A0A093J3Y3_STRCA Loading...

Cytochrome c oxidase assembly factor 6 homolog

Involved in the maturation of the mitochondrial respiratory chain complex IV subunit MT-CO2/COX2. Thereby, may regulate early steps of complex IV assembly. Mitochondrial respiratory chain complex IV or cytochrome c oxidase is the component of the respiratory chain that catalyzes the transfer of electrons from intermembrane space cytochrome c to molecular oxygen in the matrix and as a consequence contributes to the proton gradient involved in mitochondrial ATP synthesis. May also be required for efficient formation of respiratory supercomplexes comprised of complexes III and IV.

AlphaFold DB , UniProt , Accession A0A093J3Y3, Species STRCA (Struthio camelus australis), Gene n/a, Length 79 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M59.4Low88.7Confident235 Ų235112.6 Ų112.6100%1.15860%0.604SS**  0125.40-73.6-172.3169.800107.7
2S77Confident89.4Confident121 Ų121103.3 Ų103.385%0.84656%0.555SS**PPolyproline II helixtrans-75.4150.3179.6-50.20000110.5
3A83.1Confident89.9Confident90 Ų90104.2 Ų104.274%0.74455%0.545SS*.PPolyproline II helixtrans-65133.6173.300000109.7
4P88.2Confident90.5Very high28 Ų2899 Ų9918%0.18253%0.529CS..PPolyproline II helixtrans-66.1145.9-179.325.2-32.7000111.3E8 R9 P45 W48P4-E8 WeakPolarHBondContact CA-OE2 3.48Å; P4-E8 HydrophobicContact CB-CB 4Å; P4-R9 HydrophobicContact CB-CG 4.26Å; P4-R9 HydrophobicContact CG-CG 4.06Å; P4-R9 PolarHBondContact O-NH1 2.89Å; P4-P45 HydrophobicContact CG-CG 4.32Å; P4-W48 HydrophobicContact CG-CH2 4.21Å; P4-W48 HydrophobicContact CG-CZ2 4.26Å
5T94.8Very high91Very high74 Ų7492.7 Ų92.745%0.45450%0.497SS..PPolyproline II helixtrans-67.7169.2176.872.70000111.7E7 E8 R9T5-E7 VanDerWaalsContact C-N 3.26Å; T5-E7 PolarHBondContact O-N 2.85Å; T5-E7 PolarHBondContact OG1-N 2.89Å; T5-E8 PolarHBondContact N-OE2 2.57Å; T5-E8 PolarHBondContact O-N 2.72Å; T5-E8 WeakPolarHBondContact OG1-CG 3.28Å; T5-E8 PolarHBondContact OG1-N 3.05Å; T5-E8 PolarHBondContact OG1-OE2 3.02Å; T5-R9 VanDerWaalsContact O-CG 3.27Å; T5-R9 WeakPolarHBondContact O-CG 3.25Å; T5-R9 PolarHBondContact O-N 3.22Å
6M94.3Very high91.4Very high139 Ų13989.7 Ų89.769%0.68548%0.476SS*.Hα-helixtrans-58.8-39.9175.7-171.7-179.287.700112.3R9 K10M6-R9 PolarHBondContact O-N 3.33Å; M6-K10 PolarHBondContact O-N 3.16Å
7E95.3Very high91.8Very high154 Ų15489.1 Ų89.172%0.7247%0.473SS*.Hα-helixtrans-69-43-178.8-62.6-176.2146.400111.4T5 R9 K10 A11T5-E7 VanDerWaalsContact C-N 3.26Å; T5-E7 PolarHBondContact O-N 2.85Å; T5-E7 PolarHBondContact OG1-N 2.89Å; E7-R9 VanDerWaalsContact C-N 3.32Å; E7-R9 PolarHBondContact O-N 3.05Å; E7-K10 PolarHBondContact O-N 3.35Å; E7-A11 WeakPolarHBondContact O-CB 3.32Å; E7-A11 PolarHBondContact O-N 3.28Å
8E94.6Very high92.1Very high104 Ų10490 Ų9049%0.48647%0.474SS..Hα-helixtrans-61.6-41174.8-70.6173.1148.700111.4P4 T5 K10 A11 C12P4-E8 WeakPolarHBondContact CA-OE2 3.48Å; P4-E8 HydrophobicContact CB-CB 4Å; T5-E8 PolarHBondContact N-OE2 2.57Å; T5-E8 PolarHBondContact O-N 2.72Å; T5-E8 WeakPolarHBondContact OG1-CG 3.28Å; T5-E8 PolarHBondContact OG1-N 3.05Å; T5-E8 PolarHBondContact OG1-OE2 3.02Å; E8-K10 PolarHBondContact O-N 3.43Å; E8-A11 PolarHBondContact O-N 2.9Å; E8-C12 VanDerWaalsContact O-CB 3.31Å; E8-C12 WeakPolarHBondContact O-CB 3.11Å; E8-C12 PolarHBondContact O-N 3.39Å
9R95.5Very high92.5Very high92 Ų9285.8 Ų85.835%0.34745%0.452SS..Hα-helixtrans-61.4-44.6174.4-69.6-169.4-64-101.511.3111.8P4 T5 M6 E7 C12 W13 W48P4-R9 HydrophobicContact CB-CG 4.26Å; P4-R9 HydrophobicContact CG-CG 4.06Å; P4-R9 PolarHBondContact O-NH1 2.89Å; T5-R9 VanDerWaalsContact O-CG 3.27Å; T5-R9 WeakPolarHBondContact O-CG 3.25Å; T5-R9 PolarHBondContact O-N 3.22Å; M6-R9 PolarHBondContact O-N 3.33Å; E7-R9 VanDerWaalsContact C-N 3.32Å; E7-R9 PolarHBondContact O-N 3.05Å; R9-C12 PolarHBondContact O-N 3.36Å; R9-W13 PolarHBondContact O-N 3.45Å; R9-W48 HydrophobicContact CB-CH2 4.39Å; R9-W48 HydrophobicContact CB-CZ3 4.3Å; R9-W48 HydrophobicContact CG-CH2 3.52Å; R9-W48 HydrophobicContact CG-CZ3 3.81Å
10K96.5Very high92.7Very high164 Ų16483.3 Ų83.371%0.71344%0.436SS*.Hα-helixtrans-63.2-44.4178.2-171.4179.4179.6-177.20111.3M6 E7 E8 W13 G14M6-K10 PolarHBondContact O-N 3.16Å; E7-K10 PolarHBondContact O-N 3.35Å; E8-K10 PolarHBondContact O-N 3.43Å; K10-W13 PolarHBondContact O-N 3.31Å; K10-G14 PolarHBondContact O-N 2.71Å
11A96.8Very high92.9Very high38 Ų3884.3 Ų84.331%0.31444%0.438SS..Hα-helixtrans-62.7-42.1176.800000112.1E7 E8 G14 A15E7-A11 WeakPolarHBondContact O-CB 3.32Å; E7-A11 PolarHBondContact O-N 3.28Å; E8-A11 PolarHBondContact O-N 2.9Å; A11-G14 PolarHBondContact O-N 2.94Å; A11-A15 PolarHBondContact O-N 3.14Å
12C97.3Very high94.8Very high1 Ų174 Ų741%0.00739%0.389CS..Hα-helixtrans-61.2-50.5175.4168.10000112E8 R9 G14 A15 R16 C44E8-C12 VanDerWaalsContact O-CB 3.31Å; E8-C12 WeakPolarHBondContact O-CB 3.11Å; E8-C12 PolarHBondContact O-N 3.39Å; R9-C12 PolarHBondContact O-N 3.36Å; C12-G14 VanDerWaalsContact C-N 3.33Å; C12-G14 PolarHBondContact O-N 3.42Å; C12-A15 PolarHBondContact O-N 3.24Å; C12-R16 PolarHBondContact O-N 2.04Å; C12-C44 VanDerWaalsContact C-SG 3.57Å; C12-C44 WeakPolarHBondContact CA-SG 3.39Å; C12-C44 HydrophobicContact CB-CB 4.06Å; C12-C44 WeakPolarHBondContact CB-SG 3.4Å; C12-C44 PolarHBondContact O-SG 3.28Å; C12-C44 VanDerWaalsContact O-SG 3.36Å; C12-C44 VanDerWaalsContact SG-CA 3.57Å; C12-C44 WeakPolarHBondContact SG-CB 3.37Å; C12-C44 CovalentContact SG-SG 2.02Å; C12-C44 PolarHBondContact SG-SG 2.93Å
13W96Very high95.7Very high115 Ų11568.8 Ų68.844%0.43635%0.352SS..Hα-helixtrans-65.4-36.4179.8-63.5-9.2000112.4R9 K10 R16 D17 W48 F52R9-W13 PolarHBondContact O-N 3.45Å; K10-W13 PolarHBondContact O-N 3.31Å; W13-R16 WeakPolarHBondContact O-CB 3.27Å; W13-R16 PolarHBondContact O-N 3.01Å; W13-D17 PolarHBondContact O-N 3.25Å; W13-W48 AromaticContact NE1-CZ3 3.55Å; W13-F52 AromaticContact CD1-CZ 3.79Å; W13-F52 AromaticContact NE1-CZ 3.66Å
14G97.8Very high96.3Very high31 Ų3169.4 Ų69.432%0.3234%0.343SS..Hα-helixtrans-60.3-49.217300000112.4K10 A11 C12 R16 D17 E18K10-G14 PolarHBondContact O-N 2.71Å; A11-G14 PolarHBondContact O-N 2.94Å; C12-G14 VanDerWaalsContact C-N 3.33Å; C12-G14 PolarHBondContact O-N 3.42Å; G14-R16 VanDerWaalsContact C-N 3.31Å; G14-R16 PolarHBondContact O-N 3.27Å; G14-D17 PolarHBondContact O-N 2.71Å; G14-D17 VanDerWaalsContact O-N 3.14Å; G14-E18 WeakPolarHBondContact O-CG 3.4Å; G14-E18 PolarHBondContact O-N 3.25Å
15A97.9Very high96.7Very high5 Ų575.1 Ų75.14%0.04136%0.364CS..Hα-helixtrans-64.3-35.1178.100000112.8A11 C12 F19 F40 R43A11-A15 PolarHBondContact O-N 3.14Å; C12-A15 PolarHBondContact O-N 3.24Å; A15-F19 WeakPolarHBondContact O-CB 3.38Å; A15-F19 PolarHBondContact O-N 3.02Å; A15-F40 HydrophobicContact CB-CB 4.41Å; A15-R43 HydrophobicContact CB-CB 4.4Å
16R98.1Very high96.8Very high44 Ų4474 Ų7417%0.16636%0.356CS..Hα-helixtrans-58.2-50.9170.9-179.7-159.965.9-154-3.8110.6C12 W13 G14 F19 W20 F40 F52C12-R16 PolarHBondContact O-N 2.04Å; W13-R16 WeakPolarHBondContact O-CB 3.27Å; W13-R16 PolarHBondContact O-N 3.01Å; G14-R16 VanDerWaalsContact C-N 3.31Å; G14-R16 PolarHBondContact O-N 3.27Å; R16-F19 PolarHBondContact O-N 3.11Å; R16-W20 HydrophobicContact CG-CD2 4.23Å; R16-W20 HydrophobicContact CG-CG 4.36Å; R16-W20 HydrophobicContact CG-CZ2 4.2Å; R16-W20 VanDerWaalsContact O-CB 3.32Å; R16-W20 WeakPolarHBondContact O-CB 3.31Å; R16-W20 VanDerWaalsContact O-CD1 3.29Å; R16-W20 PolarHBondContact O-N 3.23Å; R16-F40 HydrophobicContact CB-CD2 3.8Å; R16-F40 HydrophobicContact CB-CE2 3.53Å; R16-F40 HydrophobicContact CB-CZ 4.23Å; R16-F40 HydrophobicContact CG-CE2 3.92Å; R16-F40 HydrophobicContact CG-CZ 4.1Å; R16-F52 HydrophobicContact CG-CB 4.5Å; R16-F52 HydrophobicContact CG-CD2 4.45Å; R16-F52 HydrophobicContact CG-CG 4.41Å
17D98Very high96.7Very high79 Ų7972.8 Ų72.842%0.42236%0.361SS..Hα-helixtrans-66.9-39.7-174-67.6-12.8000111.4W13 G14 W20 Q21W13-D17 PolarHBondContact O-N 3.25Å; G14-D17 PolarHBondContact O-N 2.71Å; G14-D17 VanDerWaalsContact O-N 3.14Å; D17-W20 PolarHBondContact O-N 2.96Å; D17-Q21 VanDerWaalsContact O-CB 3.31Å; D17-Q21 WeakPolarHBondContact O-CB 3.25Å; D17-Q21 PolarHBondContact O-N 2.88Å
18E98Very high96.6Very high106 Ų10668.5 Ų68.550%0.49534%0.341SS..Hα-helixtrans-61-48172.5-71.6175.5-174.100112.1G14 W20 Q21 C22 L36G14-E18 WeakPolarHBondContact O-CG 3.4Å; G14-E18 PolarHBondContact O-N 3.25Å; E18-W20 VanDerWaalsContact C-N 3.3Å; E18-W20 PolarHBondContact O-N 3.24Å; E18-Q21 PolarHBondContact O-N 3.34Å; E18-C22 PolarHBondContact O-N 3.44Å; E18-L36 HydrophobicContact CB-CD2 4.27Å
19F98.1Very high96.5Very high10 Ų1066.2 Ų66.24%0.04433%0.332CS..Hα-helixtrans-60.1-43.8176.4173-122.6000111.2A15 R16 C22 L23 C33 L36 R37 F40A15-F19 WeakPolarHBondContact O-CB 3.38Å; A15-F19 PolarHBondContact O-N 3.02Å; R16-F19 PolarHBondContact O-N 3.11Å; F19-C22 WeakPolarHBondContact O-CB 3.46Å; F19-C22 PolarHBondContact O-N 3.02Å; F19-L23 HydrophobicContact CD1-CD1 4.32Å; F19-L23 HydrophobicContact CD2-CG 4.44Å; F19-L23 HydrophobicContact CE1-CD1 3.69Å; F19-L23 HydrophobicContact CE1-CG 4.48Å; F19-L23 HydrophobicContact CE2-CD1 4.02Å; F19-L23 HydrophobicContact CE2-CD2 4.13Å; F19-L23 HydrophobicContact CE2-CG 3.95Å; F19-L23 HydrophobicContact CZ-CD1 3.52Å; F19-L23 HydrophobicContact CZ-CD2 4.2Å; F19-L23 HydrophobicContact CZ-CG 3.98Å; F19-L23 PolarHBondContact O-N 3.48Å; F19-L23 VanDerWaalsContact O-N 3.08Å; F19-C33 HydrophobicContact CD2-CB 3.95Å; F19-C33 HydrophobicContact CE2-CB 3.8Å; F19-L36 HydrophobicContact CB-CB 4.1Å; F19-L36 HydrophobicContact CD2-CB 4.12Å; F19-R37 HydrophobicContact CD2-CB 4.06Å; F19-R37 HydrophobicContact CE2-CB 3.7Å; F19-R37 HydrophobicContact CE2-CG 4.39Å; F19-R37 HydrophobicContact CZ-CB 4.15Å; F19-R37 HydrophobicContact CZ-CG 4.35Å; F19-F40 HydrophobicContact CB-CB 4.34Å; F19-F40 AromaticContact CD1-CD1 3.83Å; F19-F40 HydrophobicContact CD1-CD1 3.83Å; F19-F40 HydrophobicContact CD1-CE1 4.36Å; F19-F40 HydrophobicContact CE1-CD1 4.36Å
20W97.4Very high96.2Very high36 Ų3663.9 Ų63.914%0.13633%0.333CS..Hα-helixtrans-66.5-41.7-179.4-8225.4000113R16 D17 E18 C22 L23 D24 F52 R56 L59R16-W20 HydrophobicContact CG-CD2 4.23Å; R16-W20 HydrophobicContact CG-CG 4.36Å; R16-W20 HydrophobicContact CG-CZ2 4.2Å; R16-W20 VanDerWaalsContact O-CB 3.32Å; R16-W20 WeakPolarHBondContact O-CB 3.31Å; R16-W20 VanDerWaalsContact O-CD1 3.29Å; R16-W20 PolarHBondContact O-N 3.23Å; D17-W20 PolarHBondContact O-N 2.96Å; E18-W20 VanDerWaalsContact C-N 3.3Å; E18-W20 PolarHBondContact O-N 3.24Å; W20-C22 VanDerWaalsContact C-N 3.27Å; W20-C22 PolarHBondContact O-N 3.4Å; W20-L23 PolarHBondContact O-N 3.04Å; W20-D24 VanDerWaalsContact O-CG 3.3Å; W20-D24 PolarHBondContact O-N 2.8Å; W20-F52 HydrophobicContact CZ2-CB 4.08Å; W20-F52 VanDerWaalsContact CZ2-O 3.25Å; W20-F52 WeakPolarHBondContact CZ2-O 3.25Å; W20-R56 HydrophobicContact CD2-CB 4.44Å; W20-R56 HydrophobicContact CD2-CG 4.16Å; W20-R56 HydrophobicContact CE3-CG 4.39Å; W20-R56 HydrophobicContact CH2-CB 3.85Å; W20-R56 HydrophobicContact CH2-CG 4.39Å; W20-R56 HydrophobicContact CZ2-CB 3.54Å; W20-R56 HydrophobicContact CZ2-CG 4.17Å; W20-R56 HydrophobicContact CZ3-CB 4.41Å; W20-R56 HydrophobicContact CZ3-CG 4.49Å; W20-R56 PolarHBondContact O-NH1 3.31Å; W20-R56 PolarHBondContact O-NH2 3.05Å; W20-L59 HydrophobicContact CH2-CD1 4.39Å; W20-L59 HydrophobicContact CZ3-CD1 4.09Å
21Q97.4Very high96.1Very high105 Ų10560 Ų6049%0.49133%0.326SS..Hα-helixtrans-63.2-36.4175-169.4-171.625.300111.3D17 E18 D24 K25D17-Q21 VanDerWaalsContact O-CB 3.31Å; D17-Q21 WeakPolarHBondContact O-CB 3.25Å; D17-Q21 PolarHBondContact O-N 2.88Å; E18-Q21 PolarHBondContact O-N 3.34Å; Q21-D24 PolarHBondContact O-N 3.46Å; Q21-K25 HydrophobicContact CG-CD 4.38Å; Q21-K25 WeakPolarHBondContact O-CB 3.49Å; Q21-K25 VanDerWaalsContact O-CG 3.31Å; Q21-K25 WeakPolarHBondContact O-CG 3.44Å; Q21-K25 PolarHBondContact O-N 3.13Å; Q21-K25 VanDerWaalsContact O-N 3.07Å
22C98Very high96Very high19 Ų1964.5 Ų64.513%0.12834%0.339CS..Hα-helixtrans-62.4-46.3174.1-179.30000111.5E18 F19 W20 D24 K25 N26 C33 L36E18-C22 PolarHBondContact O-N 3.44Å; F19-C22 WeakPolarHBondContact O-CB 3.46Å; F19-C22 PolarHBondContact O-N 3.02Å; W20-C22 VanDerWaalsContact C-N 3.27Å; W20-C22 PolarHBondContact O-N 3.4Å; C22-D24 PolarHBondContact O-N 2.99Å; C22-K25 PolarHBondContact O-N 2.8Å; C22-N26 WeakPolarHBondContact O-CB 3.06Å; C22-N26 PolarHBondContact O-N 3.29Å; C22-N26 PolarHBondContact O-ND2 2.81Å; C22-C33 HydrophobicContact CB-CB 3.89Å; C22-C33 WeakPolarHBondContact CB-SG 3.4Å; C22-C33 VanDerWaalsContact SG-CA 3.56Å; C22-C33 WeakPolarHBondContact SG-CB 3.4Å; C22-C33 CovalentContact SG-SG 2.04Å; C22-C33 PolarHBondContact SG-SG 2.93Å; C22-L36 HydrophobicContact CB-CD1 3.47Å; C22-L36 VanDerWaalsContact CB-CD1 3.47Å
23L97.1Very high96Very high10 Ų1064.5 Ų64.55%0.05234%0.339CS..Hα-helixtrans-61.2-43.7177.4-71.3176.8000111.8F19 W20 K25 N26 S27 E28 A30 C33F19-L23 HydrophobicContact CD1-CD1 4.32Å; F19-L23 HydrophobicContact CD2-CG 4.44Å; F19-L23 HydrophobicContact CE1-CD1 3.69Å; F19-L23 HydrophobicContact CE1-CG 4.48Å; F19-L23 HydrophobicContact CE2-CD1 4.02Å; F19-L23 HydrophobicContact CE2-CD2 4.13Å; F19-L23 HydrophobicContact CE2-CG 3.95Å; F19-L23 HydrophobicContact CZ-CD1 3.52Å; F19-L23 HydrophobicContact CZ-CD2 4.2Å; F19-L23 HydrophobicContact CZ-CG 3.98Å; F19-L23 PolarHBondContact O-N 3.48Å; F19-L23 VanDerWaalsContact O-N 3.08Å; W20-L23 PolarHBondContact O-N 3.04Å; L23-K25 VanDerWaalsContact C-N 3.31Å; L23-K25 PolarHBondContact O-N 3.17Å; L23-N26 CarbonylContact O-C 3.58Å; L23-N26 PolarHBondContact O-N 3.38Å; L23-N26 VanDerWaalsContact O-N 3.13Å; L23-S27 PolarHBondContact O-N 2.7Å; L23-E28 PolarHBondContact O-N 2.86Å; L23-A30 HydrophobicContact CD2-CB 4.03Å; L23-C33 HydrophobicContact CD2-CB 4.29Å
24D95.6Very high96.1Very high104 Ų10464 Ų6456%0.55634%0.341SS*.Hα-helixtrans-59.6-42.2177.6-66.9-18.9000111.5W20 Q21 C22 N26 R56W20-D24 VanDerWaalsContact O-CG 3.3Å; W20-D24 PolarHBondContact O-N 2.8Å; Q21-D24 PolarHBondContact O-N 3.46Å; C22-D24 PolarHBondContact O-N 2.99Å; D24-N26 VanDerWaalsContact C-N 3.31Å; D24-N26 PolarHBondContact O-N 3.27Å; D24-R56 IonicContact OD1-CZ 3.69Å; D24-R56 IonicContact OD1-NH1 3.25Å; D24-R56 IonicContact OD1-NH2 3.27Å; D24-R56 PolarHBondContact OD1-NH2 2.99Å
25K96.8Very high96Very high147 Ų14771.7 Ų71.764%0.63937%0.366SS*.Hα-helixtrans-69.9-25.6178.1-74.1174.1179.4172.90113.6Q21 C22 L23Q21-K25 HydrophobicContact CG-CD 4.38Å; Q21-K25 WeakPolarHBondContact O-CB 3.49Å; Q21-K25 VanDerWaalsContact O-CG 3.31Å; Q21-K25 WeakPolarHBondContact O-CG 3.44Å; Q21-K25 PolarHBondContact O-N 3.13Å; Q21-K25 VanDerWaalsContact O-N 3.07Å; C22-K25 PolarHBondContact O-N 2.8Å; L23-K25 VanDerWaalsContact C-N 3.31Å; L23-K25 PolarHBondContact O-N 3.17Å
26N95.8Very high96Very high50 Ų5074 Ų7427%0.26738%0.377SS..THydrogen-bonded Turntrans-109.622.2-174.3-70.3-81.1000112.8C22 L23 D24 E28 D29 K32C22-N26 WeakPolarHBondContact O-CB 3.06Å; C22-N26 PolarHBondContact O-N 3.29Å; C22-N26 PolarHBondContact O-ND2 2.81Å; L23-N26 CarbonylContact O-C 3.58Å; L23-N26 PolarHBondContact O-N 3.38Å; L23-N26 VanDerWaalsContact O-N 3.13Å; D24-N26 VanDerWaalsContact C-N 3.31Å; D24-N26 PolarHBondContact O-N 3.27Å; N26-E28 VanDerWaalsContact C-N 3.26Å; N26-E28 PolarHBondContact O-N 3.02Å; N26-D29 HydrophobicContact CB-CB 4.39Å; N26-D29 VanDerWaalsContact O-CB 3.25Å; N26-D29 WeakPolarHBondContact O-CB 3.06Å; N26-D29 PolarHBondContact O-N 3.17Å; N26-K32 HydrophobicContact CB-CB 4.41Å; N26-K32 HydrophobicContact CB-CD 4.13Å; N26-K32 VanDerWaalsContact OD1-CD 3.27Å; N26-K32 WeakPolarHBondContact OD1-CD 3.48Å
27S93.1Very high96Very high114 Ų11473.7 Ų73.780%0.79738%0.376SS*.THydrogen-bonded Turntrans53.842.6178-53.80000113L23 D29L23-S27 PolarHBondContact O-N 2.7Å; S27-D29 VanDerWaalsContact C-N 3.25Å; S27-D29 PolarHBondContact O-N 3.17Å
28E92.1Very high95.9Very high65 Ų6573.1 Ų73.130%0.30438%0.378SS..THydrogen-bonded Turntrans67.414.1-179-50.8-63.612300115.8L23 N26 A30 R56 K60L23-E28 PolarHBondContact O-N 2.86Å; N26-E28 VanDerWaalsContact C-N 3.26Å; N26-E28 PolarHBondContact O-N 3.02Å; E28-A30 PolarHBondContact O-N 3.34Å; E28-R56 IonicContact OE1-CZ 2.7Å; E28-R56 IonicContact OE1-NH2 3.37Å; E28-R56 PolarHBondContact OE1-NH2 2.8Å; E28-R56 IonicContact OE2-CZ 2.71Å; E28-R56 IonicContact OE2-NE 2.81Å; E28-R56 PolarHBondContact OE2-NE 3.41Å; E28-R56 IonicContact OE2-NH2 3.11Å; E28-R56 PolarHBondContact OE2-NH2 3.46Å; E28-K60 VanDerWaalsContact CD-NZ 3.31Å; E28-K60 WeakPolarHBondContact OE2-CD 3.31Å; E28-K60 VanDerWaalsContact OE2-CE 3.25Å; E28-K60 WeakPolarHBondContact OE2-CE 3.32Å; E28-K60 IonicContact OE2-NZ 2.71Å; E28-K60 PolarHBondContact OE2-NZ 2.89Å
29D92.4Very high95.9Very high56 Ų5669.4 Ų69.430%0.29936%0.364SS..  trans-73.993.7174.1-174.8-4.2000111.6N26 S27 S31 K32N26-D29 HydrophobicContact CB-CB 4.39Å; N26-D29 VanDerWaalsContact O-CB 3.25Å; N26-D29 WeakPolarHBondContact O-CB 3.06Å; N26-D29 PolarHBondContact O-N 3.17Å; S27-D29 VanDerWaalsContact C-N 3.25Å; S27-D29 PolarHBondContact O-N 3.17Å; D29-S31 PolarHBondContact O-N 2.89Å; D29-S31 VanDerWaalsContact OD1-CB 3.28Å; D29-S31 WeakPolarHBondContact OD1-CB 3.48Å; D29-S31 PolarHBondContact OD1-N 3.03Å; D29-S31 PolarHBondContact OD1-OG 3.42Å; D29-S31 PolarHBondContact OD2-OG 3.45Å; D29-K32 HydrophobicContact CB-CD 4.3Å; D29-K32 PolarHBondContact O-N 3.06Å; D29-K32 WeakPolarHBondContact OD2-CD 3.15Å; D29-K32 WeakPolarHBondContact OD2-CE 3.4Å; D29-K32 IonicContact OD2-NZ 3.54Å
30A90.5Very high95.9Very high43 Ų4369 Ų6936%0.35536%0.362SS..THydrogen-bonded Turntrans-64.6-18.9179.200000113.9L23 E28 K32 C33 Q34L23-A30 HydrophobicContact CD2-CB 4.03Å; E28-A30 PolarHBondContact O-N 3.34Å; A30-K32 VanDerWaalsContact C-N 3.29Å; A30-K32 PolarHBondContact O-N 2.92Å; A30-C33 PolarHBondContact O-N 3.43Å; A30-Q34 PolarHBondContact O-N 3.5Å; A30-Q34 PolarHBondContact O-NE2 3.2Å; A30-Q34 VanDerWaalsContact O-NE2 3.16Å
31S94.3Very high95.8Very high82 Ų8271.7 Ų71.757%0.57338%0.376SS*.THydrogen-bonded Turntrans-66.7-34178.575.80000111.6D29 C33 Q34D29-S31 PolarHBondContact O-N 2.89Å; D29-S31 VanDerWaalsContact OD1-CB 3.28Å; D29-S31 WeakPolarHBondContact OD1-CB 3.48Å; D29-S31 PolarHBondContact OD1-N 3.03Å; D29-S31 PolarHBondContact OD1-OG 3.42Å; D29-S31 PolarHBondContact OD2-OG 3.45Å; S31-C33 VanDerWaalsContact C-N 3.27Å; S31-C33 PolarHBondContact O-N 3.19Å; S31-Q34 VanDerWaalsContact O-CG 3.31Å; S31-Q34 WeakPolarHBondContact O-CG 3.49Å
32K95.2Very high95.8Very high133 Ų13371.1 Ų71.158%0.57838%0.384SS*.THydrogen-bonded Turntrans-75.1-18.1177.4-66.2177.5-177.1164.30113.2N26 D29 A30N26-K32 HydrophobicContact CB-CB 4.41Å; N26-K32 HydrophobicContact CB-CD 4.13Å; N26-K32 VanDerWaalsContact OD1-CD 3.27Å; N26-K32 WeakPolarHBondContact OD1-CD 3.48Å; D29-K32 HydrophobicContact CB-CD 4.3Å; D29-K32 PolarHBondContact O-N 3.06Å; D29-K32 WeakPolarHBondContact OD2-CD 3.15Å; D29-K32 WeakPolarHBondContact OD2-CE 3.4Å; D29-K32 IonicContact OD2-NZ 3.54Å; A30-K32 VanDerWaalsContact C-N 3.29Å; A30-K32 PolarHBondContact O-N 2.92Å
33C97.1Very high95.7Very high1 Ų177 Ų771%0.00740%0.403CS..THydrogen-bonded Turntrans-109.212.9-175.2-56.10000113.5F19 C22 L23 A30 S31 K35 L36 R37F19-C33 HydrophobicContact CD2-CB 3.95Å; F19-C33 HydrophobicContact CE2-CB 3.8Å; C22-C33 HydrophobicContact CB-CB 3.89Å; C22-C33 WeakPolarHBondContact CB-SG 3.4Å; C22-C33 VanDerWaalsContact SG-CA 3.56Å; C22-C33 WeakPolarHBondContact SG-CB 3.4Å; C22-C33 CovalentContact SG-SG 2.04Å; C22-C33 PolarHBondContact SG-SG 2.93Å; L23-C33 HydrophobicContact CD2-CB 4.29Å; A30-C33 PolarHBondContact O-N 3.43Å; S31-C33 VanDerWaalsContact C-N 3.27Å; S31-C33 PolarHBondContact O-N 3.19Å; C33-K35 VanDerWaalsContact C-N 3.33Å; C33-K35 PolarHBondContact O-N 3.42Å; C33-L36 PolarHBondContact O-N 3.15Å; C33-R37 PolarHBondContact O-N 3.32Å
34Q97.1Very high95.6Very high105 Ų10577 Ų7749%0.49140%0.404SS..Hα-helixtrans-54.1-42.6-175.5-74.9-65.9-44.100113.8A30 S31 L36 R37 S38A30-Q34 PolarHBondContact O-N 3.5Å; A30-Q34 PolarHBondContact O-NE2 3.2Å; A30-Q34 VanDerWaalsContact O-NE2 3.16Å; S31-Q34 VanDerWaalsContact O-CG 3.31Å; S31-Q34 WeakPolarHBondContact O-CG 3.49Å; Q34-L36 VanDerWaalsContact C-N 3.32Å; Q34-L36 PolarHBondContact O-N 2.91Å; Q34-R37 WeakPolarHBondContact O-CB 3.49Å; Q34-R37 PolarHBondContact O-N 3.38Å; Q34-R37 VanDerWaalsContact O-N 3.15Å; Q34-S38 PolarHBondContact O-N 2.79Å; Q34-S38 PolarHBondContact O-OG 3.3Å
35K96.9Very high95.6Very high192 Ų19274.4 Ų74.484%0.83539%0.393SS*.Hα-helixtrans-60.5-42.4178.1-67.2-178.5179.9178.90112.2C33 S38 S39C33-K35 VanDerWaalsContact C-N 3.33Å; C33-K35 PolarHBondContact O-N 3.42Å; K35-S38 PolarHBondContact O-N 3.44Å; K35-S39 PolarHBondContact O-N 2.9Å; K35-S39 VanDerWaalsContact O-N 3.13Å
36L97.2Very high95.4Very high52 Ų5274.1 Ų74.127%0.27239%0.394SS..Hα-helixtrans-72.4-33.3177.5-65.5172.6000111.1E18 F19 C22 C33 Q34 S39 F40E18-L36 HydrophobicContact CB-CD2 4.27Å; F19-L36 HydrophobicContact CB-CB 4.1Å; F19-L36 HydrophobicContact CD2-CB 4.12Å; C22-L36 HydrophobicContact CB-CD1 3.47Å; C22-L36 VanDerWaalsContact CB-CD1 3.47Å; C33-L36 PolarHBondContact O-N 3.15Å; Q34-L36 VanDerWaalsContact C-N 3.32Å; Q34-L36 PolarHBondContact O-N 2.91Å; L36-S39 PolarHBondContact O-N 2.88Å; L36-F40 WeakPolarHBondContact O-CB 3.45Å; L36-F40 PolarHBondContact O-N 2.89Å
37R97.4Very high95.4Very high38 Ų3878 Ų7814%0.14341%0.41CS..Hα-helixtrans-59.6-48.9172.2-18057.7-175.6-172.12.6111.5F19 C33 Q34 S39 F40 E41 V49 D53F19-R37 HydrophobicContact CD2-CB 4.06Å; F19-R37 HydrophobicContact CE2-CB 3.7Å; F19-R37 HydrophobicContact CE2-CG 4.39Å; F19-R37 HydrophobicContact CZ-CB 4.15Å; F19-R37 HydrophobicContact CZ-CG 4.35Å; C33-R37 PolarHBondContact O-N 3.32Å; Q34-R37 WeakPolarHBondContact O-CB 3.49Å; Q34-R37 PolarHBondContact O-N 3.38Å; Q34-R37 VanDerWaalsContact O-N 3.15Å; R37-S39 VanDerWaalsContact C-N 3.32Å; R37-S39 PolarHBondContact O-N 2.9Å; R37-F40 WeakPolarHBondContact O-CB 3.37Å; R37-F40 PolarHBondContact O-N 3.15Å; R37-E41 IonicContact CZ-OE1 2.86Å; R37-E41 VanDerWaalsContact NE-CD 3.31Å; R37-E41 IonicContact NE-OE1 3.86Å; R37-E41 PolarHBondContact NE-OE1 3.08Å; R37-E41 IonicContact NH2-OE1 3.02Å; R37-E41 PolarHBondContact NH2-OE1 3.24Å; R37-E41 WeakPolarHBondContact O-CG 3.35Å; R37-E41 PolarHBondContact O-N 2.94Å; R37-V49 VanDerWaalsContact NH2-CG1 3.27Å; R37-D53 IonicContact CZ-OD1 3.66Å; R37-D53 IonicContact CZ-OD2 2.8Å; R37-D53 VanDerWaalsContact NH1-CG 3.31Å; R37-D53 IonicContact NH1-OD1 3.56Å; R37-D53 PolarHBondContact NH1-OD1 3.19Å; R37-D53 IonicContact NH1-OD2 2.68Å; R37-D53 PolarHBondContact NH1-OD2 2.84Å; R37-D53 IonicContact NH2-OD2 3.55Å; R37-D53 PolarHBondContact NH2-OD2 2.81Å
38S97.4Very high95.5Very high67 Ų6776.2 Ų76.247%0.46939%0.386SS..Hα-helixtrans-63.1-37.7177.5-52.90000112.3Q34 K35 S42Q34-S38 PolarHBondContact O-N 2.79Å; Q34-S38 PolarHBondContact O-OG 3.3Å; K35-S38 PolarHBondContact O-N 3.44Å; S38-S42 WeakPolarHBondContact O-CB 3.28Å; S38-S42 PolarHBondContact O-N 3.26Å; S38-S42 PolarHBondContact O-OG 3.42Å
39S96.8Very high95.7Very high29 Ų2973.5 Ų73.520%0.20337%0.374CS..Hα-helixtrans-62.3-43.9173.4-1730000111.8K35 L36 R37 S42 R43K35-S39 PolarHBondContact O-N 2.9Å; K35-S39 VanDerWaalsContact O-N 3.13Å; L36-S39 PolarHBondContact O-N 2.88Å; R37-S39 VanDerWaalsContact C-N 3.32Å; R37-S39 PolarHBondContact O-N 2.9Å; S39-S42 WeakPolarHBondContact CA-OG 3.4Å; S39-S42 PolarHBondContact O-OG 3.03Å; S39-R43 WeakPolarHBondContact O-CB 3.4Å; S39-R43 WeakPolarHBondContact O-CD 3.25Å; S39-R43 VanDerWaalsContact O-CG 3.27Å; S39-R43 WeakPolarHBondContact O-CG 3.4Å; S39-R43 PolarHBondContact O-N 2.99Å; S39-R43 VanDerWaalsContact O-N 3.1Å; S39-R43 PolarHBondContact OG-NE 3.44Å
40F97.6Very high95.9Very high0 Ų076.4 Ų76.40%038%0.384CS..Hα-helixtrans-63-46.9176.7172.5-133.3000112.2A15 R16 F19 L36 R37 S42 R43 C44 V49 F52A15-F40 HydrophobicContact CB-CB 4.41Å; R16-F40 HydrophobicContact CB-CD2 3.8Å; R16-F40 HydrophobicContact CB-CE2 3.53Å; R16-F40 HydrophobicContact CB-CZ 4.23Å; R16-F40 HydrophobicContact CG-CE2 3.92Å; R16-F40 HydrophobicContact CG-CZ 4.1Å; F19-F40 HydrophobicContact CB-CB 4.34Å; F19-F40 AromaticContact CD1-CD1 3.83Å; F19-F40 HydrophobicContact CD1-CD1 3.83Å; F19-F40 HydrophobicContact CD1-CE1 4.36Å; F19-F40 HydrophobicContact CE1-CD1 4.36Å; L36-F40 WeakPolarHBondContact O-CB 3.45Å; L36-F40 PolarHBondContact O-N 2.89Å; R37-F40 WeakPolarHBondContact O-CB 3.37Å; R37-F40 PolarHBondContact O-N 3.15Å; F40-S42 VanDerWaalsContact C-N 3.35Å; F40-S42 PolarHBondContact O-N 2.68Å; F40-R43 PolarHBondContact O-N 3.48Å; F40-C44 HydrophobicContact CD2-CB 4.23Å; F40-C44 WeakPolarHBondContact CD2-SG 3.31Å; F40-C44 HydrophobicContact CE2-CB 4.06Å; F40-C44 WeakPolarHBondContact CE2-SG 3.49Å; F40-C44 VanDerWaalsContact O-CB 3.25Å; F40-C44 WeakPolarHBondContact O-CB 3.48Å; F40-C44 PolarHBondContact O-N 3.25Å; F40-C44 VanDerWaalsContact O-N 3.1Å; F40-C44 PolarHBondContact O-SG 3.06Å; F40-V49 HydrophobicContact CD1-CG1 4.45Å; F40-V49 HydrophobicContact CE1-CB 4.37Å; F40-V49 HydrophobicContact CE1-CG1 3.86Å; F40-V49 HydrophobicContact CE1-CG2 4.32Å; F40-V49 HydrophobicContact CE2-CG2 4.35Å; F40-V49 HydrophobicContact CZ-CB 4.3Å; F40-V49 HydrophobicContact CZ-CG1 4.27Å; F40-V49 HydrophobicContact CZ-CG2 4.11Å; F40-F52 AromaticContact CE2-CD2 3.99Å; F40-F52 HydrophobicContact CE2-CD2 3.99Å; F40-F52 HydrophobicContact CZ-CB 3.95Å; F40-F52 AromaticContact CZ-CD2 3.89Å; F40-F52 HydrophobicContact CZ-CD2 3.89Å; F40-F52 HydrophobicContact CZ-CG 4.39Å
41E96.8Very high96.2Very high94 Ų9480.4 Ų80.444%0.43939%0.391SS..Hα-helixtrans-66.8-32.9179.7-72.7-178.6165.700113.6R37 V49R37-E41 IonicContact CZ-OE1 2.86Å; R37-E41 VanDerWaalsContact NE-CD 3.31Å; R37-E41 IonicContact NE-OE1 3.86Å; R37-E41 PolarHBondContact NE-OE1 3.08Å; R37-E41 IonicContact NH2-OE1 3.02Å; R37-E41 PolarHBondContact NH2-OE1 3.24Å; R37-E41 WeakPolarHBondContact O-CG 3.35Å; R37-E41 PolarHBondContact O-N 2.94Å; E41-V49 HydrophobicContact CG-CG1 4.19Å
42S96.3Very high96.4Very high93 Ų9377.1 Ų77.165%0.6537%0.366SS*.Hα-helixtrans-77.5-30.7178.355.90000113.4S38 S39 F40S38-S42 WeakPolarHBondContact O-CB 3.28Å; S38-S42 PolarHBondContact O-N 3.26Å; S38-S42 PolarHBondContact O-OG 3.42Å; S39-S42 WeakPolarHBondContact CA-OG 3.4Å; S39-S42 PolarHBondContact O-OG 3.03Å; F40-S42 VanDerWaalsContact C-N 3.35Å; F40-S42 PolarHBondContact O-N 2.68Å
43R95.7Very high96.4Very high142 Ų14272.9 Ų72.954%0.53635%0.35SS..Hα-helixtrans-90.2-17.2-178.1-68.6170.2-176.7-98.70.9113.6A15 S39 F40A15-R43 HydrophobicContact CB-CB 4.4Å; S39-R43 WeakPolarHBondContact O-CB 3.4Å; S39-R43 WeakPolarHBondContact O-CD 3.25Å; S39-R43 VanDerWaalsContact O-CG 3.27Å; S39-R43 WeakPolarHBondContact O-CG 3.4Å; S39-R43 PolarHBondContact O-N 2.99Å; S39-R43 VanDerWaalsContact O-N 3.1Å; S39-R43 PolarHBondContact OG-NE 3.44Å; F40-R43 PolarHBondContact O-N 3.48Å
44C95.9Very high96.4Very high9 Ų980.4 Ų80.46%0.06138%0.382CS..SBendtrans-111.4143.1-176.1-68.30000112.4C12 F40 Q46 V49C12-C44 VanDerWaalsContact C-SG 3.57Å; C12-C44 WeakPolarHBondContact CA-SG 3.39Å; C12-C44 HydrophobicContact CB-CB 4.06Å; C12-C44 WeakPolarHBondContact CB-SG 3.4Å; C12-C44 PolarHBondContact O-SG 3.28Å; C12-C44 VanDerWaalsContact O-SG 3.36Å; C12-C44 VanDerWaalsContact SG-CA 3.57Å; C12-C44 WeakPolarHBondContact SG-CB 3.37Å; C12-C44 CovalentContact SG-SG 2.02Å; C12-C44 PolarHBondContact SG-SG 2.93Å; F40-C44 HydrophobicContact CD2-CB 4.23Å; F40-C44 WeakPolarHBondContact CD2-SG 3.31Å; F40-C44 HydrophobicContact CE2-CB 4.06Å; F40-C44 WeakPolarHBondContact CE2-SG 3.49Å; F40-C44 VanDerWaalsContact O-CB 3.25Å; F40-C44 WeakPolarHBondContact O-CB 3.48Å; F40-C44 PolarHBondContact O-N 3.25Å; F40-C44 VanDerWaalsContact O-N 3.1Å; F40-C44 PolarHBondContact O-SG 3.06Å; C44-Q46 PolarHBondContact O-N 3.07Å; C44-V49 HydrophobicContact CB-CG2 3.59Å
45P95.3Very high96.4Very high50 Ų5081 Ų8133%0.32538%0.38SS..  trans-55.2137.4165.9-23.733.6000111P4 Q47 W48 V49P4-P45 HydrophobicContact CG-CG 4.32Å; P45-Q47 PolarHBondContact O-N 3.42Å; P45-Q47 VanDerWaalsContact O-N 3.08Å; P45-W48 HydrophobicContact CB-CB 4.42Å; P45-W48 HydrophobicContact CB-CG 4.23Å; P45-W48 HydrophobicContact CG-CD2 4.22Å; P45-W48 HydrophobicContact CG-CG 4.29Å; P45-W48 WeakPolarHBondContact O-CA 3.43Å; P45-W48 WeakPolarHBondContact O-CB 3.34Å; P45-W48 PolarHBondContact O-N 3.06Å; P45-V49 PolarHBondContact O-N 3.02Å
46Q93.5Very high96.4Very high141 Ų14172.6 Ų72.666%0.65934%0.343SS*.Hα-helixtrans-56-33.8-176.5-66.9-177.932.300113.5C44 W48 V49 K50C44-Q46 PolarHBondContact O-N 3.07Å; Q46-W48 VanDerWaalsContact C-N 3.3Å; Q46-W48 PolarHBondContact O-N 3.47Å; Q46-V49 PolarHBondContact O-N 3.48Å; Q46-K50 WeakPolarHBondContact O-CG 3.36Å; Q46-K50 PolarHBondContact O-N 2.86Å
47Q94.5Very high96.3Very high132 Ų13274.7 Ų74.762%0.61736%0.355SS*.Hα-helixtrans-65.5-36.1176.4-61.8-57.4-36.200112P45 Y51P45-Q47 PolarHBondContact O-N 3.42Å; P45-Q47 VanDerWaalsContact O-N 3.08Å; Q47-Y51 WeakPolarHBondContact O-CB 3.25Å; Q47-Y51 PolarHBondContact O-N 3.06Å
48W96Very high96.2Very high76 Ų7679.5 Ų79.529%0.28837%0.374SS..Hα-helixtrans-71.8-40.7176.7-72.417.1000111.3P4 R9 W13 P45 Q46 K50 Y51 F52P4-W48 HydrophobicContact CG-CH2 4.21Å; P4-W48 HydrophobicContact CG-CZ2 4.26Å; R9-W48 HydrophobicContact CB-CH2 4.39Å; R9-W48 HydrophobicContact CB-CZ3 4.3Å; R9-W48 HydrophobicContact CG-CH2 3.52Å; R9-W48 HydrophobicContact CG-CZ3 3.81Å; W13-W48 AromaticContact NE1-CZ3 3.55Å; P45-W48 HydrophobicContact CB-CB 4.42Å; P45-W48 HydrophobicContact CB-CG 4.23Å; P45-W48 HydrophobicContact CG-CD2 4.22Å; P45-W48 HydrophobicContact CG-CG 4.29Å; P45-W48 WeakPolarHBondContact O-CA 3.43Å; P45-W48 WeakPolarHBondContact O-CB 3.34Å; P45-W48 PolarHBondContact O-N 3.06Å; Q46-W48 VanDerWaalsContact C-N 3.3Å; Q46-W48 PolarHBondContact O-N 3.47Å; W48-K50 PolarHBondContact O-N 3.08Å; W48-Y51 PolarHBondContact O-N 3.03Å; W48-F52 HydrophobicContact CB-CD2 4.2Å; W48-F52 HydrophobicContact CB-CE2 3.88Å; W48-F52 HydrophobicContact CE3-CE2 4.19Å; W48-F52 HydrophobicContact CE3-CZ 4.45Å; W48-F52 WeakPolarHBondContact O-CB 3.28Å; W48-F52 WeakPolarHBondContact O-CD2 3.38Å; W48-F52 VanDerWaalsContact O-CG 3.28Å; W48-F52 WeakPolarHBondContact O-CG 3.4Å; W48-F52 PolarHBondContact O-N 3.33Å
49V96.7Very high96Very high9 Ų979.7 Ų79.76%0.05537%0.369CS..Hα-helixtrans-54.4-53.1172.9175.90000110.2R37 F40 E41 C44 P45 Q46 Y51 F52 D53R37-V49 VanDerWaalsContact NH2-CG1 3.27Å; F40-V49 HydrophobicContact CD1-CG1 4.45Å; F40-V49 HydrophobicContact CE1-CB 4.37Å; F40-V49 HydrophobicContact CE1-CG1 3.86Å; F40-V49 HydrophobicContact CE1-CG2 4.32Å; F40-V49 HydrophobicContact CE2-CG2 4.35Å; F40-V49 HydrophobicContact CZ-CB 4.3Å; F40-V49 HydrophobicContact CZ-CG1 4.27Å; F40-V49 HydrophobicContact CZ-CG2 4.11Å; E41-V49 HydrophobicContact CG-CG1 4.19Å; C44-V49 HydrophobicContact CB-CG2 3.59Å; P45-V49 PolarHBondContact O-N 3.02Å; Q46-V49 PolarHBondContact O-N 3.48Å; V49-Y51 VanDerWaalsContact C-N 3.32Å; V49-Y51 PolarHBondContact O-N 3.21Å; V49-F52 PolarHBondContact O-N 3.48Å; V49-D53 VanDerWaalsContact O-CG 3.29Å; V49-D53 PolarHBondContact O-N 3.45Å
50K96.7Very high95.9Very high117 Ų11781.7 Ų81.751%0.50937%0.374SS..Hα-helixtrans-57.1-43177.3-71.1177.6-177-178.70112.7Q46 W48 K54Q46-K50 WeakPolarHBondContact O-CG 3.36Å; Q46-K50 PolarHBondContact O-N 2.86Å; W48-K50 PolarHBondContact O-N 3.08Å; K50-K54 WeakPolarHBondContact O-CG 3.45Å; K50-K54 PolarHBondContact O-N 3.4Å
51Y96.8Very high95.6Very high126 Ų12688.1 Ų88.149%0.49440%0.399SS..Hα-helixtrans-64.6-45.7177.7170.1-104000111.9Q47 W48 V49 K54 R55Q47-Y51 WeakPolarHBondContact O-CB 3.25Å; Q47-Y51 PolarHBondContact O-N 3.06Å; W48-Y51 PolarHBondContact O-N 3.03Å; V49-Y51 VanDerWaalsContact C-N 3.32Å; V49-Y51 PolarHBondContact O-N 3.21Å; Y51-K54 PolarHBondContact O-N 2.83Å; Y51-R55 WeakPolarHBondContact O-CB 3.05Å; Y51-R55 PolarHBondContact O-N 2.95Å; Y51-R55 PolarHBondContact OH-NH1 3.34Å
52F97.7Very high95.4Very high14 Ų1487.6 Ų87.66%0.06140%0.396CS..Hα-helixtrans-66.4-42.6-179.6-69.3-43.8000111.7W13 R16 W20 F40 W48 V49 K54 R55 R56W13-F52 AromaticContact CD1-CZ 3.79Å; W13-F52 AromaticContact NE1-CZ 3.66Å; R16-F52 HydrophobicContact CG-CB 4.5Å; R16-F52 HydrophobicContact CG-CD2 4.45Å; R16-F52 HydrophobicContact CG-CG 4.41Å; W20-F52 HydrophobicContact CZ2-CB 4.08Å; W20-F52 VanDerWaalsContact CZ2-O 3.25Å; W20-F52 WeakPolarHBondContact CZ2-O 3.25Å; F40-F52 AromaticContact CE2-CD2 3.99Å; F40-F52 HydrophobicContact CE2-CD2 3.99Å; F40-F52 HydrophobicContact CZ-CB 3.95Å; F40-F52 AromaticContact CZ-CD2 3.89Å; F40-F52 HydrophobicContact CZ-CD2 3.89Å; F40-F52 HydrophobicContact CZ-CG 4.39Å; W48-F52 HydrophobicContact CB-CD2 4.2Å; W48-F52 HydrophobicContact CB-CE2 3.88Å; W48-F52 HydrophobicContact CE3-CE2 4.19Å; W48-F52 HydrophobicContact CE3-CZ 4.45Å; W48-F52 WeakPolarHBondContact O-CB 3.28Å; W48-F52 WeakPolarHBondContact O-CD2 3.38Å; W48-F52 VanDerWaalsContact O-CG 3.28Å; W48-F52 WeakPolarHBondContact O-CG 3.4Å; W48-F52 PolarHBondContact O-N 3.33Å; V49-F52 PolarHBondContact O-N 3.48Å; F52-K54 VanDerWaalsContact C-N 3.35Å; F52-K54 PolarHBondContact O-N 3Å; F52-R55 CarbonylContact O-C 3.32Å; F52-R55 WeakPolarHBondContact O-CA 3.43Å; F52-R55 WeakPolarHBondContact O-CB 3.49Å; F52-R55 PolarHBondContact O-N 3.38Å; F52-R56 PolarHBondContact O-N 3.01Å
53D96.1Very high95.1Very high43 Ų4389.9 Ų89.923%0.2339%0.394CS..Hα-helixtrans-56.3-49.8176.2-68.8-18.4000110.7R37 V49 R55 R56 D57R37-D53 IonicContact CZ-OD1 3.66Å; R37-D53 IonicContact CZ-OD2 2.8Å; R37-D53 VanDerWaalsContact NH1-CG 3.31Å; R37-D53 IonicContact NH1-OD1 3.56Å; R37-D53 PolarHBondContact NH1-OD1 3.19Å; R37-D53 IonicContact NH1-OD2 2.68Å; R37-D53 PolarHBondContact NH1-OD2 2.84Å; R37-D53 IonicContact NH2-OD2 3.55Å; R37-D53 PolarHBondContact NH2-OD2 2.81Å; V49-D53 VanDerWaalsContact O-CG 3.29Å; V49-D53 PolarHBondContact O-N 3.45Å; D53-R55 VanDerWaalsContact C-N 3.32Å; D53-R55 PolarHBondContact O-N 3.1Å; D53-R56 WeakPolarHBondContact O-CB 3.49Å; D53-R56 PolarHBondContact O-N 3.43Å; D53-D57 PolarHBondContact O-N 3.46Å
54K96.9Very high94.8Very high160 Ų16088.9 Ų88.970%0.69639%0.394SS*.Hα-helixtrans-59.2-40.6174-70.5-179.7179.6-172.80112.9K50 Y51 F52 R56 D57 Y58K50-K54 WeakPolarHBondContact O-CG 3.45Å; K50-K54 PolarHBondContact O-N 3.4Å; Y51-K54 PolarHBondContact O-N 2.83Å; F52-K54 VanDerWaalsContact C-N 3.35Å; F52-K54 PolarHBondContact O-N 3Å; K54-R56 VanDerWaalsContact C-N 3.34Å; K54-D57 PolarHBondContact O-N 3.13Å; K54-Y58 PolarHBondContact O-N 2.85Å
55R96.9Very high94.5Very high117 Ų11791.2 Ų91.244%0.44241%0.405SS..Hα-helixtrans-64.6-39.1178.6-175.8176.1178.8931.9111.3Y51 F52 D53 Y58 L59Y51-R55 WeakPolarHBondContact O-CB 3.05Å; Y51-R55 PolarHBondContact O-N 2.95Å; Y51-R55 PolarHBondContact OH-NH1 3.34Å; F52-R55 CarbonylContact O-C 3.32Å; F52-R55 WeakPolarHBondContact O-CA 3.43Å; F52-R55 WeakPolarHBondContact O-CB 3.49Å; F52-R55 PolarHBondContact O-N 3.38Å; D53-R55 VanDerWaalsContact C-N 3.32Å; D53-R55 PolarHBondContact O-N 3.1Å; R55-Y58 PolarHBondContact O-N 3.14Å; R55-L59 HydrophobicContact CG-CD1 4.12Å; R55-L59 HydrophobicContact CG-CG 4.43Å; R55-L59 WeakPolarHBondContact O-CB 3.45Å; R55-L59 VanDerWaalsContact O-CG 3.25Å; R55-L59 WeakPolarHBondContact O-CG 3.36Å; R55-L59 PolarHBondContact O-N 3.37Å
56R96Very high94.2Very high15 Ų1595.1 Ų95.16%0.05742%0.419CS..Hα-helixtrans-61.5-48.4176.4-168.4-174.9168.886.67.4110.7W20 D24 E28 F52 D53 K54 Y58 L59 K60W20-R56 HydrophobicContact CD2-CB 4.44Å; W20-R56 HydrophobicContact CD2-CG 4.16Å; W20-R56 HydrophobicContact CE3-CG 4.39Å; W20-R56 HydrophobicContact CH2-CB 3.85Å; W20-R56 HydrophobicContact CH2-CG 4.39Å; W20-R56 HydrophobicContact CZ2-CB 3.54Å; W20-R56 HydrophobicContact CZ2-CG 4.17Å; W20-R56 HydrophobicContact CZ3-CB 4.41Å; W20-R56 HydrophobicContact CZ3-CG 4.49Å; W20-R56 PolarHBondContact O-NH1 3.31Å; W20-R56 PolarHBondContact O-NH2 3.05Å; D24-R56 IonicContact OD1-CZ 3.69Å; D24-R56 IonicContact OD1-NH1 3.25Å; D24-R56 IonicContact OD1-NH2 3.27Å; D24-R56 PolarHBondContact OD1-NH2 2.99Å; E28-R56 IonicContact OE1-CZ 2.7Å; E28-R56 IonicContact OE1-NH2 3.37Å; E28-R56 PolarHBondContact OE1-NH2 2.8Å; E28-R56 IonicContact OE2-CZ 2.71Å; E28-R56 IonicContact OE2-NE 2.81Å; E28-R56 PolarHBondContact OE2-NE 3.41Å; E28-R56 IonicContact OE2-NH2 3.11Å; E28-R56 PolarHBondContact OE2-NH2 3.46Å; F52-R56 PolarHBondContact O-N 3.01Å; D53-R56 WeakPolarHBondContact O-CB 3.49Å; D53-R56 PolarHBondContact O-N 3.43Å; K54-R56 VanDerWaalsContact C-N 3.34Å; R56-Y58 VanDerWaalsContact C-N 3.32Å; R56-Y58 PolarHBondContact O-N 2.98Å; R56-L59 PolarHBondContact O-N 2.84Å; R56-L59 VanDerWaalsContact O-N 3.15Å; R56-K60 HydrophobicContact CG-CD 4.2Å; R56-K60 WeakPolarHBondContact O-CG 3.27Å; R56-K60 PolarHBondContact O-N 3.44Å
57D94.8Very high94Very high96 Ų9693.2 Ų93.251%0.51342%0.417SS..Hα-helixtrans-59.7-44.6179-70.1-24.9000111.7D53 K54 L59 K60 Y61D53-D57 PolarHBondContact O-N 3.46Å; K54-D57 PolarHBondContact O-N 3.13Å; D57-L59 PolarHBondContact O-N 3.42Å; D57-K60 PolarHBondContact O-N 2.02Å; D57-Y61 WeakPolarHBondContact O-CB 3.04Å; D57-Y61 PolarHBondContact O-N 3.37Å
58Y95.5Very high93.5Very high139 Ų13993 Ų9355%0.54542%0.416SS..Hα-helixtrans-59.8-45.4174171.8-104.6000112.3K54 R55 R56 K60 Y61 K62K54-Y58 PolarHBondContact O-N 2.85Å; R55-Y58 PolarHBondContact O-N 3.14Å; R56-Y58 VanDerWaalsContact C-N 3.32Å; R56-Y58 PolarHBondContact O-N 2.98Å; Y58-K60 VanDerWaalsContact C-N 3.32Å; Y58-K60 PolarHBondContact O-N 3.36Å; Y58-Y61 PolarHBondContact O-N 3.05Å; Y58-K62 HydrophobicContact CE1-CD 4.32Å; Y58-K62 VanDerWaalsContact O-CB 3.28Å; Y58-K62 WeakPolarHBondContact O-CB 3.39Å; Y58-K62 PolarHBondContact O-N 3.33Å
59L94.8Very high92.5Very high71 Ų7191 Ų9137%0.37242%0.419SS..Hα-helixtrans-64-37.8178.7-72.1171.5000112W20 R55 R56 D57 K63W20-L59 HydrophobicContact CH2-CD1 4.39Å; W20-L59 HydrophobicContact CZ3-CD1 4.09Å; R55-L59 HydrophobicContact CG-CD1 4.12Å; R55-L59 HydrophobicContact CG-CG 4.43Å; R55-L59 WeakPolarHBondContact O-CB 3.45Å; R55-L59 VanDerWaalsContact O-CG 3.25Å; R55-L59 WeakPolarHBondContact O-CG 3.36Å; R55-L59 PolarHBondContact O-N 3.37Å; R56-L59 PolarHBondContact O-N 2.84Å; R56-L59 VanDerWaalsContact O-N 3.15Å; D57-L59 PolarHBondContact O-N 3.42Å; L59-K63 WeakPolarHBondContact O-CB 2.78Å; L59-K63 PolarHBondContact O-N 3.1Å
60K92.7Very high91.3Very high72 Ų7298.4 Ų98.431%0.31345%0.447SS..Hα-helixtrans-63.7-47.1173.6-73.1168.160.5-176.70111.4E28 R56 D57 Y58 K63 K64E28-K60 VanDerWaalsContact CD-NZ 3.31Å; E28-K60 WeakPolarHBondContact OE2-CD 3.31Å; E28-K60 VanDerWaalsContact OE2-CE 3.25Å; E28-K60 WeakPolarHBondContact OE2-CE 3.32Å; E28-K60 IonicContact OE2-NZ 2.71Å; E28-K60 PolarHBondContact OE2-NZ 2.89Å; R56-K60 HydrophobicContact CG-CD 4.2Å; R56-K60 WeakPolarHBondContact O-CG 3.27Å; R56-K60 PolarHBondContact O-N 3.44Å; D57-K60 PolarHBondContact O-N 2.02Å; Y58-K60 VanDerWaalsContact C-N 3.32Å; Y58-K60 PolarHBondContact O-N 3.36Å; K60-K63 PolarHBondContact O-N 3.25Å; K60-K64 WeakPolarHBondContact O-CG 3.31Å; K60-K64 PolarHBondContact O-N 3.19Å
61Y91.4Very high89.8Confident134 Ų13498.8 Ų98.853%0.52545%0.454SS..Hα-helixtrans-61.2-47.8176.7174.8-108000111.7D57 Y58 K63 K64 L65D57-Y61 WeakPolarHBondContact O-CB 3.04Å; D57-Y61 PolarHBondContact O-N 3.37Å; Y58-Y61 PolarHBondContact O-N 3.05Å; Y61-K63 VanDerWaalsContact C-N 3.32Å; Y61-K63 PolarHBondContact O-N 3.5Å; Y61-K64 WeakPolarHBondContact O-CB 3.01Å; Y61-K64 PolarHBondContact O-N 3.43Å; Y61-K64 VanDerWaalsContact O-N 3.14Å; Y61-L65 HydrophobicContact CD1-CD1 3.96Å; Y61-L65 HydrophobicContact CD1-CG 4.41Å; Y61-L65 HydrophobicContact CE1-CD1 3.3Å; Y61-L65 HydrophobicContact CE1-CG 3.94Å; Y61-L65 HydrophobicContact CE2-CD1 4.35Å; Y61-L65 HydrophobicContact CE2-CD2 4.24Å; Y61-L65 HydrophobicContact CE2-CG 4.12Å; Y61-L65 PolarHBondContact O-N 2.96Å
62K92.6Very high88.3Confident84 Ų8496.6 Ų96.637%0.36546%0.456SS..Hα-helixtrans-56.2-45.9175.2178.1178.1168.8177.70111.4Y58 K64 L65 E66Y58-K62 HydrophobicContact CE1-CD 4.32Å; Y58-K62 VanDerWaalsContact O-CB 3.28Å; Y58-K62 WeakPolarHBondContact O-CB 3.39Å; Y58-K62 PolarHBondContact O-N 3.33Å; K62-K64 VanDerWaalsContact C-N 3.33Å; K62-K64 PolarHBondContact O-N 3.45Å; K62-L65 WeakPolarHBondContact O-CB 3.31Å; K62-L65 PolarHBondContact O-N 3.42Å; K62-E66 WeakPolarHBondContact CE-OE1 3.28Å; K62-E66 HydrophobicContact CG-CG 4.49Å; K62-E66 IonicContact NZ-OE1 3.77Å; K62-E66 WeakPolarHBondContact O-CG 3.48Å; K62-E66 PolarHBondContact O-N 3.48Å
63K91Very high86.8Confident141 Ų141100.8 Ų100.861%0.61348%0.484SS*.Hα-helixtrans-60-43.4177.1-174.5177.4-179.4-179.60111.5L59 K60 Y61 E66 T67L59-K63 WeakPolarHBondContact O-CB 2.78Å; L59-K63 PolarHBondContact O-N 3.1Å; K60-K63 PolarHBondContact O-N 3.25Å; Y61-K63 VanDerWaalsContact C-N 3.32Å; Y61-K63 PolarHBondContact O-N 3.5Å; K63-E66 PolarHBondContact O-N 2.75Å; K63-T67 HydrophobicContact CG-CG2 4.49Å; K63-T67 WeakPolarHBondContact O-CG2 3.36Å; K63-T67 PolarHBondContact O-N 3.39Å; K63-T67 PolarHBondContact O-OG1 3.49Å
64K89.2Confident85.2Confident121 Ų121107.1 Ų107.153%0.52651%0.512SS..Hα-helixtrans-60.3-46.2175-72.4-175.3176.6-167.80112.1K60 Y61 K62 E66 T67 E68K60-K64 WeakPolarHBondContact O-CG 3.31Å; K60-K64 PolarHBondContact O-N 3.19Å; Y61-K64 WeakPolarHBondContact O-CB 3.01Å; Y61-K64 PolarHBondContact O-N 3.43Å; Y61-K64 VanDerWaalsContact O-N 3.14Å; K62-K64 VanDerWaalsContact C-N 3.33Å; K62-K64 PolarHBondContact O-N 3.45Å; K64-E66 VanDerWaalsContact C-N 3.3Å; K64-E66 PolarHBondContact O-N 3.01Å; K64-T67 WeakPolarHBondContact CA-OG1 3.16Å; K64-T67 PolarHBondContact O-N 2.88Å; K64-T67 PolarHBondContact O-OG1 3.19Å; K64-T67 VanDerWaalsContact O-OG1 3.11Å; K64-E68 VanDerWaalsContact O-CB 3.32Å; K64-E68 WeakPolarHBondContact O-CB 3.37Å; K64-E68 PolarHBondContact O-N 3.43Å
65L89.6Confident83.2Confident57 Ų57105.9 Ų105.930%0.29852%0.518SS..Hα-helixtrans-59.7-40175.8-73.2-178.4000112.5Y61 K62 G69 Y70Y61-L65 HydrophobicContact CD1-CD1 3.96Å; Y61-L65 HydrophobicContact CD1-CG 4.41Å; Y61-L65 HydrophobicContact CE1-CD1 3.3Å; Y61-L65 HydrophobicContact CE1-CG 3.94Å; Y61-L65 HydrophobicContact CE2-CD1 4.35Å; Y61-L65 HydrophobicContact CE2-CD2 4.24Å; Y61-L65 HydrophobicContact CE2-CG 4.12Å; Y61-L65 PolarHBondContact O-N 2.96Å; K62-L65 WeakPolarHBondContact O-CB 3.31Å; K62-L65 PolarHBondContact O-N 3.42Å; L65-G69 CarbonylContact O-C 3.48Å; L65-G69 WeakPolarHBondContact O-CA 3.27Å; L65-G69 PolarHBondContact O-N 2.94Å; L65-Y70 HydrophobicContact CD2-CD2 4.5Å
66E89.6Confident81.3Confident133 Ų133106.5 Ų106.562%0.62154%0.535SS*.Hα-helixtrans-69.6-34.1178-72.3173164.300112.2K62 K63 K64K62-E66 WeakPolarHBondContact CE-OE1 3.28Å; K62-E66 HydrophobicContact CG-CG 4.49Å; K62-E66 IonicContact NZ-OE1 3.77Å; K62-E66 WeakPolarHBondContact O-CG 3.48Å; K62-E66 PolarHBondContact O-N 3.48Å; K63-E66 PolarHBondContact O-N 2.75Å; K64-E66 VanDerWaalsContact C-N 3.3Å; K64-E66 PolarHBondContact O-N 3.01Å
67T87.8Confident79.5Confident100 Ų100109.3 Ų109.361%0.61357%0.569SS**Hα-helixtrans-86.3-37.8-178.753.20000114.1K63 K64K63-T67 HydrophobicContact CG-CG2 4.49Å; K63-T67 WeakPolarHBondContact O-CG2 3.36Å; K63-T67 PolarHBondContact O-N 3.39Å; K63-T67 PolarHBondContact O-OG1 3.49Å; K64-T67 WeakPolarHBondContact CA-OG1 3.16Å; K64-T67 PolarHBondContact O-N 2.88Å; K64-T67 PolarHBondContact O-OG1 3.19Å; K64-T67 VanDerWaalsContact O-OG1 3.11Å
68E85.2Confident77.4Confident128 Ų128114.2 Ų114.260%0.59859%0.586SS**Hα-helixtrans-101.2-8.9-173.8-61.7171.3-152.800112K64K64-E68 VanDerWaalsContact O-CB 3.32Å; K64-E68 WeakPolarHBondContact O-CB 3.37Å; K64-E68 PolarHBondContact O-N 3.43Å
69G74.3Confident75Confident35 Ų35116.6 Ų116.636%0.36162%0.623SS.*  trans79177.1-170.900000112.5L65 L71L65-G69 CarbonylContact O-C 3.48Å; L65-G69 WeakPolarHBondContact O-CA 3.27Å; L65-G69 PolarHBondContact O-N 2.94Å; G69-L71 PolarHBondContact O-N 3.01Å
70Y71.6Confident74Confident163 Ų163118.9 Ų118.964%0.63964%0.635SS**  trans-77.7112.8173.5178.2-98.8000109.6L65 P72L65-Y70 HydrophobicContact CD2-CD2 4.5Å; Y70-P72 HydrophobicContact CD1-CG 4.17Å; Y70-P72 HydrophobicContact CE1-CB 4.01Å; Y70-P72 HydrophobicContact CE1-CG 3.89Å; Y70-P72 WeakPolarHBondContact O-CD 3.47Å
71L64.9Low73Confident126 Ų126121.3 Ų121.366%0.6665%0.652SS**  trans-91.5113.1165.4-67.3171.6000107.9G69G69-L71 PolarHBondContact O-N 3.01Å
72P67Low72Confident80 Ų80120.6 Ų120.652%0.51966%0.659SS.*  trans-56.2140.7169.7-14.726.5000108.7Y70 E74Y70-P72 HydrophobicContact CD1-CG 4.17Å; Y70-P72 HydrophobicContact CE1-CB 4.01Å; Y70-P72 HydrophobicContact CE1-CG 3.89Å; Y70-P72 WeakPolarHBondContact O-CD 3.47Å; P72-E74 PolarHBondContact O-N 2.72Å
73P65.1Low70.8Confident102 Ų102122.8 Ų122.866%0.66268%0.677SS**  trans-57.2120.8166.723.5-29.5000107.2T75P73-T75 PolarHBondContact O-N 3.48Å
74E62.7Low69.5Low176 Ų176121.6 Ų121.682%0.82268%0.681SS**  trans-44.5110.7173.1-68.2-76.8128.900107.5P72 T76P72-E74 PolarHBondContact O-N 2.72Å; E74-T76 VanDerWaalsContact C-N 3.33Å; E74-T76 PolarHBondContact O-N 3.23Å
75T55.5Low68.2Low133 Ų133121.7 Ų121.782%0.81669%0.691SS**  trans-58.4104.9170.848.10000105.3P73 G77P73-T75 PolarHBondContact O-N 3.48Å; T75-G77 PolarHBondContact O-N 3.36Å
76T55.8Low66.7Low130 Ų130126.3 Ų126.380%0.79872%0.719SS**  trans-62.791.417051.50000106.3E74 K78E74-T76 VanDerWaalsContact C-N 3.33Å; E74-T76 PolarHBondContact O-N 3.23Å; T76-K78 VanDerWaalsContact C-N 3.25Å; T76-K78 PolarHBondContact O-N 3.41Å
77G59.4Low64.9Low75 Ų75125.8 Ų125.877%0.77373%0.727SS**  trans-60.294.4164.200000107.2T75T75-G77 PolarHBondContact O-N 3.36Å
78K49.1Very low63Low198 Ų198127.9 Ų127.986%0.86174%0.736SS**  trans-92.2106.9154.4-87.4-177.5173179.20106T76T76-K78 VanDerWaalsContact C-N 3.25Å; T76-K78 PolarHBondContact O-N 3.41Å
79S46Very low61Low189 Ų189127.9 Ų127.9100%1.32275%0.748SS**  trans-55.70165.1-167.50000111.9

Retrieved 79 of 79 residues in 16.5 ms (Link to these results)