A0A087XY80_POEFO Loading...

Cytochrome b-c1 complex subunit 8

Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The complex plays an important role in the uptake of multiple carbon sources present in different host niches.

AlphaFold DB , UniProt , Accession A0A087XY80, Species POEFO (Poecilia formosa, Amazon molly), Gene n/a, Length 88 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1I47.9Very low62.2Low229 Ų229144.2 Ų144.2100%1.17476%0.761SS**  079.30-57.2165.2000107.5
2S44.4Very low64.2Low122 Ų122139.4 Ų139.485%0.85377%0.772SS**  trans-169.770.1178.3-177.20000111.2
3S48.1Very low66.2Low112 Ų112136.1 Ų136.178%0.78375%0.753SS**  trans-154.819.8175.368.60000116.4
4L54Low67.8Low161 Ų161133.5 Ų133.584%0.84374%0.736SS**  trans-125.523.3-170.2-70.1-178.8000117.1
5V56.6Low69.2Low111 Ų111130.1 Ų130.167%0.67373%0.732SS**  trans-142.680.9171.4-169.60000111
6N55.4Low70.5Confident146 Ų146132.8 Ų132.878%0.78173%0.734SS**  trans-130.173.2155.9-140.511.1000107.3
7M66.2Low71.7Confident150 Ų150131.1 Ų131.174%0.73973%0.728SS**  trans-89.996.6174.9-67.2-172.483.400108.3R9M7-R9 WeakPolarHBondContact O-CG 3.38Å; M7-R9 PolarHBondContact O-N 3.03Å
8G61.6Low73Confident29 Ų29133.7 Ų133.730%0.29973%0.725SS.*  trans35.360.5149.300000118.1D13G8-D13 WeakPolarHBondContact CA-O 3.17Å; G8-D13 WeakPolarHBondContact CA-OD2 3.42Å; G8-D13 PolarHBondContact N-OD2 3.15Å; G8-D13 VanDerWaalsContact N-OD2 3.15Å
9R77.1Confident74.2Confident186 Ų186136.5 Ų136.570%0.70273%0.732SS**  trans-100.6-2.8177.1-61.8-154.1172108.4-1.3114.3M7M7-R9 WeakPolarHBondContact O-CG 3.38Å; M7-R9 PolarHBondContact O-N 3.03Å
10H83.9Confident75.3Confident141 Ų141134.8 Ų134.865%0.65373%0.726SS**SBendtrans-137.3154.6-171.5-59.1-65.4000112.4G12 D13 L14H10-G12 PolarHBondContact O-N 3.1Å; H10-D13 PolarHBondContact O-N 3.3Å; H10-D13 VanDerWaalsContact O-N 3.1Å; H10-L14 WeakPolarHBondContact O-CG 2.95Å
11F89.2Confident76.3Confident199 Ų199134.7 Ų134.787%0.87372%0.724SS**THydrogen-bonded Turntrans-53.1128.3172.9-69.5-67.7000110.4L14F11-L14 HydrophobicContact CD1-CD1 3.69Å; F11-L14 HydrophobicContact CE1-CD1 4.05Å
12G86.3Confident78.7Confident87 Ų87129.4 Ų129.490%0.89770%0.703SS**THydrogen-bonded Turntrans108.8-26.6-173.600000114.5H10H10-G12 PolarHBondContact O-N 3.1Å
13D89.3Confident81.2Confident96 Ų96133.2 Ų133.251%0.51370%0.7SS.*SBendtrans-126.921180-16937.5000112.9G8 H10G8-D13 WeakPolarHBondContact CA-O 3.17Å; G8-D13 WeakPolarHBondContact CA-OD2 3.42Å; G8-D13 PolarHBondContact N-OD2 3.15Å; G8-D13 VanDerWaalsContact N-OD2 3.15Å; H10-D13 PolarHBondContact O-N 3.3Å; H10-D13 VanDerWaalsContact O-N 3.1Å
14L88.6Confident83.5Confident100 Ų100133.4 Ų133.452%0.52470%0.701SS.*SBendtrans-73.2-52.4-173.8-63.9173.6000113.1H10 F11H10-L14 WeakPolarHBondContact O-CG 2.95Å; F11-L14 HydrophobicContact CD1-CD1 3.69Å; F11-L14 HydrophobicContact CE1-CD1 4.05Å
15A88.8Confident85.6Confident82 Ų82131.1 Ų131.168%0.67869%0.689SS**  trans-162.3153.3-173.800000111.1V17A15-V17 HydrophobicContact CB-CG2 4.31Å; A15-V17 PolarHBondContact O-N 3.48Å
16K90.1Very high87.5Confident173 Ų173128.4 Ų128.475%0.75268%0.675SS**  trans-91.698171.8-172.2175.2-177.1175.60109.8
17V91.8Very high89.4Confident105 Ų105126.4 Ų126.464%0.63667%0.67SS**  trans-107.2139175.3-175.90000109.2A15 V20A15-V17 HydrophobicContact CB-CG2 4.31Å; A15-V17 PolarHBondContact O-N 3.48Å; V17-V20 HydrophobicContact CG1-CB 4.16Å; V17-V20 HydrophobicContact CG1-CG2 3.62Å
18R94.6Very high90.9Very high178 Ų178128.8 Ų128.867%0.67268%0.677SS**  trans-130.2139.7178.9-68.9-179.5161.5-176.2-8.6110.1V20R18-V20 PolarHBondContact O-N 3.46Å
19H96.8Very high92.5Very high187 Ų187134.3 Ų134.387%0.86669%0.694SS**SBendtrans59.339.7171.5-44113.2000116.2
20V95.9Very high93.5Very high102 Ų102130.5 Ų130.562%0.61869%0.685SS**  trans-108.2119.8171.4178.80000108.8V17 R18 T22V17-V20 HydrophobicContact CG1-CB 4.16Å; V17-V20 HydrophobicContact CG1-CG2 3.62Å; R18-V20 PolarHBondContact O-N 3.46Å; V20-T22 HydrophobicContact CG1-CG2 4.18Å
21I96.3Very high93.9Very high132 Ų132132 Ų13268%0.67769%0.69SS**  trans-106.7126.4177.2-56.7167.4000108.2Y23I21-Y23 HydrophobicContact CG2-CE1 4.03Å; I21-Y23 HydrophobicContact CG2-CE2 3.94Å
22T97.2Very high94.2Very high118 Ų118127.1 Ų127.172%0.72469%0.686SS**  trans-122133.1179.255.50000110.2V20V20-T22 HydrophobicContact CG1-CG2 4.18Å
23Y97.7Very high94.5Very high203 Ų203131.4 Ų131.480%0.79668%0.68SS**  trans-106.2147.3176.4-55.4-79.3000110.3I21I21-Y23 HydrophobicContact CG2-CE1 4.03Å; I21-Y23 HydrophobicContact CG2-CE2 3.94Å
24S96.3Very high94.6Very high116 Ų116129.7 Ų129.781%0.81168%0.679SS**  trans-148147.3178.1-63.60000109.6
25L97.1Very high94.9Very high113 Ų113129.8 Ų129.859%0.59268%0.68SS**  trans-103.2152.5174.8-68171.2000109.8Q30L25-Q30 HydrophobicContact CB-CG 3.89Å; L25-Q30 PolarHBondContact O-NE2 2.79Å
26S97.1Very high95.1Very high53 Ų53132.4 Ų132.437%0.37167%0.673SS.*  trans-60139.8174.8176.90000110.5F28 E29 Q30S26-F28 PolarHBondContact O-N 3.25Å; S26-F28 VanDerWaalsContact O-N 3.15Å; S26-E29 WeakPolarHBondContact O-CB 3.49Å; S26-E29 PolarHBondContact O-N 3.41Å; S26-Q30 PolarHBondContact O-N 2.95Å
27P96.5Very high95.2Very high104 Ų104131.6 Ų131.668%0.67567%0.67SS**G310 helixtrans-56.2-30.9177.5-26.435.1000113.6E29 Q30P27-E29 PolarHBondContact O-N 3.36Å; P27-Q30 PolarHBondContact O-N 3.15Å
28F96.6Very high95.3Very high201 Ų201130 Ų13088%0.88266%0.664SS**G310 helixtrans-72.8-14.3178.2-58.5-70.7000113.6S26S26-F28 PolarHBondContact O-N 3.25Å; S26-F28 VanDerWaalsContact O-N 3.15Å
29E95.6Very high95.4Very high144 Ų144127.9 Ų127.967%0.67366%0.659SS**G310 helixtrans-97.4-8.9175.3-61.8-176.7153.200112.2S26 P27S26-E29 WeakPolarHBondContact O-CB 3.49Å; S26-E29 PolarHBondContact O-N 3.41Å; P27-E29 PolarHBondContact O-N 3.36Å
30Q97.1Very high95.3Very high106 Ų106120.3 Ų120.350%0.49563%0.632SS.*SBendtrans-102.1155.1-178.2-63.7-175.247.100111.9L25 S26 P27L25-Q30 HydrophobicContact CB-CG 3.89Å; L25-Q30 PolarHBondContact O-NE2 2.79Å; S26-Q30 PolarHBondContact O-N 2.95Å; P27-Q30 PolarHBondContact O-N 3.15Å
31K94.2Very high95.3Very high174 Ų174119.5 Ų119.576%0.75762%0.623SS**  trans-85.3125.3168.8-66.1178.3179.3178.40109.1F33 A34K31-F33 PolarHBondContact O-N 3.25Å; K31-A34 HydrophobicContact CB-CB 4.25Å
32A93.7Very high95.4Very high96 Ų96116.4 Ų116.479%0.79361%0.612SS**THydrogen-bonded Turntrans-56.8-36.8177.300000113
33F92.3Very high95.4Very high177 Ų177114.3 Ų114.378%0.77660%0.596SS**THydrogen-bonded Turntrans-122.464.2178.7-57.9-71.7000111.8K31K31-F33 PolarHBondContact O-N 3.25Å
34A92.7Very high95.4Very high59 Ų59109.3 Ų109.349%0.48859%0.587SS.*THydrogen-bonded Turntrans-68.8140.7174.700000111.9K31 Y36K31-A34 HydrophobicContact CB-CB 4.25Å; A34-Y36 VanDerWaalsContact C-N 3.27Å; A34-Y36 PolarHBondContact O-N 2.8Å; A34-Y36 VanDerWaalsContact O-N 3.16Å
35N94.4Very high95.4Very high103 Ų103111.6 Ų111.655%0.55158%0.578SS**THydrogen-bonded Turntrans55.433.1169.2-58.1-54.8000115.7F37 S38 K39 G40N35-F37 PolarHBondContact O-N 3.16Å; N35-S38 WeakPolarHBondContact CB-OG 3.49Å; N35-S38 PolarHBondContact OD1-OG 3.12Å; N35-K39 HydrophobicContact CB-CB 3.86Å; N35-K39 HydrophobicContact CB-CG 3.83Å; N35-K39 WeakPolarHBondContact O-CA 3.25Å; N35-K39 PolarHBondContact O-N 3.49Å; N35-G40 PolarHBondContact O-N 3.21Å
36Y92.2Very high95.5Very high137 Ų137113.2 Ų113.254%0.53758%0.576SS.*Iπ-helixtrans-54.6-52.4-175.9-176.6-98.4000113.1A34 G40 I41A34-Y36 VanDerWaalsContact C-N 3.27Å; A34-Y36 PolarHBondContact O-N 2.8Å; A34-Y36 VanDerWaalsContact O-N 3.16Å; Y36-G40 CarbonylContact O-C 3.52Å; Y36-G40 WeakPolarHBondContact O-CA 3.47Å; Y36-G40 PolarHBondContact O-N 3Å; Y36-I41 HydrophobicContact CE1-CD1 4.32Å; Y36-I41 HydrophobicContact CE1-CG1 4.45Å; Y36-I41 PolarHBondContact O-N 2.73Å
37F94.3Very high95.5Very high156 Ų156119 Ų11968%0.68459%0.589SS**Iπ-helixtrans-79.7-40.9-179.5-61.5-78000113N35 I41 P42N35-F37 PolarHBondContact O-N 3.16Å; F37-I41 HydrophobicContact CD1-CD1 3.54Å; F37-I41 HydrophobicContact CE1-CD1 4.11Å; F37-I41 HydrophobicContact CG-CD1 4.46Å; F37-P42 VanDerWaalsContact O-CD 3.27Å; F37-P42 WeakPolarHBondContact O-CD 3.28Å
38S93.8Very high95.5Very high72 Ų72119 Ų11950%0.50358%0.579SS.*Iπ-helixtrans-76-29.5-173.758.70000113.8N35N35-S38 WeakPolarHBondContact CB-OG 3.49Å; N35-S38 PolarHBondContact OD1-OG 3.12Å
39K95Very high95.6Very high133 Ų133112 Ų11258%0.57855%0.552SS**Iπ-helixtrans-127.9-36-177.9-61.2-66.4-178-177.80113N35 N43N35-K39 HydrophobicContact CB-CB 3.86Å; N35-K39 HydrophobicContact CB-CG 3.83Å; N35-K39 WeakPolarHBondContact O-CA 3.25Å; N35-K39 PolarHBondContact O-N 3.49Å; K39-N43 VanDerWaalsContact O-CB 3.28Å; K39-N43 WeakPolarHBondContact O-CB 3.43Å; K39-N43 PolarHBondContact O-N 2.98Å; K39-N43 VanDerWaalsContact O-N 3.15Å; K39-N43 PolarHBondContact O-ND2 2.78Å
40G95.4Very high95.6Very high28 Ų28107.9 Ų107.929%0.28954%0.544SS..Iπ-helixtrans-61.4-62.6-179.400000111.9N35 Y36 N43 V44N35-G40 PolarHBondContact O-N 3.21Å; Y36-G40 CarbonylContact O-C 3.52Å; Y36-G40 WeakPolarHBondContact O-CA 3.47Å; Y36-G40 PolarHBondContact O-N 3Å; G40-N43 PolarHBondContact O-N 3.4Å; G40-N43 VanDerWaalsContact O-N 3.14Å; G40-V44 WeakPolarHBondContact O-CG2 3.1Å; G40-V44 PolarHBondContact O-N 3.22Å
41I96.4Very high95.6Very high84 Ų84105.9 Ų105.943%0.43154%0.541SS..Hα-helixtrans-58.1-48.5-178.2-63.2174.2000112.4Y36 F37 N43 V44 W45Y36-I41 HydrophobicContact CE1-CD1 4.32Å; Y36-I41 HydrophobicContact CE1-CG1 4.45Å; Y36-I41 PolarHBondContact O-N 2.73Å; F37-I41 HydrophobicContact CD1-CD1 3.54Å; F37-I41 HydrophobicContact CE1-CD1 4.11Å; F37-I41 HydrophobicContact CG-CD1 4.46Å; I41-N43 VanDerWaalsContact C-N 3.28Å; I41-N43 PolarHBondContact O-N 3.25Å; I41-V44 PolarHBondContact O-N 3.17Å; I41-V44 VanDerWaalsContact O-N 3.14Å; I41-W45 PolarHBondContact O-N 3.31Å
42P97.3Very high95.8Very high68 Ų68101.6 Ų101.644%0.44252%0.522SS..Hα-helixtrans-59.2-36.5176.9-28.337.1000113.7F37 W45 R46F37-P42 VanDerWaalsContact O-CD 3.27Å; F37-P42 WeakPolarHBondContact O-CD 3.28Å; P42-W45 PolarHBondContact O-N 2.85Å; P42-R46 WeakPolarHBondContact O-CB 3.25Å; P42-R46 PolarHBondContact O-N 3.02Å
43N96.9Very high95.9Very high73 Ų73104.5 Ų104.539%0.3952%0.518SS..Hα-helixtrans-71.6-36.7176.2-83.7-58.4000112.7K39 G40 I41 W45 R46 R47K39-N43 VanDerWaalsContact O-CB 3.28Å; K39-N43 WeakPolarHBondContact O-CB 3.43Å; K39-N43 PolarHBondContact O-N 2.98Å; K39-N43 VanDerWaalsContact O-N 3.15Å; K39-N43 PolarHBondContact O-ND2 2.78Å; G40-N43 PolarHBondContact O-N 3.4Å; G40-N43 VanDerWaalsContact O-N 3.14Å; I41-N43 VanDerWaalsContact C-N 3.28Å; I41-N43 PolarHBondContact O-N 3.25Å; N43-W45 VanDerWaalsContact C-N 3.35Å; N43-R46 PolarHBondContact O-N 3.45Å; N43-R47 WeakPolarHBondContact O-CB 3.39Å; N43-R47 VanDerWaalsContact O-CG 3.25Å; N43-R47 WeakPolarHBondContact O-CG 3.33Å; N43-R47 PolarHBondContact O-N 3.23Å
44V97.5Very high96.1Very high99 Ų99104.1 Ų104.160%0.652%0.516SS*.Hα-helixtrans-61.3-47.1172.9173.50000110G40 I41 R46 R47 F48G40-V44 WeakPolarHBondContact O-CG2 3.1Å; G40-V44 PolarHBondContact O-N 3.22Å; I41-V44 PolarHBondContact O-N 3.17Å; I41-V44 VanDerWaalsContact O-N 3.14Å; V44-R46 PolarHBondContact O-N 3.3Å; V44-R47 PolarHBondContact O-N 3.18Å; V44-F48 WeakPolarHBondContact O-CB 3.39Å; V44-F48 PolarHBondContact O-N 2.91Å
45W97.8Very high96.3Very high164 Ų164105.5 Ų105.562%0.62152%0.518SS*.Hα-helixtrans-58.4-48.6176.4-178.4-113.3000112I41 P42 N43 R47 F48 T49I41-W45 PolarHBondContact O-N 3.31Å; P42-W45 PolarHBondContact O-N 2.85Å; N43-W45 VanDerWaalsContact C-N 3.35Å; W45-R47 VanDerWaalsContact C-N 3.29Å; W45-R47 PolarHBondContact O-N 3.15Å; W45-F48 HydrophobicContact CE3-CD1 4.02Å; W45-F48 HydrophobicContact CH2-CD1 4.39Å; W45-F48 HydrophobicContact CH2-CE1 4.41Å; W45-F48 AromaticContact CZ3-CD1 3.76Å; W45-F48 HydrophobicContact CZ3-CD1 3.76Å; W45-F48 AromaticContact CZ3-CE1 3.98Å; W45-F48 HydrophobicContact CZ3-CE1 3.98Å; W45-F48 WeakPolarHBondContact O-CB 3.44Å; W45-F48 PolarHBondContact O-N 3.25Å; W45-T49 HydrophobicContact CD2-CG2 3.95Å; W45-T49 HydrophobicContact CE3-CG2 4.47Å; W45-T49 HydrophobicContact CG-CG2 4.42Å; W45-T49 HydrophobicContact CH2-CG2 4.24Å; W45-T49 HydrophobicContact CZ2-CG2 3.68Å; W45-T49 WeakPolarHBondContact O-CG2 3.26Å; W45-T49 PolarHBondContact O-N 3.17Å; W45-T49 PolarHBondContact O-OG1 2.95Å
46R97.7Very high96.5Very high146 Ų146101.3 Ų101.355%0.55150%0.498SS*.Hα-helixtrans-57.5-39.3175.9-171.5-168.964.473.9-1.8112.7P42 N43 V44 T49 A50P42-R46 WeakPolarHBondContact O-CB 3.25Å; P42-R46 PolarHBondContact O-N 3.02Å; N43-R46 PolarHBondContact O-N 3.45Å; V44-R46 PolarHBondContact O-N 3.3Å; R46-T49 PolarHBondContact O-OG1 3.18Å; R46-A50 WeakPolarHBondContact O-CB 3.23Å; R46-A50 PolarHBondContact O-N 3.44Å
47R97.2Very high96.8Very high174 Ų17497.9 Ų97.966%0.65749%0.492SS*.Hα-helixtrans-70.4-40177.5-7317671.9178.53111.9N43 V44 W45 S51N43-R47 WeakPolarHBondContact O-CB 3.39Å; N43-R47 VanDerWaalsContact O-CG 3.25Å; N43-R47 WeakPolarHBondContact O-CG 3.33Å; N43-R47 PolarHBondContact O-N 3.23Å; V44-R47 PolarHBondContact O-N 3.18Å; W45-R47 VanDerWaalsContact C-N 3.29Å; W45-R47 PolarHBondContact O-N 3.15Å; R47-S51 PolarHBondContact O-N 2.95Å; R47-S51 PolarHBondContact O-OG 3.5Å; R47-S51 VanDerWaalsContact O-OG 3.12Å
48F98Very high96.9Very high106 Ų10693.7 Ų93.747%0.46548%0.481SS..Hα-helixtrans-62.2-53.8176.5173.5-99.6000110.9V44 W45 A50 S51 F52V44-F48 WeakPolarHBondContact O-CB 3.39Å; V44-F48 PolarHBondContact O-N 2.91Å; W45-F48 HydrophobicContact CE3-CD1 4.02Å; W45-F48 HydrophobicContact CH2-CD1 4.39Å; W45-F48 HydrophobicContact CH2-CE1 4.41Å; W45-F48 AromaticContact CZ3-CD1 3.76Å; W45-F48 HydrophobicContact CZ3-CD1 3.76Å; W45-F48 AromaticContact CZ3-CE1 3.98Å; W45-F48 HydrophobicContact CZ3-CE1 3.98Å; W45-F48 WeakPolarHBondContact O-CB 3.44Å; W45-F48 PolarHBondContact O-N 3.25Å; F48-A50 VanDerWaalsContact C-N 3.29Å; F48-A50 PolarHBondContact O-N 3.31Å; F48-S51 PolarHBondContact O-N 3.46Å; F48-F52 HydrophobicContact CE1-CB 4.39Å; F48-F52 AromaticContact CE1-CD2 3.79Å; F48-F52 HydrophobicContact CE1-CD2 3.79Å; F48-F52 HydrophobicContact CE1-CE2 4.43Å; F48-F52 HydrophobicContact CE1-CG 4.29Å; F48-F52 HydrophobicContact CE2-CD2 4.03Å; F48-F52 AromaticContact CZ-CD2 3.35Å; F48-F52 HydrophobicContact CZ-CD2 3.35Å; F48-F52 AromaticContact CZ-CE2 3.88Å; F48-F52 HydrophobicContact CZ-CE2 3.88Å; F48-F52 HydrophobicContact CZ-CG 4.25Å; F48-F52 WeakPolarHBondContact O-CB 3.15Å; F48-F52 PolarHBondContact O-N 2.93Å
49T97.1Very high97.1Very high52 Ų5296.5 Ų96.532%0.31949%0.487SS..Hα-helixtrans-61.9-36.2-178.155.80000112.6W45 R46 S51W45-T49 HydrophobicContact CD2-CG2 3.95Å; W45-T49 HydrophobicContact CE3-CG2 4.47Å; W45-T49 HydrophobicContact CG-CG2 4.42Å; W45-T49 HydrophobicContact CH2-CG2 4.24Å; W45-T49 HydrophobicContact CZ2-CG2 3.68Å; W45-T49 WeakPolarHBondContact O-CG2 3.26Å; W45-T49 PolarHBondContact O-N 3.17Å; W45-T49 PolarHBondContact O-OG1 2.95Å; R46-T49 PolarHBondContact O-OG1 3.18Å; T49-S51 PolarHBondContact O-N 2.87Å
50A97.4Very high97.3Very high59 Ų5994.7 Ų94.749%0.48848%0.483SS..Hα-helixtrans-64-23.2175.900000114.2R46 F48R46-A50 WeakPolarHBondContact O-CB 3.23Å; R46-A50 PolarHBondContact O-N 3.44Å; F48-A50 VanDerWaalsContact C-N 3.29Å; F48-A50 PolarHBondContact O-N 3.31Å
51S96.6Very high97.4Very high63 Ų6398.3 Ų98.344%0.44150%0.495SS..Hα-helixtrans-106.5-23.6-177.9-50.10000112.7R47 F48 T49 F53 K54 V55R47-S51 PolarHBondContact O-N 2.95Å; R47-S51 PolarHBondContact O-OG 3.5Å; R47-S51 VanDerWaalsContact O-OG 3.12Å; F48-S51 PolarHBondContact O-N 3.46Å; T49-S51 PolarHBondContact O-N 2.87Å; S51-F53 PolarHBondContact O-N 3.14Å; S51-K54 WeakPolarHBondContact O-CB 3.49Å; S51-K54 PolarHBondContact O-N 2.95Å; S51-V55 PolarHBondContact O-N 3.14Å
52F97.3Very high97.5Very high84 Ų8498.7 Ų98.737%0.36850%0.502SS..Hα-helixtrans-53-50.9-173-177.2-98.9000112.6F48 K54 V55 A56F48-F52 HydrophobicContact CE1-CB 4.39Å; F48-F52 AromaticContact CE1-CD2 3.79Å; F48-F52 HydrophobicContact CE1-CD2 3.79Å; F48-F52 HydrophobicContact CE1-CE2 4.43Å; F48-F52 HydrophobicContact CE1-CG 4.29Å; F48-F52 HydrophobicContact CE2-CD2 4.03Å; F48-F52 AromaticContact CZ-CD2 3.35Å; F48-F52 HydrophobicContact CZ-CD2 3.35Å; F48-F52 AromaticContact CZ-CE2 3.88Å; F48-F52 HydrophobicContact CZ-CE2 3.88Å; F48-F52 HydrophobicContact CZ-CG 4.25Å; F48-F52 WeakPolarHBondContact O-CB 3.15Å; F48-F52 PolarHBondContact O-N 2.93Å; F52-K54 PolarHBondContact O-N 3.28Å; F52-V55 PolarHBondContact O-N 3.15Å; F52-A56 HydrophobicContact CD1-CB 4.24Å; F52-A56 HydrophobicContact CD2-CB 4.04Å; F52-A56 HydrophobicContact CE1-CB 3.97Å; F52-A56 HydrophobicContact CE2-CB 3.78Å; F52-A56 HydrophobicContact CG-CB 4.27Å; F52-A56 HydrophobicContact CZ-CB 3.74Å; F52-A56 WeakPolarHBondContact O-CB 3.45Å; F52-A56 PolarHBondContact O-N 3.01Å
53F96.1Very high97.6Very high158 Ų158102.8 Ų102.869%0.69351%0.509SS*.Hα-helixtrans-72.1-11.5-178.5-66.3-72.4000114.7S51 P57S51-F53 PolarHBondContact O-N 3.14Å; F53-P57 VanDerWaalsContact O-CD 3.25Å; F53-P57 WeakPolarHBondContact O-CD 3.43Å; F53-P57 VanDerWaalsContact O-CG 3.26Å; F53-P57 WeakPolarHBondContact O-CG 3.33Å
54K96.9Very high97.7Very high169 Ų169104 Ų10474%0.73552%0.515SS*.Hα-helixtrans-87-33.3173.5-62.9177.3-178.5173.20111.5S51 F52S51-K54 WeakPolarHBondContact O-CB 3.49Å; S51-K54 PolarHBondContact O-N 2.95Å; F52-K54 PolarHBondContact O-N 3.28Å
55V97.7Very high97.7Very high88 Ų88104.2 Ų104.253%0.53351%0.512SS..Hα-helixtrans-100.9-42.1-172.6-178.40000112.3S51 F52 P58 M59S51-V55 PolarHBondContact O-N 3.14Å; F52-V55 PolarHBondContact O-N 3.15Å; V55-P58 WeakPolarHBondContact O-CD 3.27Å; V55-P58 WeakPolarHBondContact O-CG 3.45Å; V55-M59 HydrophobicContact CG1-CG 4.32Å; V55-M59 VanDerWaalsContact O-CG 3.23Å; V55-M59 WeakPolarHBondContact O-CG 3.4Å
56A98Very high97.7Very high15 Ų15103.6 Ų103.612%0.12451%0.51CS..Hα-helixtrans-65.7-43.1-173.100000113.8F52 M59 I60F52-A56 HydrophobicContact CD1-CB 4.24Å; F52-A56 HydrophobicContact CD2-CB 4.04Å; F52-A56 HydrophobicContact CE1-CB 3.97Å; F52-A56 HydrophobicContact CE2-CB 3.78Å; F52-A56 HydrophobicContact CG-CB 4.27Å; F52-A56 HydrophobicContact CZ-CB 3.74Å; F52-A56 WeakPolarHBondContact O-CB 3.45Å; F52-A56 PolarHBondContact O-N 3.01Å; A56-M59 PolarHBondContact O-N 2.96Å; A56-I60 HydrophobicContact CB-CD1 4.21Å; A56-I60 WeakPolarHBondContact O-CB 3.49Å; A56-I60 VanDerWaalsContact O-CG1 3.25Å; A56-I60 WeakPolarHBondContact O-CG1 3.35Å; A56-I60 PolarHBondContact O-N 3.4Å
57P97.9Very high97.8Very high64 Ų6499 Ų9942%0.41650%0.501SS..Hα-helixtrans-58.3-50.7-176.9-2636.1000115.2F53 M59 I60 L61F53-P57 VanDerWaalsContact O-CD 3.25Å; F53-P57 WeakPolarHBondContact O-CD 3.43Å; F53-P57 VanDerWaalsContact O-CG 3.26Å; F53-P57 WeakPolarHBondContact O-CG 3.33Å; P57-M59 VanDerWaalsContact C-N 3.31Å; P57-M59 PolarHBondContact O-N 2.89Å; P57-I60 PolarHBondContact O-N 3.37Å; P57-L61 WeakPolarHBondContact O-CB 3.49Å; P57-L61 PolarHBondContact O-N 3.4Å
58P97.8Very high97.8Very high69 Ų6998.9 Ų98.945%0.44850%0.501SS..Hα-helixtrans-65.7-33.9178.125.3-34000112.6V55 T62V55-P58 WeakPolarHBondContact O-CD 3.27Å; V55-P58 WeakPolarHBondContact O-CG 3.45Å; P58-T62 WeakPolarHBondContact O-CB 3.25Å; P58-T62 PolarHBondContact O-N 3.04Å; P58-T62 PolarHBondContact O-OG1 3.38Å
59M98.1Very high97.8Very high131 Ų13195.2 Ų95.265%0.64549%0.492SS*.Hα-helixtrans-64.5-46.6176.2-69.5-66.6-67.300111.9V55 A56 P57 T62 Y63V55-M59 HydrophobicContact CG1-CG 4.32Å; V55-M59 VanDerWaalsContact O-CG 3.23Å; V55-M59 WeakPolarHBondContact O-CG 3.4Å; A56-M59 PolarHBondContact O-N 2.96Å; P57-M59 VanDerWaalsContact C-N 3.31Å; P57-M59 PolarHBondContact O-N 2.89Å; M59-T62 PolarHBondContact O-N 2.97Å; M59-Y63 PolarHBondContact O-N 2.88Å
60I98.3Very high97.9Very high95 Ų9596.2 Ų96.249%0.48750%0.496SS..Hα-helixtrans-62.9-46.9177.5-67.5164.5000109.8A56 P57 T62 Y63 L64A56-I60 HydrophobicContact CB-CD1 4.21Å; A56-I60 WeakPolarHBondContact O-CB 3.49Å; A56-I60 VanDerWaalsContact O-CG1 3.25Å; A56-I60 WeakPolarHBondContact O-CG1 3.35Å; A56-I60 PolarHBondContact O-N 3.4Å; P57-I60 PolarHBondContact O-N 3.37Å; I60-T62 VanDerWaalsContact C-N 3.3Å; I60-T62 PolarHBondContact O-N 2.95Å; I60-Y63 WeakPolarHBondContact O-CB 3.36Å; I60-Y63 PolarHBondContact O-N 3.01Å; I60-Y63 VanDerWaalsContact O-N 3.17Å; I60-L64 HydrophobicContact CG2-CD1 4.13Å; I60-L64 HydrophobicContact CG2-CG 4.37Å; I60-L64 WeakPolarHBondContact O-CG 3.4Å; I60-L64 PolarHBondContact O-N 3.36Å
61L98.4Very high97.9Very high103 Ų10398.6 Ų98.654%0.53950%0.498SS..Hα-helixtrans-58-44.7179.1-178.761.9000111.7P57 Y63 L64 I65P57-L61 WeakPolarHBondContact O-CB 3.49Å; P57-L61 PolarHBondContact O-N 3.4Å; L61-Y63 VanDerWaalsContact C-N 3.33Å; L61-Y63 PolarHBondContact O-N 3.25Å; L61-L64 PolarHBondContact O-N 3.44Å; L61-I65 HydrophobicContact CD1-CD1 4.27Å; L61-I65 HydrophobicContact CG-CD1 4.04Å; L61-I65 WeakPolarHBondContact O-CG1 3.19Å; L61-I65 PolarHBondContact O-N 3.34Å
62T98.4Very high97.9Very high93 Ų9398.4 Ų98.457%0.57149%0.494SS*.Hα-helixtrans-61.2-43.5177.9-570000111.3P58 M59 I60 L64 I65 Y66P58-T62 WeakPolarHBondContact O-CB 3.25Å; P58-T62 PolarHBondContact O-N 3.04Å; P58-T62 PolarHBondContact O-OG1 3.38Å; M59-T62 PolarHBondContact O-N 2.97Å; I60-T62 VanDerWaalsContact C-N 3.3Å; I60-T62 PolarHBondContact O-N 2.95Å; T62-L64 VanDerWaalsContact C-N 3.35Å; T62-L64 PolarHBondContact O-N 3.17Å; T62-I65 PolarHBondContact O-N 3.49Å; T62-Y66 WeakPolarHBondContact O-CB 3.39Å; T62-Y66 PolarHBondContact O-N 2.96Å
63Y98.4Very high97.9Very high153 Ų15399.6 Ų99.660%0.650%0.501SS*.Hα-helixtrans-62.9-40.3177.2178.2-104.4000112.6M59 I60 L61 Y66 S67M59-Y63 PolarHBondContact O-N 2.88Å; I60-Y63 WeakPolarHBondContact O-CB 3.36Å; I60-Y63 PolarHBondContact O-N 3.01Å; I60-Y63 VanDerWaalsContact O-N 3.17Å; L61-Y63 VanDerWaalsContact C-N 3.33Å; L61-Y63 PolarHBondContact O-N 3.25Å; Y63-Y66 PolarHBondContact O-N 3.34Å; Y63-S67 WeakPolarHBondContact O-CB 3.49Å; Y63-S67 PolarHBondContact O-N 2.94Å
64L98.6Very high98Very high100 Ų10096.8 Ų96.852%0.52449%0.49SS..Hα-helixtrans-63.3-46.2176.2-67.2175.5000111.6I60 L61 T62 Y66 S67 W68I60-L64 HydrophobicContact CG2-CD1 4.13Å; I60-L64 HydrophobicContact CG2-CG 4.37Å; I60-L64 WeakPolarHBondContact O-CG 3.4Å; I60-L64 PolarHBondContact O-N 3.36Å; L61-L64 PolarHBondContact O-N 3.44Å; T62-L64 VanDerWaalsContact C-N 3.35Å; T62-L64 PolarHBondContact O-N 3.17Å; L64-Y66 VanDerWaalsContact C-N 3.33Å; L64-Y66 PolarHBondContact O-N 3.43Å; L64-S67 PolarHBondContact O-N 3.46Å; L64-W68 WeakPolarHBondContact O-CB 3.46Å; L64-W68 PolarHBondContact O-N 3.49Å
65I98.4Very high97.8Very high102 Ų10294.1 Ų94.152%0.52348%0.48SS..Hα-helixtrans-60.8-44.2177.3-67166.6000110.6L61 T62 W68 G69L61-I65 HydrophobicContact CD1-CD1 4.27Å; L61-I65 HydrophobicContact CG-CD1 4.04Å; L61-I65 WeakPolarHBondContact O-CG1 3.19Å; L61-I65 PolarHBondContact O-N 3.34Å; T62-I65 PolarHBondContact O-N 3.49Å; I65-W68 PolarHBondContact O-N 3.09Å; I65-G69 PolarHBondContact O-N 2.94Å
66Y98.4Very high97.6Very high151 Ų15193.1 Ų93.159%0.59249%0.488SS*.Hα-helixtrans-59.3-49.2177169.9-100.9000112.2T62 Y63 L64 G69 N70T62-Y66 WeakPolarHBondContact O-CB 3.39Å; T62-Y66 PolarHBondContact O-N 2.96Å; Y63-Y66 PolarHBondContact O-N 3.34Å; L64-Y66 VanDerWaalsContact C-N 3.33Å; L64-Y66 PolarHBondContact O-N 3.43Å; Y66-G69 PolarHBondContact O-N 3.38Å; Y66-N70 WeakPolarHBondContact CE1-ND2 3Å; Y66-N70 WeakPolarHBondContact CE2-ND2 3.22Å; Y66-N70 PolarHBondContact O-N 3.47Å; Y66-N70 VanDerWaalsContact O-N 3.09Å; Y66-N70 PolarHBondContact O-ND2 3.41Å; Y66-N70 PolarHBondContact OH-ND2 2.98Å
67S98.3Very high97.4Very high50 Ų5098.2 Ų98.235%0.3551%0.507SS..Hα-helixtrans-63.1-45.9-179.9-175.10000111.8Y63 L64 N70 M71Y63-S67 WeakPolarHBondContact O-CB 3.49Å; Y63-S67 PolarHBondContact O-N 2.94Å; L64-S67 PolarHBondContact O-N 3.46Å; S67-N70 PolarHBondContact O-N 3.04Å; S67-M71 WeakPolarHBondContact O-CB 3.41Å; S67-M71 PolarHBondContact O-N 3.34Å
68W98.3Very high97.2Very high172 Ų172102.6 Ų102.665%0.65252%0.52SS*.Hα-helixtrans-60.9-48.7176.4173.179.3000111.8L64 I65 N70 M71 T72L64-W68 WeakPolarHBondContact O-CB 3.46Å; L64-W68 PolarHBondContact O-N 3.49Å; I65-W68 PolarHBondContact O-N 3.09Å; W68-N70 VanDerWaalsContact C-N 3.32Å; W68-N70 PolarHBondContact O-N 2.79Å; W68-M71 PolarHBondContact O-N 3.34Å; W68-M71 VanDerWaalsContact O-N 3.12Å; W68-T72 PolarHBondContact NE1-OG1 3.36Å; W68-T72 PolarHBondContact O-N 3.35Å; W68-T72 PolarHBondContact O-OG1 3.42Å
69G98.2Very high96.8Very high28 Ų28107.2 Ų107.229%0.28953%0.533SS..Hα-helixtrans-58.5-43.4-178.900000112.3I65 Y66 H73I65-G69 PolarHBondContact O-N 2.94Å; Y66-G69 PolarHBondContact O-N 3.38Å; G69-H73 WeakPolarHBondContact O-CB 3.45Å; G69-H73 PolarHBondContact O-N 2.86Å
70N98Very high96.4Very high73 Ų73104.7 Ų104.739%0.3952%0.522SS..Hα-helixtrans-64.6-44175.6-71.3-22.8000112.2Y66 S67 W68 H73 E74Y66-N70 WeakPolarHBondContact CE1-ND2 3Å; Y66-N70 WeakPolarHBondContact CE2-ND2 3.22Å; Y66-N70 PolarHBondContact O-N 3.47Å; Y66-N70 VanDerWaalsContact O-N 3.09Å; Y66-N70 PolarHBondContact O-ND2 3.41Å; Y66-N70 PolarHBondContact OH-ND2 2.98Å; S67-N70 PolarHBondContact O-N 3.04Å; W68-N70 VanDerWaalsContact C-N 3.32Å; W68-N70 PolarHBondContact O-N 2.79Å; N70-H73 PolarHBondContact O-N 2.93Å; N70-E74 WeakPolarHBondContact O-CG 3.48Å; N70-E74 PolarHBondContact O-N 3.41Å
71M97.8Very high95.9Very high110 Ų110105.4 Ų105.454%0.54253%0.533SS..Hα-helixtrans-63.6-46.7179.7-174179.9-62.400111.8S67 W68 E74 Q75S67-M71 WeakPolarHBondContact O-CB 3.41Å; S67-M71 PolarHBondContact O-N 3.34Å; W68-M71 PolarHBondContact O-N 3.34Å; W68-M71 VanDerWaalsContact O-N 3.12Å; M71-E74 PolarHBondContact O-N 3.38Å; M71-Q75 WeakPolarHBondContact O-CB 3.35Å; M71-Q75 VanDerWaalsContact O-CG 3.26Å; M71-Q75 WeakPolarHBondContact O-CG 3.26Å; M71-Q75 PolarHBondContact O-N 3.22Å
72T97.3Very high95.5Very high58 Ų58103.8 Ų103.836%0.35653%0.534SS..Hα-helixtrans-66-39178.2-60.30000111.5W68 Q75 G76W68-T72 PolarHBondContact NE1-OG1 3.36Å; W68-T72 PolarHBondContact O-N 3.35Å; W68-T72 PolarHBondContact O-OG1 3.42Å; T72-Q75 PolarHBondContact O-N 2.86Å; T72-G76 PolarHBondContact O-N 3.05Å
73H97Very high94.9Very high110 Ų110104.5 Ų104.551%0.50953%0.534SS..Hα-helixtrans-62.2-45.2175.9-177.663.4000112G69 N70 G76 K77G69-H73 WeakPolarHBondContact O-CB 3.45Å; G69-H73 PolarHBondContact O-N 2.86Å; N70-H73 PolarHBondContact O-N 2.93Å; H73-G76 PolarHBondContact O-N 2.93Å; H73-K77 PolarHBondContact CD2-NZ 3Å; H73-K77 VanDerWaalsContact CD2-NZ 3.34Å; H73-K77 WeakPolarHBondContact NE2-CE 3.44Å; H73-K77 PolarHBondContact NE2-NZ 3.03Å; H73-K77 PolarHBondContact O-N 3.5Å
74E96.8Very high94.3Very high98 Ų98103 Ų10346%0.45853%0.528SS..Hα-helixtrans-68.6-35177-71.5-56124.900112.8N70 M71 K77N70-E74 WeakPolarHBondContact O-CG 3.48Å; N70-E74 PolarHBondContact O-N 3.41Å; M71-E74 PolarHBondContact O-N 3.38Å; E74-K77 PolarHBondContact O-N 3.24Å; E74-K77 IonicContact OE1-NZ 2.79Å; E74-K77 PolarHBondContact OE1-NZ 3.28Å
75Q94.6Very high93.5Very high113 Ų113101.7 Ų101.753%0.52853%0.532SS..Hα-helixtrans-64.8-43171.9-74.6170.4-5.400111.8M71 T72 K77 K78M71-Q75 WeakPolarHBondContact O-CB 3.35Å; M71-Q75 VanDerWaalsContact O-CG 3.26Å; M71-Q75 WeakPolarHBondContact O-CG 3.26Å; M71-Q75 PolarHBondContact O-N 3.22Å; T72-Q75 PolarHBondContact O-N 2.86Å; Q75-K77 PolarHBondContact O-N 2.88Å; Q75-K78 WeakPolarHBondContact O-CB 3.42Å; Q75-K78 PolarHBondContact O-N 3.12Å
76G93.4Very high92.8Very high68 Ų68104.5 Ų104.570%0.70155%0.548SS*.Hα-helixtrans-66.3-20.6179.700000114.4T72 H73 K78T72-G76 PolarHBondContact O-N 3.05Å; H73-G76 PolarHBondContact O-N 2.93Å; G76-K78 VanDerWaalsContact C-N 3.33Å
77K94.1Very high91.5Very high122 Ų122103.4 Ų103.453%0.5355%0.552SS.*THydrogen-bonded Turntrans-76.7-20171.8-72.1175.9-173.9162.40113.3H73 E74 Q75H73-K77 PolarHBondContact CD2-NZ 3Å; H73-K77 VanDerWaalsContact CD2-NZ 3.34Å; H73-K77 WeakPolarHBondContact NE2-CE 3.44Å; H73-K77 PolarHBondContact NE2-NZ 3.03Å; H73-K77 PolarHBondContact O-N 3.5Å; E74-K77 PolarHBondContact O-N 3.24Å; E74-K77 IonicContact OE1-NZ 2.79Å; E74-K77 PolarHBondContact OE1-NZ 3.28Å; Q75-K77 PolarHBondContact O-N 2.88Å
78K92.5Very high89.8Confident156 Ų156113.7 Ų113.768%0.67860%0.595SS**SBendtrans-77.8134.4-178.4-63.4179.8-175.9-176.90109.2Q75 G76Q75-K78 WeakPolarHBondContact O-CB 3.42Å; Q75-K78 PolarHBondContact O-N 3.12Å; G76-K78 VanDerWaalsContact C-N 3.33Å
79K90Very high89.4Confident166 Ų166110.8 Ų110.872%0.72259%0.592SS**PPolyproline II helixtrans-62.7135.4173.2-63.9-173.3-179.7-174.20109.6P81 Y84K79-P81 WeakPolarHBondContact O-CD 3.43Å; K79-Y84 HydrophobicContact CB-CE2 4.08Å; K79-Y84 HydrophobicContact CD-CE2 4.37Å
80N90.1Very high88.9Confident78 Ų78115.1 Ų115.142%0.41761%0.608SS.*PPolyproline II helixtrans-84.4117.2172.9177.923.9000109.4A82 D83 Y84N80-A82 PolarHBondContact O-N 2.81Å; N80-A82 PolarHBondContact OD1-N 3.4Å; N80-D83 WeakPolarHBondContact CB-OD2 3.4Å; N80-D83 PolarHBondContact ND2-OD1 3.15Å; N80-D83 PolarHBondContact O-N 3.36Å; N80-D83 VanDerWaalsContact O-N 3.15Å; N80-Y84 WeakPolarHBondContact O-CD2 3.42Å; N80-Y84 WeakPolarHBondContact O-CE2 3.46Å
81P87.6Confident88.4Confident110 Ų110117.4 Ų117.471%0.71462%0.62SS**G310 helixtrans-60.1-27.4-179.9-24.134.8000113.7K79 D83 Y84K79-P81 WeakPolarHBondContact O-CD 3.43Å; P81-D83 PolarHBondContact O-N 3.35Å; P81-Y84 PolarHBondContact O-N 3.36Å
82A88.8Confident87.9Confident68 Ų68117.9 Ų117.956%0.56263%0.625SS**G310 helixtrans-68.7-21.718000000113.3N80 Y84 A85N80-A82 PolarHBondContact O-N 2.81Å; N80-A82 PolarHBondContact OD1-N 3.4Å; A82-Y84 PolarHBondContact O-N 3.18Å; A82-A85 PolarHBondContact O-N 3.44Å
83D85.7Confident87.3Confident108 Ų108121.6 Ų121.658%0.57864%0.641SS**G310 helixtrans-73.3-19.2-180-62.1-9.5000112.1N80 P81N80-D83 WeakPolarHBondContact CB-OD2 3.4Å; N80-D83 PolarHBondContact ND2-OD1 3.15Å; N80-D83 PolarHBondContact O-N 3.36Å; N80-D83 VanDerWaalsContact O-N 3.15Å; P81-D83 PolarHBondContact O-N 3.35Å
84Y85.6Confident86.7Confident122 Ų122122.4 Ų122.448%0.47865%0.65SS.*G310 helixtrans-1087.8-179.1-49.2-75000113K79 N80 P81 A82 N86K79-Y84 HydrophobicContact CB-CE2 4.08Å; K79-Y84 HydrophobicContact CD-CE2 4.37Å; N80-Y84 WeakPolarHBondContact O-CD2 3.42Å; N80-Y84 WeakPolarHBondContact O-CE2 3.46Å; P81-Y84 PolarHBondContact O-N 3.36Å; A82-Y84 PolarHBondContact O-N 3.18Å; Y84-N86 VanDerWaalsContact C-N 3.32Å; Y84-N86 PolarHBondContact O-N 3.5Å
85A83.2Confident85.9Confident73 Ų73124.1 Ų124.160%0.60366%0.664SS**THydrogen-bonded Turntrans-74-21.1-173.100000113.9A82A82-A85 PolarHBondContact O-N 3.44Å
86N83.9Confident85.3Confident160 Ų160125 Ų12586%0.85667%0.674SS**THydrogen-bonded Turntrans-124.118.7-179.7-59.1-47.5000112.4Y84Y84-N86 VanDerWaalsContact C-N 3.32Å; Y84-N86 PolarHBondContact O-N 3.5Å
87D71.1Confident84.6Confident128 Ų128129.8 Ų129.868%0.68467%0.672SS**  trans-84.5115.2173.3-121.1-1.4000107.3
88E62.6Low83.7Confident266 Ų266130.5 Ų130.5100%1.24369%0.685SS**  trans-84.80171.3-76.5-166.6162.500112

Retrieved 88 of 88 residues in 41.2 ms (Link to these results)