A0A087YED3_POEFO Loading...

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

AlphaFold DB , UniProt , Accession A0A087YED3, Species POEFO (Poecilia formosa, Amazon molly), Gene n/a, Length 101 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M48.9Very low52.6Low244 Ų244136.6 Ų136.6100%1.20279%0.789SS**  0146.10-72.3179.1162.200108.6
2S46.4Very low52.6Low129 Ų129143.7 Ų143.790%0.90279%0.793SS**  trans86.568.6179.3-67.30000118.4
3S54.1Low52.7Low120 Ų120138.2 Ų138.284%0.83978%0.778SS**  trans-125.942.6158.8176.40000111.1
4F54.3Low52.7Low191 Ų191131.4 Ų131.484%0.83875%0.754SS**  trans-117.94.1-178.9-106-86.2000114.6
5G53.9Low52.8Low75 Ų75128.9 Ų128.977%0.77374%0.743SS**SBendtrans-89.4-8.7-173.700000116.8
6R53.8Low52.9Low238 Ų238123.8 Ų123.890%0.89873%0.726SS**SBendtrans-104.8-9.7-171.5-87.4-174156.7162.4-4.5116.1
7A53Low53.1Low71 Ų71125.2 Ų125.259%0.58773%0.729SS**SBendtrans-86.6-20.5-177.700000114.3
8I54.4Low53.2Low134 Ų134126.9 Ų126.969%0.68773%0.734SS**Hα-helixtrans-84-26-175.1-63.9175.2000112.4V10I8-V10 VanDerWaalsContact C-N 3.35Å; I8-V10 PolarHBondContact O-N 2.75Å
9G50Low53.3Low57 Ų57132.2 Ų132.259%0.58874%0.74SS**Hα-helixtrans-70.3-26.6-179.500000114.5
10V54.9Low53.4Low109 Ų109134.1 Ų134.166%0.66174%0.742SS**Hα-helixtrans-82.5-26.7-176.2-176.60000112I8 R12 G14I8-V10 VanDerWaalsContact C-N 3.35Å; I8-V10 PolarHBondContact O-N 2.75Å; V10-R12 VanDerWaalsContact C-N 3.32Å; V10-R12 PolarHBondContact O-N 2.85Å; V10-G14 PolarHBondContact O-N 2.92Å
11L54.6Low53.9Low135 Ų135130 Ų13071%0.70773%0.731SS**Hα-helixtrans-72.6-23.5177.8-75.8167.4000113.4T15L11-T15 PolarHBondContact O-OG1 3.21Å
12R52.4Low54.6Low221 Ų221124.7 Ų124.783%0.83472%0.715SS**Hα-helixtrans-88-22179-152.5173.8-173169.31.3113.7V10V10-R12 VanDerWaalsContact C-N 3.32Å; V10-R12 PolarHBondContact O-N 2.85Å
13A53.8Low55.3Low73 Ų73121.5 Ų121.560%0.60370%0.702SS**Hα-helixtrans-84-27.8175.500000112.9
14G52.8Low55.6Low43 Ų43126.4 Ų126.444%0.44370%0.702SS.*Hα-helixtrans-74.9-23-178.900000115.2V10V10-G14 PolarHBondContact O-N 2.92Å
15T54.9Low56Low94 Ų94124.9 Ų124.958%0.57770%0.701SS**THydrogen-bonded Turntrans-85.8-14.4-177.232.30000114.1L11L11-T15 PolarHBondContact O-OG1 3.21Å
16G54.6Low56.5Low46 Ų46125.5 Ų125.547%0.47469%0.69SS.*THydrogen-bonded Turntrans-74.8-32.1177.200000113.7
17L55Low56.8Low149 Ų149118.7 Ų118.778%0.7868%0.679SS**THydrogen-bonded Turntrans-78.9-21.5-177.9-87.7155.4000113.5R19L17-R19 VanDerWaalsContact C-N 3.34Å
18L56.4Low57.3Low155 Ų155125.8 Ų125.881%0.81269%0.69SS**THydrogen-bonded Turntrans-81.9-10.5176.9-69.7168.7000113.5
19R54.6Low57.3Low228 Ų228127.8 Ų127.886%0.8669%0.694SS**SBendtrans-94.2-14.2-178.5-160.9172.1175.3-179-1.8113.8L17 G21L17-R19 VanDerWaalsContact C-N 3.34Å; R19-G21 PolarHBondContact O-N 3.07Å
20H54.7Low57.6Low169 Ų169129.7 Ų129.778%0.78271%0.705SS**  trans-93.182.9170.4-86.3-53.1000109.8
21G64.8Low57.7Low49 Ų49130.2 Ų130.251%0.50571%0.713SS.*  trans-53.4157.1156.600000109.8R19 G23R19-G21 PolarHBondContact O-N 3.07Å; G21-G23 PolarHBondContact O-N 3.44Å
22P62.3Low57.8Low132 Ų132127 Ų12786%0.85771%0.713SS**  trans-51.4108.9-17522.1-32.8000108.1R24P22-R24 VanDerWaalsContact C-N 3.31Å; P22-R24 PolarHBondContact O-N 2.79Å
23G62Low58.3Low62 Ų62118.9 Ų118.964%0.63970%0.698SS**  trans-55.8105.8175.800000105G21 I25G21-G23 PolarHBondContact O-N 3.44Å; G23-I25 VanDerWaalsContact C-N 3.27Å; G23-I25 PolarHBondContact O-N 3.38Å
24R60.5Low58.9Low223 Ų223122.4 Ų122.484%0.84271%0.714SS**  trans-59.3101.1-179.2-177.9174.7166-179-8.6104.4P22 T26P22-R24 VanDerWaalsContact C-N 3.31Å; P22-R24 PolarHBondContact O-N 2.79Å; R24-T26 HydrophobicContact CG-CG2 4.29Å; R24-T26 PolarHBondContact O-N 2.79Å
25I63.2Low59.7Low160 Ų160128.5 Ų128.582%0.82173%0.731SS**  trans-6687.1175.1-59.6174.6000103.6G23 S27G23-I25 VanDerWaalsContact C-N 3.27Å; G23-I25 PolarHBondContact O-N 3.38Å; I25-S27 PolarHBondContact O-N 3.36Å
26T63.6Low60.9Low87 Ų87127.1 Ų127.153%0.53472%0.719SS.*  trans-66.694.5166.558.60000103.6R24 R28R24-T26 HydrophobicContact CG-CG2 4.29Å; R24-T26 PolarHBondContact O-N 2.79Å; T26-R28 PolarHBondContact O-N 2.77Å
27S61.3Low62.2Low95 Ų95131.1 Ų131.166%0.66473%0.726SS**  trans-57.493.3158.4173.20000105I25 K29I25-S27 PolarHBondContact O-N 3.36Å; S27-K29 PolarHBondContact O-N 2.7Å
28R61.8Low63.6Low220 Ų220130.3 Ų130.383%0.8373%0.73SS**  trans-67.496.8169.8-70.8-172.4-178.1-169.31104T26 A30T26-R28 PolarHBondContact O-N 2.77Å; R28-A30 PolarHBondContact O-N 3.29Å
29K54.8Low64.9Low176 Ų176125.8 Ų125.877%0.76570%0.704SS**  trans-61.686.6167.5-66-174.1-176-176.30106.9S27 S31S27-K29 PolarHBondContact O-N 2.7Å; K29-S31 PolarHBondContact O-N 2.76Å
30A56.6Low66.7Low98 Ų98123.3 Ų123.381%0.8170%0.696SS**G310 helixtrans-72.4-7.3178.800000112.1R28 G32R28-A30 PolarHBondContact O-N 3.29Å; A30-G32 VanDerWaalsContact C-N 3.33Å; A30-G32 PolarHBondContact O-N 3.46Å
31S56.4Low68.4Low120 Ų120125.6 Ų125.684%0.83970%0.698SS**G310 helixtrans-84.73-176.265.50000114.8K29K29-S31 PolarHBondContact O-N 2.76Å
32G56.5Low69.7Low68 Ų68130.1 Ų130.170%0.70171%0.706SS**G310 helixtrans-121.521.5-174.100000114.8A30A30-G32 VanDerWaalsContact C-N 3.33Å; A30-G32 PolarHBondContact O-N 3.46Å
33G64.5Low70.9Confident50 Ų50132.1 Ų132.152%0.51570%0.698SS.*SBendtrans-75.1168173.300000112.4H35G33-H35 PolarHBondContact O-N 2.73Å
34P65.5Low72.2Confident146 Ų146132.5 Ų132.595%0.94869%0.688SS**  trans-70.173.9179.930.4-34000110.3
35H70.7Confident73.4Confident171 Ų171126.9 Ų126.979%0.79267%0.672SS**PPolyproline II helixtrans-85.7145.6177.4-154.771.5000109.2G33 E37G33-H35 PolarHBondContact O-N 2.73Å; H35-E37 PolarHBondContact O-N 3.2Å
36I78.8Confident74.6Confident66 Ų66122.8 Ų122.834%0.33865%0.651SS.*PPolyproline II helixtrans-62.2120.8175.2-66166000107.4Q45 T47I36-Q45 HydrophobicContact CG2-CB 4.2Å; I36-Q45 WeakPolarHBondContact CG2-O 3.33Å; I36-T47 HydrophobicContact CD1-CG2 4.46Å
37E82.6Confident75.8Confident129 Ų129121.6 Ų121.660%0.60364%0.644SS**PPolyproline II helixtrans-66.5137.4-179.6-70.9-179.2176.700110.6H35 Q39H35-E37 PolarHBondContact O-N 3.2Å; E37-Q39 PolarHBondContact O-N 3.44Å
38P83.3Confident77.2Confident133 Ų133126.1 Ų126.186%0.86465%0.652SS**PPolyproline II helixtrans-65.9119.4174.926.8-32.3000110
39Q85.5Confident78.5Confident60 Ų60123.3 Ų123.328%0.2865%0.646SS.*PPolyproline II helixtrans-102.9144.4173-90.4115.72600111.5E37 Q42 Q45E37-Q39 PolarHBondContact O-N 3.44Å; Q39-Q42 HydrophobicContact CB-CB 4.27Å; Q39-Q45 VanDerWaalsContact OE1-N 3.09Å
40Y91.8Very high80.2Confident175 Ų175119.2 Ų119.269%0.68663%0.629SS**SBendtrans-108.1128.1177.3-176.5-114.3000111.4Q42Y40-Q42 PolarHBondContact O-N 3.32Å; Y40-Q42 VanDerWaalsContact O-N 3.07Å
41R90.8Very high82Confident217 Ų217119.2 Ų119.282%0.81961%0.611SS**SBendtrans54.221.8-179.7-61.9179.3-179.1-116.51.1114.9
42Q92Very high83.9Confident144 Ų144120.1 Ų120.167%0.67360%0.6SS**SBendtrans-127.6159.8179.1-68177.2-14.200109.9Q39 Y40Q39-Q42 HydrophobicContact CB-CB 4.27Å; Y40-Q42 PolarHBondContact O-N 3.32Å; Y40-Q42 VanDerWaalsContact O-N 3.07Å
43Y87.8Confident85.7Confident175 Ų175122.1 Ų122.169%0.68659%0.591SS**PPolyproline II helixtrans-66.2135.3175.7-166.2-91.7000110L46Y43-L46 HydrophobicContact CE1-CD1 3.83Å; Y43-L46 HydrophobicContact CE1-CG 4.21Å; Y43-L46 WeakPolarHBondContact OH-CD1 3.48Å
44P88.1Confident87.2Confident69 Ų69123.1 Ų123.145%0.44859%0.59SS.*PPolyproline II helixtrans-67.9148.2-176.328-35.7000111.9L46P44-L46 PolarHBondContact O-N 3.2Å
45Q86.8Confident88.7Confident105 Ų105122.3 Ų122.349%0.49157%0.573SS.*PPolyproline II helixtrans-67117.1170.4-71.4179.621.600110.6I36 Q39I36-Q45 HydrophobicContact CG2-CB 4.2Å; I36-Q45 WeakPolarHBondContact CG2-O 3.33Å; Q39-Q45 VanDerWaalsContact OE1-N 3.09Å
46L86.9Confident90Very high75 Ų75120.7 Ų120.739%0.39356%0.564SS.*PPolyproline II helixtrans-98.7134.6173.1-71176.5000110Y43 P44 K51Y43-L46 HydrophobicContact CE1-CD1 3.83Å; Y43-L46 HydrophobicContact CE1-CG 4.21Å; Y43-L46 WeakPolarHBondContact OH-CD1 3.48Å; P44-L46 PolarHBondContact O-N 3.2Å; L46-K51 HydrophobicContact CB-CD 4.42Å; L46-K51 HydrophobicContact CB-CG 4.23Å; L46-K51 HydrophobicContact CD1-CG 4.36Å
47T89.6Confident90.8Very high61 Ų61123 Ų12337%0.37458%0.577SS.*PPolyproline II helixtrans-72.4143.7173.468.60000110.1I36 K49 Q50 K51I36-T47 HydrophobicContact CD1-CG2 4.46Å; T47-K49 PolarHBondContact O-N 3.34Å; T47-Q50 PolarHBondContact O-N 2.96Å; T47-Q50 WeakPolarHBondContact OG1-CB 3.13Å; T47-Q50 WeakPolarHBondContact OG1-CG 3.34Å; T47-Q50 PolarHBondContact OG1-N 3.47Å; T47-Q50 PolarHBondContact OG1-OE1 3.39Å; T47-K51 PolarHBondContact O-N 2.79Å
48K89.9Confident91.5Very high190 Ų190119.6 Ų119.683%0.82657%0.567SS**Hα-helixtrans-60.2-33.2179.4-65.5-176.5-179.4-178.80112.4F52K48-F52 WeakPolarHBondContact O-CB 3.28Å; K48-F52 PolarHBondContact O-N 2.95Å; K48-F52 VanDerWaalsContact O-N 3.09Å
49K90.8Very high92.2Very high162 Ų162115.2 Ų115.270%0.70455%0.545SS*.Hα-helixtrans-64.6-46.9177.2-66.9-170.7176-1720111.9T47 K51 F52 E53T47-K49 PolarHBondContact O-N 3.34Å; K49-K51 VanDerWaalsContact C-N 3.33Å; K49-K51 PolarHBondContact O-N 3.24Å; K49-F52 PolarHBondContact O-N 3.27Å; K49-E53 WeakPolarHBondContact O-CB 3.43Å; K49-E53 WeakPolarHBondContact O-CG 3.33Å; K49-E53 PolarHBondContact O-N 3.43Å
50Q89.9Confident92.8Very high89 Ų89114.6 Ų114.642%0.41655%0.55SS.*Hα-helixtrans-59.8-42.5177.6-76.9165.6-30.300112.3T47 S54T47-Q50 PolarHBondContact O-N 2.96Å; T47-Q50 WeakPolarHBondContact OG1-CB 3.13Å; T47-Q50 WeakPolarHBondContact OG1-CG 3.34Å; T47-Q50 PolarHBondContact OG1-N 3.47Å; T47-Q50 PolarHBondContact OG1-OE1 3.39Å; Q50-S54 WeakPolarHBondContact O-CB 3.37Å; Q50-S54 PolarHBondContact O-N 3.39Å; Q50-S54 PolarHBondContact O-OG 3.19Å
51K93.3Very high93Very high99 Ų99110.9 Ų110.943%0.4354%0.541SS..Hα-helixtrans-61-50.4176-66.4-170.8-177.2-169.90111.2L46 T47 K49 E53 S54 E55L46-K51 HydrophobicContact CB-CD 4.42Å; L46-K51 HydrophobicContact CB-CG 4.23Å; L46-K51 HydrophobicContact CD1-CG 4.36Å; T47-K51 PolarHBondContact O-N 2.79Å; K49-K51 VanDerWaalsContact C-N 3.33Å; K49-K51 PolarHBondContact O-N 3.24Å; K51-E53 PolarHBondContact O-N 2.85Å; K51-S54 PolarHBondContact O-N 3.26Å; K51-S54 PolarHBondContact O-OG 3.37Å; K51-E55 WeakPolarHBondContact O-CG 3.49Å; K51-E55 PolarHBondContact O-N 2.68Å
52F95.9Very high93.2Very high138 Ų138107.5 Ų107.561%0.60553%0.528SS*.Hα-helixtrans-60.3-44.4179.5179.9-99.9000112.6K48 K49 S54 E55 F56K48-F52 WeakPolarHBondContact O-CB 3.28Å; K48-F52 PolarHBondContact O-N 2.95Å; K48-F52 VanDerWaalsContact O-N 3.09Å; K49-F52 PolarHBondContact O-N 3.27Å; F52-S54 VanDerWaalsContact C-N 3.33Å; F52-S54 PolarHBondContact O-N 2.98Å; F52-E55 PolarHBondContact O-N 3.09Å; F52-F56 VanDerWaalsContact O-CB 3.25Å; F52-F56 WeakPolarHBondContact O-CB 3.44Å; F52-F56 PolarHBondContact O-N 3.29Å
53E96.1Very high93.4Very high110 Ų110106.9 Ų106.951%0.51452%0.523SS..Hα-helixtrans-62.7-40.5176.7-73.5169.5-17700111.4K49 K51 F56 I57K49-E53 WeakPolarHBondContact O-CB 3.43Å; K49-E53 WeakPolarHBondContact O-CG 3.33Å; K49-E53 PolarHBondContact O-N 3.43Å; K51-E53 PolarHBondContact O-N 2.85Å; E53-F56 PolarHBondContact O-N 3.34Å; E53-I57 VanDerWaalsContact O-CG1 3.28Å; E53-I57 WeakPolarHBondContact O-CG1 3.38Å; E53-I57 PolarHBondContact O-N 3.24Å
54S94.7Very high93.8Very high71 Ų71105.6 Ų105.650%0.49752%0.517SS..Hα-helixtrans-64.8-42.9177.272.10000112.5Q50 K51 F52 S58Q50-S54 WeakPolarHBondContact O-CB 3.37Å; Q50-S54 PolarHBondContact O-N 3.39Å; Q50-S54 PolarHBondContact O-OG 3.19Å; K51-S54 PolarHBondContact O-N 3.26Å; K51-S54 PolarHBondContact O-OG 3.37Å; F52-S54 VanDerWaalsContact C-N 3.33Å; F52-S54 PolarHBondContact O-N 2.98Å; S54-S58 WeakPolarHBondContact O-CB 3.43Å; S54-S58 PolarHBondContact O-N 2.96Å
55E96.8Very high93.9Very high129 Ų129106.1 Ų106.160%0.60352%0.515SS*.Hα-helixtrans-67.3-39.7176.9-71.4170.5-173.300111K51 F52 S58 G59K51-E55 WeakPolarHBondContact O-CG 3.49Å; K51-E55 PolarHBondContact O-N 2.68Å; F52-E55 PolarHBondContact O-N 3.09Å; E55-S58 PolarHBondContact O-N 3.14Å; E55-G59 PolarHBondContact O-N 2.85Å
56F97.7Very high94.3Very high137 Ų137106.7 Ų106.760%0.60152%0.521SS*.Hα-helixtrans-63.5-45.9177.5-177.4-98.5000112F52 E53 G59 A60F52-F56 VanDerWaalsContact O-CB 3.25Å; F52-F56 WeakPolarHBondContact O-CB 3.44Å; F52-F56 PolarHBondContact O-N 3.29Å; E53-F56 PolarHBondContact O-N 3.34Å; F56-G59 PolarHBondContact O-N 3.44Å; F56-A60 WeakPolarHBondContact O-CB 3.36Å; F56-A60 PolarHBondContact O-N 2.89Å
57I97.4Very high94.6Very high116 Ų116107.7 Ų107.760%0.59552%0.52SS*.Hα-helixtrans-66.7-42.6177.9-66.9167.2000110.6E53 G59 A60 M61E53-I57 VanDerWaalsContact O-CG1 3.28Å; E53-I57 WeakPolarHBondContact O-CG1 3.38Å; E53-I57 PolarHBondContact O-N 3.24Å; I57-G59 VanDerWaalsContact C-N 3.3Å; I57-G59 PolarHBondContact O-N 2.83Å; I57-A60 PolarHBondContact O-N 3.33Å; I57-M61 WeakPolarHBondContact O-CB 3.25Å; I57-M61 PolarHBondContact O-N 2.82Å
58S96.6Very high94.7Very high57 Ų57108.1 Ų108.140%0.39952%0.518SS..Hα-helixtrans-60.6-41.7174.9-177.40000111.5S54 E55 M61 W62S54-S58 WeakPolarHBondContact O-CB 3.43Å; S54-S58 PolarHBondContact O-N 2.96Å; E55-S58 PolarHBondContact O-N 3.14Å; S58-M61 PolarHBondContact O-N 3.44Å; S58-W62 VanDerWaalsContact O-CD1 3.3Å; S58-W62 PolarHBondContact O-N 3.44Å; S58-W62 VanDerWaalsContact O-N 3.14Å
59G97.4Very high94.7Very high40 Ų40101.9 Ų101.941%0.41250%0.497SS..Hα-helixtrans-64.9-43.8175.500000112.3E55 F56 I57 M61 W62 F63E55-G59 PolarHBondContact O-N 2.85Å; F56-G59 PolarHBondContact O-N 3.44Å; I57-G59 VanDerWaalsContact C-N 3.3Å; I57-G59 PolarHBondContact O-N 2.83Å; G59-M61 VanDerWaalsContact C-N 3.34Å; G59-M61 PolarHBondContact O-N 2.88Å; G59-W62 PolarHBondContact O-N 3.42Å; G59-F63 WeakPolarHBondContact O-CB 3.48Å; G59-F63 PolarHBondContact O-N 3.48Å
60A97.6Very high94.7Very high47 Ų47103.5 Ų103.539%0.38850%0.499SS..Hα-helixtrans-63-39.7176.700000112.2F56 I57 W64F56-A60 WeakPolarHBondContact O-CB 3.36Å; F56-A60 PolarHBondContact O-N 2.89Å; I57-A60 PolarHBondContact O-N 3.33Å; A60-W64 VanDerWaalsContact O-CB 3.3Å; A60-W64 WeakPolarHBondContact O-CB 3.37Å; A60-W64 PolarHBondContact O-N 3.48Å
61M96.6Very high94.8Very high98 Ų98103.3 Ų103.348%0.48350%0.498SS..Hα-helixtrans-60-52.2174.7179.3-172.570.700111.3I57 S58 G59 W64 I65I57-M61 WeakPolarHBondContact O-CB 3.25Å; I57-M61 PolarHBondContact O-N 2.82Å; S58-M61 PolarHBondContact O-N 3.44Å; G59-M61 VanDerWaalsContact C-N 3.34Å; G59-M61 PolarHBondContact O-N 2.88Å; M61-W64 WeakPolarHBondContact O-CB 3.37Å; M61-W64 PolarHBondContact O-N 3.49Å; M61-I65 HydrophobicContact CG-CD1 4.19Å; M61-I65 WeakPolarHBondContact O-CG1 3.2Å; M61-I65 PolarHBondContact O-N 2.99Å
62W95.9Very high94.4Very high145 Ų145102.7 Ų102.755%0.54950%0.499SS..Hα-helixtrans-67.5-39.6179.8-80.7111.4000112.9S58 G59 W64 I65 L66S58-W62 VanDerWaalsContact O-CD1 3.3Å; S58-W62 PolarHBondContact O-N 3.44Å; S58-W62 VanDerWaalsContact O-N 3.14Å; G59-W62 PolarHBondContact O-N 3.42Å; W62-W64 VanDerWaalsContact C-N 3.28Å; W62-W64 PolarHBondContact O-N 3.32Å; W62-I65 HydrophobicContact CE3-CD1 4.09Å; W62-I65 HydrophobicContact CZ3-CD1 4.31Å; W62-I65 PolarHBondContact O-N 3.38Å; W62-L66 WeakPolarHBondContact O-CG 3.3Å; W62-L66 PolarHBondContact O-N 3.25Å
63F95.7Very high93.9Very high131 Ų13198.3 Ų98.358%0.57549%0.485SS*.Hα-helixtrans-56.2-46171.8171.7-102.2000110.6G59 I65 L66 W67G59-F63 WeakPolarHBondContact O-CB 3.48Å; G59-F63 PolarHBondContact O-N 3.48Å; F63-I65 PolarHBondContact O-N 3.38Å; F63-L66 PolarHBondContact O-N 3.3Å; F63-W67 HydrophobicContact CZ-CB 4.45Å; F63-W67 AromaticContact CZ-CD1 3.94Å; F63-W67 HydrophobicContact CZ-CG 4.36Å; F63-W67 WeakPolarHBondContact O-CB 3.19Å; F63-W67 PolarHBondContact O-N 2.86Å
64W95.1Very high93.1Very high148 Ų14897.1 Ų97.156%0.56148%0.482SS*.Hα-helixtrans-62.1-44.4178.9-171.9-100.3000112.6A60 M61 W62 W67 H68A60-W64 VanDerWaalsContact O-CB 3.3Å; A60-W64 WeakPolarHBondContact O-CB 3.37Å; A60-W64 PolarHBondContact O-N 3.48Å; M61-W64 WeakPolarHBondContact O-CB 3.37Å; M61-W64 PolarHBondContact O-N 3.49Å; W62-W64 VanDerWaalsContact C-N 3.28Å; W62-W64 PolarHBondContact O-N 3.32Å; W64-W67 HydrophobicContact CZ3-CE3 4.46Å; W64-W67 PolarHBondContact O-N 3.04Å; W64-H68 AromaticContact CD2-ND1 3.98Å; W64-H68 AromaticContact CE2-CE1 3.51Å; W64-H68 AromaticContact CE2-ND1 3.36Å; W64-H68 AromaticContact CH2-CE1 3.9Å; W64-H68 AromaticContact CZ2-CE1 3.19Å; W64-H68 WeakPolarHBondContact CZ2-CE1 3.08Å; W64-H68 AromaticContact CZ2-ND1 3.52Å; W64-H68 AromaticContact NE1-CE1 3.73Å; W64-H68 AromaticContact NE1-ND1 3.44Å; W64-H68 PolarHBondContact NE1-ND1 2.82Å; W64-H68 WeakPolarHBondContact O-CB 3.39Å; W64-H68 PolarHBondContact O-N 3.45Å
65I91.9Very high92.4Very high80 Ų8097.3 Ų97.341%0.4149%0.488SS..Hα-helixtrans-60.8-49.2177.8-66.9164.5000110.7M61 W62 F63 H68 C69M61-I65 HydrophobicContact CG-CD1 4.19Å; M61-I65 WeakPolarHBondContact O-CG1 3.2Å; M61-I65 PolarHBondContact O-N 2.99Å; W62-I65 HydrophobicContact CE3-CD1 4.09Å; W62-I65 HydrophobicContact CZ3-CD1 4.31Å; W62-I65 PolarHBondContact O-N 3.38Å; F63-I65 PolarHBondContact O-N 3.38Å; I65-H68 PolarHBondContact O-N 3.43Å; I65-C69 VanDerWaalsContact O-CB 3.26Å; I65-C69 WeakPolarHBondContact O-CB 3.26Å; I65-C69 PolarHBondContact O-N 2.88Å
66L93.4Very high91.6Very high117 Ų11796.6 Ų96.661%0.61349%0.487SS*.Hα-helixtrans-67.8-38.6-179-67.3174.8000111.8W62 F63 C69 W70W62-L66 WeakPolarHBondContact O-CG 3.3Å; W62-L66 PolarHBondContact O-N 3.25Å; F63-L66 PolarHBondContact O-N 3.3Å; L66-C69 PolarHBondContact O-N 3.5Å; L66-W70 PolarHBondContact O-N 2.84Å
67W95Very high90.9Very high96 Ų9697.1 Ų97.136%0.36450%0.495SS..Hα-helixtrans-62.9-47.9175.7-175.390.5000111.1F63 W64 C69 W70 H71F63-W67 HydrophobicContact CZ-CB 4.45Å; F63-W67 AromaticContact CZ-CD1 3.94Å; F63-W67 HydrophobicContact CZ-CG 4.36Å; F63-W67 WeakPolarHBondContact O-CB 3.19Å; F63-W67 PolarHBondContact O-N 2.86Å; W64-W67 HydrophobicContact CZ3-CE3 4.46Å; W64-W67 PolarHBondContact O-N 3.04Å; W67-C69 PolarHBondContact O-N 3.06Å; W67-W70 PolarHBondContact O-N 3.4Å; W67-H71 AromaticContact CD1-CD2 3.66Å; W67-H71 AromaticContact CD1-NE2 3.78Å; W67-H71 AromaticContact CD2-CD2 3.43Å; W67-H71 VanDerWaalsContact CD2-CD2 3.43Å; W67-H71 AromaticContact CE2-CD2 3.05Å; W67-H71 AromaticContact CE2-CG 3.99Å; W67-H71 AromaticContact CE2-NE2 3.28Å; W67-H71 VanDerWaalsContact CE2-NE2 3.28Å; W67-H71 AromaticContact CG-CD2 3.82Å; W67-H71 HydrophobicContact CH2-CB 4.33Å; W67-H71 AromaticContact CH2-CD2 3.91Å; W67-H71 AromaticContact CZ2-CD2 3.33Å; W67-H71 WeakPolarHBondContact CZ2-CD2 3.48Å; W67-H71 AromaticContact CZ2-CG 3.86Å; W67-H71 AromaticContact CZ2-NE2 3.48Å; W67-H71 WeakPolarHBondContact CZ2-NE2 3.33Å; W67-H71 HydrophobicContact CZ3-CB 4.32Å; W67-H71 AromaticContact NE1-CD2 3.21Å; W67-H71 PolarHBondContact NE1-CD2 3.25Å; W67-H71 AromaticContact NE1-NE2 3.05Å; W67-H71 PolarHBondContact NE1-NE2 3.29Å; W67-H71 WeakPolarHBondContact O-CB 3.23Å; W67-H71 PolarHBondContact O-CD2 3.42Å; W67-H71 PolarHBondContact O-N 2.82Å
68H91.4Very high90.3Very high70 Ų7093.8 Ų93.832%0.32449%0.489SS..Hα-helixtrans-64.5-39.7176.2-106.874.3000112.1W64 I65 W70 H71 D72W64-H68 AromaticContact CD2-ND1 3.98Å; W64-H68 AromaticContact CE2-CE1 3.51Å; W64-H68 AromaticContact CE2-ND1 3.36Å; W64-H68 AromaticContact CH2-CE1 3.9Å; W64-H68 AromaticContact CZ2-CE1 3.19Å; W64-H68 WeakPolarHBondContact CZ2-CE1 3.08Å; W64-H68 AromaticContact CZ2-ND1 3.52Å; W64-H68 AromaticContact NE1-CE1 3.73Å; W64-H68 AromaticContact NE1-ND1 3.44Å; W64-H68 PolarHBondContact NE1-ND1 2.82Å; W64-H68 WeakPolarHBondContact O-CB 3.39Å; W64-H68 PolarHBondContact O-N 3.45Å; I65-H68 PolarHBondContact O-N 3.43Å; H68-W70 PolarHBondContact O-N 2.89Å; H68-H71 PolarHBondContact O-N 3.01Å; H68-D72 CarbonylContact O-C 3.52Å; H68-D72 PolarHBondContact O-N 3.43Å
69C90.2Very high89.6Confident59 Ų5996.9 Ų96.940%0.39950%0.497SS..Hα-helixtrans-62.7-30.3177-1720000112.4I65 L66 W67 I76I65-C69 VanDerWaalsContact O-CB 3.26Å; I65-C69 WeakPolarHBondContact O-CB 3.26Å; I65-C69 PolarHBondContact O-N 2.88Å; L66-C69 PolarHBondContact O-N 3.5Å; W67-C69 PolarHBondContact O-N 3.06Å; C69-I76 HydrophobicContact CB-CD1 4.02Å
70W90.8Very high89Confident197 Ų197103.6 Ų103.675%0.74652%0.515SS*.Hα-helixtrans-82.6-40.8176.4-173.973.6000112.8L66 W67 H68L66-W70 PolarHBondContact O-N 2.84Å; W67-W70 PolarHBondContact O-N 3.4Å; H68-W70 PolarHBondContact O-N 2.89Å
71H90.5Very high88.4Confident84 Ų84107 Ų10739%0.38953%0.533SS..Hα-helixtrans-79.7-38.5-176.8-82.9-76.3000113.8W67 H68 P73W67-H71 AromaticContact CD1-CD2 3.66Å; W67-H71 AromaticContact CD1-NE2 3.78Å; W67-H71 AromaticContact CD2-CD2 3.43Å; W67-H71 VanDerWaalsContact CD2-CD2 3.43Å; W67-H71 AromaticContact CE2-CD2 3.05Å; W67-H71 AromaticContact CE2-CG 3.99Å; W67-H71 AromaticContact CE2-NE2 3.28Å; W67-H71 VanDerWaalsContact CE2-NE2 3.28Å; W67-H71 AromaticContact CG-CD2 3.82Å; W67-H71 HydrophobicContact CH2-CB 4.33Å; W67-H71 AromaticContact CH2-CD2 3.91Å; W67-H71 AromaticContact CZ2-CD2 3.33Å; W67-H71 WeakPolarHBondContact CZ2-CD2 3.48Å; W67-H71 AromaticContact CZ2-CG 3.86Å; W67-H71 AromaticContact CZ2-NE2 3.48Å; W67-H71 WeakPolarHBondContact CZ2-NE2 3.33Å; W67-H71 HydrophobicContact CZ3-CB 4.32Å; W67-H71 AromaticContact NE1-CD2 3.21Å; W67-H71 PolarHBondContact NE1-CD2 3.25Å; W67-H71 AromaticContact NE1-NE2 3.05Å; W67-H71 PolarHBondContact NE1-NE2 3.29Å; W67-H71 WeakPolarHBondContact O-CB 3.23Å; W67-H71 PolarHBondContact O-CD2 3.42Å; W67-H71 PolarHBondContact O-N 2.82Å; H68-H71 PolarHBondContact O-N 3.01Å; H71-P73 VanDerWaalsContact C-CD 3.43Å; H71-P73 WeakPolarHBondContact O-CD 3.18Å
72D86.1Confident87.9Confident86 Ų86113.5 Ų113.546%0.4655%0.553SS.*  trans-12862.9-177.7-64.5-54.7000110.8H68 D74 A75H68-D72 CarbonylContact O-C 3.52Å; H68-D72 PolarHBondContact O-N 3.43Å; D72-D74 PolarHBondContact O-N 3.4Å; D72-A75 PolarHBondContact O-N 3.26Å
73P84.4Confident87.4Confident46 Ų46109.9 Ų109.930%0.29955%0.548SS..THydrogen-bonded Turntrans-64.4-25.8179.928.4-35.3000112.2H71 A75 I76 L77H71-P73 VanDerWaalsContact C-CD 3.43Å; H71-P73 WeakPolarHBondContact O-CD 3.18Å; P73-A75 PolarHBondContact O-N 3.33Å; P73-I76 PolarHBondContact O-N 3.21Å; P73-L77 HydrophobicContact CB-CD1 4.39Å; P73-L77 PolarHBondContact O-N 3.05Å
74D79.3Confident86.9Confident86 Ų86107.3 Ų107.346%0.4654%0.54SS..Hα-helixtrans-64.4-28.4-177-60-11.6000112.7D72 I76 G78 H79D72-D74 PolarHBondContact O-N 3.4Å; D74-I76 PolarHBondContact O-N 3.36Å; D74-G78 CarbonylContact O-C 3.11Å; D74-G78 WeakPolarHBondContact O-CA 3.5Å; D74-G78 PolarHBondContact O-N 2.86Å; D74-H79 WeakPolarHBondContact CB-ND1 3.48Å; D74-H79 PolarHBondContact O-N 3.45Å
75A80.1Confident86.3Confident74 Ų74103.1 Ų103.161%0.61254%0.537SS*.Hα-helixtrans-68.8-23.1175.400000112.4D72 P73D72-A75 PolarHBondContact O-N 3.26Å; P73-A75 PolarHBondContact O-N 3.33Å
76I81.3Confident85.7Confident115 Ų115104 Ų10459%0.5955%0.55SS**Hα-helixtrans-97.3-43.5179.9-59173.2000110.6C69 P73 D74C69-I76 HydrophobicContact CB-CD1 4.02Å; P73-I76 PolarHBondContact O-N 3.21Å; D74-I76 PolarHBondContact O-N 3.36Å
77L81.6Confident85.1Confident148 Ų148106 Ų10678%0.77555%0.554SS**Hα-helixtrans-88.9-12.9-175-64175.5000113.4P73P73-L77 HydrophobicContact CB-CD1 4.39Å; P73-L77 PolarHBondContact O-N 3.05Å
78G84.6Confident84.6Confident45 Ų45107.5 Ų107.546%0.46456%0.56SS.*  trans97130.6-174.800000111.3D74 F80D74-G78 CarbonylContact O-C 3.11Å; D74-G78 WeakPolarHBondContact O-CA 3.5Å; D74-G78 PolarHBondContact O-N 2.86Å; G78-F80 VanDerWaalsContact C-N 3.28Å; G78-F80 PolarHBondContact O-N 3.47Å
79H83.4Confident84.2Confident123 Ų123107.5 Ų107.557%0.56957%0.565SS**SBendtrans-69-25.9179.2-67.6-79000113.5D74D74-H79 WeakPolarHBondContact CB-ND1 3.48Å; D74-H79 PolarHBondContact O-N 3.45Å
80F83.9Confident83.9Confident180 Ų180109.5 Ų109.579%0.78957%0.572SS**SBendtrans-127.7139-175.1-65.5-77.8000110.8G78 W82G78-F80 VanDerWaalsContact C-N 3.28Å; G78-F80 PolarHBondContact O-N 3.47Å; F80-W82 PolarHBondContact O-N 2.94Å
81P86.1Confident83.3Confident118 Ų118108.8 Ų108.877%0.76658%0.577SS**PPolyproline II helixtrans-63.9136.917328.5-33.8000109.4
82W84.5Confident82.9Confident236 Ų236112.1 Ų112.189%0.89459%0.592SS**PPolyproline II helixtrans-68.1124.4175.2-172.1-97.4000109.9F80F80-W82 PolarHBondContact O-N 2.94Å
83P85.4Confident82.8Confident69 Ų69112 Ų11245%0.44859%0.591SS.*PPolyproline II helixtrans-68.8138.2-179.527.9-33.2000110.7A85 W88P83-A85 PolarHBondContact O-N 3.22Å; P83-W88 HydrophobicContact CB-CZ2 4.2Å; P83-W88 HydrophobicContact CG-CZ2 4.34Å
84D85.3Confident82.7Confident77 Ų77112.8 Ų112.841%0.41261%0.607SS.*  trans-85.5107173.5-177.2-1.4000109S86 K87D84-S86 VanDerWaalsContact CG-OG 3.28Å; D84-S86 PolarHBondContact O-N 2.71Å; D84-S86 VanDerWaalsContact O-N 3.13Å; D84-S86 PolarHBondContact OD1-N 3.37Å; D84-S86 PolarHBondContact OD1-OG 3.24Å; D84-S86 PolarHBondContact OD2-OG 3.13Å; D84-K87 HydrophobicContact CB-CD 4.09Å; D84-K87 HydrophobicContact CB-CG 4.26Å; D84-K87 PolarHBondContact O-N 3.36Å; D84-K87 VanDerWaalsContact O-N 3.13Å; D84-K87 VanDerWaalsContact OD2-CE 3.29Å; D84-K87 WeakPolarHBondContact OD2-CE 3.28Å; D84-K87 IonicContact OD2-NZ 3.78Å
85A82.3Confident83Confident60 Ų60113 Ų11350%0.49661%0.607SS.*G310 helixtrans-61-21.3-175.500000113.5P83 K87 W88P83-A85 PolarHBondContact O-N 3.22Å; A85-K87 VanDerWaalsContact C-N 3.27Å; A85-K87 PolarHBondContact O-N 3.43Å; A85-W88 HydrophobicContact CB-CE3 4.17Å; A85-W88 HydrophobicContact CB-CZ3 4.12Å
86S79.8Confident83.1Confident99 Ų99113.9 Ų113.969%0.69261%0.607SS**G310 helixtrans-76-12.6179.167.90000114.2D84D84-S86 VanDerWaalsContact CG-OG 3.28Å; D84-S86 PolarHBondContact O-N 2.71Å; D84-S86 VanDerWaalsContact O-N 3.13Å; D84-S86 PolarHBondContact OD1-N 3.37Å; D84-S86 PolarHBondContact OD1-OG 3.24Å; D84-S86 PolarHBondContact OD2-OG 3.13Å
87K82.1Confident83Confident159 Ų159113.1 Ų113.169%0.69161%0.61SS**G310 helixtrans-91.6-8.7178.5-65.5-179.8-175.9163.50113.2D84 A85 T89D84-K87 HydrophobicContact CB-CD 4.09Å; D84-K87 HydrophobicContact CB-CG 4.26Å; D84-K87 PolarHBondContact O-N 3.36Å; D84-K87 VanDerWaalsContact O-N 3.13Å; D84-K87 VanDerWaalsContact OD2-CE 3.29Å; D84-K87 WeakPolarHBondContact OD2-CE 3.28Å; D84-K87 IonicContact OD2-NZ 3.78Å; A85-K87 VanDerWaalsContact C-N 3.27Å; A85-K87 PolarHBondContact O-N 3.43Å; K87-T89 PolarHBondContact O-N 2.93Å
88W84.5Confident82.8Confident126 Ų126113.2 Ų113.248%0.47761%0.611SS.*SBendtrans-70.1129.4174.5-63.4-22.3000108.7P83 A85 L93P83-W88 HydrophobicContact CB-CZ2 4.2Å; P83-W88 HydrophobicContact CG-CZ2 4.34Å; A85-W88 HydrophobicContact CB-CE3 4.17Å; A85-W88 HydrophobicContact CB-CZ3 4.12Å; W88-L93 HydrophobicContact CB-CD1 3.43Å; W88-L93 VanDerWaalsContact CB-CD1 3.43Å; W88-L93 HydrophobicContact CB-CG 4.17Å; W88-L93 HydrophobicContact CE3-CD2 4.3Å
89T83.1Confident82Confident71 Ų71118.2 Ų118.244%0.43663%0.627SS.*  trans-78.5146.4-178.8560000109.8K87 E91 E92 L93K87-T89 PolarHBondContact O-N 2.93Å; T89-E91 PolarHBondContact O-N 3.38Å; T89-E91 VanDerWaalsContact O-N 3.08Å; T89-E92 PolarHBondContact O-N 3.46Å; T89-E92 WeakPolarHBondContact OG1-CG 3.29Å; T89-L93 WeakPolarHBondContact O-CD1 3.44Å; T89-L93 PolarHBondContact O-N 3.04Å
90D82.9Confident81Confident101 Ų101120.9 Ų120.954%0.5464%0.64SS.*Hα-helixtrans-57.1-26.9178.4-63.5-40.1000112.2L93 G94 I95D90-L93 CarbonylContact O-C 3.57Å; D90-L93 PolarHBondContact O-N 2.84Å; D90-G94 PolarHBondContact O-N 2.86Å; D90-I95 HydrophobicContact CB-CB 4.12Å; D90-I95 PolarHBondContact O-N 3.49Å
91E77.7Confident79.5Confident182 Ų182125.4 Ų125.485%0.8566%0.663SS**Hα-helixtrans-64.5-42.9171.4-171.6-177.617900113.1T89 G94T89-E91 PolarHBondContact O-N 3.38Å; T89-E91 VanDerWaalsContact O-N 3.08Å; E91-G94 PolarHBondContact O-N 3.08Å
92E82.6Confident79.2Confident153 Ų153125.8 Ų125.872%0.71566%0.658SS**Hα-helixtrans-72.5-31.6176.3-72.3178.6177.900112.1T89 G94T89-E92 PolarHBondContact O-N 3.46Å; T89-E92 WeakPolarHBondContact OG1-CG 3.29Å; E92-G94 VanDerWaalsContact C-N 3.28Å
93L83.3Confident78.9Confident85 Ų85119.9 Ų119.945%0.44565%0.646SS.*Hα-helixtrans-80.2-9.6175.4-78.1136.7000113.1W88 T89 D90 I95W88-L93 HydrophobicContact CB-CD1 3.43Å; W88-L93 VanDerWaalsContact CB-CD1 3.43Å; W88-L93 HydrophobicContact CB-CG 4.17Å; W88-L93 HydrophobicContact CE3-CD2 4.3Å; T89-L93 WeakPolarHBondContact O-CD1 3.44Å; T89-L93 PolarHBondContact O-N 3.04Å; D90-L93 CarbonylContact O-C 3.57Å; D90-L93 PolarHBondContact O-N 2.84Å; L93-I95 HydrophobicContact CB-CD1 3.87Å; L93-I95 HydrophobicContact CB-CG1 3.9Å; L93-I95 PolarHBondContact O-N 3.32Å
94G83.9Confident78.6Confident61 Ų61122.8 Ų122.863%0.62966%0.657SS**THydrogen-bonded Turntrans64.327.2-177.400000113.3D90 E91 E92 P96D90-G94 PolarHBondContact O-N 2.86Å; E91-G94 PolarHBondContact O-N 3.08Å; E92-G94 VanDerWaalsContact C-N 3.28Å; G94-P96 VanDerWaalsContact O-CD 3.28Å; G94-P96 WeakPolarHBondContact O-CD 3.39Å
95I84.5Confident78.2Confident90 Ų90125.5 Ų125.546%0.46267%0.671SS.*  trans-84109.9175.9-59.2171.2000106.4D90 L93D90-I95 HydrophobicContact CB-CB 4.12Å; D90-I95 PolarHBondContact O-N 3.49Å; L93-I95 HydrophobicContact CB-CD1 3.87Å; L93-I95 HydrophobicContact CB-CG1 3.9Å; L93-I95 PolarHBondContact O-N 3.32Å
96P82.1Confident77.9Confident94 Ų94129.6 Ų129.661%0.6168%0.682SS**  trans-62.4143.5176.725.6-31.3000109.5G94 D98G94-P96 VanDerWaalsContact O-CD 3.28Å; G94-P96 WeakPolarHBondContact O-CD 3.39Å; P96-D98 PolarHBondContact O-N 2.92Å
97P80.4Confident77.8Confident99 Ų99131.6 Ų131.664%0.64368%0.681SS**  trans-59.6131.6169.226.3-32000108.3D99P97-D99 PolarHBondContact O-N 3.13Å
98D75.9Confident77.5Confident149 Ų149129.6 Ų129.680%0.79768%0.681SS**  trans-70.185.3171.1-72.9-26.3000107.6P96 E100P96-D98 PolarHBondContact O-N 2.92Å; D98-E100 PolarHBondContact O-N 2.91Å
99D67.4Low76.9Confident151 Ų151129.9 Ų129.981%0.80770%0.696SS**  trans-70.980168.7-70.2-27.3000108.4P97P97-D99 PolarHBondContact O-N 3.13Å
100E62.8Low76.4Confident179 Ų179134.8 Ų134.884%0.83672%0.718SS**  trans-10999164.5-70-167.517200110.2D98D98-E100 PolarHBondContact O-N 2.91Å
101E53.5Low75.8Confident274 Ų274137.9 Ų137.9100%1.2873%0.734SS**  trans65.60157.3-155.9158.1-16000120.9

Retrieved 101 of 101 residues in 71.4 ms (Link to these results)