A0A087Y003_POEFO Loading...

60S ribosomal protein L29

AlphaFold DB , UniProt , Accession A0A087Y003, Species POEFO (Poecilia formosa, Amazon molly), Gene n/a, Length 61 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M75.3Confident92.6Very high243 Ų243135.2 Ų135.2100%1.19771%0.714SS**  01210-78.2-158-65.600109.2
2A84.1Confident93Very high103 Ų103128.6 Ų128.685%0.85168%0.676SS**PPolyproline II helixtrans-81.5135.9174.900000109.8
3K92.8Very high93.4Very high209 Ų209123.7 Ų123.791%0.90966%0.659SS**PPolyproline II helixtrans-73.2131.1177.4-63.4-159.6-62-177.10110.3
4S93.8Very high93.7Very high98 Ų98125.2 Ų125.269%0.68565%0.651SS**PPolyproline II helixtrans-93171.1172.858.10000111.9N6S4-N6 PolarHBondContact O-OD1 3.3Å
5K94.9Very high94Very high171 Ų171122.6 Ų122.674%0.74363%0.633SS**PPolyproline II helixtrans-70.4131.7173.7-172.4176.2-174.31070110.2H7K5-H7 WeakPolarHBondContact CE-O 3.49Å
6N93.4Very high94.2Very high160 Ų160124.3 Ų124.386%0.85663%0.629SS**  trans-89.3-23.4-174.2-60.9-34.3000114.3S4S4-N6 PolarHBondContact O-OD1 3.3Å
7H96.8Very high94.4Very high144 Ų144123.3 Ų123.367%0.66762%0.621SS**  trans-153.2142.4-177.6178.370.3000112.8K5 T9K5-H7 WeakPolarHBondContact CE-O 3.49Å; H7-T9 PolarHBondContact NE2-OG1 3.47Å
8T96.1Very high94.6Very high76 Ų76126.4 Ų126.447%0.46662%0.624SS.*  trans-154.6132.6170.2-171.50000112.5H10T8-H10 VanDerWaalsContact C-N 3.3Å; T8-H10 WeakPolarHBondContact OG1-CB 3.46Å; T8-H10 PolarHBondContact OG1-N 2.97Å
9T97.3Very high94.6Very high86 Ų86126.9 Ų126.953%0.52863%0.63SS.*  trans-94.89.2167.3-50.60000111.1H7 N11 Q12H7-T9 PolarHBondContact NE2-OG1 3.47Å; T9-N11 PolarHBondContact O-N 3.19Å; T9-Q12 HydrophobicContact CG2-CB 3.85Å; T9-Q12 HydrophobicContact CG2-CG 3.79Å; T9-Q12 WeakPolarHBondContact O-CB 3.4Å; T9-Q12 WeakPolarHBondContact O-CG 3.46Å; T9-Q12 PolarHBondContact O-N 2.93Å; T9-Q12 VanDerWaalsContact O-N 3.16Å
10H97.4Very high94.7Very high139 Ų139122 Ų12264%0.64461%0.613SS**THydrogen-bonded Turntrans-58.5136.9176.7-172.1-108.1000110.5T8 Q12T8-H10 VanDerWaalsContact C-N 3.3Å; T8-H10 WeakPolarHBondContact OG1-CB 3.46Å; T8-H10 PolarHBondContact OG1-N 2.97Å; H10-Q12 PolarHBondContact O-N 3.12Å; H10-Q12 VanDerWaalsContact O-N 3.13Å
11N97.3Very high94.8Very high58 Ų58121.7 Ų121.731%0.3161%0.612SS.*THydrogen-bonded Turntrans66.3-3.1-176.5-164.545.7000116.4T9 R14 K15T9-N11 PolarHBondContact O-N 3.19Å; N11-R14 PolarHBondContact O-N 3.2Å; N11-R14 WeakPolarHBondContact OD1-CB 3.38Å; N11-R14 WeakPolarHBondContact OD1-CD 3.35Å; N11-R14 PolarHBondContact OD1-NH1 3.48Å; N11-K15 WeakPolarHBondContact O-CG 3.4Å; N11-K15 PolarHBondContact O-N 3.19Å; N11-K15 VanDerWaalsContact O-N 3.09Å
12Q97.5Very high95.8Very high56 Ų56118.3 Ų118.326%0.26259%0.59SS.*Hα-helixtrans-64.8-49.8178.4-58.4-57.7-26.100111.3T9 H10 R14 K15 W16T9-Q12 HydrophobicContact CG2-CB 3.85Å; T9-Q12 HydrophobicContact CG2-CG 3.79Å; T9-Q12 WeakPolarHBondContact O-CB 3.4Å; T9-Q12 WeakPolarHBondContact O-CG 3.46Å; T9-Q12 PolarHBondContact O-N 2.93Å; T9-Q12 VanDerWaalsContact O-N 3.16Å; H10-Q12 PolarHBondContact O-N 3.12Å; H10-Q12 VanDerWaalsContact O-N 3.13Å; Q12-R14 VanDerWaalsContact C-N 3.33Å; Q12-R14 PolarHBondContact O-N 3.19Å; Q12-K15 PolarHBondContact O-N 3.39Å; Q12-K15 VanDerWaalsContact O-N 3.13Å; Q12-W16 HydrophobicContact CB-CH2 4.12Å; Q12-W16 HydrophobicContact CB-CZ2 3.84Å; Q12-W16 VanDerWaalsContact O-CG 3.25Å; Q12-W16 PolarHBondContact O-N 3.06Å
13S97.6Very high96.4Very high65 Ų65122.6 Ų122.646%0.45559%0.59SS.*Hα-helixtrans-56.9-45.2176.4179.20000112K15 W16 H17S13-K15 VanDerWaalsContact C-N 3.32Å; S13-K15 PolarHBondContact O-N 3.33Å; S13-W16 PolarHBondContact O-N 3.15Å; S13-H17 WeakPolarHBondContact O-CB 3.41Å; S13-H17 PolarHBondContact O-N 3.11Å; S13-H17 PolarHBondContact O-ND1 3.27Å; S13-H17 PolarHBondContact OG-CE1 3.21Å; S13-H17 PolarHBondContact OG-ND1 2.98Å; S13-H17 VanDerWaalsContact OG-ND1 3.16Å
14R97.7Very high96.5Very high145 Ų145118.6 Ų118.655%0.54759%0.585SS.*Hα-helixtrans-60.3-40.3178.3-172.1-177.8-61.5103.7-3.3112.4N11 Q12 R18N11-R14 PolarHBondContact O-N 3.2Å; N11-R14 WeakPolarHBondContact OD1-CB 3.38Å; N11-R14 WeakPolarHBondContact OD1-CD 3.35Å; N11-R14 PolarHBondContact OD1-NH1 3.48Å; Q12-R14 VanDerWaalsContact C-N 3.33Å; Q12-R14 PolarHBondContact O-N 3.19Å; R14-R18 PolarHBondContact O-N 3.2Å
15K97.4Very high96.6Very high86 Ų86124.9 Ų124.937%0.37459%0.594SS.*Hα-helixtrans-66.2-44.5175.5-71.6-177.1-61.4169.40112N11 Q12 S13 H17 R18N11-K15 WeakPolarHBondContact O-CG 3.4Å; N11-K15 PolarHBondContact O-N 3.19Å; N11-K15 VanDerWaalsContact O-N 3.09Å; Q12-K15 PolarHBondContact O-N 3.39Å; Q12-K15 VanDerWaalsContact O-N 3.13Å; S13-K15 VanDerWaalsContact C-N 3.32Å; S13-K15 PolarHBondContact O-N 3.33Å; K15-H17 VanDerWaalsContact C-N 3.3Å; K15-H17 PolarHBondContact O-N 2.98Å; K15-R18 WeakPolarHBondContact O-CB 3.37Å; K15-R18 PolarHBondContact O-N 3Å
16W97.3Very high96.6Very high149 Ų149122 Ų12256%0.56460%0.595SS**Hα-helixtrans-62.6-38.4178-57.5-26.5000112Q12 S13 G20 I21Q12-W16 HydrophobicContact CB-CH2 4.12Å; Q12-W16 HydrophobicContact CB-CZ2 3.84Å; Q12-W16 VanDerWaalsContact O-CG 3.25Å; Q12-W16 PolarHBondContact O-N 3.06Å; S13-W16 PolarHBondContact O-N 3.15Å; W16-G20 CarbonylContact O-C 3.58Å; W16-G20 PolarHBondContact O-N 3.46Å; W16-I21 HydrophobicContact CB-CD1 4.31Å; W16-I21 HydrophobicContact CB-CG1 4.24Å
17H97.9Very high96.7Very high108 Ų108119.3 Ų119.350%0.558%0.581SS.*Hα-helixtrans-81.8-17.4179.6-67.690.4000114.1S13 K15 N19 G20S13-H17 WeakPolarHBondContact O-CB 3.41Å; S13-H17 PolarHBondContact O-N 3.11Å; S13-H17 PolarHBondContact O-ND1 3.27Å; S13-H17 PolarHBondContact OG-CE1 3.21Å; S13-H17 PolarHBondContact OG-ND1 2.98Å; S13-H17 VanDerWaalsContact OG-ND1 3.16Å; K15-H17 VanDerWaalsContact C-N 3.3Å; K15-H17 PolarHBondContact O-N 2.98Å; H17-N19 VanDerWaalsContact C-N 3.25Å; H17-N19 PolarHBondContact O-N 3.16Å; H17-G20 PolarHBondContact O-N 2.98Å
18R97.5Very high96.7Very high179 Ų179122.8 Ų122.868%0.67559%0.588SS**Hα-helixtrans-55.9-40.9175.1-174.3-177.3-68.1146.2-5.9112.2R14 K15R14-R18 PolarHBondContact O-N 3.2Å; K15-R18 WeakPolarHBondContact O-CB 3.37Å; K15-R18 PolarHBondContact O-N 3Å
19N94.5Very high96.7Very high137 Ų137128.1 Ų128.173%0.73360%0.601SS**SBendtrans-97.7-6.1175-63.1-16.6000112.5H17H17-N19 VanDerWaalsContact C-N 3.25Å; H17-N19 PolarHBondContact O-N 3.16Å
20G96.8Very high96.6Very high28 Ų28129.9 Ų129.929%0.28960%0.603SS.*  trans75.4140.5-174.900000113.4W16 H17 K22W16-G20 CarbonylContact O-C 3.58Å; W16-G20 PolarHBondContact O-N 3.46Å; H17-G20 PolarHBondContact O-N 2.98Å; G20-K22 PolarHBondContact O-N 3.47Å; G20-K22 VanDerWaalsContact O-N 3.17Å
21I97.1Very high96.5Very high116 Ų116127.7 Ų127.760%0.59560%0.604SS**  trans-80.897.6172.6-56.3176.5000107.8W16W16-I21 HydrophobicContact CB-CD1 4.31Å; W16-I21 HydrophobicContact CB-CG1 4.24Å
22K96.9Very high96.5Very high171 Ų171129 Ų12974%0.74361%0.611SS**PPolyproline II helixtrans-82.7135.5-179.9-54.2-58.1-178.8178.60110.4G20G20-K22 PolarHBondContact O-N 3.47Å; G20-K22 VanDerWaalsContact O-N 3.17Å
23K96.3Very high96.5Very high193 Ų193135.8 Ų135.884%0.83964%0.639SS**PPolyproline II helixtrans-68.3149.6171.4-65.1-176-178.7-1790109.8
24P95.9Very high96.4Very high125 Ų125136.6 Ų136.681%0.81266%0.658SS**PPolyproline II helixtrans-58.3146.8170.426.5-34.1000109.8S26P24-S26 PolarHBondContact O-N 2.92Å
25R95.1Very high96.4Very high230 Ų230132.2 Ų132.287%0.86865%0.647SS**PPolyproline II helixtrans-72.4128.2175.8-69.9-176.5167.6-169.1-4.1109.1
26S94.9Very high96.5Very high111 Ų111132.4 Ų132.478%0.77665%0.652SS**PPolyproline II helixtrans-83.4130.5167.451.40000109.6P24P24-S26 PolarHBondContact O-N 2.92Å
27N95.3Very high96.5Very high104 Ų104130.2 Ų130.256%0.55666%0.657SS**PPolyproline II helixtrans-103154.3172.1-61.5-59.3000109.7Y29 E30N27-Y29 PolarHBondContact O-N 3.11Å; N27-E30 PolarHBondContact N-OE1 3.1Å; N27-E30 VanDerWaalsContact N-OE1 3.11Å
28R96.7Very high96.5Very high216 Ų216132.3 Ų132.382%0.81567%0.665SS**SBendtrans-61.9-34.2176.4-175.7-177.5-72.9179.1-2.2112
29Y95.8Very high96.5Very high188 Ų188128.8 Ų128.874%0.73765%0.654SS**SBendtrans-128.2108.3-178.7-53.3-62.4000109.7N27N27-Y29 PolarHBondContact O-N 3.11Å
30E95.8Very high96.7Very high123 Ų123123.4 Ų123.458%0.57563%0.625SS**  trans-82.8163.4176.9-67.3-60.6155.100112.1N27N27-E30 PolarHBondContact N-OE1 3.1Å; N27-E30 VanDerWaalsContact N-OE1 3.11Å
31S95.7Very high96.7Very high94 Ų94129.6 Ų129.666%0.65764%0.64SS**  trans-70.5145.4177.685.20000111.8K33S31-K33 VanDerWaalsContact C-N 3.29Å; S31-K33 PolarHBondContact O-N 2.96Å
32L96.6Very high96.7Very high86 Ų86129 Ų12945%0.4564%0.638SS.*  trans-92.824.6175.7-59.3175.3000113G34 V35 L40 M43L32-G34 PolarHBondContact O-N 3.29Å; L32-V35 HydrophobicContact CB-CG2 4.2Å; L32-V35 HydrophobicContact CD2-CG2 4.33Å; L32-V35 PolarHBondContact O-N 3.34Å; L32-L40 HydrophobicContact CB-CD2 4Å; L32-L40 HydrophobicContact CD1-CD2 4.08Å; L32-M43 HydrophobicContact CD1-CE 3.35Å; L32-M43 HydrophobicContact CD1-SD 4.11Å
33K96.8Very high96.7Very high197 Ų197122.6 Ų122.686%0.85761%0.611SS**THydrogen-bonded Turntrans-68.1129.6179.2-176178177.7-1780109.5S31S31-K33 VanDerWaalsContact C-N 3.29Å; S31-K33 PolarHBondContact O-N 2.96Å
34G97.1Very high96.7Very high82 Ų82121.9 Ų121.985%0.84560%0.604SS**THydrogen-bonded Turntrans86.9-0.6179.800000115.3L32L32-G34 PolarHBondContact O-N 3.29Å
35V97.7Very high96.7Very high54 Ų54120.9 Ų120.933%0.32759%0.586SS.*SBendtrans-72.4150.6171179.50000110L32 F39 L40L32-V35 HydrophobicContact CB-CG2 4.2Å; L32-V35 HydrophobicContact CD2-CG2 4.33Å; L32-V35 PolarHBondContact O-N 3.34Å; V35-F39 HydrophobicContact CG1-CD1 3.72Å; V35-F39 HydrophobicContact CG1-CE1 4.28Å; V35-L40 HydrophobicContact CB-CD1 4.15Å; V35-L40 HydrophobicContact CB-CD2 4.06Å; V35-L40 HydrophobicContact CB-CG 4.08Å; V35-L40 HydrophobicContact CG1-CD2 4.04Å; V35-L40 HydrophobicContact CG1-CG 4.12Å; V35-L40 WeakPolarHBondContact O-CD1 3.3Å
36D97.9Very high96.7Very high89 Ų89112 Ų11248%0.47656%0.563SS.*  trans-44.5121.2-179.6168.445.4000112.7K38 F39 L40D36-K38 VanDerWaalsContact C-N 3.26Å; D36-K38 PolarHBondContact O-N 3.36Å; D36-K38 PolarHBondContact OD1-N 3.38Å; D36-K38 WeakPolarHBondContact OD2-CB 3.44Å; D36-K38 PolarHBondContact OD2-N 3.21Å; D36-F39 HydrophobicContact CB-CB 4.13Å; D36-F39 PolarHBondContact O-N 3.46Å; D36-F39 WeakPolarHBondContact OD2-CB 3.11Å; D36-F39 PolarHBondContact OD2-N 3.08Å; D36-L40 WeakPolarHBondContact O-CG 3.2Å; D36-L40 PolarHBondContact O-N 3.45Å
37P97.9Very high96.6Very high103 Ų103113 Ų11367%0.66955%0.553SS**Hα-helixtrans-57.9-33.8-179.9-26.735.1000113.9L40 R41P37-L40 PolarHBondContact O-N 2.88Å; P37-R41 VanDerWaalsContact O-CB 3.3Å; P37-R41 WeakPolarHBondContact O-CB 3.42Å; P37-R41 PolarHBondContact O-N 3.36Å
38K98.2Very high96.5Very high153 Ų153114.7 Ų114.767%0.66556%0.555SS**Hα-helixtrans-67.9-46.2-179.9-179-178.9-179.21790110.6D36 R41 N42D36-K38 VanDerWaalsContact C-N 3.26Å; D36-K38 PolarHBondContact O-N 3.36Å; D36-K38 PolarHBondContact OD1-N 3.38Å; D36-K38 WeakPolarHBondContact OD2-CB 3.44Å; D36-K38 PolarHBondContact OD2-N 3.21Å; K38-R41 PolarHBondContact O-N 3.43Å; K38-N42 PolarHBondContact O-N 2.92Å; K38-N42 VanDerWaalsContact O-N 3.08Å
39F97.9Very high96.4Very high104 Ų104109.5 Ų109.546%0.45654%0.54SS..Hα-helixtrans-59.7-47.6172.8174.6-101.1000112.1V35 D36 R41 N42 M43V35-F39 HydrophobicContact CG1-CD1 3.72Å; V35-F39 HydrophobicContact CG1-CE1 4.28Å; D36-F39 HydrophobicContact CB-CB 4.13Å; D36-F39 PolarHBondContact O-N 3.46Å; D36-F39 WeakPolarHBondContact OD2-CB 3.11Å; D36-F39 PolarHBondContact OD2-N 3.08Å; F39-R41 VanDerWaalsContact C-N 3.3Å; F39-R41 PolarHBondContact O-N 3.47Å; F39-N42 PolarHBondContact O-N 3.43Å; F39-M43 PolarHBondContact O-N 3.11Å
40L97.5Very high95.9Very high24 Ų24105.7 Ų105.713%0.12653%0.532CS..Hα-helixtrans-60.9-40178.9-71.6-177.4000112.1L32 V35 D36 P37 M43 R44L32-L40 HydrophobicContact CB-CD2 4Å; L32-L40 HydrophobicContact CD1-CD2 4.08Å; V35-L40 HydrophobicContact CB-CD1 4.15Å; V35-L40 HydrophobicContact CB-CD2 4.06Å; V35-L40 HydrophobicContact CB-CG 4.08Å; V35-L40 HydrophobicContact CG1-CD2 4.04Å; V35-L40 HydrophobicContact CG1-CG 4.12Å; V35-L40 WeakPolarHBondContact O-CD1 3.3Å; D36-L40 WeakPolarHBondContact O-CG 3.2Å; D36-L40 PolarHBondContact O-N 3.45Å; P37-L40 PolarHBondContact O-N 2.88Å; L40-M43 HydrophobicContact CD2-CE 3.74Å; L40-M43 PolarHBondContact O-N 2.94Å; L40-R44 WeakPolarHBondContact O-CB 3.42Å; L40-R44 WeakPolarHBondContact O-CG 3.38Å; L40-R44 PolarHBondContact O-N 3.27Å
41R97.7Very high95.3Very high158 Ų158108.1 Ų108.160%0.59654%0.541SS*.Hα-helixtrans-62-47.3176.3-174171.769.6117.90.5111P37 K38 F39 R44 F45P37-R41 VanDerWaalsContact O-CB 3.3Å; P37-R41 WeakPolarHBondContact O-CB 3.42Å; P37-R41 PolarHBondContact O-N 3.36Å; K38-R41 PolarHBondContact O-N 3.43Å; F39-R41 VanDerWaalsContact C-N 3.3Å; F39-R41 PolarHBondContact O-N 3.47Å; R41-R44 PolarHBondContact O-N 3.24Å; R41-F45 HydrophobicContact CG-CD2 3.93Å; R41-F45 HydrophobicContact CG-CE2 3.54Å; R41-F45 WeakPolarHBondContact O-CD2 3.38Å; R41-F45 PolarHBondContact O-N 2.8Å; R41-F45 VanDerWaalsContact O-N 3.11Å
42N97.6Very high94.6Very high103 Ų103112.8 Ų112.855%0.55155%0.55SS*.Hα-helixtrans-59.8-49.9175.617756.9000112.3K38 F39 R44 F45 A46K38-N42 PolarHBondContact O-N 2.92Å; K38-N42 VanDerWaalsContact O-N 3.08Å; F39-N42 PolarHBondContact O-N 3.43Å; N42-R44 VanDerWaalsContact C-N 3.27Å; N42-R44 PolarHBondContact O-N 3.48Å; N42-F45 PolarHBondContact O-N 3.41Å; N42-F45 VanDerWaalsContact O-N 3.1Å; N42-A46 PolarHBondContact O-N 3.25Å
43M97Very high93.5Very high38 Ų38110.7 Ų110.719%0.18755%0.548CS..Hα-helixtrans-59.5-38.4179.6-178.1-169.755.800111.8L32 F39 L40 A46 K47L32-M43 HydrophobicContact CD1-CE 3.35Å; L32-M43 HydrophobicContact CD1-SD 4.11Å; F39-M43 PolarHBondContact O-N 3.11Å; L40-M43 HydrophobicContact CD2-CE 3.74Å; L40-M43 PolarHBondContact O-N 2.94Å; M43-A46 PolarHBondContact O-N 3.3Å; M43-K47 HydrophobicContact CG-CD 4.16Å; M43-K47 WeakPolarHBondContact O-CB 3.49Å; M43-K47 WeakPolarHBondContact O-CG 3.48Å; M43-K47 PolarHBondContact O-N 3.02Å; M43-K47 PolarHBondContact SD-NZ 2.98Å
44R96.2Very high92.6Very high178 Ų178104.9 Ų104.967%0.67253%0.526SS*.Hα-helixtrans-62.9-44.4175.1-74.9171.1-178.8-172.32111.7L40 R41 N42 K48L40-R44 WeakPolarHBondContact O-CB 3.42Å; L40-R44 WeakPolarHBondContact O-CG 3.38Å; L40-R44 PolarHBondContact O-N 3.27Å; R41-R44 PolarHBondContact O-N 3.24Å; N42-R44 VanDerWaalsContact C-N 3.27Å; N42-R44 PolarHBondContact O-N 3.48Å; R44-K48 WeakPolarHBondContact O-CB 3.36Å; R44-K48 PolarHBondContact O-N 3.33Å
45F96.1Very high91.5Very high103 Ų103109.7 Ų109.745%0.45252%0.524SS..Hα-helixtrans-63.8-44.4175.8-76.7-62000112.3R41 N42 K48 H49R41-F45 HydrophobicContact CG-CD2 3.93Å; R41-F45 HydrophobicContact CG-CE2 3.54Å; R41-F45 WeakPolarHBondContact O-CD2 3.38Å; R41-F45 PolarHBondContact O-N 2.8Å; R41-F45 VanDerWaalsContact O-N 3.11Å; N42-F45 PolarHBondContact O-N 3.41Å; N42-F45 VanDerWaalsContact O-N 3.1Å; F45-K48 WeakPolarHBondContact O-CB 3.39Å; F45-K48 PolarHBondContact O-N 2.98Å; F45-H49 PolarHBondContact O-CD2 3.16Å; F45-H49 PolarHBondContact O-N 3.44Å; F45-H49 VanDerWaalsContact O-N 3.11Å
46A94.3Very high90.4Very high45 Ų45110.5 Ų110.537%0.37254%0.536SS..Hα-helixtrans-58.4-51.5176.200000111.6N42 M43 K48 H49 N50N42-A46 PolarHBondContact O-N 3.25Å; M43-A46 PolarHBondContact O-N 3.3Å; A46-K48 VanDerWaalsContact C-N 3.26Å; A46-K48 PolarHBondContact O-N 3.22Å; A46-H49 PolarHBondContact O-N 3.34Å; A46-H49 VanDerWaalsContact O-N 3.15Å; A46-N50 PolarHBondContact O-N 3.17Å; A46-N50 PolarHBondContact O-OD1 3.38Å
47K93.4Very high89.4Confident130 Ų130109.3 Ų109.357%0.56554%0.539SS*.Hα-helixtrans-59-36.3177-74177.7178.1177.70112.6M43M43-K47 HydrophobicContact CG-CD 4.16Å; M43-K47 WeakPolarHBondContact O-CB 3.49Å; M43-K47 WeakPolarHBondContact O-CG 3.48Å; M43-K47 PolarHBondContact O-N 3.02Å; M43-K47 PolarHBondContact SD-NZ 2.98Å
48K93.6Very high88.4Confident141 Ų141113.4 Ų113.461%0.61354%0.541SS*.Hα-helixtrans-62.7-43.2176.7-177-178.3179.7-178.30111.9R44 F45 A46R44-K48 WeakPolarHBondContact O-CB 3.36Å; R44-K48 PolarHBondContact O-N 3.33Å; F45-K48 WeakPolarHBondContact O-CB 3.39Å; F45-K48 PolarHBondContact O-N 2.98Å; A46-K48 VanDerWaalsContact C-N 3.26Å; A46-K48 PolarHBondContact O-N 3.22Å
49H93.1Very high87.1Confident106 Ų106115 Ų11549%0.49155%0.548SS..Hα-helixtrans-94.6-11.8-172-64.4-63.3000115.1F45 A46 K51 K52F45-H49 PolarHBondContact O-CD2 3.16Å; F45-H49 PolarHBondContact O-N 3.44Å; F45-H49 VanDerWaalsContact O-N 3.11Å; A46-H49 PolarHBondContact O-N 3.34Å; A46-H49 VanDerWaalsContact O-N 3.15Å; H49-K51 PolarHBondContact O-N 2.75Å; H49-K52 WeakPolarHBondContact O-CB 3.39Å; H49-K52 PolarHBondContact O-N 2.92Å
50N87.1Confident85.7Confident108 Ų108114.5 Ų114.558%0.57856%0.563SS**THydrogen-bonded Turntrans-53.9-29.3176.7-80.6-9.3000114A46 K52A46-N50 PolarHBondContact O-N 3.17Å; A46-N50 PolarHBondContact O-OD1 3.38Å; N50-K52 VanDerWaalsContact C-N 3.27Å; N50-K52 PolarHBondContact O-N 2.76Å
51K82.4Confident83.8Confident174 Ų174119.7 Ų119.776%0.75761%0.609SS**THydrogen-bonded Turntrans-67-24.6178.3-61.6-176.8-178.2-178.50113.6H49H49-K51 PolarHBondContact O-N 2.75Å
52K80.6Confident83.1Confident193 Ų193117.8 Ų117.884%0.83961%0.61SS**THydrogen-bonded Turntrans-70.7-35.1-176.9-168.6-179.6178.7-1770112.1H49 N50H49-K52 WeakPolarHBondContact O-CB 3.39Å; H49-K52 PolarHBondContact O-N 2.92Å; N50-K52 VanDerWaalsContact C-N 3.27Å; N50-K52 PolarHBondContact O-N 2.76Å
53G74.1Confident82.3Confident41 Ų41118.6 Ų118.642%0.42361%0.613SS.*THydrogen-bonded Turntrans-87.1-3.6-179.600000114.7K55 A56 A57G53-K55 VanDerWaalsContact C-N 3.34Å; G53-K55 PolarHBondContact O-N 3.13Å; G53-A56 PolarHBondContact O-N 3.09Å; G53-A57 WeakPolarHBondContact O-CB 3.44Å; G53-A57 PolarHBondContact O-N 3.35Å
54L78.1Confident81.5Confident75 Ų75123.1 Ų123.139%0.39364%0.637SS.*Hα-helixtrans-64.8-34.9-167.6-130.1107000113.5R58L54-R58 WeakPolarHBondContact O-CB 3.33Å; L54-R58 WeakPolarHBondContact O-CG 3.11Å; L54-R58 PolarHBondContact O-N 3.42Å
55K73.4Confident80.7Confident184 Ų184119.8 Ų119.880%0.864%0.635SS**Hα-helixtrans-68.7-40.1176.9-74.7-172.8177.1-1770112.1G53 K59G53-K55 VanDerWaalsContact C-N 3.34Å; G53-K55 PolarHBondContact O-N 3.13Å; K55-K59 WeakPolarHBondContact O-CB 2.96Å; K55-K59 PolarHBondContact O-N 3.16Å
56A74.7Confident79.7Confident71 Ų71120.9 Ų120.959%0.58765%0.646SS**Hα-helixtrans-69.2-43.2176.300000111.1G53 R58 K59 A60G53-A56 PolarHBondContact O-N 3.09Å; A56-R58 PolarHBondContact O-N 3.13Å; A56-K59 PolarHBondContact O-N 3.06Å; A56-A60 PolarHBondContact O-N 3.35Å; A56-A60 VanDerWaalsContact O-N 3.12Å
57A76.8Confident78.7Confident64 Ų64125.9 Ų125.953%0.52967%0.665SS.*Hα-helixtrans-62.3-40.5176.500000112.8G53 K59 A60 A61G53-A57 WeakPolarHBondContact O-CB 3.44Å; G53-A57 PolarHBondContact O-N 3.35Å; A57-K59 VanDerWaalsContact C-N 3.32Å; A57-K59 PolarHBondContact O-N 3.41Å; A57-A60 PolarHBondContact O-N 3.46Å; A57-A61 PolarHBondContact O-N 3.41Å
58R77.7Confident77.7Confident188 Ų188125.6 Ų125.671%0.70967%0.672SS**Hα-helixtrans-69.2-25.2174.8-83.4-175.8-179.9151.2-0.9114.5L54 A56L54-R58 WeakPolarHBondContact O-CB 3.33Å; L54-R58 WeakPolarHBondContact O-CG 3.11Å; L54-R58 PolarHBondContact O-N 3.42Å; A56-R58 PolarHBondContact O-N 3.13Å
59K70.8Confident76.5Confident188 Ų188124.5 Ų124.582%0.81768%0.676SS**Hα-helixtrans-81.3-24.5177.1-166.8-178.7179.6-173.90111.8K55 A56 A57K55-K59 WeakPolarHBondContact O-CB 2.96Å; K55-K59 PolarHBondContact O-N 3.16Å; A56-K59 PolarHBondContact O-N 3.06Å; A57-K59 VanDerWaalsContact C-N 3.32Å; A57-K59 PolarHBondContact O-N 3.41Å
60A67.6Low75.1Confident92 Ų92126 Ų12676%0.7669%0.692SS**Hα-helixtrans-89.1-14.9178.100000113.5A56 A57A56-A60 PolarHBondContact O-N 3.35Å; A56-A60 VanDerWaalsContact O-N 3.12Å; A57-A60 PolarHBondContact O-N 3.46Å
61A57.9Low74Confident134 Ų134127.6 Ų127.6100%1.10770%0.702SS**  trans-88.50169.100000109.9A57A57-A61 PolarHBondContact O-N 3.41Å

Retrieved 61 of 61 residues in 89.2 ms (Link to these results)