A0A093JI13_STRCA Loading...

U6 snRNA-associated Sm-like protein LSm3

Binds specifically to the 3'-terminal U-tract of U6 snRNA. Plays a role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.

AlphaFold DB , UniProt , Accession A0A093JI13, Species STRCA (Struthio camelus australis), Gene LSM3, Length 96 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1Q41.1Very low67.8Low249 Ų249136 Ų136100%1.16471%0.707SS**  0108.90-67.5174.49.800105.9Q3Q1-Q3 PolarHBondContact O-N 3.41Å
2Q44.4Very low69.8Low195 Ų195129.8 Ų129.891%0.91168%0.675SS**  trans-78.8115.4177.7-84.5170.5-4.200107.9T4Q2-T4 PolarHBondContact O-N 2.86Å; Q2-T4 VanDerWaalsContact O-N 3.15Å
3Q45.2Very low71.5Confident187 Ų187121.1 Ų121.187%0.87463%0.63SS**  trans-64.1106167.9-114.2166.5-16.500107.2Q1 T5Q1-Q3 PolarHBondContact O-N 3.41Å; Q3-T5 PolarHBondContact O-N 2.94Å; Q3-T5 VanDerWaalsContact O-N 3.08Å
4T56.1Low73Confident118 Ų118117.1 Ų117.172%0.72461%0.61SS**  trans-70.698.9163.842.70000106.9Q2 N6Q2-T4 PolarHBondContact O-N 2.86Å; Q2-T4 VanDerWaalsContact O-N 3.15Å; T4-N6 PolarHBondContact O-N 3.48Å
5T57.5Low74.4Confident75 Ų75110.3 Ų110.346%0.4657%0.574SS.*  trans-61.9124.316945.70000107.8Q3 T7Q3-T5 PolarHBondContact O-N 2.94Å; Q3-T5 VanDerWaalsContact O-N 3.08Å; T5-T7 WeakPolarHBondContact CB-OG1 3.37Å; T5-T7 PolarHBondContact O-N 3.13Å; T5-T7 PolarHBondContact OG1-OG1 3.46Å
6N65.5Low75.6Confident137 Ų137109.8 Ų109.873%0.73356%0.562SS**  trans-75.821.6174.3-78.9-15.7000112T4T4-N6 PolarHBondContact O-N 3.48Å
7T78.1Confident76.7Confident69 Ų69106 Ų10642%0.42354%0.543SS..  trans-84.9135.7178.146.60000109T5 E9T5-T7 WeakPolarHBondContact CB-OG1 3.37Å; T5-T7 PolarHBondContact O-N 3.13Å; T5-T7 PolarHBondContact OG1-OG1 3.46Å; T7-E9 PolarHBondContact O-N 3.22Å; T7-E9 PolarHBondContact OG1-OE1 3.47Å; T7-E9 VanDerWaalsContact OG1-OE1 3.13Å
8V85.8Confident77.7Confident79 Ų79100.2 Ų100.248%0.47951%0.513SS..  trans-83110.5171.11790000106.6D13 L14 L17V8-D13 HydrophobicContact CG1-CB 4.35Å; V8-L14 HydrophobicContact CG1-CD2 3.99Å; V8-L14 HydrophobicContact CG1-CG 3.91Å; V8-L14 HydrophobicContact CG2-CD2 3.7Å; V8-L14 HydrophobicContact CG2-CG 4.44Å; V8-L17 HydrophobicContact CG2-CD1 3.7Å
9E90.4Very high78.7Confident147 Ų14798.6 Ų98.669%0.68751%0.506SS*.  trans-107.1-36.3179.7-65.9179.8-169.200110.6T7 D13T7-E9 PolarHBondContact O-N 3.22Å; T7-E9 PolarHBondContact OG1-OE1 3.47Å; T7-E9 VanDerWaalsContact OG1-OE1 3.13Å; E9-D13 PolarHBondContact N-OD2 3.34Å
10E91.7Very high79.6Confident128 Ų12898.6 Ų98.660%0.59851%0.507SS*.SBendtrans-123.4156.2177.3-63.4-173.2170.700112.2L12 D13E10-L12 PolarHBondContact O-N 3.15Å; E10-L12 VanDerWaalsContact O-N 3.17Å; E10-D13 PolarHBondContact N-OD2 3.08Å; E10-D13 VanDerWaalsContact O-CB 3.26Å; E10-D13 WeakPolarHBondContact O-CB 3.39Å; E10-D13 PolarHBondContact O-N 3.16Å
11P89.8Confident80.4Confident112 Ų11297.1 Ų97.173%0.72750%0.498SS*.Hα-helixtrans-55-36.5178.9-27.535.4000114.3D13 L14P11-D13 PolarHBondContact O-N 2.95Å; P11-L14 PolarHBondContact O-N 3.3Å
12L92.6Very high83.1Confident62 Ų6291.3 Ų91.333%0.32547%0.465SS..Hα-helixtrans-70.4-18.1178.5-70.8179.9000113.2E10 L14 I15 R16 L44E10-L12 PolarHBondContact O-N 3.15Å; E10-L12 VanDerWaalsContact O-N 3.17Å; L12-L14 PolarHBondContact O-N 3.32Å; L12-I15 HydrophobicContact CD2-CG1 4.4Å; L12-I15 WeakPolarHBondContact O-CA 3.42Å; L12-I15 WeakPolarHBondContact O-CB 3.49Å; L12-I15 PolarHBondContact O-N 2.88Å; L12-R16 PolarHBondContact O-N 2.8Å; L12-L44 HydrophobicContact CD2-CD2 3.62Å; L12-L44 HydrophobicContact CD2-CG 4.27Å
13D92Very high85.6Confident16 Ų1682.2 Ų82.29%0.08642%0.423CS..Hα-helixtrans-62.9-31.4174.7-70.1-35.4000111.4V8 E9 E10 P11 I15 R16 L17V8-D13 HydrophobicContact CG1-CB 4.35Å; E9-D13 PolarHBondContact N-OD2 3.34Å; E10-D13 PolarHBondContact N-OD2 3.08Å; E10-D13 VanDerWaalsContact O-CB 3.26Å; E10-D13 WeakPolarHBondContact O-CB 3.39Å; E10-D13 PolarHBondContact O-N 3.16Å; P11-D13 PolarHBondContact O-N 2.95Å; D13-I15 PolarHBondContact O-N 3.17Å; D13-R16 WeakPolarHBondContact O-CB 3.26Å; D13-R16 PolarHBondContact O-N 3.05Å; D13-R16 IonicContact OD1-CZ 3.17Å; D13-R16 IonicContact OD1-NE 3.37Å; D13-R16 IonicContact OD1-NH1 3.47Å; D13-R16 PolarHBondContact OD1-NH1 2.83Å; D13-R16 IonicContact OD1-NH2 3.22Å; D13-R16 PolarHBondContact OD1-NH2 3.36Å; D13-L17 WeakPolarHBondContact O-CB 3.5Å; D13-L17 WeakPolarHBondContact O-CG 3.17Å; D13-L17 PolarHBondContact O-N 3.23Å
14L91.3Very high88.2Confident66 Ų6676 Ų7635%0.34639%0.392SS..Hα-helixtrans-61.2-36.8173.9-68.4172.7000111.7V8 P11 L12 S18V8-L14 HydrophobicContact CG1-CD2 3.99Å; V8-L14 HydrophobicContact CG1-CG 3.91Å; V8-L14 HydrophobicContact CG2-CD2 3.7Å; V8-L14 HydrophobicContact CG2-CG 4.44Å; P11-L14 PolarHBondContact O-N 3.3Å; L12-L14 PolarHBondContact O-N 3.32Å; L14-S18 PolarHBondContact O-N 3.36Å; L14-S18 PolarHBondContact O-OG 3.29Å
15I94.7Very high90.2Very high14 Ų1470.4 Ų70.47%0.07236%0.357CS..Hα-helixtrans-72.5-44176.5-51-52.6000109.9L12 D13 L17 S18 L19 L37 Y40 L44 V89L12-I15 HydrophobicContact CD2-CG1 4.4Å; L12-I15 WeakPolarHBondContact O-CA 3.42Å; L12-I15 WeakPolarHBondContact O-CB 3.49Å; L12-I15 PolarHBondContact O-N 2.88Å; D13-I15 PolarHBondContact O-N 3.17Å; I15-L17 VanDerWaalsContact C-N 3.3Å; I15-L17 PolarHBondContact O-N 3.35Å; I15-S18 WeakPolarHBondContact O-CA 3.35Å; I15-S18 PolarHBondContact O-N 3.43Å; I15-L19 PolarHBondContact O-N 3.29Å; I15-L37 HydrophobicContact CG2-CD2 3.72Å; I15-Y40 HydrophobicContact CB-CD2 4.41Å; I15-Y40 HydrophobicContact CB-CE2 4.29Å; I15-Y40 HydrophobicContact CG2-CD1 3.8Å; I15-Y40 HydrophobicContact CG2-CD2 3.73Å; I15-Y40 HydrophobicContact CG2-CE1 4.12Å; I15-Y40 HydrophobicContact CG2-CE2 4.04Å; I15-Y40 HydrophobicContact CG2-CG 3.63Å; I15-L44 HydrophobicContact CG1-CD2 4.12Å; I15-L44 HydrophobicContact CG2-CD2 4.43Å; I15-V89 HydrophobicContact CD1-CB 3.97Å; I15-V89 HydrophobicContact CD1-CG1 3.58Å
16R93.8Very high92.1Very high102 Ų10268.9 Ų68.939%0.38534%0.344SS..Hα-helixtrans-53.4-47.7173.8-167.3176.366.5-173.7-2.7112.1L12 D13 S18 L19 Y40L12-R16 PolarHBondContact O-N 2.8Å; D13-R16 WeakPolarHBondContact O-CB 3.26Å; D13-R16 PolarHBondContact O-N 3.05Å; D13-R16 IonicContact OD1-CZ 3.17Å; D13-R16 IonicContact OD1-NE 3.37Å; D13-R16 IonicContact OD1-NH1 3.47Å; D13-R16 PolarHBondContact OD1-NH1 2.83Å; D13-R16 IonicContact OD1-NH2 3.22Å; D13-R16 PolarHBondContact OD1-NH2 3.36Å; R16-S18 PolarHBondContact O-N 3.01Å; R16-L19 WeakPolarHBondContact O-CG 3.4Å; R16-L19 PolarHBondContact O-N 2.94Å; R16-Y40 WeakPolarHBondContact CA-OH 3.39Å; R16-Y40 HydrophobicContact CB-CE1 4.44Å; R16-Y40 WeakPolarHBondContact CB-OH 3.42Å
17L93.4Very high93.7Very high46 Ų4663.1 Ų63.124%0.24131%0.313CS..THydrogen-bonded Turntrans-69.1-15.2179.7-67.9170.6000112.7V8 D13 I15 R94V8-L17 HydrophobicContact CG2-CD1 3.7Å; D13-L17 WeakPolarHBondContact O-CB 3.5Å; D13-L17 WeakPolarHBondContact O-CG 3.17Å; D13-L17 PolarHBondContact O-N 3.23Å; I15-L17 VanDerWaalsContact C-N 3.3Å; I15-L17 PolarHBondContact O-N 3.35Å; L17-R94 PolarHBondContact O-NH2 2.83Å; L17-R94 VanDerWaalsContact O-NH2 3.15Å
18S94.8Very high94.5Very high1 Ų167.4 Ų67.41%0.00732%0.322CS..THydrogen-bonded Turntrans-97.6-2.9178.2-50.20000113.8L14 I15 R16 D20 E21 P91 R94L14-S18 PolarHBondContact O-N 3.36Å; L14-S18 PolarHBondContact O-OG 3.29Å; I15-S18 WeakPolarHBondContact O-CA 3.35Å; I15-S18 PolarHBondContact O-N 3.43Å; R16-S18 PolarHBondContact O-N 3.01Å; S18-D20 PolarHBondContact O-N 2.99Å; S18-E21 WeakPolarHBondContact O-CB 3.39Å; S18-E21 PolarHBondContact O-N 3.18Å; S18-P91 VanDerWaalsContact OG-CB 3.27Å; S18-P91 WeakPolarHBondContact OG-CB 3.29Å; S18-R94 PolarHBondContact OG-NH2 2.97Å
19L96.5Very high94.9Very high71 Ų7170.6 Ų70.637%0.37234%0.336SS..THydrogen-bonded Turn17.189.9122.7-4.3147.5000117.4I15 R16 E21 L37 Y40I15-L19 PolarHBondContact O-N 3.29Å; R16-L19 WeakPolarHBondContact O-CG 3.4Å; R16-L19 PolarHBondContact O-N 2.94Å; L19-E21 PolarHBondContact O-N 2.76Å; L19-E21 VanDerWaalsContact O-N 3.08Å; L19-L37 HydrophobicContact CD2-CD2 4.12Å; L19-L37 HydrophobicContact CD2-CG 3.93Å; L19-Y40 HydrophobicContact CD1-CE1 4.1Å; L19-Y40 HydrophobicContact CD2-CD1 4.15Å; L19-Y40 HydrophobicContact CD2-CE1 4.41Å; L19-Y40 HydrophobicContact CG-CD1 4.48Å; L19-Y40 HydrophobicContact CG-CE1 4.25Å
20D96.9Very high95.2Very high97 Ų9767.6 Ų67.652%0.51932%0.324SS..THydrogen-bonded Turntrans70.13.3171.1-155.260.4000114.8S18 R36 L37S18-D20 PolarHBondContact O-N 2.99Å; D20-R36 WeakPolarHBondContact O-CG 3.48Å; D20-R36 PolarHBondContact O-NE 2.86Å; D20-R36 IonicContact OD1-CZ 3.52Å; D20-R36 IonicContact OD1-NE 3.79Å; D20-R36 PolarHBondContact OD1-NE 2.91Å; D20-R36 IonicContact OD1-NH1 2.67Å; D20-R36 PolarHBondContact OD1-NH1 2.74Å; D20-R36 IonicContact OD1-NH2 3.03Å; D20-R36 PolarHBondContact OD1-NH2 3.49Å; D20-R36 IonicContact OD2-CZ 2.74Å; D20-R36 IonicContact OD2-NE 2.74Å; D20-R36 IonicContact OD2-NH2 2.84Å; D20-R36 PolarHBondContact OD2-NH2 2.85Å; D20-L37 WeakPolarHBondContact CA-O 3.35Å; D20-L37 PolarHBondContact N-O 3.37Å
21E97Very high95.4Very high69 Ų6964.9 Ų64.932%0.32231%0.309SS..SBendtrans-99.5162.6179.4-54.3-170.1108.100112.1S18 L19 R36 L37 P92 R94S18-E21 WeakPolarHBondContact O-CB 3.39Å; S18-E21 PolarHBondContact O-N 3.18Å; L19-E21 PolarHBondContact O-N 2.76Å; L19-E21 VanDerWaalsContact O-N 3.08Å; E21-R36 CarbonylContact O-C 3.59Å; E21-R36 VanDerWaalsContact O-CA 3.31Å; E21-R36 WeakPolarHBondContact O-CA 3.16Å; E21-L37 PolarHBondContact O-N 3.34Å; E21-P92 HydrophobicContact CB-CG 3.86Å; E21-P92 VanDerWaalsContact CD-CG 3.43Å; E21-P92 HydrophobicContact CG-CG 4.26Å; E21-P92 WeakPolarHBondContact OE2-CG 3.43Å; E21-R94 IonicContact OE2-CZ 3.6Å; E21-R94 IonicContact OE2-NH2 3.17Å; E21-R94 PolarHBondContact OE2-NH2 3.36Å
22R97.3Very high95.9Very high126 Ų12661.4 Ų61.448%0.47528%0.283SS..EExtended strand (participates in β ladder)trans-82.8120.5174-174.7167.9-80.4-103.5-5.4110.2R34 G35 D50R22-R34 PolarHBondContact NH1-O 2.96Å; R22-G35 CarbonylContact C-O 3.54Å; R22-G35 WeakPolarHBondContact CA-O 3.36Å; R22-D50 PolarHBondContact NH1-O 2.85Å; R22-D50 PolarHBondContact NH2-O 3.44Å
23I97.8Very high96.2Very high5 Ų558.4 Ų58.43%0.02627%0.267CS..EExtended strand (participates in β ladder)trans-113161.8-179.764.6166.1000111.4V25 R34 G35 L37 M46 L48 V89I23-V25 HydrophobicContact CD1-CG2 3.69Å; I23-V25 HydrophobicContact CG1-CG2 4.14Å; I23-R34 WeakPolarHBondContact O-CA 3.45Å; I23-G35 PolarHBondContact N-O 3.16Å; I23-G35 PolarHBondContact O-N 2.96Å; I23-L37 HydrophobicContact CD1-CB 3.99Å; I23-L37 HydrophobicContact CD1-CD1 4.18Å; I23-L37 HydrophobicContact CD1-CD2 4.27Å; I23-L37 HydrophobicContact CD1-CG 4.36Å; I23-L37 HydrophobicContact CG1-CB 4.23Å; I23-L37 HydrophobicContact CG2-CB 4.35Å; I23-M46 HydrophobicContact CD1-SD 4.06Å; I23-L48 HydrophobicContact CD1-CD2 4Å; I23-L48 HydrophobicContact CG1-CD2 4.3Å; I23-V89 HydrophobicContact CD1-CG1 3.97Å
24Y98.3Very high96.5Very high57 Ų5762.1 Ų62.122%0.22428%0.28CS..EExtended strand (participates in β ladder)trans-107.1134.3168.2169.7-96.7000110.2K26 E32 L33 R34 L88 V89 A90Y24-K26 HydrophobicContact CE1-CB 4.03Å; Y24-E32 HydrophobicContact CE2-CB 4Å; Y24-E32 HydrophobicContact CE2-CG 4.05Å; Y24-E32 VanDerWaalsContact CE2-OE2 3.26Å; Y24-E32 WeakPolarHBondContact CE2-OE2 3.28Å; Y24-E32 WeakPolarHBondContact OH-CG 3.38Å; Y24-E32 PolarHBondContact OH-OE1 3.44Å; Y24-E32 PolarHBondContact OH-OE2 2.84Å; Y24-L33 WeakPolarHBondContact CA-O 3.23Å; Y24-R34 HydrophobicContact CD2-CG 3.87Å; Y24-L88 HydrophobicContact CD1-CD2 3.9Å; Y24-L88 HydrophobicContact CE1-CD2 3.89Å; Y24-V89 WeakPolarHBondContact O-CA 3.42Å; Y24-A90 HydrophobicContact CD1-CB 4.09Å; Y24-A90 PolarHBondContact N-O 2.86Å; Y24-A90 PolarHBondContact O-N 3.4Å
25V98.4Very high96.8Very high0 Ų059 Ų590%026%0.263CS..EExtended strand (participates in β ladder)trans-128119.5177-173.30000109.1I23 M27 E32 L33 M46 L48 V86 L88 V89I23-V25 HydrophobicContact CD1-CG2 3.69Å; I23-V25 HydrophobicContact CG1-CG2 4.14Å; V25-M27 HydrophobicContact CG1-CG 4.43Å; V25-M27 HydrophobicContact CG1-SD 3.68Å; V25-E32 WeakPolarHBondContact O-CA 3.27Å; V25-L33 HydrophobicContact CB-CB 4.25Å; V25-L33 PolarHBondContact N-O 3.15Å; V25-L33 PolarHBondContact O-N 3.26Å; V25-M46 HydrophobicContact CG1-CE 4.07Å; V25-M46 HydrophobicContact CG2-CE 4.24Å; V25-M46 HydrophobicContact CG2-SD 4.27Å; V25-L48 HydrophobicContact CG2-CD1 4.37Å; V25-V86 HydrophobicContact CG1-CG1 4Å; V25-V86 HydrophobicContact CG1-CG2 4.23Å; V25-L88 CarbonylContact C-O 3.48Å; V25-L88 WeakPolarHBondContact CA-O 3.23Å; V25-V89 HydrophobicContact CG1-CG2 4.4Å; V25-V89 HydrophobicContact CG2-CG1 4.39Å
26K98.3Very high97Very high43 Ų4362.5 Ų62.519%0.18728%0.276CS..EExtended strand (participates in β ladder)trans-90123.3167.4-174.967.4171.2-178.20108Y24 D30 E32 V87 L88Y24-K26 HydrophobicContact CE1-CB 4.03Å; K26-D30 IonicContact NZ-OD1 3.73Å; K26-D30 PolarHBondContact NZ-OD1 3.34Å; K26-E32 HydrophobicContact CD-CG 3.43Å; K26-E32 VanDerWaalsContact CD-CG 3.43Å; K26-E32 IonicContact NZ-OE1 3.3Å; K26-E32 PolarHBondContact NZ-OE1 2.68Å; K26-V87 PolarHBondContact O-N 2.83Å; K26-L88 HydrophobicContact CB-CB 4.15Å; K26-L88 PolarHBondContact N-O 3.22Å; K26-L88 PolarHBondContact O-N 3.44Å
27M98.2Very high97.2Very high15 Ų1557.6 Ų57.67%0.07426%0.257CS..EExtended strand (participates in β ladder)trans-99.3167.2174.5-57-64.8-70.400109.6V25 R31 L33 V81 G85 V86V25-M27 HydrophobicContact CG1-CG 4.43Å; V25-M27 HydrophobicContact CG1-SD 3.68Å; M27-R31 WeakPolarHBondContact CA-O 3.14Å; M27-R31 HydrophobicContact CB-CB 4.06Å; M27-R31 HydrophobicContact CB-CG 4.25Å; M27-R31 WeakPolarHBondContact CB-O 3.47Å; M27-R31 HydrophobicContact CG-CG 4.39Å; M27-R31 PolarHBondContact N-O 3.28Å; M27-L33 HydrophobicContact CG-CD1 4.02Å; M27-L33 HydrophobicContact CG-CG 4.25Å; M27-L33 HydrophobicContact SD-CD1 4.27Å; M27-V81 HydrophobicContact CE-CG1 3.51Å; M27-V81 HydrophobicContact SD-CG1 3.7Å; M27-G85 CarbonylContact C-O 3.5Å; M27-G85 VanDerWaalsContact CA-O 3.23Å; M27-G85 WeakPolarHBondContact CA-O 3.46Å; M27-G85 VanDerWaalsContact CE-C 3.47Å; M27-V86 HydrophobicContact CE-CG2 4.17Å; M27-V86 HydrophobicContact SD-CB 4.36Å; M27-V86 HydrophobicContact SD-CG2 3.73Å
28R96.7Very high97.4Very high160 Ų16059.1 Ų59.160%0.60426%0.263SS*.SBendtrans-58.8160.5165.2-62.1-179.1-170.3-160.43.3110.9D84 G85 V87R28-D84 VanDerWaalsContact CZ-O 3.3Å; R28-D84 PolarHBondContact NE-O 2.88Å; R28-D84 VanDerWaalsContact NE-O 3.14Å; R28-D84 PolarHBondContact NH2-O 2.93Å; R28-D84 VanDerWaalsContact NH2-O 3.1Å; R28-G85 PolarHBondContact N-O 2.9Å; R28-V87 HydrophobicContact CG-CG2 3.71Å
29N94Very high97.6Very high145 Ų14561.1 Ų61.178%0.77528%0.28SS*.THydrogen-bonded Turntrans60.545.3175.6-49.8-22.1000113.5R31N29-R31 PolarHBondContact O-N 3.05Å
30D95.1Very high97.7Very high84 Ų8460.9 Ų60.945%0.44927%0.274SS..THydrogen-bonded Turntrans50.335.7174.1-67.7-60.7000115.7K26 T56K26-D30 IonicContact NZ-OD1 3.73Å; K26-D30 PolarHBondContact NZ-OD1 3.34Å; D30-T56 PolarHBondContact O-N 2.87Å
31R97.7Very high97.7Very high72 Ų7259.1 Ų59.127%0.27227%0.265SS..EExtended strand (participates in β ladder)trans-104.1134.7174.3177176.4178.8-148.40.3110.4M27 N29 E53 T54 V55M27-R31 WeakPolarHBondContact CA-O 3.14Å; M27-R31 HydrophobicContact CB-CB 4.06Å; M27-R31 HydrophobicContact CB-CG 4.25Å; M27-R31 WeakPolarHBondContact CB-O 3.47Å; M27-R31 HydrophobicContact CG-CG 4.39Å; M27-R31 PolarHBondContact N-O 3.28Å; N29-R31 PolarHBondContact O-N 3.05Å; R31-E53 HydrophobicContact CG-CG 4.34Å; R31-E53 IonicContact CZ-OE1 2.76Å; R31-E53 IonicContact NE-OE1 2.65Å; R31-E53 PolarHBondContact NE-OE1 3.1Å; R31-E53 IonicContact NH2-OE1 3.86Å; R31-E53 PolarHBondContact NH2-OE1 3.14Å; R31-T54 CarbonylContact C-O 3.55Å; R31-T54 WeakPolarHBondContact CA-O 3.25Å; R31-V55 HydrophobicContact CB-CG2 4.34Å; R31-V55 HydrophobicContact CG-CG2 4.07Å
32E98.5Very high97.7Very high38 Ų3863.2 Ų63.218%0.17828%0.284CS..EExtended strand (participates in β ladder)trans-130.5138.7-177.5-69179-153.200109.9Y24 V25 K26 R34 E53 T54Y24-E32 HydrophobicContact CE2-CB 4Å; Y24-E32 HydrophobicContact CE2-CG 4.05Å; Y24-E32 VanDerWaalsContact CE2-OE2 3.26Å; Y24-E32 WeakPolarHBondContact CE2-OE2 3.28Å; Y24-E32 WeakPolarHBondContact OH-CG 3.38Å; Y24-E32 PolarHBondContact OH-OE1 3.44Å; Y24-E32 PolarHBondContact OH-OE2 2.84Å; V25-E32 WeakPolarHBondContact O-CA 3.27Å; K26-E32 HydrophobicContact CD-CG 3.43Å; K26-E32 VanDerWaalsContact CD-CG 3.43Å; K26-E32 IonicContact NZ-OE1 3.3Å; K26-E32 PolarHBondContact NZ-OE1 2.68Å; E32-R34 IonicContact OE2-NH2 2.83Å; E32-E53 CarbonylContact O-C 3.56Å; E32-E53 WeakPolarHBondContact O-CA 3.48Å; E32-T54 PolarHBondContact N-O 2.87Å; E32-T54 PolarHBondContact O-N 2.95Å
33L98.6Very high97.6Very high0 Ų062.7 Ų62.70%029%0.287CS..EExtended strand (participates in β ladder)trans-123.6134179-51.7173000109.2Y24 V25 M27 L48 V51 E53 L79 V81Y24-L33 WeakPolarHBondContact CA-O 3.23Å; V25-L33 HydrophobicContact CB-CB 4.25Å; V25-L33 PolarHBondContact N-O 3.15Å; V25-L33 PolarHBondContact O-N 3.26Å; M27-L33 HydrophobicContact CG-CD1 4.02Å; M27-L33 HydrophobicContact CG-CG 4.25Å; M27-L33 HydrophobicContact SD-CD1 4.27Å; L33-L48 HydrophobicContact CB-CD1 4.29Å; L33-L48 HydrophobicContact CD1-CD1 4.21Å; L33-V51 HydrophobicContact CB-CG1 4.1Å; L33-V51 HydrophobicContact CD2-CG1 4.04Å; L33-E53 HydrophobicContact CD2-CB 3.8Å; L33-E53 HydrophobicContact CD2-CG 3.76Å; L33-L79 HydrophobicContact CD1-CD2 3.87Å; L33-L79 HydrophobicContact CD2-CD2 3.92Å; L33-V81 HydrophobicContact CD1-CG1 4.31Å; L33-V81 HydrophobicContact CD1-CG2 3.6Å
34R98.4Very high97.6Very high93 Ų9364.4 Ų64.435%0.35130%0.296SS..EExtended strand (participates in β ladder)trans-123.1112.2167.5-69.2-179.2-17984.27.7108.3R22 I23 Y24 E32 V51 E52R22-R34 PolarHBondContact NH1-O 2.96Å; I23-R34 WeakPolarHBondContact O-CA 3.45Å; Y24-R34 HydrophobicContact CD2-CG 3.87Å; E32-R34 IonicContact OE2-NH2 2.83Å; R34-V51 CarbonylContact O-C 3.59Å; R34-V51 WeakPolarHBondContact O-CA 3.36Å; R34-E52 PolarHBondContact N-O 2.65Å; R34-E52 PolarHBondContact O-N 3.3Å
35G98.3Very high97.6Very high0 Ų063 Ų630%029%0.292CS..EExtended strand (participates in β ladder)trans-159.2167.9-173.900000112.5R22 I23 G49R22-G35 CarbonylContact C-O 3.54Å; R22-G35 WeakPolarHBondContact CA-O 3.36Å; I23-G35 PolarHBondContact N-O 3.16Å; I23-G35 PolarHBondContact O-N 2.96Å; G35-G49 WeakPolarHBondContact CA-O 3.42Å
36R98.4Very high97.6Very high88 Ų8863 Ų6333%0.33229%0.292SS..EExtended strand (participates in β ladder)trans-80.9125.7177.9-170177.3-175.7-141.116.9110.3D20 E21 H38 L48 G49D20-R36 WeakPolarHBondContact O-CG 3.48Å; D20-R36 PolarHBondContact O-NE 2.86Å; D20-R36 IonicContact OD1-CZ 3.52Å; D20-R36 IonicContact OD1-NE 3.79Å; D20-R36 PolarHBondContact OD1-NE 2.91Å; D20-R36 IonicContact OD1-NH1 2.67Å; D20-R36 PolarHBondContact OD1-NH1 2.74Å; D20-R36 IonicContact OD1-NH2 3.03Å; D20-R36 PolarHBondContact OD1-NH2 3.49Å; D20-R36 IonicContact OD2-CZ 2.74Å; D20-R36 IonicContact OD2-NE 2.74Å; D20-R36 IonicContact OD2-NH2 2.84Å; D20-R36 PolarHBondContact OD2-NH2 2.85Å; E21-R36 CarbonylContact O-C 3.59Å; E21-R36 VanDerWaalsContact O-CA 3.31Å; E21-R36 WeakPolarHBondContact O-CA 3.16Å; R36-H38 PolarHBondContact O-CD2 2.96Å; R36-H38 PolarHBondContact O-N 2.94Å; R36-L48 CarbonylContact O-C 3.56Å; R36-L48 VanDerWaalsContact O-CA 3.24Å; R36-L48 WeakPolarHBondContact O-CA 3.42Å; R36-G49 PolarHBondContact N-O 3.19Å; R36-G49 PolarHBondContact O-N 3.08Å
37L98.5Very high97.6Very high0 Ų063.6 Ų63.60%030%0.297CS..EExtended strand (participates in β ladder)trans-79113.2179.6-17963.4000110.8I15 L19 D20 E21 I23 A39 Y40 M46 L48I15-L37 HydrophobicContact CG2-CD2 3.72Å; L19-L37 HydrophobicContact CD2-CD2 4.12Å; L19-L37 HydrophobicContact CD2-CG 3.93Å; D20-L37 WeakPolarHBondContact CA-O 3.35Å; D20-L37 PolarHBondContact N-O 3.37Å; E21-L37 PolarHBondContact O-N 3.34Å; I23-L37 HydrophobicContact CD1-CB 3.99Å; I23-L37 HydrophobicContact CD1-CD1 4.18Å; I23-L37 HydrophobicContact CD1-CD2 4.27Å; I23-L37 HydrophobicContact CD1-CG 4.36Å; I23-L37 HydrophobicContact CG1-CB 4.23Å; I23-L37 HydrophobicContact CG2-CB 4.35Å; L37-A39 WeakPolarHBondContact CD1-O 3.49Å; L37-Y40 HydrophobicContact CD2-CD1 4.4Å; L37-M46 HydrophobicContact CD1-CB 4.05Å; L37-M46 HydrophobicContact CD1-CG 3.93Å; L37-M46 HydrophobicContact CD1-SD 4.16Å; L37-L48 HydrophobicContact CB-CD2 4.28Å; L37-L48 HydrophobicContact CD1-CD2 3.73Å
38H98.3Very high97.7Very high77 Ų7762.9 Ų62.936%0.35629%0.293SS..EExtended strand (participates in β ladder)trans-94.3-37.9178.7-75.1-150.2000112.4R36 I47R36-H38 PolarHBondContact O-CD2 2.96Å; R36-H38 PolarHBondContact O-N 2.94Å; H38-I47 HydrophobicContact CB-CB 4.21Å; H38-I47 HydrophobicContact CB-CG2 3.99Å; H38-I47 WeakPolarHBondContact CB-O 3.39Å; H38-I47 PolarHBondContact N-O 3.38Å
39A98.3Very high97.8Very high43 Ų4355.3 Ų55.336%0.35527%0.265SS..EExtended strand (participates in β ladder)trans-158.3156.6-179.600000111L37 M46 I47L37-A39 WeakPolarHBondContact CD1-O 3.49Å; A39-M46 WeakPolarHBondContact O-CA 3.4Å; A39-I47 HydrophobicContact CB-CB 4.2Å; A39-I47 HydrophobicContact CB-CG1 4.14Å; A39-I47 PolarHBondContact N-O 2.82Å; A39-I47 PolarHBondContact O-N 2.85Å
40Y98.3Very high98Very high67 Ų6753.3 Ų53.326%0.26325%0.254SS..EExtended strand (participates in β ladder)trans-149.1168.1171.672.4-74.9000111.5I15 R16 L19 L37 N45I15-Y40 HydrophobicContact CB-CD2 4.41Å; I15-Y40 HydrophobicContact CB-CE2 4.29Å; I15-Y40 HydrophobicContact CG2-CD1 3.8Å; I15-Y40 HydrophobicContact CG2-CD2 3.73Å; I15-Y40 HydrophobicContact CG2-CE1 4.12Å; I15-Y40 HydrophobicContact CG2-CE2 4.04Å; I15-Y40 HydrophobicContact CG2-CG 3.63Å; R16-Y40 WeakPolarHBondContact CA-OH 3.39Å; R16-Y40 HydrophobicContact CB-CE1 4.44Å; R16-Y40 WeakPolarHBondContact CB-OH 3.42Å; L19-Y40 HydrophobicContact CD1-CE1 4.1Å; L19-Y40 HydrophobicContact CD2-CD1 4.15Å; L19-Y40 HydrophobicContact CD2-CE1 4.41Å; L19-Y40 HydrophobicContact CG-CD1 4.48Å; L19-Y40 HydrophobicContact CG-CE1 4.25Å; L37-Y40 HydrophobicContact CD2-CD1 4.4Å; Y40-N45 CarbonylContact C-O 3.57Å; Y40-N45 WeakPolarHBondContact CA-O 3.31Å
41D97.4Very high98.1Very high59 Ų5949.3 Ų49.332%0.31623%0.233SC..  trans-127.9-178.3170.271.313.1000112.4H43 L44 N45D41-H43 PolarHBondContact O-N 2.88Å; D41-H43 VanDerWaalsContact O-N 3.16Å; D41-H43 WeakPolarHBondContact OD1-CA 3.39Å; D41-H43 WeakPolarHBondContact OD1-CB 3.46Å; D41-H43 PolarHBondContact OD1-N 3.22Å; D41-L44 PolarHBondContact O-N 3.03Å; D41-L44 PolarHBondContact OD1-N 2.82Å; D41-N45 PolarHBondContact N-O 2.86Å; D41-N45 VanDerWaalsContact N-O 3.16Å; D41-N45 WeakPolarHBondContact OD1-CB 3.39Å; D41-N45 PolarHBondContact OD1-N 2.85Å; D41-N45 PolarHBondContact OD1-ND2 2.9Å; D41-N45 WeakPolarHBondContact OD2-CB 3.47Å; D41-N45 PolarHBondContact OD2-ND2 2.81Å
42Q96.1Very high98.2Very high155 Ų15548.4 Ų48.472%0.72423%0.232SC*.THydrogen-bonded Turntrans-61.1-20.8179.469.2-174.5-4200114.4L44Q42-L44 VanDerWaalsContact C-N 3.32Å
43H96.7Very high98.2Very high115 Ų11547 Ų4753%0.53223%0.225SC..THydrogen-bonded Turntrans-90.8-0.7178.2-57.1-63.4000111.9D41 N45 G83D41-H43 PolarHBondContact O-N 2.88Å; D41-H43 VanDerWaalsContact O-N 3.16Å; D41-H43 WeakPolarHBondContact OD1-CA 3.39Å; D41-H43 WeakPolarHBondContact OD1-CB 3.46Å; D41-H43 PolarHBondContact OD1-N 3.22Å; H43-N45 PolarHBondContact O-N 2.82Å; H43-G83 VanDerWaalsContact O-CA 3.29Å; H43-G83 WeakPolarHBondContact O-CA 3.15Å
44L97.2Very high98.2Very high42 Ų4247.5 Ų47.522%0.2223%0.228CC..  trans59.831.2-168.9-60.1175.6000113L12 I15 D41 Q42 M46 G83L12-L44 HydrophobicContact CD2-CD2 3.62Å; L12-L44 HydrophobicContact CD2-CG 4.27Å; I15-L44 HydrophobicContact CG1-CD2 4.12Å; I15-L44 HydrophobicContact CG2-CD2 4.43Å; D41-L44 PolarHBondContact O-N 3.03Å; D41-L44 PolarHBondContact OD1-N 2.82Å; Q42-L44 VanDerWaalsContact C-N 3.32Å; L44-M46 HydrophobicContact CB-CE 4.45Å; L44-M46 WeakPolarHBondContact O-CE 3.37Å; L44-G83 VanDerWaalsContact O-CA 3.28Å; L44-G83 WeakPolarHBondContact O-CA 3.45Å
45N98.4Very high98.1Very high26 Ų2644.7 Ų44.714%0.13922%0.221CC..  trans-65.6134.8155.6-59-50.2000107.6Y40 D41 H43 F80 V81 R82 G83Y40-N45 CarbonylContact C-O 3.57Å; Y40-N45 WeakPolarHBondContact CA-O 3.31Å; D41-N45 PolarHBondContact N-O 2.86Å; D41-N45 VanDerWaalsContact N-O 3.16Å; D41-N45 WeakPolarHBondContact OD1-CB 3.39Å; D41-N45 PolarHBondContact OD1-N 2.85Å; D41-N45 PolarHBondContact OD1-ND2 2.9Å; D41-N45 WeakPolarHBondContact OD2-CB 3.47Å; D41-N45 PolarHBondContact OD2-ND2 2.81Å; H43-N45 PolarHBondContact O-N 2.82Å; N45-F80 HydrophobicContact CB-CE2 4.01Å; N45-F80 HydrophobicContact CB-CZ 4.08Å; N45-V81 CarbonylContact C-O 3.49Å; N45-V81 VanDerWaalsContact CA-O 3.25Å; N45-V81 WeakPolarHBondContact CA-O 3.47Å; N45-R82 WeakPolarHBondContact OD1-CA 3.24Å; N45-G83 PolarHBondContact OD1-N 2.85Å
46M98.5Very high98Very high1 Ų146.7 Ų46.71%0.00523%0.233CC..EExtended strand (participates in β ladder)trans-131.6146.8-173.1-67.5174.8-93.700111.8I23 V25 L37 A39 L44 L48 F80 V81 V86 V89I23-M46 HydrophobicContact CD1-SD 4.06Å; V25-M46 HydrophobicContact CG1-CE 4.07Å; V25-M46 HydrophobicContact CG2-CE 4.24Å; V25-M46 HydrophobicContact CG2-SD 4.27Å; L37-M46 HydrophobicContact CD1-CB 4.05Å; L37-M46 HydrophobicContact CD1-CG 3.93Å; L37-M46 HydrophobicContact CD1-SD 4.16Å; A39-M46 WeakPolarHBondContact O-CA 3.4Å; L44-M46 HydrophobicContact CB-CE 4.45Å; L44-M46 WeakPolarHBondContact O-CE 3.37Å; M46-L48 HydrophobicContact CB-CD2 4.19Å; M46-L48 HydrophobicContact CB-CG 4.39Å; M46-F80 WeakPolarHBondContact O-CA 3.32Å; M46-V81 HydrophobicContact CB-CB 4.26Å; M46-V81 HydrophobicContact CE-CG1 4.49Å; M46-V81 PolarHBondContact N-O 3.24Å; M46-V81 PolarHBondContact O-N 2.87Å; M46-V86 HydrophobicContact CE-CB 4.49Å; M46-V86 HydrophobicContact CE-CG1 4.19Å; M46-V86 HydrophobicContact CE-CG2 3.5Å; M46-V89 HydrophobicContact CE-CG2 4.05Å
47I98.6Very high97.8Very high56 Ų5645.3 Ų45.329%0.28724%0.235SC..EExtended strand (participates in β ladder)trans-104.8117.6163.7-56.5-67.7000107.2H38 A39 M78 F80H38-I47 HydrophobicContact CB-CB 4.21Å; H38-I47 HydrophobicContact CB-CG2 3.99Å; H38-I47 WeakPolarHBondContact CB-O 3.39Å; H38-I47 PolarHBondContact N-O 3.38Å; A39-I47 HydrophobicContact CB-CB 4.2Å; A39-I47 HydrophobicContact CB-CG1 4.14Å; A39-I47 PolarHBondContact N-O 2.82Å; A39-I47 PolarHBondContact O-N 2.85Å; I47-M78 HydrophobicContact CG2-CE 3.38Å; I47-F80 HydrophobicContact CD1-CB 4.15Å; I47-F80 HydrophobicContact CD1-CD2 3.67Å; I47-F80 HydrophobicContact CD1-CG 4.4Å
48L98.8Very high97.5Very high0 Ų049.7 Ų49.70%026%0.257CS..EExtended strand (participates in β ladder)trans-113135.9177.7-55.5-176.7000110.7I23 V25 L33 R36 L37 M46 V51 M78 L79 V81I23-L48 HydrophobicContact CD1-CD2 4Å; I23-L48 HydrophobicContact CG1-CD2 4.3Å; V25-L48 HydrophobicContact CG2-CD1 4.37Å; L33-L48 HydrophobicContact CB-CD1 4.29Å; L33-L48 HydrophobicContact CD1-CD1 4.21Å; R36-L48 CarbonylContact O-C 3.56Å; R36-L48 VanDerWaalsContact O-CA 3.24Å; R36-L48 WeakPolarHBondContact O-CA 3.42Å; L37-L48 HydrophobicContact CB-CD2 4.28Å; L37-L48 HydrophobicContact CD1-CD2 3.73Å; M46-L48 HydrophobicContact CB-CD2 4.19Å; M46-L48 HydrophobicContact CB-CG 4.39Å; L48-V51 HydrophobicContact CB-CG2 3.43Å; L48-V51 VanDerWaalsContact CB-CG2 3.43Å; L48-V51 HydrophobicContact CD1-CG2 4.5Å; L48-M78 CarbonylContact O-C 3.52Å; L48-M78 WeakPolarHBondContact O-CA 3.34Å; L48-L79 PolarHBondContact N-O 2.79Å; L48-L79 PolarHBondContact O-N 2.86Å; L48-V81 HydrophobicContact CD1-CG2 3.89Å; L48-V81 HydrophobicContact CG-CG2 4.19Å
49G98.7Very high97.1Very high1 Ų150.3 Ų50.31%0.0126%0.261CS..EExtended strand (participates in β ladder)trans-104157.3170.500000112.4G35 R36 V51 P77G35-G49 WeakPolarHBondContact CA-O 3.42Å; R36-G49 PolarHBondContact N-O 3.19Å; R36-G49 PolarHBondContact O-N 3.08Å; G49-V51 VanDerWaalsContact C-N 3.3Å; G49-V51 PolarHBondContact O-N 2.88Å; G49-P77 CarbonylContact C-O 3.58Å; G49-P77 WeakPolarHBondContact CA-O 3.38Å
50D98.5Very high96.8Very high102 Ų10253.8 Ų53.855%0.54527%0.272SS..EExtended strand (participates in β ladder)trans49.147.6175.1-57.8-46000113.3R22 P77R22-D50 PolarHBondContact NH1-O 2.85Å; R22-D50 PolarHBondContact NH2-O 3.44Å; D50-P77 PolarHBondContact N-O 3.33Å
51V98.8Very high96.3Very high0 Ų053.1 Ų53.10%027%0.273CS..EExtended strand (participates in β ladder)trans-81.8126.1-168.8-1740000110.8L33 R34 L48 G49 N75 I76 L79L33-V51 HydrophobicContact CB-CG1 4.1Å; L33-V51 HydrophobicContact CD2-CG1 4.04Å; R34-V51 CarbonylContact O-C 3.59Å; R34-V51 WeakPolarHBondContact O-CA 3.36Å; L48-V51 HydrophobicContact CB-CG2 3.43Å; L48-V51 VanDerWaalsContact CB-CG2 3.43Å; L48-V51 HydrophobicContact CD1-CG2 4.5Å; G49-V51 VanDerWaalsContact C-N 3.3Å; G49-V51 PolarHBondContact O-N 2.88Å; V51-N75 CarbonylContact O-C 3.58Å; V51-N75 VanDerWaalsContact O-CA 3.27Å; V51-N75 WeakPolarHBondContact O-CA 3.43Å; V51-I76 HydrophobicContact CB-CB 4.29Å; V51-I76 PolarHBondContact N-O 2.74Å; V51-I76 PolarHBondContact O-N 3.36Å; V51-L79 HydrophobicContact CG1-CD2 4.14Å; V51-L79 HydrophobicContact CG2-CB 3.98Å
52E98.7Very high96Very high54 Ų5459 Ų5925%0.25230%0.298SS..EExtended strand (participates in β ladder)trans-91.1117.3157.8-178.6-179.2112.300107.9R34 K73R34-E52 PolarHBondContact N-O 2.65Å; R34-E52 PolarHBondContact O-N 3.3Å; E52-K73 IonicContact OE1-NZ 2.64Å; E52-K73 PolarHBondContact OE1-NZ 2.82Å
53E98.6Very high95.7Very high8 Ų860 Ų604%0.03730%0.303CS..EExtended strand (participates in β ladder)trans-98.3136.9171.3176.2178.5-86.900109.9R31 E32 L33 V55 K73 R74 I76R31-E53 HydrophobicContact CG-CG 4.34Å; R31-E53 IonicContact CZ-OE1 2.76Å; R31-E53 IonicContact NE-OE1 2.65Å; R31-E53 PolarHBondContact NE-OE1 3.1Å; R31-E53 IonicContact NH2-OE1 3.86Å; R31-E53 PolarHBondContact NH2-OE1 3.14Å; E32-E53 CarbonylContact O-C 3.56Å; E32-E53 WeakPolarHBondContact O-CA 3.48Å; L33-E53 HydrophobicContact CD2-CB 3.8Å; L33-E53 HydrophobicContact CD2-CG 3.76Å; E53-V55 HydrophobicContact CG-CG2 4.01Å; E53-K73 VanDerWaalsContact O-CA 3.24Å; E53-K73 WeakPolarHBondContact O-CA 3.48Å; E53-R74 HydrophobicContact CB-CG 4.15Å; E53-R74 PolarHBondContact N-O 2.63Å; E53-R74 PolarHBondContact O-N 3.35Å; E53-R74 IonicContact OE1-NH2 2.83Å; E53-R74 IonicContact OE2-CZ 2.63Å; E53-R74 IonicContact OE2-NE 3.35Å; E53-R74 PolarHBondContact OE2-NE 3.2Å; E53-R74 IonicContact OE2-NH2 3.52Å; E53-R74 PolarHBondContact OE2-NH2 2.75Å; E53-I76 HydrophobicContact CB-CD1 4.31Å
54T98.5Very high95.5Very high10 Ų1057.7 Ų57.76%0.06130%0.297CS..EExtended strand (participates in β ladder)trans-121.5127.5168.8-55.70000109R31 E32 S71 T72 K73R31-T54 CarbonylContact C-O 3.55Å; R31-T54 WeakPolarHBondContact CA-O 3.25Å; E32-T54 PolarHBondContact N-O 2.87Å; E32-T54 PolarHBondContact O-N 2.95Å; T54-S71 WeakPolarHBondContact CG2-OG 3.26Å; T54-T72 CarbonylContact C-O 3.57Å; T54-T72 VanDerWaalsContact CA-O 3.3Å; T54-T72 WeakPolarHBondContact CA-O 3.3Å; T54-K73 HydrophobicContact CG2-CG 4.22Å
55V97.4Very high95.2Very high34 Ų3464.7 Ų64.721%0.20632%0.322CS..EExtended strand (participates in β ladder)trans-120.4125.5173.3-177.10000108.5R31 E53 T57 S71 T72R31-V55 HydrophobicContact CB-CG2 4.34Å; R31-V55 HydrophobicContact CG-CG2 4.07Å; E53-V55 HydrophobicContact CG-CG2 4.01Å; V55-T57 HydrophobicContact CG1-CG2 4.32Å; V55-S71 WeakPolarHBondContact O-CA 3.41Å; V55-T72 PolarHBondContact N-O 2.64Å; V55-T72 PolarHBondContact O-N 2.88Å; V55-T72 PolarHBondContact O-OG1 2.87Å
56T96.3Very high94.9Very high42 Ų4269.7 Ų69.726%0.25834%0.344SS..EExtended strand (participates in β ladder)trans-102.3128.2174.3-59.30000109.9D30 Y69 K70D30-T56 PolarHBondContact O-N 2.87Å; T56-Y69 HydrophobicContact CG2-CD1 4.48Å; T56-K70 CarbonylContact C-O 3.58Å; T56-K70 VanDerWaalsContact CA-O 3.29Å; T56-K70 WeakPolarHBondContact CA-O 3.37Å
57T93.6Very high94.7Very high59 Ų5975 Ų7536%0.36237%0.37SS..EExtended strand (participates in β ladder)trans-119.2147175.855.80000110V55 K70V55-T57 HydrophobicContact CG1-CG2 4.32Å; T57-K70 PolarHBondContact N-O 2.83Å; T57-K70 PolarHBondContact O-N 2.67Å
58I92.3Very high94.3Very high93 Ų9376 Ų7648%0.47738%0.375SS..EExtended strand (participates in β ladder)trans-102.1117.4173.1-55.3172.6000106.5E67 Y69I58-E67 HydrophobicContact CG2-CB 4.13Å; I58-E67 HydrophobicContact CG2-CG 4.18Å; I58-Y69 HydrophobicContact CD1-CE1 3.86Å; I58-Y69 HydrophobicContact CG1-CD1 3.97Å; I58-Y69 HydrophobicContact CG1-CE1 3.77Å
59E90.1Very high94Very high90 Ų9083 Ų8342%0.42140%0.402SS..EExtended strand (participates in β ladder)trans-106142.7171.4-65.9175.8-165.800107.3I68 K70E59-I68 PolarHBondContact N-O 3.02Å; E59-I68 PolarHBondContact O-N 3.36Å; E59-K70 VanDerWaalsContact OE1-CD 3.32Å; E59-K70 WeakPolarHBondContact OE1-CD 3.46Å; E59-K70 IonicContact OE1-NZ 3.44Å; E59-K70 PolarHBondContact OE1-NZ 3.18Å
60I90.6Very high93.8Very high116 Ų11687.5 Ų87.560%0.59542%0.421SS*.EExtended strand (participates in β ladder)trans-102.9125.9174.4-60.2173.6000106.9E62I60-E62 PolarHBondContact O-N 2.77Å
61D88.6Confident93.7Very high52 Ų5286.1 Ų86.128%0.27842%0.419SS..  trans-66.8122.3172.3-170.1-62.7000109.5E63 T64 Y65 E66 I68D61-E63 PolarHBondContact O-N 3.47Å; D61-E63 WeakPolarHBondContact OD1-CA 3.47Å; D61-E63 WeakPolarHBondContact OD1-CB 3.38Å; D61-E63 PolarHBondContact OD1-N 2.88Å; D61-T64 VanDerWaalsContact CB-OG1 3.23Å; D61-T64 WeakPolarHBondContact CB-OG1 3.38Å; D61-T64 VanDerWaalsContact CG-OG1 3.26Å; D61-T64 PolarHBondContact OD1-N 3.01Å; D61-T64 PolarHBondContact OD1-OG1 3.02Å; D61-Y65 WeakPolarHBondContact O-CA 3.27Å; D61-Y65 PolarHBondContact O-N 2.85Å; D61-E66 PolarHBondContact N-O 3.37Å; D61-I68 HydrophobicContact CB-CD1 3.97Å
62E90.4Very high93.6Very high183 Ų18389.5 Ų89.586%0.85544%0.44SS*.THydrogen-bonded Turntrans-70.4-20.7-175.7-63.9-175.4170.700113.2I60I60-E62 PolarHBondContact O-N 2.77Å
63E90.9Very high93.5Very high175 Ų17593.3 Ų93.382%0.81846%0.456SS*.THydrogen-bonded Turntrans-93.6-44.9-179.5-172.5173.9178.800111.4D61D61-E63 PolarHBondContact O-N 3.47Å; D61-E63 WeakPolarHBondContact OD1-CA 3.47Å; D61-E63 WeakPolarHBondContact OD1-CB 3.38Å; D61-E63 PolarHBondContact OD1-N 2.88Å
64T92.6Very high93.5Very high68 Ų6899.8 Ų99.842%0.41748%0.48SS..THydrogen-bonded Turntrans-96.5-13.8-175.370.60000113.9D61 E66D61-T64 VanDerWaalsContact CB-OG1 3.23Å; D61-T64 WeakPolarHBondContact CB-OG1 3.38Å; D61-T64 VanDerWaalsContact CG-OG1 3.26Å; D61-T64 PolarHBondContact OD1-N 3.01Å; D61-T64 PolarHBondContact OD1-OG1 3.02Å; T64-E66 PolarHBondContact O-N 2.82Å; T64-E66 WeakPolarHBondContact OG1-CB 3.29Å; T64-E66 WeakPolarHBondContact OG1-CG 3.09Å; T64-E66 PolarHBondContact OG1-N 3.19Å
65Y89.6Confident93.5Very high189 Ų189105.6 Ų105.674%0.74151%0.511SS*.  trans57.918.9-171.9-61.1-89.8000114.1D61D61-Y65 WeakPolarHBondContact O-CA 3.27Å; D61-Y65 PolarHBondContact O-N 2.85Å
66E93.9Very high93.6Very high130 Ų130105.3 Ų105.361%0.60751%0.508SS*.PPolyproline II helixtrans-82.4145.6177.7-66-177.4160.500111.4D61 T64D61-E66 PolarHBondContact N-O 3.37Å; T64-E66 PolarHBondContact O-N 2.82Å; T64-E66 WeakPolarHBondContact OG1-CB 3.29Å; T64-E66 WeakPolarHBondContact OG1-CG 3.09Å; T64-E66 PolarHBondContact OG1-N 3.19Å
67E92.4Very high93.7Very high114 Ų114108.2 Ų108.253%0.53353%0.527SS..EExtended strand (participates in β ladder)trans-80.2118172.8-68.8-176.1173.900110.7I58 Y69I58-E67 HydrophobicContact CG2-CB 4.13Å; I58-E67 HydrophobicContact CG2-CG 4.18Å; E67-Y69 HydrophobicContact CB-CE2 3.95Å; E67-Y69 PolarHBondContact OE2-OH 2.85Å
68I91.6Very high93.9Very high77 Ų77110.3 Ų110.340%0.39554%0.535SS..EExtended strand (participates in β ladder)trans-102.5116.8176.4-57.4176.2000109E59 D61E59-I68 PolarHBondContact N-O 3.02Å; E59-I68 PolarHBondContact O-N 3.36Å; D61-I68 HydrophobicContact CB-CD1 3.97Å
69Y92.5Very high94.2Very high145 Ų145107.3 Ų107.357%0.56952%0.519SS*.EExtended strand (participates in β ladder)trans-89.6112.9176.1-65.8-98.1000109.9T56 I58 E67T56-Y69 HydrophobicContact CG2-CD1 4.48Å; I58-Y69 HydrophobicContact CD1-CE1 3.86Å; I58-Y69 HydrophobicContact CG1-CD1 3.97Å; I58-Y69 HydrophobicContact CG1-CE1 3.77Å; E67-Y69 HydrophobicContact CB-CE2 3.95Å; E67-Y69 PolarHBondContact OE2-OH 2.85Å
70K94.3Very high94.6Very high97 Ų97109 Ų10942%0.42253%0.526SS..EExtended strand (participates in β ladder)trans-111127.8179.8-172178.3-176.3174.70110.4T56 T57 E59T56-K70 CarbonylContact C-O 3.58Å; T56-K70 VanDerWaalsContact CA-O 3.29Å; T56-K70 WeakPolarHBondContact CA-O 3.37Å; T57-K70 PolarHBondContact N-O 2.83Å; T57-K70 PolarHBondContact O-N 2.67Å; E59-K70 VanDerWaalsContact OE1-CD 3.32Å; E59-K70 WeakPolarHBondContact OE1-CD 3.46Å; E59-K70 IonicContact OE1-NZ 3.44Å; E59-K70 PolarHBondContact OE1-NZ 3.18Å
71S95.6Very high95Very high72 Ų72103.8 Ų103.850%0.50350%0.499SS..EExtended strand (participates in β ladder)trans-111126.4177-162.40000110.2T54 V55T54-S71 WeakPolarHBondContact CG2-OG 3.26Å; V55-S71 WeakPolarHBondContact O-CA 3.41Å
72T96.9Very high95.4Very high72 Ų72108.5 Ų108.544%0.44251%0.513SS..EExtended strand (participates in β ladder)trans-113.1139.3175.958.20000110.1T54 V55T54-T72 CarbonylContact C-O 3.57Å; T54-T72 VanDerWaalsContact CA-O 3.3Å; T54-T72 WeakPolarHBondContact CA-O 3.3Å; V55-T72 PolarHBondContact N-O 2.64Å; V55-T72 PolarHBondContact O-N 2.88Å; V55-T72 PolarHBondContact O-OG1 2.87Å
73K98Very high95.8Very high133 Ų133100.2 Ų100.258%0.57848%0.476SS*.EExtended strand (participates in β ladder)trans-121.6140.8179-66.8-167.5171.3-1560111.6E52 E53 T54E52-K73 IonicContact OE1-NZ 2.64Å; E52-K73 PolarHBondContact OE1-NZ 2.82Å; E53-K73 VanDerWaalsContact O-CA 3.24Å; E53-K73 WeakPolarHBondContact O-CA 3.48Å; T54-K73 HydrophobicContact CG2-CG 4.22Å
74R97.9Very high96.1Very high144 Ų14496.4 Ų96.454%0.54346%0.462SS..EExtended strand (participates in β ladder)trans-145.8153.3169.765.1176.2176.4176.5-0.9111.8E53 I76E53-R74 HydrophobicContact CB-CG 4.15Å; E53-R74 PolarHBondContact N-O 2.63Å; E53-R74 PolarHBondContact O-N 3.35Å; E53-R74 IonicContact OE1-NH2 2.83Å; E53-R74 IonicContact OE2-CZ 2.63Å; E53-R74 IonicContact OE2-NE 3.35Å; E53-R74 PolarHBondContact OE2-NE 3.2Å; E53-R74 IonicContact OE2-NH2 3.52Å; E53-R74 PolarHBondContact OE2-NH2 2.75Å; R74-I76 HydrophobicContact CG-CD1 4.48Å; R74-I76 HydrophobicContact CG-CG1 4.31Å
75N98.5Very high96.3Very high132 Ų13294.1 Ų94.171%0.70645%0.452SS*.EExtended strand (participates in β ladder)trans-99.2135.7174.2-64.7-32.2000110.2V51V51-N75 CarbonylContact O-C 3.58Å; V51-N75 VanDerWaalsContact O-CA 3.27Å; V51-N75 WeakPolarHBondContact O-CA 3.43Å
76I98.6Very high96.7Very high28 Ų2886.3 Ų86.314%0.14442%0.423CS..EExtended strand (participates in β ladder)trans-129117.1-179.1-52.4172.7000107.5V51 E53 R74 M78 L79V51-I76 HydrophobicContact CB-CB 4.29Å; V51-I76 PolarHBondContact N-O 2.74Å; V51-I76 PolarHBondContact O-N 3.36Å; E53-I76 HydrophobicContact CB-CD1 4.31Å; R74-I76 HydrophobicContact CG-CD1 4.48Å; R74-I76 HydrophobicContact CG-CG1 4.31Å; I76-M78 VanDerWaalsContact C-N 3.32Å; I76-M78 WeakPolarHBondContact CG2-O 3.24Å; I76-M78 PolarHBondContact O-N 2.67Å; I76-L79 HydrophobicContact CD1-CD1 4.36Å; I76-L79 HydrophobicContact CD1-CD2 4.35Å; I76-L79 HydrophobicContact CG2-CB 4.22Å
77P98.3Very high96.9Very high103 Ų10384.7 Ų84.767%0.66942%0.422SS*.EExtended strand (participates in β ladder)trans-58.8-41.5-176.9-27.235.1000113.6G49 D50G49-P77 CarbonylContact C-O 3.58Å; G49-P77 WeakPolarHBondContact CA-O 3.38Å; D50-P77 PolarHBondContact N-O 3.33Å
78M98.3Very high97.1Very high104 Ų10483.5 Ų83.551%0.51242%0.419SS..EExtended strand (participates in β ladder)trans-145134.8178.7-76-67.2-72.700110I47 L48 I76I47-M78 HydrophobicContact CG2-CE 3.38Å; L48-M78 CarbonylContact O-C 3.52Å; L48-M78 WeakPolarHBondContact O-CA 3.34Å; I76-M78 VanDerWaalsContact C-N 3.32Å; I76-M78 WeakPolarHBondContact CG2-O 3.24Å; I76-M78 PolarHBondContact O-N 2.67Å
79L98.4Very high97.4Very high29 Ų2981.3 Ų81.315%0.15241%0.409CS..EExtended strand (participates in β ladder)trans-138.1126.9-177.3-177.965.6000110.7L33 L48 V51 I76 V81L33-L79 HydrophobicContact CD1-CD2 3.87Å; L33-L79 HydrophobicContact CD2-CD2 3.92Å; L48-L79 PolarHBondContact N-O 2.79Å; L48-L79 PolarHBondContact O-N 2.86Å; V51-L79 HydrophobicContact CG1-CD2 4.14Å; V51-L79 HydrophobicContact CG2-CB 3.98Å; I76-L79 HydrophobicContact CD1-CD1 4.36Å; I76-L79 HydrophobicContact CD1-CD2 4.35Å; I76-L79 HydrophobicContact CG2-CB 4.22Å; L79-V81 HydrophobicContact CD2-CG2 3.87Å; L79-V81 HydrophobicContact CG-CG2 3.96Å
80F98.4Very high97.5Very high127 Ų12776 Ų7656%0.55740%0.395SS*.EExtended strand (participates in β ladder)trans-85.3127.8162.2173.2-97.7000109.3N45 M46 I47 R82N45-F80 HydrophobicContact CB-CE2 4.01Å; N45-F80 HydrophobicContact CB-CZ 4.08Å; M46-F80 WeakPolarHBondContact O-CA 3.32Å; I47-F80 HydrophobicContact CD1-CB 4.15Å; I47-F80 HydrophobicContact CD1-CD2 3.67Å; I47-F80 HydrophobicContact CD1-CG 4.4Å; F80-R82 HydrophobicContact CE1-CB 4.33Å
81V98.4Very high97.4Very high5 Ų573.5 Ų73.53%0.0339%0.389CS..EExtended strand (participates in β ladder)trans-113.5128.4178.4-178.10000108.4M27 L33 N45 M46 L48 L79 V86M27-V81 HydrophobicContact CE-CG1 3.51Å; M27-V81 HydrophobicContact SD-CG1 3.7Å; L33-V81 HydrophobicContact CD1-CG1 4.31Å; L33-V81 HydrophobicContact CD1-CG2 3.6Å; N45-V81 CarbonylContact C-O 3.49Å; N45-V81 VanDerWaalsContact CA-O 3.25Å; N45-V81 WeakPolarHBondContact CA-O 3.47Å; M46-V81 HydrophobicContact CB-CB 4.26Å; M46-V81 HydrophobicContact CE-CG1 4.49Å; M46-V81 PolarHBondContact N-O 3.24Å; M46-V81 PolarHBondContact O-N 2.87Å; L48-V81 HydrophobicContact CD1-CG2 3.89Å; L48-V81 HydrophobicContact CG-CG2 4.19Å; L79-V81 HydrophobicContact CD2-CG2 3.87Å; L79-V81 HydrophobicContact CG-CG2 3.96Å; V81-V86 HydrophobicContact CG1-CG2 4.13Å
82R98.2Very high97Very high152 Ų15271.8 Ų71.857%0.57438%0.376SS*.  trans-85.2133.7174.2-174.2178.717585.77.4110.6N45 F80 D84 G85N45-R82 WeakPolarHBondContact OD1-CA 3.24Å; F80-R82 HydrophobicContact CE1-CB 4.33Å; R82-D84 HydrophobicContact CG-CB 4.48Å; R82-D84 IonicContact CZ-OD2 2.77Å; R82-D84 IonicContact NE-OD2 3.09Å; R82-D84 PolarHBondContact NE-OD2 3.03Å; R82-D84 IonicContact NH2-OD2 2.67Å; R82-D84 PolarHBondContact NH2-OD2 2.86Å; R82-D84 PolarHBondContact O-N 3.37Å; R82-G85 PolarHBondContact O-N 2.71Å
83G97.9Very high96.3Very high9 Ų976.4 Ų76.49%0.09340%0.397CS..G310 helixtrans-61.4-33.4-175.900000115.5H43 L44 N45 G85 V86H43-G83 VanDerWaalsContact O-CA 3.29Å; H43-G83 WeakPolarHBondContact O-CA 3.15Å; L44-G83 VanDerWaalsContact O-CA 3.28Å; L44-G83 WeakPolarHBondContact O-CA 3.45Å; N45-G83 PolarHBondContact OD1-N 2.85Å; G83-G85 PolarHBondContact O-N 2.76Å; G83-V86 WeakPolarHBondContact O-CB 3.17Å; G83-V86 PolarHBondContact O-N 2.89Å
84D98.1Very high95.2Very high95 Ų9576 Ų7651%0.50839%0.392SS..G310 helixtrans-56.4-29.1180-63.2-16.9000113.6R28 R82R28-D84 VanDerWaalsContact CZ-O 3.3Å; R28-D84 PolarHBondContact NE-O 2.88Å; R28-D84 VanDerWaalsContact NE-O 3.14Å; R28-D84 PolarHBondContact NH2-O 2.93Å; R28-D84 VanDerWaalsContact NH2-O 3.1Å; R82-D84 HydrophobicContact CG-CB 4.48Å; R82-D84 IonicContact CZ-OD2 2.77Å; R82-D84 IonicContact NE-OD2 3.09Å; R82-D84 PolarHBondContact NE-OD2 3.03Å; R82-D84 IonicContact NH2-OD2 2.67Å; R82-D84 PolarHBondContact NH2-OD2 2.86Å; R82-D84 PolarHBondContact O-N 3.37Å
85G97.1Very high93.4Very high20 Ų2075.9 Ų75.921%0.20641%0.407CS..G310 helixtrans-88.6-8.6-179.500000114.3M27 R28 R82 G83M27-G85 CarbonylContact C-O 3.5Å; M27-G85 VanDerWaalsContact CA-O 3.23Å; M27-G85 WeakPolarHBondContact CA-O 3.46Å; M27-G85 VanDerWaalsContact CE-C 3.47Å; R28-G85 PolarHBondContact N-O 2.9Å; R82-G85 PolarHBondContact O-N 2.71Å; G83-G85 PolarHBondContact O-N 2.76Å
86V97.9Very high91.1Very high24 Ų2476.5 Ų76.515%0.14545%0.445CS..EExtended strand (participates in β ladder)trans-78.3132.2-178.3179.30000109.2V25 M27 M46 V81 G83 V89V25-V86 HydrophobicContact CG1-CG1 4Å; V25-V86 HydrophobicContact CG1-CG2 4.23Å; M27-V86 HydrophobicContact CE-CG2 4.17Å; M27-V86 HydrophobicContact SD-CB 4.36Å; M27-V86 HydrophobicContact SD-CG2 3.73Å; M46-V86 HydrophobicContact CE-CB 4.49Å; M46-V86 HydrophobicContact CE-CG1 4.19Å; M46-V86 HydrophobicContact CE-CG2 3.5Å; V81-V86 HydrophobicContact CG1-CG2 4.13Å; G83-V86 WeakPolarHBondContact O-CB 3.17Å; G83-V86 PolarHBondContact O-N 2.89Å; V86-V89 HydrophobicContact CG1-CG2 3.59Å
87V97.9Very high90.8Very high97 Ų9779 Ų7959%0.58846%0.46SS*.EExtended strand (participates in β ladder)trans-109.3-41.7176.4179.10000110.4K26 R28K26-V87 PolarHBondContact O-N 2.83Å; R28-V87 HydrophobicContact CG-CG2 3.71Å
88L97.1Very high90.4Very high88 Ų8877.7 Ų77.746%0.46145%0.449SS..EExtended strand (participates in β ladder)trans-146.6141.9-179.6175.7149.5000110Y24 V25 K26 A90Y24-L88 HydrophobicContact CD1-CD2 3.9Å; Y24-L88 HydrophobicContact CE1-CD2 3.89Å; V25-L88 CarbonylContact C-O 3.48Å; V25-L88 WeakPolarHBondContact CA-O 3.23Å; K26-L88 HydrophobicContact CB-CB 4.15Å; K26-L88 PolarHBondContact N-O 3.22Å; K26-L88 PolarHBondContact O-N 3.44Å; L88-A90 HydrophobicContact CD2-CB 4.06Å
89V97.1Very high89.9Confident31 Ų3176.2 Ų76.219%0.18845%0.445CS..EExtended strand (participates in β ladder)trans-122.4126.2168.6-173.90000108.1I15 I23 Y24 V25 M46 V86I15-V89 HydrophobicContact CD1-CB 3.97Å; I15-V89 HydrophobicContact CD1-CG1 3.58Å; I23-V89 HydrophobicContact CD1-CG1 3.97Å; Y24-V89 WeakPolarHBondContact O-CA 3.42Å; V25-V89 HydrophobicContact CG1-CG2 4.4Å; V25-V89 HydrophobicContact CG2-CG1 4.39Å; M46-V89 HydrophobicContact CE-CG2 4.05Å; V86-V89 HydrophobicContact CG1-CG2 3.59Å
90A95.8Very high89.4Confident33 Ų3379 Ų7927%0.27346%0.463SS..EExtended strand (participates in β ladder)trans-112.9120.4174.300000109.9Y24 L88Y24-A90 HydrophobicContact CD1-CB 4.09Å; Y24-A90 PolarHBondContact N-O 2.86Å; Y24-A90 PolarHBondContact O-N 3.4Å; L88-A90 HydrophobicContact CD2-CB 4.06Å
91P90.5Very high88.8Confident46 Ų4676 Ų7630%0.29946%0.457SS..  trans-67.3165.4172.630.9-35000110.7S18S18-P91 VanDerWaalsContact OG-CB 3.27Å; S18-P91 WeakPolarHBondContact OG-CB 3.29Å
92P88Confident88.2Confident35 Ų3580.7 Ų80.723%0.22749%0.485CS..  trans-59.7150.9174.226.8-35.8000111.4E21 R94E21-P92 HydrophobicContact CB-CG 3.86Å; E21-P92 VanDerWaalsContact CD-CG 3.43Å; E21-P92 HydrophobicContact CG-CG 4.26Å; E21-P92 WeakPolarHBondContact OE2-CG 3.43Å; P92-R94 PolarHBondContact O-N 3.35Å
93L81.7Confident87.5Confident169 Ų16975.6 Ų75.689%0.88548%0.479SS*.  trans-65.2106.5171-69.1170.7000108.5V95L93-V95 PolarHBondContact O-N 3.44Å
94R74.6Confident86.7Confident125 Ų12580.8 Ų80.847%0.47251%0.509SS..  trans-78.499.6170.7-64.8-174.9177.29311.7107.2L17 S18 E21 P92 G96L17-R94 PolarHBondContact O-NH2 2.83Å; L17-R94 VanDerWaalsContact O-NH2 3.15Å; S18-R94 PolarHBondContact OG-NH2 2.97Å; E21-R94 IonicContact OE2-CZ 3.6Å; E21-R94 IonicContact OE2-NH2 3.17Å; E21-R94 PolarHBondContact OE2-NH2 3.36Å; P92-R94 PolarHBondContact O-N 3.35Å; R94-G96 PolarHBondContact O-N 2.89Å
95V60.2Low85.8Confident141 Ų14179.6 Ų79.686%0.85551%0.509SS*.  trans-72.3117.2170.1-147.20000106.2L93L93-V95 PolarHBondContact O-N 3.44Å
96G51.3Low84.7Confident146 Ų14685 Ų85100%1.50554%0.536SS*.  trans-710179.400000113.4R94R94-G96 PolarHBondContact O-N 2.89Å

Retrieved 96 of 96 residues in 72.7 ms (Link to these results)