N 3.34Å; M66-I69 HydrophobicContact CB-CB 4.37Å; M66-I69 WeakPolarHBondContact O-CB 3.32Å; M66-I69 VanDerWaalsContact O-CG2 3.26Å; M66-I69 WeakPolarHBondContact O-CG2 3.39Å; M66-I69 PolarHBondContact O-N 3.32Å
67P90.3Very high94Very high123 Ų12393.7 Ų93.780%0.79949%0.491SS*.THydrogen-bonded Turntrans-59.4133179-23.833.6000111.8N65 I69N65-P67 WeakPolarHBondContact O-CD 3.38Å; P67-I69 VanDerWaalsContact C-N 3.31Å; P67-I69 PolarHBondContact O-N 2.96Å
68G92.7Very high94.1Very high27 Ų2796.4 Ų96.428%0.27850%0.504SS..THydrogen-bonded Turntrans81.31.8178.100000114.9M66 D70 S71 Q76M66-G68 PolarHBondContact O-N 3.34Å; G68-D70 PolarHBondContact O-N 2.98Å; G68-D70 VanDerWaalsContact O-N 3.17Å; G68-S71 PolarHBondContact O-N 3.43Å; G68-Q76 PolarHBondContact O-NE2 3.14Å
69I93.8Very high94.3Very high82 Ų8297.2 Ų97.242%0.42151%0.509SS..THydrogen-bonded Turntrans-58.2-28.2177.9-165.862.3000113I63 M66 P67 S71I63-I69 HydrophobicContact CG2-CD1 4.18Å; I63-I69 HydrophobicContact CG2-CG1 4.32Å; M66-I69 HydrophobicContact CB-CB 4.37Å; M66-I69 WeakPolarHBondContact O-CB 3.32Å; M66-I69 VanDerWaalsContact O-CG2 3.26Å; M66-I69 WeakPolarHBondContact O-CG2 3.39Å; M66-I69 PolarHBondContact O-N 3.32Å; P67-I69 VanDerWaalsContact C-N 3.31Å; P67-I69 PolarHBondContact O-N 2.96Å; I69-S71 VanDerWaalsContact C-N 3.34Å
70D94.8Very high94.5Very high156 Ų156100.1 Ų100.183%0.83452%0.522SS*.THydrogen-bonded Turntrans-84.9-4.6177.9-54.3-55.4000113.7G68G68-D70 PolarHBondContact O-N 2.98Å; G68-D70 VanDerWaalsContact O-N 3.17Å
71S94.6Very high94.7Very high46 Ų4695.1 Ų95.132%0.32252%0.515SS..SBendtrans-104.7144.9-176.1-55.30000111.7G68 I69G68-S71 PolarHBondContact O-N 3.43Å; I69-S71 VanDerWaalsContact C-N 3.34Å
72S96.9Very high94.9Very high42 Ų4293.3 Ų93.329%0.29451%0.51SS..  trans-66.5152.7172.464.80000111.3Q74 E75 Q76S72-Q74 PolarHBondContact O-N 3.33Å; S72-Q74 VanDerWaalsContact O-N 3.14Å; S72-E75 WeakPolarHBondContact CB-OE2 3.26Å; S72-E75 PolarHBondContact N-OE2 3.41Å; S72-E75 PolarHBondContact O-N 3.42Å; S72-E75 VanDerWaalsContact O-N 3.1Å; S72-E75 WeakPolarHBondContact OG-CB 3.18Å; S72-E75 WeakPolarHBondContact OG-CG 3.45Å; S72-E75 PolarHBondContact OG-N 3Å; S72-E75 PolarHBondContact OG-OE2 2.95Å; S72-Q76 WeakPolarHBondContact O-CG 3.4Å; S72-Q76 PolarHBondContact O-N 2.73Å
73P95.9Very high95.2Very high91 Ų9194.4 Ų94.459%0.59152%0.518SS*.Hα-helixtrans-53.2-35.9175.6-27.835.3000113.4Q77P73-Q77 WeakPolarHBondContact O-CB 3.48Å; P73-Q77 PolarHBondContact O-N 3.1Å
74Q97.6Very high95.6Very high133 Ų13398 Ų9862%0.62153%0.526SS*.Hα-helixtrans-68.2-43.9179-64.980.1-1.800111.6S72 Q77 H78S72-Q74 PolarHBondContact O-N 3.33Å; S72-Q74 VanDerWaalsContact O-N 3.14Å; Q74-Q77 PolarHBondContact O-N 3.04Å; Q74-H78 WeakPolarHBondContact O-CB 3.36Å; Q74-H78 PolarHBondContact O-N 3.43Å
75E97.1Very high95.8Very high115 Ų11598.1 Ų98.154%0.53752%0.516SS..Hα-helixtrans-63.1-44175.6-74.5163.415400111.4S72 Q77 H78 Q79S72-E75 WeakPolarHBondContact CB-OE2 3.26Å; S72-E75 PolarHBondContact N-OE2 3.41Å; S72-E75 PolarHBondContact O-N 3.42Å; S72-E75 VanDerWaalsContact O-N 3.1Å; S72-E75 WeakPolarHBondContact OG-CB 3.18Å; S72-E75 WeakPolarHBondContact OG-CG 3.45Å; S72-E75 PolarHBondContact OG-N 3Å; S72-E75 PolarHBondContact OG-OE2 2.95Å; E75-Q77 VanDerWaalsContact C-N 3.32Å; E75-Q77 PolarHBondContact O-N 3.49Å; E75-H78 PolarHBondContact O-N 3.05Å; E75-Q79 WeakPolarHBondContact O-CB 3.42Å; E75-Q79 PolarHBondContact O-N 3.3Å
76Q96.6Very high96.2Very high85 Ų8596 Ų9640%0.39750%0.502SS..Hα-helixtrans-58.8-44.9175.5-67.7-178.4-7.400111.3G68 S72 Q79 L80G68-Q76 PolarHBondContact O-NE2 3.14Å; S72-Q76 WeakPolarHBondContact O-CG 3.4Å; S72-Q76 PolarHBondContact O-N 2.73Å; Q76-Q79 PolarHBondContact O-N 2.95Å; Q76-L80 WeakPolarHBondContact O-CB 3.4Å; Q76-L80 PolarHBondContact O-N 3.17Å
77Q97.4Very high96.5Very high143 Ų14395.2 Ų95.267%0.66850%0.503SS*.Hα-helixtrans-65.5-40.2178.8-169.6173.219.400112.1P73 Q74 E75 L80 A81P73-Q77 WeakPolarHBondContact O-CB 3.48Å; P73-Q77 PolarHBondContact O-N 3.1Å; Q74-Q77 PolarHBondContact O-N 3.04Å; E75-Q77 VanDerWaalsContact C-N 3.32Å; E75-Q77 PolarHBondContact O-N 3.49Å; Q77-L80 PolarHBondContact O-N 3.28Å; Q77-A81 PolarHBondContact O-N 2.99Å
78H97.9Very high96.9Very high134 Ų13496.2 Ų96.262%0.6249%0.491SS*.Hα-helixtrans-64.3-44.4175.7-178.870000112.1Q74 E75 L80 A81 T82Q74-H78 WeakPolarHBondContact O-CB 3.36Å; Q74-H78 PolarHBondContact O-N 3.43Å; E75-H78 PolarHBondContact O-N 3.05Å; H78-L80 VanDerWaalsContact C-N 3.33Å; H78-L80 PolarHBondContact O-N 3.35Å; H78-A81 PolarHBondContact O-N 3.41Å; H78-T82 PolarHBondContact O-N 3.3Å; H78-T82 PolarHBondContact O-OG1 3.25Å
79Q96.6Very high97.1Very high119 Ų11998.3 Ų98.356%0.55650%0.498SS*.Hα-helixtrans-61.9-42.5176.4-169177.53000111.1E75 Q76 A81 T82 L83E75-Q79 WeakPolarHBondContact O-CB 3.42Å; E75-Q79 PolarHBondContact O-N 3.3Å; Q76-Q79 PolarHBondContact O-N 2.95Å; Q79-A81 PolarHBondContact O-N 3.02Å; Q79-T82 WeakPolarHBondContact O-CB 3.45Å; Q79-T82 PolarHBondContact O-N 3.42Å; Q79-L83 HydrophobicContact CG-CD1 4.33Å; Q79-L83 WeakPolarHBondContact O-CG 3.45Å; Q79-L83 PolarHBondContact O-N 3.5Å
80L96.8Very high97.3Very high76 Ų76100.6 Ų100.640%0.39851%0.505SS..Hα-helixtrans-61-44.5175.3178.961.9000112.2Q76 Q77 H78 T82 L83 R84Q76-L80 WeakPolarHBondContact O-CB 3.4Å; Q76-L80 PolarHBondContact O-N 3.17Å; Q77-L80 PolarHBondContact O-N 3.28Å; H78-L80 VanDerWaalsContact C-N 3.33Å; H78-L80 PolarHBondContact O-N 3.35Å; L80-T82 VanDerWaalsContact C-N 3.34Å; L80-L83 PolarHBondContact O-N 2.95Å; L80-R84 VanDerWaalsContact O-CG 3.32Å; L80-R84 WeakPolarHBondContact O-CG 3.33Å; L80-R84 PolarHBondContact O-N 3.46Å
81A98Very high97.4Very high53 Ų5397.2 Ų97.244%0.43849%0.487SS..Hα-helixtrans-61.1-44.7176.400000111.4Q77 H78 Q79 R84 E85Q77-A81 PolarHBondContact O-N 2.99Å; H78-A81 PolarHBondContact O-N 3.41Å; Q79-A81 PolarHBondContact O-N 3.02Å; A81-R84 PolarHBondContact O-N 2.9Å; A81-E85 PolarHBondContact O-N 2.92Å
82T98.1Very high97.4Very high57 Ų5799.4 Ų99.435%0.3549%0.492SS..Hα-helixtrans-59.9-47.7176.6-60.70000111.8H78 Q79 L80 R84 E85 Q86H78-T82 PolarHBondContact O-N 3.3Å; H78-T82 PolarHBondContact O-OG1 3.25Å; Q79-T82 WeakPolarHBondContact O-CB 3.45Å; Q79-T82 PolarHBondContact O-N 3.42Å; L80-T82 VanDerWaalsContact C-N 3.34Å; T82-R84 VanDerWaalsContact C-N 3.33Å; T82-R84 PolarHBondContact O-N 2.99Å; T82-E85 PolarHBondContact O-N 3.26Å; T82-Q86 WeakPolarHBondContact O-CG 3.5Å; T82-Q86 PolarHBondContact O-N 2.88Å
83L98Very high97.3Very high87 Ų87101.7 Ų101.746%0.45550%0.5SS..Hα-helixtrans-61.5-40.6178.3-73.1170.7000112.1Q79 L80 Q86 V87Q79-L83 HydrophobicContact CG-CD1 4.33Å; Q79-L83 WeakPolarHBondContact O-CG 3.45Å; Q79-L83 PolarHBondContact O-N 3.5Å; L80-L83 PolarHBondContact O-N 2.95Å; L83-Q86 PolarHBondContact O-N 3.28Å; L83-V87 WeakPolarHBondContact O-CG2 3.43Å; L83-V87 PolarHBondContact O-N 3.01Å
84R98.3Very high97.2Very high168 Ų168102 Ų10263%0.63450%0.496SS*.Hα-helixtrans-61-44.2175.7-75.6172.2173.7162.8-1.1111.8L80 A81 T82 V87 R88L80-R84 VanDerWaalsContact O-CG 3.32Å; L80-R84 WeakPolarHBondContact O-CG 3.33Å; L80-R84 PolarHBondContact O-N 3.46Å; A81-R84 PolarHBondContact O-N 2.9Å; T82-R84 VanDerWaalsContact C-N 3.33Å; T82-R84 PolarHBondContact O-N 2.99Å; R84-V87 PolarHBondContact O-N 3.27Å; R84-R88 PolarHBondContact O-N 2.86Å
85E98.6Very high96.9Very high89 Ų89101.1 Ų101.142%0.41649%0.493SS..Hα-helixtrans-68.1-37.1178.4-170.355.7-14500112A81 T82 V87 R88 T89A81-E85 PolarHBondContact O-N 2.92Å; T82-E85 PolarHBondContact O-N 3.26Å; E85-V87 PolarHBondContact O-N 2.81Å; E85-R88 WeakPolarHBondContact O-CB 3.43Å; E85-R88 PolarHBondContact O-N 3.25Å; E85-R88 IonicContact OE1-NH1 3.87Å; E85-R88 WeakPolarHBondContact OE2-CD 3.19Å; E85-R88 IonicContact OE2-NH1 3.43Å; E85-R88 PolarHBondContact OE2-NH1 3.33Å; E85-T89 WeakPolarHBondContact O-CB 3.44Å; E85-T89 PolarHBondContact O-N 2.94Å; E85-T89 PolarHBondContact O-OG1 3.42Å
86Q98.5Very high96.5Very high87 Ų87102 Ų10241%0.40749%0.494SS..Hα-helixtrans-60-45.9172.4-72.9-176.131.100111.8T82 L83 R88 T89 K90T82-Q86 WeakPolarHBondContact O-CG 3.5Å; T82-Q86 PolarHBondContact O-N 2.88Å; L83-Q86 PolarHBondContact O-N 3.28Å; Q86-R88 VanDerWaalsContact C-N 3.33Å; Q86-R88 PolarHBondContact O-N 3.46Å; Q86-T89 PolarHBondContact O-N 2.97Å; Q86-K90 WeakPolarHBondContact O-CB 3.32Å; Q86-K90 VanDerWaalsContact O-CG 3.3Å; Q86-K90 WeakPolarHBondContact O-CG 3.32Å; Q86-K90 PolarHBondContact O-N 3.28Å
87V98.3Very high96.2Very high86 Ų86104.2 Ų104.252%0.52150%0.5SS..Hα-helixtrans-61-44.1176.91690000110.7L83 R84 E85 K90 N91L83-V87 WeakPolarHBondContact O-CG2 3.43Å; L83-V87 PolarHBondContact O-N 3.01Å; R84-V87 PolarHBondContact O-N 3.27Å; E85-V87 PolarHBondContact O-N 2.81Å; V87-K90 PolarHBondContact O-N 3.36Å; V87-N91 WeakPolarHBondContact CG1-ND2 3.39Å; V87-N91 WeakPolarHBondContact O-CB 3.4Å; V87-N91 PolarHBondContact O-N 2.95Å; V87-N91 PolarHBondContact O-ND2 3.23Å
88R98.3Very high95.6Very high145 Ų145104.7 Ų104.755%0.54750%0.5SS..Hα-helixtrans-57.9-51176.1-175.3-171.5-176.3-171.11111.4R84 E85 Q86 N91 Q92R84-R88 PolarHBondContact O-N 2.86Å; E85-R88 WeakPolarHBondContact O-CB 3.43Å; E85-R88 PolarHBondContact O-N 3.25Å; E85-R88 IonicContact OE1-NH1 3.87Å; E85-R88 WeakPolarHBondContact OE2-CD 3.19Å; E85-R88 IonicContact OE2-NH1 3.43Å; E85-R88 PolarHBondContact OE2-NH1 3.33Å; Q86-R88 VanDerWaalsContact C-N 3.33Å; Q86-R88 PolarHBondContact O-N 3.46Å; R88-N91 PolarHBondContact O-N 3.43Å; R88-Q92 WeakPolarHBondContact O-CG 3.4Å; R88-Q92 PolarHBondContact O-N 2.95Å
89T97.6Very high94.8Very high70 Ų70102.7 Ų102.743%0.42950%0.501SS..Hα-helixtrans-62.2-46.7-178.9-60.50000111.5E85 Q86 N91 Q92 L93E85-T89 WeakPolarHBondContact O-CB 3.44Å; E85-T89 PolarHBondContact O-N 2.94Å; E85-T89 PolarHBondContact O-OG1 3.42Å; Q86-T89 PolarHBondContact O-N 2.97Å; T89-N91 VanDerWaalsContact C-N 3.33Å; T89-N91 PolarHBondContact O-N 3.34Å; T89-Q92 PolarHBondContact O-N 3.31Å; T89-L93 PolarHBondContact O-N 3.3Å
90K97.3Very high93.8Very high131 Ų131101.7 Ų101.757%0.5750%0.499SS*.Hα-helixtrans-60.3-42.4176.9-75.2175.7176.8173.60111.7Q86 V87 L93 L94Q86-K90 WeakPolarHBondContact O-CB 3.32Å; Q86-K90 VanDerWaalsContact O-CG 3.3Å; Q86-K90 WeakPolarHBondContact O-CG 3.32Å; Q86-K90 PolarHBondContact O-N 3.28Å; V87-K90 PolarHBondContact O-N 3.36Å; K90-L93 PolarHBondContact O-N 2.95Å; K90-L94 WeakPolarHBondContact O-CG 3.3Å; K90-L94 PolarHBondContact O-N 2.94Å
91N96.4Very high92Very high84 Ų84102.1 Ų102.145%0.44951%0.508SS..Hα-helixtrans-64.4-43.1175.9-80.6-43.6000112.3V87 R88 T89 L93 L94 Q95V87-N91 WeakPolarHBondContact CG1-ND2 3.39Å; V87-N91 WeakPolarHBondContact O-CB 3.4Å; V87-N91 PolarHBondContact O-N 2.95Å; V87-N91 PolarHBondContact O-ND2 3.23Å; R88-N91 PolarHBondContact O-N 3.43Å; T89-N91 VanDerWaalsContact C-N 3.33Å; T89-N91 PolarHBondContact O-N 3.34Å; N91-L93 VanDerWaalsContact C-N 3.3Å; N91-L93 PolarHBondContact O-N 2.97Å; N91-L94 PolarHBondContact O-N 2.95Å; N91-Q95 WeakPolarHBondContact O-CG 3.41Å; N91-Q95 PolarHBondContact O-N 2.88Å
92Q95.9Very high90.1Very high93 Ų93107.2 Ų107.244%0.43552%0.524SS..Hα-helixtrans-59.6-43175.3-73.6176.5-5.600111.6R88 T89 Q95 K96R88-Q92 WeakPolarHBondContact O-CG 3.4Å; R88-Q92 PolarHBondContact O-N 2.95Å; T89-Q92 PolarHBondContact O-N 3.31Å; Q92-Q95 PolarHBondContact O-N 3.36Å; Q92-K96 WeakPolarHBondContact O-CG 3.36Å; Q92-K96 PolarHBondContact O-N 3.42Å
93L94.9Very high88Confident89 Ų89112 Ų11247%0.46654%0.541SS..Hα-helixtrans-62.2-47177.5-174.961.7000111.4T89 K90 N91 Q95 K96 Y97T89-L93 PolarHBondContact O-N 3.3Å; K90-L93 PolarHBondContact O-N 2.95Å; N91-L93 VanDerWaalsContact C-N 3.3Å; N91-L93 PolarHBondContact O-N 2.97Å; L93-Q95 VanDerWaalsContact C-N 3.29Å; L93-Q95 PolarHBondContact O-N 3.48Å; L93-K96 WeakPolarHBondContact O-CB 3.48Å; L93-K96 PolarHBondContact O-N 3.45Å; L93-Y97 HydrophobicContact CD1-CD2 3.94Å; L93-Y97 HydrophobicContact CD1-CE2 3.41Å; L93-Y97 VanDerWaalsContact CD1-CE2 3.41Å; L93-Y97 HydrophobicContact CD2-CE2 4.06Å; L93-Y97 HydrophobicContact CG-CD2 3.82Å; L93-Y97 HydrophobicContact CG-CE2 3.51Å; L93-Y97 WeakPolarHBondContact O-CD2 3.44Å; L93-Y97 PolarHBondContact O-N 2.79Å
94L93.1Very high86.1Confident97 Ų97113.9 Ų113.951%0.50855%0.551SS.*Hα-helixtrans-58.4-40.6175.1-73.6172.9000112.2K90 N91 Y97 K98K90-L94 WeakPolarHBondContact O-CG 3.3Å; K90-L94 PolarHBondContact O-N 2.94Å; N91-L94 PolarHBondContact O-N 2.95Å; L94-Y97 PolarHBondContact O-N 3.5Å; L94-K98 VanDerWaalsContact O-CG 3.32Å; L94-K98 WeakPolarHBondContact O-CG 3.48Å; L94-K98 PolarHBondContact O-N 2.89Å
95Q91.1Very high84.1Confident116 Ų116111.7 Ų111.754%0.54256%0.556SS.*Hα-helixtrans-65-42.5176.3-69.3-61.3-26.200111.9N91 Q92 L93 Y97 K98 S99N91-Q95 WeakPolarHBondContact O-CG 3.41Å; N91-Q95 PolarHBondContact O-N 2.88Å; Q92-Q95 PolarHBondContact O-N 3.36Å; L93-Q95 VanDerWaalsContact C-N 3.29Å; L93-Q95 PolarHBondContact O-N 3.48Å; Q95-Y97 PolarHBondContact O-N 3.33Å; Q95-K98 PolarHBondContact O-N 3Å; Q95-S99 PolarHBondContact O-N 2.98Å; Q95-S99 PolarHBondContact O-OG 2.95Å
96K89.6Confident82.2Confident132 Ų132112.9 Ų112.957%0.57457%0.571SS**Hα-helixtrans-58.2-47.4174.6-72.4177.5179.4-176.60111.2Q92 L93 K98 S99 L100Q92-K96 WeakPolarHBondContact O-CG 3.36Å; Q92-K96 PolarHBondContact O-N 3.42Å; L93-K96 WeakPolarHBondContact O-CB 3.48Å; L93-K96 PolarHBondContact O-N 3.45Å; K96-K98 PolarHBondContact O-N 3.32Å; K96-S99 WeakPolarHBondContact CA-OG 3.21Å; K96-S99 PolarHBondContact O-N 3.46Å; K96-S99 PolarHBondContact O-OG 3.1Å; K96-L100 WeakPolarHBondContact O-CD1 3.32Å; K96-L100 PolarHBondContact O-N 2.72Å; K96-L100 VanDerWaalsContact O-N 3.1Å
97Y89.3Confident80.2Confident132 Ų132118.1 Ų118.152%0.51859%0.593SS.*Hα-helixtrans-62.8-39.7177.1-78.7-65.8000113.1L93 L94 Q95 S99 L100L93-Y97 HydrophobicContact CD1-CD2 3.94Å; L93-Y97 HydrophobicContact CD1-CE2 3.41Å; L93-Y97 VanDerWaalsContact CD1-CE2 3.41Å; L93-Y97 HydrophobicContact CD2-CE2 4.06Å; L93-Y97 HydrophobicContact CG-CD2 3.82Å; L93-Y97 HydrophobicContact CG-CE2 3.51Å; L93-Y97 WeakPolarHBondContact O-CD2 3.44Å; L93-Y97 PolarHBondContact O-N 2.79Å; L94-Y97 PolarHBondContact O-N 3.5Å; Q95-Y97 PolarHBondContact O-N 3.33Å; Y97-S99 VanDerWaalsContact C-N 3.32Å; Y97-S99 PolarHBondContact O-N 3.28Å; Y97-L100 PolarHBondContact O-N 3.46Å
98K84.8Confident78.1Confident154 Ų154119 Ų11967%0.6761%0.608SS**Hα-helixtrans-61.8-39.7173.9-74.8175.4-179.1-1780112.4L94 Q95 K96 L100L94-K98 VanDerWaalsContact O-CG 3.32Å; L94-K98 WeakPolarHBondContact O-CG 3.48Å; L94-K98 PolarHBondContact O-N 2.89Å; Q95-K98 PolarHBondContact O-N 3Å; K96-K98 PolarHBondContact O-N 3.32Å; K98-L100 VanDerWaalsContact C-N 3.28Å; K98-L100 PolarHBondContact O-N 3.2Å
99S81.2Confident75.6Confident92 Ų92121.2 Ų121.264%0.64365%0.647SS**Hα-helixtrans-73.8-18.2179.465.90000113.9Q95 K96 Y97 C101Q95-S99 PolarHBondContact O-N 2.98Å; Q95-S99 PolarHBondContact O-OG 2.95Å; K96-S99 WeakPolarHBondContact CA-OG 3.21Å; K96-S99 PolarHBondContact O-N 3.46Å; K96-S99 PolarHBondContact O-OG 3.1Å; Y97-S99 VanDerWaalsContact C-N 3.32Å; Y97-S99 PolarHBondContact O-N 3.28Å; S99-C101 VanDerWaalsContact C-N 3.3Å; S99-C101 PolarHBondContact O-N 3.45Å
100L76.3Confident74.5Confident98 Ų98123.8 Ų123.851%0.51366%0.658SS.*THydrogen-bonded Turntrans-80.3-0.1-170.7-117.897.3000114.8K96 Y97 K98 M102K96-L100 WeakPolarHBondContact O-CD1 3.32Å; K96-L100 PolarHBondContact O-N 2.72Å; K96-L100 VanDerWaalsContact O-N 3.1Å; Y97-L100 PolarHBondContact O-N 3.46Å; K98-L100 VanDerWaalsContact C-N 3.28Å; K98-L100 PolarHBondContact O-N 3.2Å; L100-M102 HydrophobicContact CD2-SD 4.14Å; L100-M102 PolarHBondContact O-N 3.18Å
101C59Low73.3Confident85 Ų85123.4 Ų123.457%0.57466%0.662SS**  trans57.2-11.2174.5171.20000116.9S99 F103 D104S99-C101 VanDerWaalsContact C-N 3.3Å; S99-C101 PolarHBondContact O-N 3.45Å; C101-F103 PolarHBondContact O-N 2.97Å; C101-D104 PolarHBondContact O-N 2.9Å; C101-D104 VanDerWaalsContact O-N 3.1Å; C101-D104 PolarHBondContact SG-OD2 2.95Å
102M56.7Low72Confident160 Ų160125.6 Ų125.679%0.78867%0.674SS**THydrogen-bonded Turntrans-64.1-0.4177.9-63-176.469.400114.8L100L100-M102 HydrophobicContact CD2-SD 4.14Å; L100-M102 PolarHBondContact O-N 3.18Å
103F55.1Low70.6Confident158 Ų158127.5 Ų127.569%0.69369%0.688SS**THydrogen-bonded Turntrans-116.310.8178.1-76.4-78.2000114.1C101 V105C101-F103 PolarHBondContact O-N 2.97Å; F103-V105 PolarHBondContact O-N 3.03Å
104D57.1Low69.1Low126 Ų126129.9 Ų129.967%0.67470%0.702SS**  trans-6786.9162-77.7-50.3000108C101 P106C101-D104 PolarHBondContact O-N 2.9Å; C101-D104 VanDerWaalsContact O-N 3.1Å; C101-D104 PolarHBondContact SG-OD2 2.95Å; D104-P106 WeakPolarHBondContact O-CD 3.39Å; D104-P106 VanDerWaalsContact O-N 3.16Å
105V58Low67.5Low121 Ų121132.1 Ų132.173%0.73372%0.715SS**  trans-53.9121166.3-178.50000105.4F103 K107F103-V105 PolarHBondContact O-N 3.03Å; V105-K107 PolarHBondContact O-N 3.1Å
106P56.7Low65.8Low114 Ų114133.3 Ų133.374%0.7473%0.727SS**  trans-52.8118.5176-21.730.6000107.2D104 A108D104-P106 WeakPolarHBondContact O-CD 3.39Å; D104-P106 VanDerWaalsContact O-N 3.16Å; P106-A108 PolarHBondContact O-N 2.72Å
107K57.1Low63.9Low198 Ų198133.4 Ų133.486%0.86174%0.739SS**  trans-56.9110.5169.7-89.4-177.4176.1174.70105.8V105 S109V105-K107 PolarHBondContact O-N 3.1Å; K107-S109 PolarHBondContact O-N 2.85Å
108A55.7Low61.8Low103 Ų103133.5 Ų133.585%0.85176%0.758SS**  trans-52.4116174.600000107.7P106P106-A108 PolarHBondContact O-N 2.72Å
109S44.3Very low59.7Low193 Ų193131.6 Ų131.6100%1.3577%0.766SS**  trans-75.40165.1-66.60000109.8K107K107-S109 PolarHBondContact O-N 2.85Å

Retrieved 109 of 109 residues in 32.7 ms (Link to these results)