A0A087XW41_POEFO Loading...

Nuclear protein 1b

AlphaFold DB , UniProt , Accession A0A087XW41, Species POEFO (Poecilia formosa, Amazon molly), Gene n/a, Length 75 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1T42.3Very low54Low190 Ų190130.8 Ų130.8100%1.16669%0.685SS**  095.1038.50000107.3S3T1-S3 PolarHBondContact O-N 2.9Å
2M45.7Very low55.4Low166 Ų166124.3 Ų124.382%0.81865%0.651SS**  trans-69.3121.7176.6-76.6-63.4172.700108
3S49.3Very low56.9Low90 Ų90119 Ų11963%0.62963%0.63SS**  trans-78.2120.7-172.150.80000109.7T1 V5T1-S3 PolarHBondContact O-N 2.9Å; S3-V5 WeakPolarHBondContact O-CG2 3.39Å; S3-V5 PolarHBondContact O-N 2.99Å
4H51.4Low58.3Low132 Ų132122.7 Ų122.761%0.61164%0.638SS**  trans-53.8108.9175.3-174.162.7000111.2
5V54.4Low59.9Low62 Ų62122.3 Ų122.338%0.37663%0.63SS.*  trans-90114.9175.6-175.20000109.6S3S3-V5 WeakPolarHBondContact O-CG2 3.39Å; S3-V5 PolarHBondContact O-N 2.99Å
6D53.3Low61Low102 Ų102117.1 Ų117.155%0.54560%0.602SS.*  trans-62.8134.7173.3-102.1-38.8000111.3K8 N9D6-K8 PolarHBondContact O-N 3.34Å; D6-N9 PolarHBondContact O-N 2.96Å
7V53.5Low62Low99 Ų99117.7 Ų117.760%0.660%0.602SS**G310 helixtrans-51.6-27.7-175-176.60000113.6N9 T29V7-N9 VanDerWaalsContact C-N 3.26Å; V7-N9 PolarHBondContact O-N 3.13Å; V7-T29 HydrophobicContact CB-CG2 4.35Å; V7-T29 HydrophobicContact CG1-CG2 3.97Å; V7-T29 HydrophobicContact CG2-CG2 3.78Å
8K56Low63.2Low204 Ų204119.4 Ų119.489%0.88761%0.607SS**G310 helixtrans-73.2-16179.6-65.6-178.6179.71790113.9D6D6-K8 PolarHBondContact O-N 3.34Å
9N56.7Low64.2Low123 Ų123118.8 Ų118.866%0.65860%0.601SS**G310 helixtrans-112.34.5-174.6-66.1-28000113.4D6 V7 K11D6-N9 PolarHBondContact O-N 2.96Å; V7-N9 VanDerWaalsContact C-N 3.26Å; V7-N9 PolarHBondContact O-N 3.13Å; N9-K11 PolarHBondContact O-N 3.29Å; N9-K11 VanDerWaalsContact O-N 3.15Å
10L64.5Low65.1Low71 Ų71116.9 Ų116.937%0.37259%0.587SS.*  trans-76.4102.5176.7-170.268.1000109.3L12 L28L10-L12 PolarHBondContact O-N 3.05Å; L10-L28 HydrophobicContact CD2-CB 4.08Å
11K66.9Low65.7Low200 Ų200115.2 Ų115.287%0.8758%0.579SS**  trans-76.2105.2170-72.2-171.4176.7-175.90108.6N9N9-K11 PolarHBondContact O-N 3.29Å; N9-K11 VanDerWaalsContact O-N 3.15Å
12L70.9Confident67Low53 Ų53113.1 Ų113.128%0.27756%0.557SS.*  trans-63.9142.4171.1-72137.9000109.4L10 E16 E17 R25 L28L10-L12 PolarHBondContact O-N 3.05Å; L12-E16 HydrophobicContact CB-CB 4.4Å; L12-E16 HydrophobicContact CD2-CB 3.74Å; L12-E17 HydrophobicContact CB-CG 3.98Å; L12-R25 HydrophobicContact CD2-CG 4.07Å; L12-L28 HydrophobicContact CD2-CD1 3.73Å
13S75.4Confident68Low55 Ų55112.6 Ų112.639%0.38555%0.547SS..  trans-72.6155.9169.767.70000110.3F15 E16 E17S13-F15 PolarHBondContact O-N 2.77Å; S13-F15 VanDerWaalsContact O-N 3.09Å; S13-E16 WeakPolarHBondContact CB-OE2 3.37Å; S13-E16 PolarHBondContact N-OE2 2.71Å; S13-E16 PolarHBondContact O-N 3.25Å; S13-E16 VanDerWaalsContact OG-CD 3.31Å; S13-E16 VanDerWaalsContact OG-CG 3.31Å; S13-E16 WeakPolarHBondContact OG-CG 3.4Å; S13-E16 PolarHBondContact OG-N 3.06Å; S13-E16 PolarHBondContact OG-OE2 3.13Å; S13-E17 PolarHBondContact O-N 3.02Å
14K76.4Confident69.2Low171 Ų171111.5 Ų111.574%0.74353%0.534SS*.Hα-helixtrans-55.2-30.3176.3-166.2-179.4179.6-173.40112.8E18K14-E18 PolarHBondContact O-N 2.87Å
15F81.2Confident70.3Confident116 Ų116109.9 Ų109.951%0.50952%0.522SS..Hα-helixtrans-66.8-48.9175.3177.1-96.5000111.7S13 E17 E18 H19 Y20S13-F15 PolarHBondContact O-N 2.77Å; S13-F15 VanDerWaalsContact O-N 3.09Å; F15-E17 VanDerWaalsContact C-N 3.32Å; F15-E17 PolarHBondContact O-N 3.43Å; F15-E18 PolarHBondContact O-N 3.36Å; F15-H19 AromaticContact CD2-CE1 3.74Å; F15-H19 AromaticContact CD2-ND1 3.54Å; F15-H19 HydrophobicContact CE1-CB 4.45Å; F15-H19 AromaticContact CE2-CD2 3.99Å; F15-H19 AromaticContact CE2-CE1 3.82Å; F15-H19 AromaticContact CE2-CG 3.81Å; F15-H19 AromaticContact CE2-ND1 3.68Å; F15-H19 AromaticContact CE2-NE2 3.98Å; F15-H19 HydrophobicContact CZ-CB 4.29Å; F15-H19 WeakPolarHBondContact O-CB 3.49Å; F15-H19 PolarHBondContact O-N 2.97Å; F15-H19 PolarHBondContact O-ND1 3.48Å; F15-Y20 HydrophobicContact CE1-CE1 4.17Å
16E77.9Confident70.9Confident40 Ų40110.7 Ų110.719%0.18752%0.519CS..Hα-helixtrans-65.1-36.7179.8-65.7162.5138.600111.3L12 S13 E18 Y20 L28L12-E16 HydrophobicContact CB-CB 4.4Å; L12-E16 HydrophobicContact CD2-CB 3.74Å; S13-E16 WeakPolarHBondContact CB-OE2 3.37Å; S13-E16 PolarHBondContact N-OE2 2.71Å; S13-E16 PolarHBondContact O-N 3.25Å; S13-E16 VanDerWaalsContact OG-CD 3.31Å; S13-E16 VanDerWaalsContact OG-CG 3.31Å; S13-E16 WeakPolarHBondContact OG-CG 3.4Å; S13-E16 PolarHBondContact OG-N 3.06Å; S13-E16 PolarHBondContact OG-OE2 3.13Å; E16-E18 VanDerWaalsContact C-N 3.28Å; E16-E18 PolarHBondContact O-N 3.25Å; E16-Y20 HydrophobicContact CB-CD2 3.96Å; E16-Y20 HydrophobicContact CB-CE2 4.32Å; E16-Y20 HydrophobicContact CB-CG 4.36Å; E16-Y20 HydrophobicContact CG-CD2 3.91Å; E16-Y20 HydrophobicContact CG-CE2 3.75Å; E16-Y20 WeakPolarHBondContact O-CB 3.49Å; E16-Y20 PolarHBondContact O-N 2.97Å; E16-L28 HydrophobicContact CG-CD1 4.28Å; E16-L28 WeakPolarHBondContact OE1-CD1 3.47Å
17E78.4Confident71.5Confident127 Ų127109 Ų10959%0.59351%0.51SS*.Hα-helixtrans-62.4-34175.7-71-177.7171.100113.4L12 S13 F15L12-E17 HydrophobicContact CB-CG 3.98Å; S13-E17 PolarHBondContact O-N 3.02Å; F15-E17 VanDerWaalsContact C-N 3.32Å; F15-E17 PolarHBondContact O-N 3.43Å
18E83.8Confident72.1Confident149 Ų149106.9 Ų106.970%0.69650%0.495SS*.Hα-helixtrans-90.3-29.1-175.1-173.4170.8-160.500113K14 F15 E16K14-E18 PolarHBondContact O-N 2.87Å; F15-E18 PolarHBondContact O-N 3.36Å; E16-E18 VanDerWaalsContact C-N 3.28Å; E16-E18 PolarHBondContact O-N 3.25Å
19H82.1Confident72.6Confident107 Ų10797.7 Ų97.750%0.49546%0.456SS..Hα-helixtrans-110.6-19.8-171-61.475.8000114.1F15F15-H19 AromaticContact CD2-CE1 3.74Å; F15-H19 AromaticContact CD2-ND1 3.54Å; F15-H19 HydrophobicContact CE1-CB 4.45Å; F15-H19 AromaticContact CE2-CD2 3.99Å; F15-H19 AromaticContact CE2-CE1 3.82Å; F15-H19 AromaticContact CE2-CG 3.81Å; F15-H19 AromaticContact CE2-ND1 3.68Å; F15-H19 AromaticContact CE2-NE2 3.98Å; F15-H19 HydrophobicContact CZ-CB 4.29Å; F15-H19 WeakPolarHBondContact O-CB 3.49Å; F15-H19 PolarHBondContact O-N 2.97Å; F15-H19 PolarHBondContact O-ND1 3.48Å
20Y81.1Confident72.6Confident81 Ų8194.1 Ų94.132%0.31844%0.437SS..  trans-101132.8-175.2-70.74.4000111.3F15 E16 D24 L28F15-Y20 HydrophobicContact CE1-CE1 4.17Å; E16-Y20 HydrophobicContact CB-CD2 3.96Å; E16-Y20 HydrophobicContact CB-CE2 4.32Å; E16-Y20 HydrophobicContact CB-CG 4.36Å; E16-Y20 HydrophobicContact CG-CD2 3.91Å; E16-Y20 HydrophobicContact CG-CE2 3.75Å; E16-Y20 WeakPolarHBondContact O-CB 3.49Å; E16-Y20 PolarHBondContact O-N 2.97Å; Y20-D24 HydrophobicContact CD1-CB 4.35Å; Y20-D24 HydrophobicContact CD2-CB 3.95Å; Y20-D24 HydrophobicContact CG-CB 3.72Å; Y20-L28 HydrophobicContact CD2-CD1 3.7Å; Y20-L28 HydrophobicContact CD2-CG 4.44Å; Y20-L28 HydrophobicContact CE2-CD1 3.81Å; Y20-L28 HydrophobicContact CE2-CD2 4.25Å; Y20-L28 HydrophobicContact CE2-CG 4.27Å
21D78.5Confident72.2Confident81 Ų8196.9 Ų96.943%0.43345%0.446SS..  trans-77.6-179.7172.476.98.3000111.4Y23 D24 R25D21-Y23 PolarHBondContact O-N 3.45Å; D21-Y23 WeakPolarHBondContact OD1-CA 3.3Å; D21-Y23 VanDerWaalsContact OD1-CB 3.32Å; D21-Y23 WeakPolarHBondContact OD1-CB 3.31Å; D21-Y23 PolarHBondContact OD1-N 3.08Å; D21-D24 PolarHBondContact N-OD2 3.35Å; D21-D24 PolarHBondContact O-N 3.21Å; D21-D24 PolarHBondContact OD1-N 3.22Å; D21-R25 VanDerWaalsContact O-CG 3.3Å; D21-R25 WeakPolarHBondContact O-CG 3.43Å; D21-R25 PolarHBondContact O-N 2.98Å; D21-R25 VanDerWaalsContact O-N 3.17Å
22E68.7Low71.5Confident147 Ų14789.8 Ų89.869%0.68741%0.414SS*.Hα-helixtrans-61-29178.7-168.6175.6-174.800113.6Y26E22-Y26 PolarHBondContact O-N 2.86Å
23Y67.6Low70.8Confident155 Ų15590.1 Ų90.161%0.60843%0.425SS*.Hα-helixtrans-77.6-40.9179.7-67-81.1000112D21 R25 Y26 N27D21-Y23 PolarHBondContact O-N 3.45Å; D21-Y23 WeakPolarHBondContact OD1-CA 3.3Å; D21-Y23 VanDerWaalsContact OD1-CB 3.32Å; D21-Y23 WeakPolarHBondContact OD1-CB 3.31Å; D21-Y23 PolarHBondContact OD1-N 3.08Å; Y23-R25 VanDerWaalsContact C-N 3.33Å; Y23-R25 PolarHBondContact O-N 3.08Å; Y23-Y26 WeakPolarHBondContact O-CB 3.38Å; Y23-Y26 PolarHBondContact O-N 3.09Å; Y23-N27 PolarHBondContact O-N 2.99Å; Y23-N27 PolarHBondContact O-ND2 3.02Å
24D75.1Confident69.9Low67 Ų6793.1 Ų93.136%0.35843%0.433SS..Hα-helixtrans-60.7-44175.4-71.1-32.1000110.9Y20 D21 Y26 N27 L28Y20-D24 HydrophobicContact CD1-CB 4.35Å; Y20-D24 HydrophobicContact CD2-CB 3.95Å; Y20-D24 HydrophobicContact CG-CB 3.72Å; D21-D24 PolarHBondContact N-OD2 3.35Å; D21-D24 PolarHBondContact O-N 3.21Å; D21-D24 PolarHBondContact OD1-N 3.22Å; D24-Y26 VanDerWaalsContact C-N 3.29Å; D24-Y26 PolarHBondContact O-N 3Å; D24-N27 PolarHBondContact O-N 3.4Å; D24-N27 VanDerWaalsContact O-N 3.16Å; D24-L28 PolarHBondContact O-N 3.03Å
25R74Confident68.8Low97 Ų9786.8 Ų86.837%0.36642%0.416SS..Hα-helixtrans-62.4-34.2176.9-65.8-178.8-50.6-137.47.1113.3L12 D21 Y23 N27 L28L12-R25 HydrophobicContact CD2-CG 4.07Å; D21-R25 VanDerWaalsContact O-CG 3.3Å; D21-R25 WeakPolarHBondContact O-CG 3.43Å; D21-R25 PolarHBondContact O-N 2.98Å; D21-R25 VanDerWaalsContact O-N 3.17Å; Y23-R25 VanDerWaalsContact C-N 3.33Å; Y23-R25 PolarHBondContact O-N 3.08Å; R25-N27 VanDerWaalsContact C-N 3.26Å; R25-N27 PolarHBondContact O-N 3.44Å; R25-L28 PolarHBondContact O-N 3.48Å
26Y66.6Low67.4Low79 Ų7986 Ų8631%0.3143%0.425SS..Hα-helixtrans-65.1-33.6178.3-175.9-86.1000111.9E22 Y23 D24 T29 Y32 K44E22-Y26 PolarHBondContact O-N 2.86Å; Y23-Y26 WeakPolarHBondContact O-CB 3.38Å; Y23-Y26 PolarHBondContact O-N 3.09Å; D24-Y26 VanDerWaalsContact C-N 3.29Å; D24-Y26 PolarHBondContact O-N 3Å; Y26-T29 PolarHBondContact O-OG1 3.19Å; Y26-Y32 HydrophobicContact CD1-CD2 4.5Å; Y26-Y32 HydrophobicContact CE1-CD1 4.38Å; Y26-Y32 AromaticContact CE1-CD2 3.79Å; Y26-Y32 HydrophobicContact CE1-CD2 3.79Å; Y26-Y32 HydrophobicContact CE1-CE1 4.47Å; Y26-Y32 AromaticContact CE1-CE2 3.89Å; Y26-Y32 HydrophobicContact CE1-CE2 3.89Å; Y26-Y32 HydrophobicContact CE1-CG 4.09Å; Y26-Y32 HydrophobicContact CE2-CE2 4.49Å; Y26-Y32 AromaticContact CZ-CE2 3.67Å; Y26-Y32 AromaticContact CZ-CZ 3.98Å; Y26-Y32 WeakPolarHBondContact OH-CE2 3.45Å; Y26-Y32 VanDerWaalsContact OH-CZ 3.22Å; Y26-Y32 PolarHBondContact OH-OH 3.32Å; Y26-K44 HydrophobicContact CD1-CD 3.66Å; Y26-K44 HydrophobicContact CD1-CG 4.29Å; Y26-K44 HydrophobicContact CE1-CB 3.8Å; Y26-K44 HydrophobicContact CE1-CD 3.34Å; Y26-K44 HydrophobicContact CE1-CG 3.5Å
27N66.2Low66.2Low66 Ų6685 Ų8535%0.35342%0.423SS..Hα-helixtrans-77.6-19.1-178.7-64.5-32000113.6Y23 D24 R25 T29Y23-N27 PolarHBondContact O-N 2.99Å; Y23-N27 PolarHBondContact O-ND2 3.02Å; D24-N27 PolarHBondContact O-N 3.4Å; D24-N27 VanDerWaalsContact O-N 3.16Å; R25-N27 VanDerWaalsContact C-N 3.26Å; R25-N27 PolarHBondContact O-N 3.44Å; N27-T29 PolarHBondContact O-N 3.45Å
28L67.1Low65.6Low56 Ų5689.7 Ų89.729%0.29344%0.435SS..THydrogen-bonded Turntrans-72.9-7.2177-73.7172000114L10 L12 E16 Y20 D24 R25L10-L28 HydrophobicContact CD2-CB 4.08Å; L12-L28 HydrophobicContact CD2-CD1 3.73Å; E16-L28 HydrophobicContact CG-CD1 4.28Å; E16-L28 WeakPolarHBondContact OE1-CD1 3.47Å; Y20-L28 HydrophobicContact CD2-CD1 3.7Å; Y20-L28 HydrophobicContact CD2-CG 4.44Å; Y20-L28 HydrophobicContact CE2-CD1 3.81Å; Y20-L28 HydrophobicContact CE2-CD2 4.25Å; Y20-L28 HydrophobicContact CE2-CG 4.27Å; D24-L28 PolarHBondContact O-N 3.03Å; R25-L28 PolarHBondContact O-N 3.48Å
29T64.9Low64.7Low11 Ų1191.7 Ų91.77%0.06744%0.442CS..SBendtrans-80.9134.3179.861.50000111V7 Y26 N27 K31 Y32 A33V7-T29 HydrophobicContact CB-CG2 4.35Å; V7-T29 HydrophobicContact CG1-CG2 3.97Å; V7-T29 HydrophobicContact CG2-CG2 3.78Å; Y26-T29 PolarHBondContact O-OG1 3.19Å; N27-T29 PolarHBondContact O-N 3.45Å; T29-K31 PolarHBondContact O-N 3.4Å; T29-Y32 PolarHBondContact O-N 3.49Å; T29-Y32 WeakPolarHBondContact OG1-CD2 3.33Å; T29-A33 PolarHBondContact O-N 3.43Å
30D57Low63.8Low47 Ų4790 Ų9025%0.25145%0.453SS..Hα-helixtrans-53.3-33-173.8-127.70.4000113.2Y32 E34D30-Y32 PolarHBondContact O-N 3.31Å; D30-E34 PolarHBondContact O-N 3.07Å
31K56.5Low63.1Low130 Ų13091.1 Ų91.157%0.56546%0.457SS*.Hα-helixtrans-58.2-34.9175.9-169.9177.4-179-178.10112.8T29 K43T29-K31 PolarHBondContact O-N 3.4Å; K31-K43 WeakPolarHBondContact O-CD 3.33Å; K31-K43 PolarHBondContact O-NZ 3.06Å
32Y53.2Low62.5Low50 Ų5089.9 Ų89.920%0.19645%0.452CS..Hα-helixtrans-107.8-17.5-176.5-61.1-73.7000113.5Y26 T29 D30 K43 K44Y26-Y32 HydrophobicContact CD1-CD2 4.5Å; Y26-Y32 HydrophobicContact CE1-CD1 4.38Å; Y26-Y32 AromaticContact CE1-CD2 3.79Å; Y26-Y32 HydrophobicContact CE1-CD2 3.79Å; Y26-Y32 HydrophobicContact CE1-CE1 4.47Å; Y26-Y32 AromaticContact CE1-CE2 3.89Å; Y26-Y32 HydrophobicContact CE1-CE2 3.89Å; Y26-Y32 HydrophobicContact CE1-CG 4.09Å; Y26-Y32 HydrophobicContact CE2-CE2 4.49Å; Y26-Y32 AromaticContact CZ-CE2 3.67Å; Y26-Y32 AromaticContact CZ-CZ 3.98Å; Y26-Y32 WeakPolarHBondContact OH-CE2 3.45Å; Y26-Y32 VanDerWaalsContact OH-CZ 3.22Å; Y26-Y32 PolarHBondContact OH-OH 3.32Å; T29-Y32 PolarHBondContact O-N 3.49Å; T29-Y32 WeakPolarHBondContact OG1-CD2 3.33Å; D30-Y32 PolarHBondContact O-N 3.31Å; Y32-K43 HydrophobicContact CD1-CB 3.65Å; Y32-K43 HydrophobicContact CE1-CB 4.42Å; Y32-K44 HydrophobicContact CD1-CB 4.41Å
33A54.5Low62.4Low61 Ų6186 Ų8650%0.50443%0.433SS..Hα-helixtrans-74.6-35176.500000113.6T29 G35T29-A33 PolarHBondContact O-N 3.43Å; A33-G35 VanDerWaalsContact C-N 3.31Å; A33-G35 PolarHBondContact O-N 2.87Å
34E56.3Low62.3Low118 Ų11880.9 Ų80.955%0.55141%0.414SS*.SBendtrans-82.863.3-174.2-68.8-168.9149.300114.1D30 K43D30-E34 PolarHBondContact O-N 3.07Å; E34-K43 VanDerWaalsContact C-NZ 3.27Å; E34-K43 WeakPolarHBondContact O-CE 3.41Å; E34-K43 PolarHBondContact O-NZ 3.37Å
35G53.9Low61.7Low38 Ų3881.8 Ų81.839%0.39242%0.416SS..  trans134.1125.7158.700000114.7A33 A37 K43A33-G35 VanDerWaalsContact C-N 3.31Å; A33-G35 PolarHBondContact O-N 2.87Å; G35-A37 PolarHBondContact O-N 2.9Å; G35-K43 WeakPolarHBondContact O-CG 3.35Å
36S52.3Low61.5Low99 Ų9978.2 Ų78.269%0.69241%0.407SS*.  trans-45.7112160.4166.90000109.3R38S36-R38 PolarHBondContact O-N 2.94Å
37A52.8Low61.4Low18 Ų1877.7 Ų77.715%0.14942%0.415CS..BIsolated β-bridgetrans-63.1131.3166.500000106.5G35 K39 G40 R41 A46G35-A37 PolarHBondContact O-N 2.9Å; A37-K39 PolarHBondContact O-N 3.11Å; A37-G40 PolarHBondContact O-N 2.57Å; A37-R41 WeakPolarHBondContact CA-O 3.48Å; A37-R41 HydrophobicContact CB-CB 4.28Å; A37-R41 VanDerWaalsContact CB-O 3.24Å; A37-R41 WeakPolarHBondContact CB-O 3.45Å; A37-R41 PolarHBondContact N-O 3.25Å; A37-R41 PolarHBondContact O-N 2.8Å; A37-A46 HydrophobicContact CB-CB 3.61Å
38R66.2Low61.4Low227 Ų22777.8 Ų77.886%0.85742%0.416SS*.THydrogen-bonded Turntrans-45.8134.4-174-65.3-175.1-174175.12.1110.6S36 R41S36-R38 PolarHBondContact O-N 2.94Å; R38-R41 PolarHBondContact O-NH2 2.84Å
39K65Low61.4Low190 Ų19080.7 Ų80.783%0.82643%0.431SS*.THydrogen-bonded Turntrans79.841.5-173.5-156.2170.2179.7176.80114.3A37 R41A37-K39 PolarHBondContact O-N 3.11Å; K39-R41 PolarHBondContact O-N 2.97Å; K39-R41 VanDerWaalsContact O-N 3.15Å
40G63.1Low61.3Low71 Ų7184.1 Ų84.173%0.73245%0.452SS*.THydrogen-bonded Turntrans64.720.8168.700000115.1A37A37-G40 PolarHBondContact O-N 2.57Å
41R64.8Low61.5Low105 Ų10588.1 Ų88.140%0.39647%0.474SS..BIsolated β-bridgetrans-98.6149.3-179.3-75.4176.7-68.3166.62.6110.2A37 R38 K39 E45A37-R41 WeakPolarHBondContact CA-O 3.48Å; A37-R41 HydrophobicContact CB-CB 4.28Å; A37-R41 VanDerWaalsContact CB-O 3.24Å; A37-R41 WeakPolarHBondContact CB-O 3.45Å; A37-R41 PolarHBondContact N-O 3.25Å; A37-R41 PolarHBondContact O-N 2.8Å; R38-R41 PolarHBondContact O-NH2 2.84Å; K39-R41 PolarHBondContact O-N 2.97Å; K39-R41 VanDerWaalsContact O-N 3.15Å; R41-E45 WeakPolarHBondContact CA-OE2 3.45Å; R41-E45 HydrophobicContact CB-CB 4.15Å; R41-E45 WeakPolarHBondContact CB-OE2 3.21Å; R41-E45 HydrophobicContact CG-CB 4.47Å
42T66.4Low61.9Low55 Ų5590.6 Ų90.634%0.33748%0.48SS..  trans-69.1154.4167.370.30000109.7K44 E45 A46T42-K44 PolarHBondContact O-N 2.97Å; T42-E45 PolarHBondContact N-OE2 3.16Å; T42-E45 PolarHBondContact O-N 2.82Å; T42-E45 VanDerWaalsContact O-N 3.16Å; T42-E45 VanDerWaalsContact OG1-CG 3.27Å; T42-E45 WeakPolarHBondContact OG1-CG 3.37Å; T42-E45 PolarHBondContact OG1-N 3.12Å; T42-E45 VanDerWaalsContact OG1-N 3.12Å; T42-A46 PolarHBondContact O-N 3.28Å
43K66.4Low62.4Low66 Ų6697.4 Ų97.429%0.28751%0.513SS..Hα-helixtrans-58.9-28.5174.4-79-179.9-179.3177.90112.4K31 Y32 E34 G35 S47K31-K43 WeakPolarHBondContact O-CD 3.33Å; K31-K43 PolarHBondContact O-NZ 3.06Å; Y32-K43 HydrophobicContact CD1-CB 3.65Å; Y32-K43 HydrophobicContact CE1-CB 4.42Å; E34-K43 VanDerWaalsContact C-NZ 3.27Å; E34-K43 WeakPolarHBondContact O-CE 3.41Å; E34-K43 PolarHBondContact O-NZ 3.37Å; G35-K43 WeakPolarHBondContact O-CG 3.35Å; K43-S47 WeakPolarHBondContact O-CB 3.41Å; K43-S47 PolarHBondContact O-N 3.21Å
44K66.2Low62.6Low47 Ų4797.6 Ų97.620%0.20451%0.506CS..Hα-helixtrans-65.2-53.3172.3-168.4-168.9-170.3169.60111.1Y26 Y32 T42 A46 S47 D48Y26-K44 HydrophobicContact CD1-CD 3.66Å; Y26-K44 HydrophobicContact CD1-CG 4.29Å; Y26-K44 HydrophobicContact CE1-CB 3.8Å; Y26-K44 HydrophobicContact CE1-CD 3.34Å; Y26-K44 HydrophobicContact CE1-CG 3.5Å; Y32-K44 HydrophobicContact CD1-CB 4.41Å; T42-K44 PolarHBondContact O-N 2.97Å; K44-A46 PolarHBondContact O-N 2.96Å; K44-S47 CarbonylContact O-C 3.55Å; K44-S47 WeakPolarHBondContact O-CA 3.35Å; K44-S47 WeakPolarHBondContact O-CB 3.29Å; K44-S47 PolarHBondContact O-N 3.25Å; K44-D48 PolarHBondContact O-N 3.18Å
45E63.1Low63.1Low87 Ų8798.5 Ų98.541%0.40752%0.522SS..Hα-helixtrans-57.4-38.6177.2-74.1172.4155.900111.8R41 T42 N49R41-E45 WeakPolarHBondContact CA-OE2 3.45Å; R41-E45 HydrophobicContact CB-CB 4.15Å; R41-E45 WeakPolarHBondContact CB-OE2 3.21Å; R41-E45 HydrophobicContact CG-CB 4.47Å; T42-E45 PolarHBondContact N-OE2 3.16Å; T42-E45 PolarHBondContact O-N 2.82Å; T42-E45 VanDerWaalsContact O-N 3.16Å; T42-E45 VanDerWaalsContact OG1-CG 3.27Å; T42-E45 WeakPolarHBondContact OG1-CG 3.37Å; T42-E45 PolarHBondContact OG1-N 3.12Å; T42-E45 VanDerWaalsContact OG1-N 3.12Å; E45-N49 WeakPolarHBondContact O-CB 3.43Å; E45-N49 PolarHBondContact O-N 3.15Å; E45-N49 PolarHBondContact O-ND2 3.28Å
46A68.3Low63.8Low22 Ų2298.1 Ų98.118%0.18252%0.515CS..Hα-helixtrans-63.6-45.7173.400000111.5A37 T42 K44 N49 T50A37-A46 HydrophobicContact CB-CB 3.61Å; T42-A46 PolarHBondContact O-N 3.28Å; K44-A46 PolarHBondContact O-N 2.96Å; A46-N49 CarbonylContact O-C 3.58Å; A46-T50 VanDerWaalsContact O-CB 3.29Å; A46-T50 WeakPolarHBondContact O-CB 3.18Å; A46-T50 PolarHBondContact O-N 3.18Å; A46-T50 PolarHBondContact O-OG1 2.64Å
47S66.1Low64.7Low67 Ų6794.4 Ų94.447%0.46949%0.493SS..Hα-helixtrans-62-49.1177.5-178.90000112.3K43 K44 N49 T50K43-S47 WeakPolarHBondContact O-CB 3.41Å; K43-S47 PolarHBondContact O-N 3.21Å; K44-S47 CarbonylContact O-C 3.55Å; K44-S47 WeakPolarHBondContact O-CA 3.35Å; K44-S47 WeakPolarHBondContact O-CB 3.29Å; K44-S47 PolarHBondContact O-N 3.25Å; S47-N49 VanDerWaalsContact C-N 3.28Å; S47-N49 PolarHBondContact O-N 3.36Å; S47-T50 PolarHBondContact O-N 2.88Å; S47-T50 VanDerWaalsContact O-N 3.11Å
48D66.4Low66Low69 Ų69100.2 Ų100.237%0.36952%0.516SS..Hα-helixtrans-68.4-30.2-176.3-69.6-14.5000112.2K44 R52K44-D48 PolarHBondContact O-N 3.18Å; D48-R52 VanDerWaalsContact O-CZ 3.26Å; D48-R52 PolarHBondContact O-NE 3.06Å; D48-R52 PolarHBondContact O-NH2 3.25Å
49N65.9Low66.7Low117 Ų11795.4 Ų95.463%0.62650%0.504SS*.THydrogen-bonded Turntrans-95.95.9174.7-66.1-65.7000113.6E45 A46 S47E45-N49 WeakPolarHBondContact O-CB 3.43Å; E45-N49 PolarHBondContact O-N 3.15Å; E45-N49 PolarHBondContact O-ND2 3.28Å; A46-N49 CarbonylContact O-C 3.58Å; S47-N49 VanDerWaalsContact C-N 3.28Å; S47-N49 PolarHBondContact O-N 3.36Å
50T64.1Low67.6Low82 Ų8293 Ų9350%0.50349%0.489SS..SBendtrans-83.6129173.9-71.10000109.9A46 S47 R52A46-T50 VanDerWaalsContact O-CB 3.29Å; A46-T50 WeakPolarHBondContact O-CB 3.18Å; A46-T50 PolarHBondContact O-N 3.18Å; A46-T50 PolarHBondContact O-OG1 2.64Å; S47-T50 PolarHBondContact O-N 2.88Å; S47-T50 VanDerWaalsContact O-N 3.11Å; T50-R52 VanDerWaalsContact C-N 3.33Å; T50-R52 PolarHBondContact O-N 3.32Å
51N60.9Low68.6Low132 Ų13294.5 Ų94.571%0.70648%0.475SS*.  trans16.965.1163.3-67-45.4000115.8Q53N51-Q53 PolarHBondContact O-N 2.84Å
52R63.7Low69.7Low182 Ų18293.8 Ų93.869%0.68748%0.479SS*.  trans-63.9134.2162.9-63.2-177.9-172.5-174.7-0.7107.4D48 T50 N54D48-R52 VanDerWaalsContact O-CZ 3.26Å; D48-R52 PolarHBondContact O-NE 3.06Å; D48-R52 PolarHBondContact O-NH2 3.25Å; T50-R52 VanDerWaalsContact C-N 3.33Å; T50-R52 PolarHBondContact O-N 3.32Å; R52-N54 PolarHBondContact O-N 3.36Å
53Q63.8Low70.8Confident193 Ų19394.8 Ų94.890%0.90249%0.485SS*.  trans-6679.2171.9-69.7-69.1-5.600108.5N51N51-Q53 PolarHBondContact O-N 2.84Å
54N59.3Low71.9Confident65 Ų6597.2 Ų97.235%0.34850%0.497SS..  trans-87.8128.6168.8-178.2-43.6000106R52 A56 G57 R60R52-N54 PolarHBondContact O-N 3.36Å; N54-A56 PolarHBondContact O-N 3.25Å; N54-A56 PolarHBondContact OD1-N 3.31Å; N54-G57 WeakPolarHBondContact O-CA 3.27Å; N54-G57 PolarHBondContact O-N 3.43Å; N54-R60 VanDerWaalsContact CB-NH2 3.26Å; N54-R60 PolarHBondContact ND2-NH2 3.33Å
55P66.9Low73.1Confident136 Ų136101.2 Ų101.288%0.88351%0.514SS*.THydrogen-bonded Turntrans-55.7-20.9-179.820.1-31.2000113.6
56A67.6Low74.6Confident30 Ų30102 Ų10225%0.24852%0.521CS..THydrogen-bonded Turntrans-10918.9172.700000113.7N54 R60N54-A56 PolarHBondContact O-N 3.25Å; N54-A56 PolarHBondContact OD1-N 3.31Å; A56-R60 WeakPolarHBondContact O-CB 3.24Å; A56-R60 WeakPolarHBondContact O-CG 2.93Å; A56-R60 PolarHBondContact O-N 3.41Å; A56-R60 VanDerWaalsContact O-N 3.13Å; A56-R60 PolarHBondContact O-NE 2.94Å
57G72.8Confident75.8Confident22 Ų22105.8 Ų105.823%0.22754%0.535CS..Hα-helixtrans-67.2-37.1-179.100000112.9N54 K61N54-G57 WeakPolarHBondContact O-CA 3.27Å; N54-G57 PolarHBondContact O-N 3.43Å; G57-K61 VanDerWaalsContact O-CB 3.3Å; G57-K61 WeakPolarHBondContact O-CB 3.34Å; G57-K61 PolarHBondContact O-N 2.88Å
58H78.8Confident77Confident139 Ų139106 Ų10664%0.64453%0.53SS*.Hα-helixtrans-65.2-48.6177.7-172.865.2000111.5K61 I62H58-K61 PolarHBondContact O-N 3.02Å; H58-I62 WeakPolarHBondContact NE2-CD1 3.43Å; H58-I62 WeakPolarHBondContact O-CG1 3.34Å; H58-I62 PolarHBondContact O-N 3.49Å
59E82Confident78.3Confident127 Ų127106.2 Ų106.259%0.59354%0.538SS*.Hα-helixtrans-61-48.9179-64.8165.6177.100111.4K61 I62 V63E59-K61 VanDerWaalsContact C-N 3.3Å; E59-K61 PolarHBondContact O-N 3.39Å; E59-I62 PolarHBondContact O-N 2.95Å; E59-I62 VanDerWaalsContact O-N 3.13Å; E59-V63 WeakPolarHBondContact O-CG2 3.43Å; E59-V63 PolarHBondContact O-N 3.3Å
60R83.2Confident79.6Confident139 Ų139105.5 Ų105.553%0.52553%0.531SS..Hα-helixtrans-59.3-40.3176.3-73.4-177.8-60.3150.611.8112.6N54 A56 I62 V63 E64N54-R60 VanDerWaalsContact CB-NH2 3.26Å; N54-R60 PolarHBondContact ND2-NH2 3.33Å; A56-R60 WeakPolarHBondContact O-CB 3.24Å; A56-R60 WeakPolarHBondContact O-CG 2.93Å; A56-R60 PolarHBondContact O-N 3.41Å; A56-R60 VanDerWaalsContact O-N 3.13Å; A56-R60 PolarHBondContact O-NE 2.94Å; R60-I62 VanDerWaalsContact C-N 3.33Å; R60-I62 PolarHBondContact O-N 2.93Å; R60-V63 PolarHBondContact O-N 3.25Å; R60-E64 VanDerWaalsContact O-CB 3.31Å; R60-E64 WeakPolarHBondContact O-CB 3.2Å; R60-E64 PolarHBondContact O-N 3.17Å
61K84Confident80.9Confident102 Ų102108.3 Ų108.344%0.44354%0.536SS..Hα-helixtrans-64.8-37.4177.2-175.7175.4-174.2173.40112.2G57 H58 E59 K65G57-K61 VanDerWaalsContact O-CB 3.3Å; G57-K61 WeakPolarHBondContact O-CB 3.34Å; G57-K61 PolarHBondContact O-N 2.88Å; H58-K61 PolarHBondContact O-N 3.02Å; E59-K61 VanDerWaalsContact C-N 3.3Å; E59-K61 PolarHBondContact O-N 3.39Å; K61-K65 WeakPolarHBondContact O-CB 3.34Å; K61-K65 WeakPolarHBondContact O-CG 3.3Å; K61-K65 PolarHBondContact O-N 3.36Å; K61-K65 VanDerWaalsContact O-N 3.08Å
62I87.3Confident82.2Confident90 Ų90109.4 Ų109.446%0.46253%0.534SS..Hα-helixtrans-66.4-48.7175.2-69.7170.3000110H58 E59 R60 E64 K65 L66H58-I62 WeakPolarHBondContact NE2-CD1 3.43Å; H58-I62 WeakPolarHBondContact O-CG1 3.34Å; H58-I62 PolarHBondContact O-N 3.49Å; E59-I62 PolarHBondContact O-N 2.95Å; E59-I62 VanDerWaalsContact O-N 3.13Å; R60-I62 VanDerWaalsContact C-N 3.33Å; R60-I62 PolarHBondContact O-N 2.93Å; I62-E64 VanDerWaalsContact C-N 3.35Å; I62-E64 PolarHBondContact O-N 3.39Å; I62-K65 PolarHBondContact O-N 2.85Å; I62-L66 PolarHBondContact O-N 3.39Å
63V89.4Confident83.2Confident77 Ų77104.8 Ų104.847%0.46754%0.535SS..Hα-helixtrans-58.6-46.4178.4173.20000111.2E59 R60 K65 L66 Q67E59-V63 WeakPolarHBondContact O-CG2 3.43Å; E59-V63 PolarHBondContact O-N 3.3Å; R60-V63 PolarHBondContact O-N 3.25Å; V63-K65 PolarHBondContact O-N 2.92Å; V63-L66 PolarHBondContact O-N 3.05Å; V63-Q67 HydrophobicContact CG1-CG 4.44Å; V63-Q67 WeakPolarHBondContact O-CG 3.47Å; V63-Q67 PolarHBondContact O-N 3.38Å
64E89.8Confident83.8Confident116 Ų116104.1 Ų104.154%0.54253%0.529SS..Hα-helixtrans-63-40.9179-174.4-179.9-171.400112.1R60 I62 N68R60-E64 VanDerWaalsContact O-CB 3.31Å; R60-E64 WeakPolarHBondContact O-CB 3.2Å; R60-E64 PolarHBondContact O-N 3.17Å; I62-E64 VanDerWaalsContact C-N 3.35Å; I62-E64 PolarHBondContact O-N 3.39Å; E64-N68 WeakPolarHBondContact O-CB 3.32Å; E64-N68 VanDerWaalsContact O-CG 3.24Å; E64-N68 PolarHBondContact O-N 3.01Å; E64-N68 PolarHBondContact O-ND2 3.46Å; E64-N68 VanDerWaalsContact O-ND2 3.09Å
65K91.8Very high84.1Confident131 Ų131111.8 Ų111.857%0.5756%0.563SS**Hα-helixtrans-61.8-43.9174.2-80.9-177.9174.8-1700111.8K61 I62 V63 N68 S69K61-K65 WeakPolarHBondContact O-CB 3.34Å; K61-K65 WeakPolarHBondContact O-CG 3.3Å; K61-K65 PolarHBondContact O-N 3.36Å; K61-K65 VanDerWaalsContact O-N 3.08Å; I62-K65 PolarHBondContact O-N 2.85Å; V63-K65 PolarHBondContact O-N 2.92Å; K65-N68 PolarHBondContact O-N 3.04Å; K65-S69 WeakPolarHBondContact O-CB 3.42Å; K65-S69 PolarHBondContact O-N 2.8Å; K65-S69 PolarHBondContact O-OG 2.84Å; K65-S69 VanDerWaalsContact O-OG 3.08Å
66L94.2Very high84.9Confident105 Ų105110.6 Ų110.655%0.5555%0.547SS..Hα-helixtrans-61.4-51.2179.3-17367.3000110.8I62 V63 N68 S69 E70I62-L66 PolarHBondContact O-N 3.39Å; V63-L66 PolarHBondContact O-N 3.05Å; L66-N68 VanDerWaalsContact C-N 3.33Å; L66-N68 PolarHBondContact O-N 3.48Å; L66-S69 PolarHBondContact O-N 3.16Å; L66-E70 WeakPolarHBondContact O-CG 3.43Å; L66-E70 PolarHBondContact O-N 3.24Å
67Q93.3Very high85.9Confident100 Ų100114.8 Ų114.847%0.46756%0.563SS.*Hα-helixtrans-59.3-40.8178.5-71178.1-12.700112.8V63 E70 K71V63-Q67 HydrophobicContact CG1-CG 4.44Å; V63-Q67 WeakPolarHBondContact O-CG 3.47Å; V63-Q67 PolarHBondContact O-N 3.38Å; Q67-E70 PolarHBondContact O-N 3.31Å; Q67-K71 WeakPolarHBondContact O-CG 3.31Å; Q67-K71 PolarHBondContact O-N 3.23Å
68N93Very high86.6Confident71 Ų71119.9 Ų119.938%0.3858%0.581SS.*Hα-helixtrans-69.9-37.9178.6-74.1-31.5000112.4E64 K65 L66 K71 K72E64-N68 WeakPolarHBondContact O-CB 3.32Å; E64-N68 VanDerWaalsContact O-CG 3.24Å; E64-N68 PolarHBondContact O-N 3.01Å; E64-N68 PolarHBondContact O-ND2 3.46Å; E64-N68 VanDerWaalsContact O-ND2 3.09Å; K65-N68 PolarHBondContact O-N 3.04Å; L66-N68 VanDerWaalsContact C-N 3.33Å; L66-N68 PolarHBondContact O-N 3.48Å; N68-K71 PolarHBondContact O-N 3.35Å; N68-K72 WeakPolarHBondContact O-CG 3.43Å; N68-K72 PolarHBondContact O-N 3.38Å
69S92.4Very high87Confident75 Ų75118.8 Ų118.852%0.52458%0.578SS.*Hα-helixtrans-63.9-42.4174-66.60000111.5K65 L66 K72 A73K65-S69 WeakPolarHBondContact O-CB 3.42Å; K65-S69 PolarHBondContact O-N 2.8Å; K65-S69 PolarHBondContact O-OG 2.84Å; K65-S69 VanDerWaalsContact O-OG 3.08Å; L66-S69 PolarHBondContact O-N 3.16Å; S69-K72 PolarHBondContact O-N 2.76Å; S69-A73 WeakPolarHBondContact O-CB 3.2Å; S69-A73 PolarHBondContact O-N 3.15Å
70E93.4Very high87.4Confident102 Ų102118.3 Ų118.348%0.47758%0.577SS.*Hα-helixtrans-62.8-42.6175.3-73177.5-171.900112.6L66 Q67 A73 K74L66-E70 WeakPolarHBondContact O-CG 3.43Å; L66-E70 PolarHBondContact O-N 3.24Å; Q67-E70 PolarHBondContact O-N 3.31Å; E70-A73 PolarHBondContact O-N 2.88Å; E70-K74 WeakPolarHBondContact O-CG 3.42Å; E70-K74 PolarHBondContact O-N 2.99Å
71K92.3Very high87.6Confident140 Ų140116.9 Ų116.961%0.60958%0.58SS**Hα-helixtrans-60.9-46.1176.5-75.6174.9-177179.30111.6Q67 N68 A73 K74 E75Q67-K71 WeakPolarHBondContact O-CG 3.31Å; Q67-K71 PolarHBondContact O-N 3.23Å; N68-K71 PolarHBondContact O-N 3.35Å; K71-A73 VanDerWaalsContact C-N 3.28Å; K71-A73 PolarHBondContact O-N 3.39Å; K71-K74 PolarHBondContact O-N 3.02Å; K71-E75 PolarHBondContact O-N 3.09Å
72K86.8Confident87.9Confident156 Ų156118 Ų11868%0.67859%0.59SS**Hα-helixtrans-66.1-28.2178-73.2-178.1177.9-168.20113.8N68 S69 K74N68-K72 WeakPolarHBondContact O-CG 3.43Å; N68-K72 PolarHBondContact O-N 3.38Å; S69-K72 PolarHBondContact O-N 2.76Å; K72-K74 VanDerWaalsContact C-N 3.28Å
73A85.4Confident87.9Confident85 Ų85120.2 Ų120.270%0.70260%0.6SS**Hα-helixtrans-78-15.6177.100000113S69 E70 K71S69-A73 WeakPolarHBondContact O-CB 3.2Å; S69-A73 PolarHBondContact O-N 3.15Å; E70-A73 PolarHBondContact O-N 2.88Å; K71-A73 VanDerWaalsContact C-N 3.28Å; K71-A73 PolarHBondContact O-N 3.39Å
74K77.5Confident87.8Confident178 Ų178123.8 Ų123.877%0.77461%0.611SS**  trans-96-8.5178-70.5178.1-177.8-179.20113.5E70 K71 K72E70-K74 WeakPolarHBondContact O-CG 3.42Å; E70-K74 PolarHBondContact O-N 2.99Å; K71-K74 PolarHBondContact O-N 3.02Å; K72-K74 VanDerWaalsContact C-N 3.28Å
75E64.2Low87.6Confident226 Ų226124.5 Ų124.5100%1.05662%0.617SS**  trans-98.70179.1-160.1175.7-160.200109.7K71K71-E75 PolarHBondContact O-N 3.09Å

Retrieved 75 of 75 residues in 193.6 ms (Link to these results)