A0A087XY28_POEFO Loading...

DNA-directed RNA polymerase subunit

Core component of RNA polymerase III (Pol III) which synthesizes small non-coding RNAs using the four ribonucleoside triphosphates as substrates. Can mediate Pol I proofreading of the nascent RNA transcript. Anchors into the Pol III active site to constantly monitor transcription fidelity, cleaves mis-incorporated 5'-ribonucleotides and restarts the transcription process. Once Pol III reaches the poly(dT) termination signal, can induce Pol III clamp opening and transcription termination. Pol III plays an important role in sensing and limiting infection by intracellular bacteria and DNA viruses. Acts as a nuclear and cytosolic DNA sensor involved in innate immune response. Can sense non-self dsDNA that serves as template for transcription into dsRNA. The non-self RNA polymerase III transcripts, such as Epstein-Barr virus-encoded RNAs (EBERs) induce type I interferon and NF-kappa-B through the RIG-I pathway. DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

AlphaFold DB , UniProt , Accession A0A087XY28, Species POEFO (Poecilia formosa, Amazon molly), Gene n/a, Length 108 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M73.1Confident86.5Confident142 Ų14281.5 Ų81.570%0.747%0.468SS*.  0125.10-173.4170.875.700106.2L3 V38 N40M1-L3 HydrophobicContact CE-CD2 4.11Å; M1-L3 HydrophobicContact CE-CG 4.35Å; M1-V38 HydrophobicContact CE-CG1 4.19Å; M1-N40 PolarHBondContact N-ND2 3.28Å
2L82.3Confident86.9Confident122 Ų12276.3 Ų76.364%0.63944%0.438SS*.  trans-94.9132.6174.7-65.7171.6000107.7F4 V11L2-F4 HydrophobicContact CB-CE2 4.14Å; L2-F4 HydrophobicContact CB-CZ 4.02Å; L2-F4 HydrophobicContact CD1-CZ 4.49Å; L2-V11 HydrophobicContact CD2-CG1 4.23Å
3L85.6Confident87.2Confident62 Ų6275.2 Ų75.233%0.32543%0.428SS..  trans-107.5135.3175.1-70.6166.6000108M1 L12 F23M1-L3 HydrophobicContact CE-CD2 4.11Å; M1-L3 HydrophobicContact CE-CG 4.35Å; L3-L12 HydrophobicContact CB-CB 4.38Å; L3-L12 HydrophobicContact CB-CD1 4.18Å; L3-L12 PolarHBondContact O-N 3.32Å; L3-F23 HydrophobicContact CD1-CD1 4.05Å; L3-F23 HydrophobicContact CD1-CD2 4.13Å; L3-F23 HydrophobicContact CD1-CE1 3.61Å; L3-F23 HydrophobicContact CD1-CE2 3.68Å; L3-F23 HydrophobicContact CD1-CG 4.3Å; L3-F23 HydrophobicContact CD1-CZ 3.42Å; L3-F23 VanDerWaalsContact CD1-CZ 3.42Å
4F90.9Very high87.5Confident122 Ų12276 Ų7654%0.53544%0.435SS..BIsolated β-bridgetrans-112.3147.2-176.6-61.6-79.1000110.8L2 G9 N10 V11L2-F4 HydrophobicContact CB-CE2 4.14Å; L2-F4 HydrophobicContact CB-CZ 4.02Å; L2-F4 HydrophobicContact CD1-CZ 4.49Å; F4-G9 WeakPolarHBondContact CD1-O 3.29Å; F4-N10 WeakPolarHBondContact CA-O 3.39Å; F4-V11 HydrophobicContact CD1-CG2 3.99Å; F4-V11 HydrophobicContact CE1-CG2 3.62Å
5C90.6Very high87.6Confident3 Ų376.3 Ų76.32%0.0243%0.431CS..  trans-73.2130.3176-172.60000110.3T7 C8 G9 N10 L12 C25 C28 Y30C5-T7 PolarHBondContact O-N 3.43Å; C5-T7 PolarHBondContact SG-OG1 3.42Å; C5-C8 VanDerWaalsContact CB-SG 3.59Å; C5-C8 VanDerWaalsContact SG-SG 3.66Å; C5-G9 VanDerWaalsContact O-CA 3.29Å; C5-G9 WeakPolarHBondContact O-CA 3.36Å; C5-G9 PolarHBondContact O-N 2.94Å; C5-N10 WeakPolarHBondContact CB-O 3.45Å; C5-N10 PolarHBondContact N-O 3.44Å; C5-L12 HydrophobicContact CB-CD2 3.84Å; C5-L12 HydrophobicContact CB-CG 4.38Å; C5-C25 HydrophobicContact CB-CB 4.33Å; C5-C28 PolarHBondContact SG-SG 2.89Å; C5-Y30 VanDerWaalsContact SG-CB 3.55Å
6P88.4Confident87.6Confident96 Ų9682 Ų8262%0.62345%0.453SS*.THydrogen-bonded Turntrans-69.2-18.4-178.826.9-34.3000114Y30P6-Y30 HydrophobicContact CG-CD2 4.08Å; P6-Y30 HydrophobicContact CG-CE1 4.46Å; P6-Y30 HydrophobicContact CG-CE2 3.6Å
7T87.1Confident87.3Confident105 Ų10578.5 Ų78.564%0.64444%0.441SS*.THydrogen-bonded Turntrans-95-41.4-176.950.50000113.3C5 C28C5-T7 PolarHBondContact O-N 3.43Å; C5-T7 PolarHBondContact SG-OG1 3.42Å; T7-C28 PolarHBondContact OG1-SG 2.84Å
8C89Confident87Confident52 Ų5285.6 Ų85.635%0.35147%0.469SS..THydrogen-bonded Turntrans-117.6-2.6-175.562.60000114.5C5 N10 C25 T27C5-C8 VanDerWaalsContact CB-SG 3.59Å; C5-C8 VanDerWaalsContact SG-SG 3.66Å; C8-N10 PolarHBondContact O-N 3.13Å; C8-C25 PolarHBondContact SG-SG 2.92Å; C8-T27 PolarHBondContact SG-OG1 3.04Å
9G85.1Confident86.6Confident48 Ų4893.6 Ų93.650%0.49549%0.492SS..  trans68.5-0.3179.600000115.3F4 C5F4-G9 WeakPolarHBondContact CD1-O 3.29Å; C5-G9 VanDerWaalsContact O-CA 3.29Å; C5-G9 WeakPolarHBondContact O-CA 3.36Å; C5-G9 PolarHBondContact O-N 2.94Å
10N88.4Confident86.5Confident75 Ų7592.3 Ų92.340%0.40149%0.49SS..PPolyproline II helixtrans-73.7155.2178.1-80.8-37.2000112.4F4 C5 C8 L12 T27F4-N10 WeakPolarHBondContact CA-O 3.39Å; C5-N10 WeakPolarHBondContact CB-O 3.45Å; C5-N10 PolarHBondContact N-O 3.44Å; C8-N10 PolarHBondContact O-N 3.13Å; N10-L12 PolarHBondContact O-N 3.33Å; N10-T27 WeakPolarHBondContact ND2-CG2 3.46Å; N10-T27 PolarHBondContact ND2-OG1 2.82Å
11V91.3Very high86.6Confident69 Ų6992 Ų9242%0.41849%0.488SS..BIsolated β-bridgetrans-66.6132.6177.2179.30000109.9L2 F4L2-V11 HydrophobicContact CD2-CG1 4.23Å; F4-V11 HydrophobicContact CD1-CG2 3.99Å; F4-V11 HydrophobicContact CE1-CG2 3.62Å
12L91.4Very high87.4Confident20 Ų2089.2 Ų89.211%0.10547%0.47CS..EExtended strand (participates in β ladder)trans-80.9135.9174.3-63.4172.2000110.4L3 C5 N10 F23 C25 Y30L3-L12 HydrophobicContact CB-CB 4.38Å; L3-L12 HydrophobicContact CB-CD1 4.18Å; L3-L12 PolarHBondContact O-N 3.32Å; C5-L12 HydrophobicContact CB-CD2 3.84Å; C5-L12 HydrophobicContact CB-CG 4.38Å; N10-L12 PolarHBondContact O-N 3.33Å; L12-F23 HydrophobicContact CB-CB 4.11Å; L12-F23 HydrophobicContact CD1-CB 4.15Å; L12-C25 HydrophobicContact CD2-CB 3.78Å; L12-Y30 HydrophobicContact CD1-CD1 4.43Å; L12-Y30 HydrophobicContact CD1-CE1 3.89Å; L12-Y30 HydrophobicContact CD2-CD1 3.71Å; L12-Y30 HydrophobicContact CD2-CE1 4.02Å
13I91Very high87.8Confident61 Ų6184.9 Ų84.931%0.31345%0.446SS..EExtended strand (participates in β ladder)trans-101.8155.6174.260.6158.3000110.3E15 F23 A24 N26I13-E15 HydrophobicContact CD1-CG 3.83Å; I13-E15 HydrophobicContact CG1-CG 4.22Å; I13-F23 CarbonylContact O-C 3.51Å; I13-F23 VanDerWaalsContact O-CA 3.24Å; I13-F23 WeakPolarHBondContact O-CA 3.33Å; I13-A24 VanDerWaalsContact CG1-O 3.3Å; I13-A24 WeakPolarHBondContact CG1-O 3.3Å; I13-A24 PolarHBondContact N-O 2.87Å; I13-A24 PolarHBondContact O-N 3.18Å; I13-N26 WeakPolarHBondContact CD1-OD1 3.34Å; I13-N26 WeakPolarHBondContact CG1-OD1 3.43Å
14V90.9Very high88Confident87 Ų8782.1 Ų82.153%0.52743%0.432SS..EExtended strand (participates in β ladder)trans-90124.7174.7-176.20000108.6L21 F23V14-L21 HydrophobicContact CG1-CD2 3.81Å; V14-F23 HydrophobicContact CG2-CD1 3.79Å; V14-F23 HydrophobicContact CG2-CE1 3.48Å; V14-F23 VanDerWaalsContact CG2-CE1 3.48Å; V14-F23 HydrophobicContact CG2-CZ 4.49Å
15E88.8Confident88Confident80 Ų8076.9 Ų76.937%0.37441%0.411SS..EExtended strand (participates in β ladder)trans-125.2152.5174.9-67.8-172.3156.600111I13 R22 A24I13-E15 HydrophobicContact CD1-CG 3.83Å; I13-E15 HydrophobicContact CG1-CG 4.22Å; E15-R22 HydrophobicContact CB-CG 4.26Å; E15-R22 PolarHBondContact N-O 2.83Å; E15-R22 WeakPolarHBondContact O-CG 3.24Å; E15-R22 PolarHBondContact O-N 3.14Å; E15-A24 HydrophobicContact CB-CB 4.44Å; E15-A24 HydrophobicContact CG-CB 4.04Å; E15-A24 VanDerWaalsContact OE2-CB 3.25Å; E15-A24 WeakPolarHBondContact OE2-CB 3.42Å
16E87.9Confident87.9Confident168 Ų16882.6 Ų82.679%0.78544%0.441SS*.EExtended strand (participates in β ladder)trans-82.5122.6171.9-65.6-176.4172.400110L21 R22E16-L21 HydrophobicContact CG-CD2 3.87Å; E16-R22 PolarHBondContact O-NH2 3.31Å
17G82.6Confident87.9Confident23 Ų2382.4 Ų82.424%0.23744%0.438CS..  trans-96.4171.116800000111.5R19 C20G17-R19 PolarHBondContact O-N 2.82Å; G17-C20 VanDerWaalsContact CA-O 3.3Å; G17-C20 WeakPolarHBondContact CA-O 3.49Å; G17-C20 PolarHBondContact N-O 3.49Å
18Q81.1Confident87.9Confident205 Ų20578.8 Ų78.896%0.95842%0.417SS*.SBendtrans-59-22179.8-71.8178-19.700114.6
19R80.1Confident87.9Confident239 Ų23982.4 Ų82.490%0.90244%0.44SS*.SBendtrans-130.4-26.3-176.6-68.3-174.8178-178.4-1114.4G17G17-R19 PolarHBondContact O-N 2.82Å
20C83.5Confident88.2Confident66 Ų6683.5 Ų83.545%0.44643%0.429SS..SBendtrans-150.1158.2-176.1-59.20000110.5G17G17-C20 VanDerWaalsContact CA-O 3.3Å; G17-C20 WeakPolarHBondContact CA-O 3.49Å; G17-C20 PolarHBondContact N-O 3.49Å
21L89.1Confident88.2Confident87 Ų8783.7 Ų83.746%0.45543%0.433SS..EExtended strand (participates in β ladder)trans-64.7139163.2-73.4154.3000109.4V14 E16 I34V14-L21 HydrophobicContact CG1-CD2 3.81Å; E16-L21 HydrophobicContact CG-CD2 3.87Å; L21-I34 HydrophobicContact CB-CB 4.47Å; L21-I34 HydrophobicContact CB-CD1 3.96Å; L21-I34 HydrophobicContact CB-CG1 4.45Å; L21-I34 WeakPolarHBondContact O-CB 3.41Å; L21-I34 WeakPolarHBondContact O-CG1 3.36Å; L21-I34 PolarHBondContact O-N 3.03Å
22R90Very high88Confident84 Ų8484.9 Ų84.932%0.31743%0.434SS..EExtended strand (participates in β ladder)trans-132.9145.2-178.855.8-177.8165.4-174.3-3110.6E15 E16 H32 N33E15-R22 HydrophobicContact CB-CG 4.26Å; E15-R22 PolarHBondContact N-O 2.83Å; E15-R22 WeakPolarHBondContact O-CG 3.24Å; E15-R22 PolarHBondContact O-N 3.14Å; E16-R22 PolarHBondContact O-NH2 3.31Å; R22-H32 CarbonylContact C-O 3.53Å; R22-H32 WeakPolarHBondContact CA-O 2.99Å; R22-N33 WeakPolarHBondContact CB-OD1 3.28Å
23F90.3Very high87.9Confident30 Ų3088.2 Ų88.213%0.13245%0.452CS..EExtended strand (participates in β ladder)trans-85115.5166.2-67.1-68.6000108.5L3 L12 I13 V14 V31 H32 I34L3-F23 HydrophobicContact CD1-CD1 4.05Å; L3-F23 HydrophobicContact CD1-CD2 4.13Å; L3-F23 HydrophobicContact CD1-CE1 3.61Å; L3-F23 HydrophobicContact CD1-CE2 3.68Å; L3-F23 HydrophobicContact CD1-CG 4.3Å; L3-F23 HydrophobicContact CD1-CZ 3.42Å; L3-F23 VanDerWaalsContact CD1-CZ 3.42Å; L12-F23 HydrophobicContact CB-CB 4.11Å; L12-F23 HydrophobicContact CD1-CB 4.15Å; I13-F23 CarbonylContact O-C 3.51Å; I13-F23 VanDerWaalsContact O-CA 3.24Å; I13-F23 WeakPolarHBondContact O-CA 3.33Å; V14-F23 HydrophobicContact CG2-CD1 3.79Å; V14-F23 HydrophobicContact CG2-CE1 3.48Å; V14-F23 VanDerWaalsContact CG2-CE1 3.48Å; V14-F23 HydrophobicContact CG2-CZ 4.49Å; F23-V31 CarbonylContact O-C 3.5Å; F23-V31 WeakPolarHBondContact O-CA 3.25Å; F23-H32 HydrophobicContact CB-CB 4.3Å; F23-H32 PolarHBondContact N-O 3.37Å; F23-H32 PolarHBondContact O-N 3.06Å; F23-I34 HydrophobicContact CD2-CD1 3.93Å; F23-I34 HydrophobicContact CD2-CG1 3.68Å; F23-I34 HydrophobicContact CE1-CD1 4.14Å; F23-I34 HydrophobicContact CE2-CD1 3.46Å; F23-I34 VanDerWaalsContact CE2-CD1 3.46Å; F23-I34 HydrophobicContact CE2-CG1 3.46Å; F23-I34 VanDerWaalsContact CE2-CG1 3.46Å; F23-I34 HydrophobicContact CG-CD1 4.45Å; F23-I34 HydrophobicContact CZ-CD1 3.57Å; F23-I34 HydrophobicContact CZ-CG1 4.12Å
24A90.6Very high87.8Confident4 Ų487.3 Ų87.33%0.03345%0.447CS..EExtended strand (participates in β ladder)trans-113.2148.7179.500000110.5I13 E15 V31I13-A24 VanDerWaalsContact CG1-O 3.3Å; I13-A24 WeakPolarHBondContact CG1-O 3.3Å; I13-A24 PolarHBondContact N-O 2.87Å; I13-A24 PolarHBondContact O-N 3.18Å; E15-A24 HydrophobicContact CB-CB 4.44Å; E15-A24 HydrophobicContact CG-CB 4.04Å; E15-A24 VanDerWaalsContact OE2-CB 3.25Å; E15-A24 WeakPolarHBondContact OE2-CB 3.42Å; A24-V31 HydrophobicContact CB-CG1 4.35Å
25C91.2Very high87.5Confident13 Ų1389.3 Ų89.39%0.08846%0.459CS..EExtended strand (participates in β ladder)trans-98136.6171.6-169.50000110.5C5 C8 L12 T27 C28 Y30C5-C25 HydrophobicContact CB-CB 4.33Å; C8-C25 PolarHBondContact SG-SG 2.92Å; L12-C25 HydrophobicContact CD2-CB 3.78Å; C25-T27 VanDerWaalsContact C-N 3.27Å; C25-T27 PolarHBondContact O-N 2.84Å; C25-T27 PolarHBondContact SG-OG1 2.86Å; C25-C28 VanDerWaalsContact CB-SG 3.51Å; C25-C28 VanDerWaalsContact SG-SG 3.6Å; C25-Y30 PolarHBondContact N-O 2.77Å; C25-Y30 VanDerWaalsContact N-O 3.14Å
26N87.6Confident87.3Confident123 Ų12394.8 Ų94.866%0.65848%0.477SS*.SBendtrans-72.8-19.6178.9-72.410.4000114.1I13I13-N26 WeakPolarHBondContact CD1-OD1 3.34Å; I13-N26 WeakPolarHBondContact CG1-OD1 3.43Å
27T88.1Confident87.2Confident92 Ų9296.4 Ų96.456%0.56448%0.481SS*.SBendtrans-109.6-14.9-171.745.80000113.3C8 N10 C25C8-T27 PolarHBondContact SG-OG1 3.04Å; N10-T27 WeakPolarHBondContact ND2-CG2 3.46Å; N10-T27 PolarHBondContact ND2-OG1 2.82Å; C25-T27 VanDerWaalsContact C-N 3.27Å; C25-T27 PolarHBondContact O-N 2.84Å; C25-T27 PolarHBondContact SG-OG1 2.86Å
28C88.9Confident87.3Confident28 Ų2899 Ų9919%0.18949%0.492CS..SBendtrans-142.6160.7179.9720000111.3C5 T7 C25 Y30C5-C28 PolarHBondContact SG-SG 2.89Å; T7-C28 PolarHBondContact OG1-SG 2.84Å; C25-C28 VanDerWaalsContact CB-SG 3.51Å; C25-C28 VanDerWaalsContact SG-SG 3.6Å; C28-Y30 PolarHBondContact O-N 3.38Å; C28-Y30 VanDerWaalsContact SG-CB 3.53Å
29P89Confident87.5Confident129 Ų12994.5 Ų94.584%0.83848%0.475SS*.SBendtrans-71.111.4-178.4-15.830.9000114.8V31P29-V31 PolarHBondContact O-N 3.21Å
30Y89.6Confident87.7Confident71 Ų7188.4 Ų88.428%0.27846%0.46SS..  trans-68.9123.4-178.8179.6-94.2000110.3C5 P6 L12 C25 C28 H32C5-Y30 VanDerWaalsContact SG-CB 3.55Å; P6-Y30 HydrophobicContact CG-CD2 4.08Å; P6-Y30 HydrophobicContact CG-CE1 4.46Å; P6-Y30 HydrophobicContact CG-CE2 3.6Å; L12-Y30 HydrophobicContact CD1-CD1 4.43Å; L12-Y30 HydrophobicContact CD1-CE1 3.89Å; L12-Y30 HydrophobicContact CD2-CD1 3.71Å; L12-Y30 HydrophobicContact CD2-CE1 4.02Å; C25-Y30 PolarHBondContact N-O 2.77Å; C25-Y30 VanDerWaalsContact N-O 3.14Å; C28-Y30 PolarHBondContact O-N 3.38Å; C28-Y30 VanDerWaalsContact SG-CB 3.53Å; Y30-H32 HydrophobicContact CE1-CB 4.06Å
31V89.2Confident87.8Confident78 Ų7893.6 Ų93.647%0.47347%0.47SS..EExtended strand (participates in β ladder)trans-131.5139176.6-63.30000110F23 A24 P29F23-V31 CarbonylContact O-C 3.5Å; F23-V31 WeakPolarHBondContact O-CA 3.25Å; A24-V31 HydrophobicContact CB-CG1 4.35Å; P29-V31 PolarHBondContact O-N 3.21Å
32H87.3Confident87.6Confident95 Ų9598.5 Ų98.544%0.4449%0.488SS..EExtended strand (participates in β ladder)trans-132.2115.2177.7-171.979.5000111R22 F23 Y30R22-H32 CarbonylContact C-O 3.53Å; R22-H32 WeakPolarHBondContact CA-O 2.99Å; F23-H32 HydrophobicContact CB-CB 4.3Å; F23-H32 PolarHBondContact N-O 3.37Å; F23-H32 PolarHBondContact O-N 3.06Å; Y30-H32 HydrophobicContact CE1-CB 4.06Å
33N89.3Confident87.1Confident89 Ų89103 Ų10348%0.47651%0.506SS..EExtended strand (participates in β ladder)trans-77.7133.6-176.2-63.6-28.3000111.6R22 T35R22-N33 WeakPolarHBondContact CB-OD1 3.28Å; N33-T35 PolarHBondContact O-N 2.87Å
34I88.8Confident86.7Confident43 Ų43106.3 Ų106.322%0.22153%0.531CS..  trans-82.196.7178.5-53.3-179.6000108.8L21 F23 R36L21-I34 HydrophobicContact CB-CB 4.47Å; L21-I34 HydrophobicContact CB-CD1 3.96Å; L21-I34 HydrophobicContact CB-CG1 4.45Å; L21-I34 WeakPolarHBondContact O-CB 3.41Å; L21-I34 WeakPolarHBondContact O-CG1 3.36Å; L21-I34 PolarHBondContact O-N 3.03Å; F23-I34 HydrophobicContact CD2-CD1 3.93Å; F23-I34 HydrophobicContact CD2-CG1 3.68Å; F23-I34 HydrophobicContact CE1-CD1 4.14Å; F23-I34 HydrophobicContact CE2-CD1 3.46Å; F23-I34 VanDerWaalsContact CE2-CD1 3.46Å; F23-I34 HydrophobicContact CE2-CG1 3.46Å; F23-I34 VanDerWaalsContact CE2-CG1 3.46Å; F23-I34 HydrophobicContact CG-CD1 4.45Å; F23-I34 HydrophobicContact CZ-CD1 3.57Å; F23-I34 HydrophobicContact CZ-CG1 4.12Å; I34-R36 VanDerWaalsContact CG2-O 3.28Å; I34-R36 WeakPolarHBondContact CG2-O 3.3Å
35T85.5Confident86.1Confident128 Ų128116.1 Ų116.179%0.78557%0.572SS**  trans-89-21.5179.3550000113.7N33N33-T35 PolarHBondContact O-N 2.87Å
36R84.6Confident85.2Confident196 Ų196123 Ų12374%0.7461%0.608SS**SBendtrans-127152.2-176.461.5-177176.8-144-0.5111.1I34 V38I34-R36 VanDerWaalsContact CG2-O 3.28Å; I34-R36 WeakPolarHBondContact CG2-O 3.3Å; R36-V38 PolarHBondContact O-N 2.95Å
37K84.9Confident84.2Confident201 Ų201125.6 Ų125.687%0.87461%0.613SS**  trans-65.2117.2177.2-171.3173.8-176.2172.80110.1
38V84.1Confident82.9Confident78 Ų78129.4 Ų129.447%0.47363%0.625SS.*  trans-105127.1173.2-175.90000108.2M1 R36M1-V38 HydrophobicContact CE-CG1 4.19Å; R36-V38 PolarHBondContact O-N 2.95Å
39N86.2Confident81.5Confident111 Ų111134 Ų13459%0.59465%0.651SS**  trans-123.3150.4174.464.95.9000110.4
40N84.4Confident79.6Confident110 Ų110133.8 Ų133.859%0.58864%0.643SS**  trans-137.2113.6170.7178.430.1000107.7M1M1-N40 PolarHBondContact N-ND2 3.28Å
41R84.7Confident78Confident175 Ų175134.5 Ų134.566%0.6665%0.652SS**  trans-105.4119.5179.4-68.8-180176.7174.2-2.6108.6Y43R41-Y43 HydrophobicContact CB-CE2 4.13Å
42K84.5Confident76.3Confident191 Ų191136.7 Ų136.783%0.8367%0.665SS**  trans-94.3125.4163.6-168.2169.2-175.4179.10106.9P44K42-P44 WeakPolarHBondContact O-CD 3.1Å
43Y80.4Confident74.8Confident179 Ų179133.2 Ų133.270%0.70265%0.65SS**  trans-90100.4173.1-65.5-85.7000107.5R41R41-Y43 HydrophobicContact CB-CE2 4.13Å
44P82.6Confident73.1Confident99 Ų99131 Ų13164%0.64365%0.648SS**PPolyproline II helixtrans-63.4141.1171.828.6-33.5000108.4K42 L46K42-P44 WeakPolarHBondContact O-CD 3.1Å; P44-L46 PolarHBondContact O-N 3.35Å
45K76.6Confident71.8Confident209 Ų209130.9 Ų130.991%0.90966%0.657SS**PPolyproline II helixtrans-66.1123163.1-67.8-172.9178.5-174.60106.6
46L72.4Confident70.5Confident158 Ų158128.9 Ų128.983%0.82765%0.653SS**PPolyproline II helixtrans-63.2137.8170.9-76.882.4000107.4P44 E48P44-L46 PolarHBondContact O-N 3.35Å; L46-E48 PolarHBondContact O-N 3.29Å
47K66.8Low69.3Low178 Ų178122.8 Ų122.877%0.77465%0.645SS**PPolyproline II helixtrans-59.6132.4168.8-166.7179.7176.6-172.80106.8V49K47-V49 PolarHBondContact O-N 2.84Å; K47-V49 VanDerWaalsContact O-N 3.17Å
48E61.2Low68.2Low172 Ų172115 Ų11580%0.80462%0.619SS**PPolyproline II helixtrans-56.1124.6170.3-54.2-173.7154.900106.1L46 D50L46-E48 PolarHBondContact O-N 3.29Å; E48-D50 PolarHBondContact O-N 3.17Å
49V58.9Low67.3Low123 Ų123111.6 Ų111.675%0.74560%0.597SS**  trans-65.698.6172.9178.80000103.9K47 D51K47-V49 PolarHBondContact O-N 2.84Å; K47-V49 VanDerWaalsContact O-N 3.17Å; V49-D51 PolarHBondContact O-N 3.08Å
50D49.5Very low66.2Low125 Ų125113.7 Ų113.767%0.66860%0.604SS**  trans-50.1118.8163.5-89.7-51.9000104.9E48 V52E48-D50 PolarHBondContact O-N 3.17Å; D50-V52 PolarHBondContact O-N 3.02Å; D50-V52 VanDerWaalsContact O-N 3.08Å
51D55.4Low65.1Low86 Ų86115.7 Ų115.746%0.4661%0.614SS.*  trans-40.8126174.4-77.4-38.4000106.8V49 L53 G54 R105V49-D51 PolarHBondContact O-N 3.08Å; D51-L53 HydrophobicContact CB-CB 4.43Å; D51-L53 PolarHBondContact O-N 3.02Å; D51-G54 PolarHBondContact O-N 2.88Å; D51-R105 IonicContact OD2-CZ 3.83Å; D51-R105 IonicContact OD2-NH1 2.71Å; D51-R105 PolarHBondContact OD2-NH1 3.43Å
52V54.4Low64.6Low124 Ų124108.6 Ų108.675%0.75259%0.59SS**THydrogen-bonded Turntrans-52.9-4.5177.1178.20000112.3D50D50-V52 PolarHBondContact O-N 3.02Å; D50-V52 VanDerWaalsContact O-N 3.08Å
53L54.8Low64.2Low23 Ų23105.3 Ų105.312%0.1258%0.582CS.*THydrogen-bonded Turntrans-106.818.3-177.8-57.3167.5000113.7D51 A58 W59 M80 I82 F94D51-L53 HydrophobicContact CB-CB 4.43Å; D51-L53 PolarHBondContact O-N 3.02Å; L53-A58 VanDerWaalsContact O-CB 3.24Å; L53-A58 WeakPolarHBondContact O-CB 2.96Å; L53-W59 HydrophobicContact CB-CZ2 4.32Å; L53-W59 HydrophobicContact CD1-CZ2 4.25Å; L53-W59 HydrophobicContact CD2-CZ2 4.4Å; L53-M80 HydrophobicContact CB-CE 4.3Å; L53-M80 HydrophobicContact CD2-CE 3.27Å; L53-M80 HydrophobicContact CG-CE 4.41Å; L53-I82 HydrophobicContact CD2-CD1 3.1Å; L53-I82 HydrophobicContact CG-CD1 4.41Å; L53-F94 HydrophobicContact CD1-CD1 4.21Å; L53-F94 HydrophobicContact CD1-CG 4.46Å; L53-F94 HydrophobicContact CD2-CB 4.46Å; L53-F94 HydrophobicContact CD2-CD2 4.34Å; L53-F94 HydrophobicContact CD2-CG 4.27Å
54G55Low64.2Low43 Ų4399.7 Ų99.744%0.44357%0.569SS.*  trans56.959.8161.400000116.6D51 A58D51-G54 PolarHBondContact O-N 2.88Å; G54-A58 WeakPolarHBondContact O-CB 3.24Å; G54-A58 PolarHBondContact O-N 2.97Å
55G61.1Low64.3Low40 Ų4097.7 Ų97.741%0.41255%0.554SS.*THydrogen-bonded Turntrans53.8-155.4166.800000115.8
56A57.8Low64.5Low85 Ų8592.2 Ų92.270%0.70255%0.548SS*.THydrogen-bonded Turntrans-77-30.7178.500000112.9W59A56-W59 PolarHBondContact O-N 3.13Å
57A59.1Low64.9Low68 Ų6886 Ų8656%0.56252%0.515SS*.G310 helixtrans-75.4-27.3-174.200000114W59 E60A57-W59 PolarHBondContact O-N 3.01Å; A57-W59 VanDerWaalsContact O-N 3.17Å; A57-E60 WeakPolarHBondContact O-CB 3.37Å; A57-E60 PolarHBondContact O-N 2.71Å
58A62.5Low65.8Low39 Ų3981.8 Ų81.832%0.32250%0.504SS..G310 helixtrans-67.4-15.2177.100000113.4L53 G54 V62L53-A58 VanDerWaalsContact O-CB 3.24Å; L53-A58 WeakPolarHBondContact O-CB 2.96Å; G54-A58 WeakPolarHBondContact O-CB 3.24Å; G54-A58 PolarHBondContact O-N 2.97Å; A58-V62 WeakPolarHBondContact O-CG2 3.19Å
59W64.2Low66.9Low5 Ų573.6 Ų73.62%0.01947%0.466CS..G310 helixtrans-96.2-1.3179.4-6588000113.7L53 A56 A57 V62 M80 F94 K96L53-W59 HydrophobicContact CB-CZ2 4.32Å; L53-W59 HydrophobicContact CD1-CZ2 4.25Å; L53-W59 HydrophobicContact CD2-CZ2 4.4Å; A56-W59 PolarHBondContact O-N 3.13Å; A57-W59 PolarHBondContact O-N 3.01Å; A57-W59 VanDerWaalsContact O-N 3.17Å; W59-V62 HydrophobicContact CE3-CB 4.5Å; W59-V62 HydrophobicContact CE3-CG2 4.3Å; W59-M80 HydrophobicContact CH2-CB 4.38Å; W59-M80 HydrophobicContact CZ3-CB 4.37Å; W59-F94 HydrophobicContact CH2-CB 4.41Å; W59-K96 HydrophobicContact CB-CD 4.04Å; W59-K96 VanDerWaalsContact CB-NZ 3.34Å; W59-K96 HydrophobicContact CD2-CB 4.01Å; W59-K96 HydrophobicContact CD2-CD 3.3Å; W59-K96 HydrophobicContact CD2-CG 4.3Å; W59-K96 HydrophobicContact CE3-CB 3.63Å; W59-K96 HydrophobicContact CE3-CD 3.72Å; W59-K96 HydrophobicContact CE3-CG 4.33Å; W59-K96 HydrophobicContact CG-CD 3.43Å; W59-K96 VanDerWaalsContact CG-CD 3.43Å; W59-K96 HydrophobicContact CH2-CB 3.67Å; W59-K96 HydrophobicContact CZ2-CB 4.05Å; W59-K96 HydrophobicContact CZ2-CD 4.29Å; W59-K96 HydrophobicContact CZ3-CB 3.45Å; W59-K96 VanDerWaalsContact CZ3-CB 3.45Å; W59-K96 HydrophobicContact CZ3-CD 4.35Å
60E63.4Low68.1Low156 Ų15672.1 Ų72.173%0.72946%0.459SS*.THydrogen-bonded Turntrans-77.7-25.3-174.2-159.9174.4-172.100112.7A57A57-E60 WeakPolarHBondContact O-CB 3.37Å; A57-E60 PolarHBondContact O-N 2.71Å
61N62.2Low69.8Low151 Ų15173.2 Ų73.281%0.80746%0.458SS*.THydrogen-bonded Turntrans-116.921-178.4-66.5-74.2000113.3
62V72.9Confident71.1Confident26 Ų2671.3 Ų71.316%0.15845%0.451CS..  trans-95.9138.2-175.7-164.80000109.3A58 W59 Y78 F79 M80A58-V62 WeakPolarHBondContact O-CG2 3.19Å; W59-V62 HydrophobicContact CE3-CB 4.5Å; W59-V62 HydrophobicContact CE3-CG2 4.3Å; V62-Y78 WeakPolarHBondContact O-CD1 3.05Å; V62-F79 WeakPolarHBondContact CG1-O 3.29Å; V62-M80 HydrophobicContact CG1-CB 4.09Å
63D77.1Confident72.5Confident122 Ų12273.1 Ų73.165%0.65245%0.451SS*.  trans-61.8147.3177.7-74.2-43.3000111.7Y78 F79D63-Y78 WeakPolarHBondContact O-CA 3.12Å; D63-F79 HydrophobicContact CB-CD1 4.32Å; D63-F79 HydrophobicContact CB-CE1 3.51Å; D63-F79 HydrophobicContact CB-CZ 4.03Å; D63-F79 VanDerWaalsContact O-CD1 3.26Å; D63-F79 WeakPolarHBondContact O-CD1 3.48Å; D63-F79 PolarHBondContact O-N 3.35Å; D63-F79 VanDerWaalsContact O-N 3.1Å
64S80.8Confident73.9Confident62 Ų6275.3 Ų75.343%0.43446%0.46SS..EExtended strand (participates in β ladder)trans-106.2131.8178.466.40000111.3A77S64-A77 CarbonylContact C-O 3.6Å; S64-A77 VanDerWaalsContact CA-O 3.3Å; S64-A77 WeakPolarHBondContact CA-O 2.78Å
65T83.3Confident75.3Confident56 Ų5677 Ų7734%0.34446%0.464SS..EExtended strand (participates in β ladder)trans-108.8153.7176.3-65.80000110.9E67 R76 A77 F79T65-E67 PolarHBondContact O-N 2.67Å; T65-R76 WeakPolarHBondContact O-CA 3.11Å; T65-A77 PolarHBondContact N-O 3.32Å; T65-A77 PolarHBondContact O-N 3.38Å; T65-A77 VanDerWaalsContact O-N 3.1Å; T65-F79 WeakPolarHBondContact OG1-CD1 3.47Å; T65-F79 WeakPolarHBondContact OG1-CE1 3.42Å
66A82.5Confident76.4Confident94 Ų9482.4 Ų82.478%0.77747%0.472SS*.  trans-78.954.1177.400000112.2P75A66-P75 CarbonylContact C-O 3.52Å; A66-P75 WeakPolarHBondContact CA-O 3.37Å
67E80.8Confident77.7Confident29 Ų2978.4 Ų78.414%0.13644%0.438CS..  trans-106.1143.4176.858.8175.4-136.800111.1T65 P75 R76 A77 Y95 W106T65-E67 PolarHBondContact O-N 2.67Å; E67-P75 CarbonylContact O-C 3.53Å; E67-P75 VanDerWaalsContact O-C 3.27Å; E67-R76 PolarHBondContact O-N 2.93Å; E67-A77 HydrophobicContact CG-CB 3.5Å; E67-A77 VanDerWaalsContact CG-CB 3.5Å; E67-A77 WeakPolarHBondContact OE1-CB 3.49Å; E67-Y95 VanDerWaalsContact CD-CE1 3.41Å; E67-Y95 WeakPolarHBondContact OE1-CB 2.94Å; E67-Y95 WeakPolarHBondContact OE1-CD1 3.31Å; E67-Y95 WeakPolarHBondContact OE1-CE1 3.35Å; E67-Y95 WeakPolarHBondContact OE2-CD1 2.9Å; E67-Y95 WeakPolarHBondContact OE2-CE1 3.3Å; E67-W106 VanDerWaalsContact OE1-CZ2 3.24Å; E67-W106 WeakPolarHBondContact OE1-CZ2 2.9Å
68T84.9Confident79Confident89 Ų8978.8 Ų78.855%0.54643%0.426SS..  trans-88.8123-173.1-54.70000110E73 H74T68-E73 HydrophobicContact CG2-CB 4.35Å; T68-H74 WeakPolarHBondContact CA-O 3.43Å
69C84.7Confident80.1Confident0 Ų079.5 Ų79.50%042%0.422CS..  trans-65126.9177.8179.70000110.5K71 C72 E73 H74 C97 W106C69-K71 PolarHBondContact O-N 3.49Å; C69-C72 VanDerWaalsContact SG-SG 3.63Å; C69-E73 VanDerWaalsContact O-CA 3.31Å; C69-E73 WeakPolarHBondContact O-CA 3.24Å; C69-E73 PolarHBondContact O-N 2.94Å; C69-H74 PolarHBondContact N-O 3.36Å; C69-C97 HydrophobicContact CB-CB 4.18Å; C69-W106 HydrophobicContact CB-CH2 3.77Å; C69-W106 HydrophobicContact CB-CZ3 4.11Å; C69-W106 VanDerWaalsContact SG-CZ3 3.55Å
70P84.8Confident81Confident92 Ų9281.3 Ų81.360%0.59743%0.431SS*.THydrogen-bonded Turntrans-66.7-12.7-176.426.5-35.6000114W106P70-W106 HydrophobicContact CG-CD2 4.19Å; P70-W106 HydrophobicContact CG-CE3 4.4Å; P70-W106 HydrophobicContact CG-CG 4.44Å
71K83.6Confident81.9Confident148 Ų14879 Ų7964%0.64342%0.42SS*.THydrogen-bonded Turntrans-102.6-34.9-175.5-168.2177.1-178.2-174.40114.2C69 H104C69-K71 PolarHBondContact O-N 3.49Å; K71-H104 HydrophobicContact CB-CB 4.42Å; K71-H104 HydrophobicContact CD-CB 4.21Å
72C83.8Confident82.8Confident46 Ų4673.5 Ų73.531%0.31139%0.39SS..THydrogen-bonded Turntrans-128.25.1-173.567.50000113.4C69 H74 C97 C102C69-C72 VanDerWaalsContact SG-SG 3.63Å; C72-H74 PolarHBondContact O-N 3.05Å; C72-C97 PolarHBondContact SG-SG 3.03Å; C72-C102 HydrophobicContact CB-CB 4.19Å
73E83.4Confident82.9Confident162 Ų16276.9 Ų76.976%0.75740%0.404SS*.  trans55.419.4176.8-60.7176.8163.700114.2T68 C69T68-E73 HydrophobicContact CG2-CB 4.35Å; C69-E73 VanDerWaalsContact O-CA 3.31Å; C69-E73 WeakPolarHBondContact O-CA 3.24Å; C69-E73 PolarHBondContact O-N 2.94Å
74H83.5Confident82.7Confident68 Ų6874.3 Ų74.332%0.31539%0.393SS..  trans-69.7133177.1-165.769.1000109.7T68 C69 C72 R76T68-H74 WeakPolarHBondContact CA-O 3.43Å; C69-H74 PolarHBondContact N-O 3.36Å; C72-H74 PolarHBondContact O-N 3.05Å; H74-R76 PolarHBondContact CD2-O 3.27Å; H74-R76 PolarHBondContact O-N 2.98Å; H74-R76 VanDerWaalsContact O-N 3.17Å
75P84.9Confident82.6Confident79 Ų7979.4 Ų79.451%0.51340%0.403SS..SBendtrans-79.45.5-170.932.5-38.3000114.4A66 E67A66-P75 CarbonylContact C-O 3.52Å; A66-P75 WeakPolarHBondContact CA-O 3.37Å; E67-P75 CarbonylContact O-C 3.53Å; E67-P75 VanDerWaalsContact O-C 3.27Å
76R84Confident82.3Confident154 Ų15481 Ų8158%0.58142%0.417SS*.  trans-132.2137.9-179.5-69.6-171.5176.3-177.1-1.5111.6T65 E67 H74 C98T65-R76 WeakPolarHBondContact O-CA 3.11Å; E67-R76 PolarHBondContact O-N 2.93Å; H74-R76 PolarHBondContact CD2-O 3.27Å; H74-R76 PolarHBondContact O-N 2.98Å; H74-R76 VanDerWaalsContact O-N 3.17Å; R76-C98 HydrophobicContact CB-CB 4.27Å; R76-C98 PolarHBondContact O-N 2.8Å
77A86.1Confident81.8Confident0 Ų080.4 Ų80.40%041%0.411CS..EExtended strand (participates in β ladder)trans-142.6151.6169.600000110.6S64 T65 E67 K96 C98 W106S64-A77 CarbonylContact C-O 3.6Å; S64-A77 VanDerWaalsContact CA-O 3.3Å; S64-A77 WeakPolarHBondContact CA-O 2.78Å; T65-A77 PolarHBondContact N-O 3.32Å; T65-A77 PolarHBondContact O-N 3.38Å; T65-A77 VanDerWaalsContact O-N 3.1Å; E67-A77 HydrophobicContact CG-CB 3.5Å; E67-A77 VanDerWaalsContact CG-CB 3.5Å; E67-A77 WeakPolarHBondContact OE1-CB 3.49Å; A77-K96 CarbonylContact C-O 3.52Å; A77-K96 WeakPolarHBondContact CA-O 3.48Å; A77-K96 WeakPolarHBondContact CB-O 3.35Å; A77-C98 VanDerWaalsContact C-SG 3.51Å; A77-C98 WeakPolarHBondContact CA-SG 3.46Å; A77-W106 HydrophobicContact CB-CH2 3.67Å; A77-W106 HydrophobicContact CB-CZ2 3.99Å
78Y85.6Confident81.8Confident77 Ų7786.6 Ų86.630%0.30245%0.445SS..EExtended strand (participates in β ladder)trans-77.6137.3168.9-60.5-69000109.2V62 D63 Y95 K96 C98V62-Y78 WeakPolarHBondContact O-CD1 3.05Å; D63-Y78 WeakPolarHBondContact O-CA 3.12Å; Y78-Y95 CarbonylContact O-C 3.42Å; Y78-Y95 WeakPolarHBondContact O-CA 3.3Å; Y78-K96 PolarHBondContact N-O 2.83Å; Y78-K96 PolarHBondContact O-N 2.82Å; Y78-C98 HydrophobicContact CD2-CB 4.33Å; Y78-C98 VanDerWaalsContact CD2-SG 3.54Å; Y78-C98 HydrophobicContact CE2-CB 3.89Å; Y78-C98 WeakPolarHBondContact CE2-SG 3.34Å
79F85.4Confident81.2Confident54 Ų5486.5 Ų86.524%0.23744%0.439CS..EExtended strand (participates in β ladder)trans-124.8137.8178.377.8-76.8000111.4V62 D63 T65 T93 F94 Y95V62-F79 WeakPolarHBondContact CG1-O 3.29Å; D63-F79 HydrophobicContact CB-CD1 4.32Å; D63-F79 HydrophobicContact CB-CE1 3.51Å; D63-F79 HydrophobicContact CB-CZ 4.03Å; D63-F79 VanDerWaalsContact O-CD1 3.26Å; D63-F79 WeakPolarHBondContact O-CD1 3.48Å; D63-F79 PolarHBondContact O-N 3.35Å; D63-F79 VanDerWaalsContact O-N 3.1Å; T65-F79 WeakPolarHBondContact OG1-CD1 3.47Å; T65-F79 WeakPolarHBondContact OG1-CE1 3.42Å; F79-T93 HydrophobicContact CB-CG2 4.22Å; F79-T93 HydrophobicContact CD2-CG2 4.24Å; F79-F94 CarbonylContact C-O 3.56Å; F79-F94 VanDerWaalsContact CA-O 3.29Å; F79-F94 WeakPolarHBondContact CA-O 3.34Å; F79-Y95 HydrophobicContact CB-CD1 3.37Å; F79-Y95 HydrophobicContact CB-CE1 3.37Å; F79-Y95 HydrophobicContact CG-CE1 4.38Å
80M83Confident80.8Confident43 Ų4392 Ų9221%0.21248%0.475CS..EExtended strand (participates in β ladder)trans-133.3128.8176.2-170.816067.600109.9L53 W59 V62 I82 F94L53-M80 HydrophobicContact CB-CE 4.3Å; L53-M80 HydrophobicContact CD2-CE 3.27Å; L53-M80 HydrophobicContact CG-CE 4.41Å; W59-M80 HydrophobicContact CH2-CB 4.38Å; W59-M80 HydrophobicContact CZ3-CB 4.37Å; V62-M80 HydrophobicContact CG1-CB 4.09Å; M80-I82 HydrophobicContact CE-CD1 3.5Å; M80-I82 HydrophobicContact CE-CG1 4.25Å; M80-I82 HydrophobicContact CG-CD1 4.25Å; M80-I82 HydrophobicContact CG-CG1 4Å; M80-I82 HydrophobicContact SD-CD1 4.45Å; M80-F94 PolarHBondContact N-O 2.78Å; M80-F94 PolarHBondContact O-N 3.35Å
81Q82.2Confident80.6Confident107 Ų10792.4 Ų92.450%0.547%0.47SS..EExtended strand (participates in β ladder)trans-96125.5175.9-68.8-175.2-30.800110M91 T92 T93Q81-M91 HydrophobicContact CB-CB 4.22Å; Q81-M91 HydrophobicContact CB-SD 4.27Å; Q81-T92 WeakPolarHBondContact CA-O 3.28Å; Q81-T93 HydrophobicContact CG-CG2 3.99Å; Q81-T93 PolarHBondContact NE2-OG1 3.1Å
82I80.8Confident80.6Confident36 Ų3686.9 Ų86.919%0.18545%0.448CS..EExtended strand (participates in β ladder)trans-132.1134.3-178.3-57.8171.1000108.7L53 M80 T84 T92 F94L53-I82 HydrophobicContact CD2-CD1 3.1Å; L53-I82 HydrophobicContact CG-CD1 4.41Å; M80-I82 HydrophobicContact CE-CD1 3.5Å; M80-I82 HydrophobicContact CE-CG1 4.25Å; M80-I82 HydrophobicContact CG-CD1 4.25Å; M80-I82 HydrophobicContact CG-CG1 4Å; M80-I82 HydrophobicContact SD-CD1 4.45Å; I82-T84 HydrophobicContact CG2-CG2 4.42Å; I82-T84 PolarHBondContact O-N 3.39Å; I82-T92 PolarHBondContact N-O 3.17Å; I82-T92 PolarHBondContact O-N 2.91Å; I82-T92 PolarHBondContact O-OG1 3.19Å; I82-F94 HydrophobicContact CB-CD2 4.27Å; I82-F94 HydrophobicContact CB-CE2 4.08Å; I82-F94 HydrophobicContact CD1-CD2 3.99Å; I82-F94 HydrophobicContact CD1-CE2 4.22Å; I82-F94 HydrophobicContact CG1-CD2 4.3Å
83Q75.9Confident80.7Confident96 Ų9685.5 Ų85.545%0.44944%0.438SS..  trans-78.8104.3165.8-67.4-174.232.600108.6R85 M91Q83-R85 VanDerWaalsContact C-N 3.32Å; Q83-M91 HydrophobicContact CG-CE 4.48Å; Q83-M91 HydrophobicContact CG-CG 3.74Å
84T73.5Confident80.8Confident68 Ų6879 Ų7942%0.41741%0.408SS..  trans-82.6-11.1176.855.10000113.3I82 T92 F94I82-T84 HydrophobicContact CG2-CG2 4.42Å; I82-T84 PolarHBondContact O-N 3.39Å; T84-T92 WeakPolarHBondContact CG2-OG1 3.39Å; T84-F94 HydrophobicContact CG2-CE2 4.07Å; T84-F94 HydrophobicContact CG2-CZ 4.06Å
85R78.3Confident80.9Confident170 Ų17077.5 Ų77.564%0.64240%0.4SS*.SBendtrans-139.6-174-176.8-65.8-164.6-171.1160-2.8110.9Q83 E89Q83-R85 VanDerWaalsContact C-N 3.32Å; R85-E89 WeakPolarHBondContact CD-OE1 3.45Å; R85-E89 VanDerWaalsContact CD-OE2 3.28Å; R85-E89 WeakPolarHBondContact CD-OE2 3.47Å; R85-E89 IonicContact CZ-OE1 3.99Å; R85-E89 IonicContact NE-OE2 3.57Å; R85-E89 IonicContact NH1-OE1 2.91Å; R85-E89 PolarHBondContact NH1-OE1 3.17Å; R85-E89 IonicContact NH1-OE2 3.9Å
86S76.1Confident80.9Confident90 Ų9075.4 Ų75.463%0.62938%0.382SS*.  trans-49152.2176.1-57.50000112.2D88 E89S86-D88 PolarHBondContact O-N 2.88Å; S86-E89 PolarHBondContact O-N 3.24Å; S86-E89 VanDerWaalsContact O-N 3.13Å
87A72.5Confident80.9Confident81 Ų8168.2 Ų68.267%0.66936%0.356SS*.THydrogen-bonded Turntrans-61.7-5.6-175.400000115.4
88D81.4Confident80.7Confident159 Ų15969.7 Ų69.785%0.8537%0.366SS*.THydrogen-bonded Turntrans-82.5-12.5177.5-57-46.5000113.2S86S86-D88 PolarHBondContact O-N 2.88Å
89E72.6Confident80.4Confident87 Ų8768.5 Ų68.541%0.40736%0.364SS..SBendtrans-98146.1174.6-72.2-171.4-169.500111.9R85 S86R85-E89 WeakPolarHBondContact CD-OE1 3.45Å; R85-E89 VanDerWaalsContact CD-OE2 3.28Å; R85-E89 WeakPolarHBondContact CD-OE2 3.47Å; R85-E89 IonicContact CZ-OE1 3.99Å; R85-E89 IonicContact NE-OE2 3.57Å; R85-E89 IonicContact NH1-OE1 2.91Å; R85-E89 PolarHBondContact NH1-OE1 3.17Å; R85-E89 IonicContact NH1-OE2 3.9Å; S86-E89 PolarHBondContact O-N 3.24Å; S86-E89 VanDerWaalsContact O-N 3.13Å
90P75.9Confident79.7Confident116 Ų11670.9 Ų70.975%0.75339%0.394SS*.PPolyproline II helixtrans-61.8149.5175.727.1-34.2000111.4T92P90-T92 PolarHBondContact O-N 2.94Å
91M80.4Confident79.4Confident100 Ų10077.7 Ų77.749%0.49343%0.426SS..PPolyproline II helixtrans-62.9133.2178.5-59-178.1-178.800110.5Q81 Q83Q81-M91 HydrophobicContact CB-CB 4.22Å; Q81-M91 HydrophobicContact CB-SD 4.27Å; Q83-M91 HydrophobicContact CG-CE 4.48Å; Q83-M91 HydrophobicContact CG-CG 3.74Å
92T83.2Confident79.2Confident31 Ų3174 Ų7419%0.1941%0.412CS..EExtended strand (participates in β ladder)trans-84.4135.6172.950.40000110.3Q81 I82 T84 P90 F94Q81-T92 WeakPolarHBondContact CA-O 3.28Å; I82-T92 PolarHBondContact N-O 3.17Å; I82-T92 PolarHBondContact O-N 2.91Å; I82-T92 PolarHBondContact O-OG1 3.19Å; T84-T92 WeakPolarHBondContact CG2-OG1 3.39Å; P90-T92 PolarHBondContact O-N 2.94Å; T92-F94 WeakPolarHBondContact OG1-CE2 3.45Å
93T85Confident79Confident17 Ų1773.9 Ų73.910%0.10442%0.419CS..EExtended strand (participates in β ladder)trans-98.8126.6-179.2-48.60000109.9F79 Q81 Y95 D108F79-T93 HydrophobicContact CB-CG2 4.22Å; F79-T93 HydrophobicContact CD2-CG2 4.24Å; Q81-T93 HydrophobicContact CG-CG2 3.99Å; Q81-T93 PolarHBondContact NE2-OG1 3.1Å; T93-Y95 HydrophobicContact CG2-CD1 4.07Å; T93-Y95 HydrophobicContact CG2-CE1 3.36Å; T93-Y95 HydrophobicContact CG2-CE2 4.14Å; T93-Y95 VanDerWaalsContact CG2-CZ 3.44Å; T93-D108 PolarHBondContact O-N 2.9Å
94F85.8Confident79.3Confident27 Ų2772.4 Ų72.412%0.11841%0.412CS..EExtended strand (participates in β ladder)trans-108.9135.2175.8-67.5-88.2000109.8L53 W59 F79 M80 I82 T84 T92 R107L53-F94 HydrophobicContact CD1-CD1 4.21Å; L53-F94 HydrophobicContact CD1-CG 4.46Å; L53-F94 HydrophobicContact CD2-CB 4.46Å; L53-F94 HydrophobicContact CD2-CD2 4.34Å; L53-F94 HydrophobicContact CD2-CG 4.27Å; W59-F94 HydrophobicContact CH2-CB 4.41Å; F79-F94 CarbonylContact C-O 3.56Å; F79-F94 VanDerWaalsContact CA-O 3.29Å; F79-F94 WeakPolarHBondContact CA-O 3.34Å; M80-F94 PolarHBondContact N-O 2.78Å; M80-F94 PolarHBondContact O-N 3.35Å; I82-F94 HydrophobicContact CB-CD2 4.27Å; I82-F94 HydrophobicContact CB-CE2 4.08Å; I82-F94 HydrophobicContact CD1-CD2 3.99Å; I82-F94 HydrophobicContact CD1-CE2 4.22Å; I82-F94 HydrophobicContact CG1-CD2 4.3Å; T84-F94 HydrophobicContact CG2-CE2 4.07Å; T84-F94 HydrophobicContact CG2-CZ 4.06Å; T92-F94 WeakPolarHBondContact OG1-CE2 3.45Å; F94-R107 HydrophobicContact CD1-CB 4.33Å; F94-R107 HydrophobicContact CE1-CB 4.43Å; F94-R107 HydrophobicContact CE1-CG 4.45Å; F94-R107 VanDerWaalsContact CE1-NE 3.34Å; F94-R107 VanDerWaalsContact CZ-NH2 3.33Å
95Y85.6Confident79.8Confident36 Ų3673.5 Ų73.514%0.14141%0.408CS..EExtended strand (participates in β ladder)trans-117.3144.7-176.8-62.1-57.6000111E67 Y78 F79 T93 R105 W106 D108E67-Y95 VanDerWaalsContact CD-CE1 3.41Å; E67-Y95 WeakPolarHBondContact OE1-CB 2.94Å; E67-Y95 WeakPolarHBondContact OE1-CD1 3.31Å; E67-Y95 WeakPolarHBondContact OE1-CE1 3.35Å; E67-Y95 WeakPolarHBondContact OE2-CD1 2.9Å; E67-Y95 WeakPolarHBondContact OE2-CE1 3.3Å; Y78-Y95 CarbonylContact O-C 3.42Å; Y78-Y95 WeakPolarHBondContact O-CA 3.3Å; F79-Y95 HydrophobicContact CB-CD1 3.37Å; F79-Y95 HydrophobicContact CB-CE1 3.37Å; F79-Y95 HydrophobicContact CG-CE1 4.38Å; T93-Y95 HydrophobicContact CG2-CD1 4.07Å; T93-Y95 HydrophobicContact CG2-CE1 3.36Å; T93-Y95 HydrophobicContact CG2-CE2 4.14Å; T93-Y95 VanDerWaalsContact CG2-CZ 3.44Å; Y95-R105 CarbonylContact O-C 3.27Å; Y95-R105 WeakPolarHBondContact O-CA 2.99Å; Y95-W106 AromaticContact CD2-CD1 3.68Å; Y95-W106 AromaticContact CD2-NE1 3.34Å; Y95-W106 VanDerWaalsContact CD2-NE1 3.34Å; Y95-W106 HydrophobicContact CG-CZ2 4.38Å; Y95-W106 AromaticContact CG-NE1 3.72Å; Y95-W106 PolarHBondContact N-O 3.13Å; Y95-W106 PolarHBondContact O-N 3.05Å; Y95-D108 HydrophobicContact CD2-CB 4.23Å; Y95-D108 HydrophobicContact CE2-CB 3.52Å
96K85.3Confident80.1Confident35 Ų3567.9 Ų67.915%0.15239%0.387CS..EExtended strand (participates in β ladder)trans-139126.5175.2-178.3-173.3174.2-160.80110W59 A77 Y78 C98 H104 R105W59-K96 HydrophobicContact CB-CD 4.04Å; W59-K96 VanDerWaalsContact CB-NZ 3.34Å; W59-K96 HydrophobicContact CD2-CB 4.01Å; W59-K96 HydrophobicContact CD2-CD 3.3Å; W59-K96 HydrophobicContact CD2-CG 4.3Å; W59-K96 HydrophobicContact CE3-CB 3.63Å; W59-K96 HydrophobicContact CE3-CD 3.72Å; W59-K96 HydrophobicContact CE3-CG 4.33Å; W59-K96 HydrophobicContact CG-CD 3.43Å; W59-K96 VanDerWaalsContact CG-CD 3.43Å; W59-K96 HydrophobicContact CH2-CB 3.67Å; W59-K96 HydrophobicContact CZ2-CB 4.05Å; W59-K96 HydrophobicContact CZ2-CD 4.29Å; W59-K96 HydrophobicContact CZ3-CB 3.45Å; W59-K96 VanDerWaalsContact CZ3-CB 3.45Å; W59-K96 HydrophobicContact CZ3-CD 4.35Å; A77-K96 CarbonylContact C-O 3.52Å; A77-K96 WeakPolarHBondContact CA-O 3.48Å; A77-K96 WeakPolarHBondContact CB-O 3.35Å; Y78-K96 PolarHBondContact N-O 2.83Å; Y78-K96 PolarHBondContact O-N 2.82Å; K96-C98 PolarHBondContact O-N 2.8Å; K96-H104 CarbonylContact C-O 3.49Å; K96-H104 WeakPolarHBondContact CA-O 2.73Å; K96-R105 HydrophobicContact CB-CG 4.15Å; K96-R105 HydrophobicContact CG-CG 3.95Å
97C85.3Confident80.4Confident3 Ų370.6 Ų70.62%0.0238%0.383CS..EExtended strand (participates in β ladder)trans-58.1133.5178.8-172.50000112.1C69 C72 N99 C102 H104 W106C69-C97 HydrophobicContact CB-CB 4.18Å; C72-C97 PolarHBondContact SG-SG 3.03Å; C97-N99 PolarHBondContact O-N 2.93Å; C97-N99 VanDerWaalsContact SG-CB 3.59Å; C97-N99 PolarHBondContact SG-N 2.85Å; C97-N99 VanDerWaalsContact SG-N 3.38Å; C97-C102 HydrophobicContact CB-CB 4.37Å; C97-H104 PolarHBondContact N-O 3.36Å; C97-W106 HydrophobicContact CB-CH2 4.43Å; C97-W106 HydrophobicContact CB-CZ3 4.05Å
98C81Confident80.4Confident31 Ų3174.4 Ų74.421%0.20939%0.393CS..SBendtrans-71.2-12.6175.1-63.80000113.6R76 A77 Y78 K96 A100R76-C98 HydrophobicContact CB-CB 4.27Å; R76-C98 PolarHBondContact O-N 2.8Å; A77-C98 VanDerWaalsContact C-SG 3.51Å; A77-C98 WeakPolarHBondContact CA-SG 3.46Å; Y78-C98 HydrophobicContact CD2-CB 4.33Å; Y78-C98 VanDerWaalsContact CD2-SG 3.54Å; Y78-C98 HydrophobicContact CE2-CB 3.89Å; Y78-C98 WeakPolarHBondContact CE2-SG 3.34Å; K96-C98 PolarHBondContact O-N 2.8Å; C98-A100 PolarHBondContact O-N 2.91Å
99N79.8Confident80.3Confident51 Ų5170.2 Ų70.227%0.27337%0.37SS..  trans-74.5114.9177.1-174.1-8.8000110.2C97 Q101 C102 G103C97-N99 PolarHBondContact O-N 2.93Å; C97-N99 VanDerWaalsContact SG-CB 3.59Å; C97-N99 PolarHBondContact SG-N 2.85Å; C97-N99 VanDerWaalsContact SG-N 3.38Å; N99-Q101 PolarHBondContact O-N 3.1Å; N99-Q101 VanDerWaalsContact O-N 3.13Å; N99-Q101 PolarHBondContact OD1-N 2.81Å; N99-C102 HydrophobicContact CB-CB 4.03Å; N99-C102 PolarHBondContact O-N 3.31Å; N99-G103 PolarHBondContact O-N 2.97Å
100A71.1Confident80.7Confident105 Ų10569.3 Ų69.387%0.86837%0.368SS*.THydrogen-bonded Turntrans-56.7-26.2178.700000113.6C98C98-A100 PolarHBondContact O-N 2.91Å
101Q76.5Confident81Confident186 Ų18666.7 Ų66.787%0.86935%0.346SS*.THydrogen-bonded Turntrans-82.9-23.2177.2-61.9-178.4-2.500113.3N99N99-Q101 PolarHBondContact O-N 3.1Å; N99-Q101 VanDerWaalsContact O-N 3.13Å; N99-Q101 PolarHBondContact OD1-N 2.81Å
102C78.3Confident81Confident30 Ų3064.7 Ų64.720%0.20334%0.338CS..THydrogen-bonded Turntrans-94.4-53.9-176.9-175.50000111.3C72 C97 N99 H104C72-C102 HydrophobicContact CB-CB 4.19Å; C97-C102 HydrophobicContact CB-CB 4.37Å; N99-C102 HydrophobicContact CB-CB 4.03Å; N99-C102 PolarHBondContact O-N 3.31Å; C102-H104 PolarHBondContact O-N 3.4Å; C102-H104 VanDerWaalsContact SG-CB 3.54Å
103G75.5Confident80.9Confident33 Ų3366.8 Ų66.834%0.3435%0.347SS..  trans53.515.2-179.600000115.3N99N99-G103 PolarHBondContact O-N 2.97Å
104H82.9Confident80.6Confident65 Ų6570.1 Ų70.130%0.30136%0.363SS..  trans-65.3136.7-174.7-174.756.2000110.3K71 K96 C97 C102 W106K71-H104 HydrophobicContact CB-CB 4.42Å; K71-H104 HydrophobicContact CD-CB 4.21Å; K96-H104 CarbonylContact C-O 3.49Å; K96-H104 WeakPolarHBondContact CA-O 2.73Å; C97-H104 PolarHBondContact N-O 3.36Å; C102-H104 PolarHBondContact O-N 3.4Å; C102-H104 VanDerWaalsContact SG-CB 3.54Å; H104-W106 AromaticContact CD2-CE3 3.57Å; H104-W106 VanDerWaalsContact O-CZ3 3.3Å; H104-W106 WeakPolarHBondContact O-CZ3 3.26Å
105R84Confident80.2Confident91 Ų9173.2 Ų73.234%0.34338%0.381SS..EExtended strand (participates in β ladder)trans-116.1135.3178.4-61.6174-175.4162-4109.3D51 Y95 K96D51-R105 IonicContact OD2-CZ 3.83Å; D51-R105 IonicContact OD2-NH1 2.71Å; D51-R105 PolarHBondContact OD2-NH1 3.43Å; Y95-R105 CarbonylContact O-C 3.27Å; Y95-R105 WeakPolarHBondContact O-CA 2.99Å; K96-R105 HydrophobicContact CB-CG 4.15Å; K96-R105 HydrophobicContact CG-CG 3.95Å
106W84.2Confident79.8Confident52 Ų5276.1 Ų76.120%0.19740%0.399CS..EExtended strand (participates in β ladder)trans-141.3167.3175.364.898.3000110.3E67 C69 P70 A77 Y95 C97 H104E67-W106 VanDerWaalsContact OE1-CZ2 3.24Å; E67-W106 WeakPolarHBondContact OE1-CZ2 2.9Å; C69-W106 HydrophobicContact CB-CH2 3.77Å; C69-W106 HydrophobicContact CB-CZ3 4.11Å; C69-W106 VanDerWaalsContact SG-CZ3 3.55Å; P70-W106 HydrophobicContact CG-CD2 4.19Å; P70-W106 HydrophobicContact CG-CE3 4.4Å; P70-W106 HydrophobicContact CG-CG 4.44Å; A77-W106 HydrophobicContact CB-CH2 3.67Å; A77-W106 HydrophobicContact CB-CZ2 3.99Å; Y95-W106 AromaticContact CD2-CD1 3.68Å; Y95-W106 AromaticContact CD2-NE1 3.34Å; Y95-W106 VanDerWaalsContact CD2-NE1 3.34Å; Y95-W106 HydrophobicContact CG-CZ2 4.38Å; Y95-W106 AromaticContact CG-NE1 3.72Å; Y95-W106 PolarHBondContact N-O 3.13Å; Y95-W106 PolarHBondContact O-N 3.05Å; C97-W106 HydrophobicContact CB-CH2 4.43Å; C97-W106 HydrophobicContact CB-CZ3 4.05Å; H104-W106 AromaticContact CD2-CE3 3.57Å; H104-W106 VanDerWaalsContact O-CZ3 3.3Å; H104-W106 WeakPolarHBondContact O-CZ3 3.26Å
107R82.1Confident79.4Confident146 Ų14679.5 Ų79.555%0.55142%0.42SS*.EExtended strand (participates in β ladder)trans-121146.1178.6176-170.7-66.6-175.90.9108.2F94F94-R107 HydrophobicContact CD1-CB 4.33Å; F94-R107 HydrophobicContact CE1-CB 4.43Å; F94-R107 HydrophobicContact CE1-CG 4.45Å; F94-R107 VanDerWaalsContact CE1-NE 3.34Å; F94-R107 VanDerWaalsContact CZ-NH2 3.33Å
108D71.9Confident78.8Confident161 Ų16186.5 Ų86.586%0.86146%0.456SS*.  trans-1120161-166.657.1000110.3T93 Y95T93-D108 PolarHBondContact O-N 2.9Å; Y95-D108 HydrophobicContact CD2-CB 4.23Å; Y95-D108 HydrophobicContact CE2-CB 3.52Å

Retrieved 108 of 108 residues in 336.8 ms (Link to these results)