A0A096LNI3_HUMAN Loading...

Rubicon autophagy regulator

AlphaFold DB , UniProt , Accession A0A096LNI3, Species HUMAN (Homo sapiens, Human), Gene RUBCN, Length 24 aa.

						>A0A096LNI3_HUMAN|A0A096LNI3|RUBCN
MLQCLEAVEQNNPRLLAQIDASMF
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	64.6	Low	78.3	Confident	209 Å²	209	117.9 Å²	117.9	100%	1.03	61%	0.614	S	S	*	*				0	-50.5	0	-155	160.2	179.6	0	0	111.6	Q3 C4 L5	M1-Q3 PolarHBondContact O-N 2.78Å; M1-Q3 VanDerWaalsContact C-N 3.34Å; M1-C4 WeakPolarHBondContact O-CB 3.34Å; M1-C4 PolarHBondContact O-N 3.03Å; M1-C4 VanDerWaalsContact O-N 3.14Å; M1-L5 PolarHBondContact O-N 3.17Å
2	L	69.4	Low	78.4	Confident	141 Å²	141	116.8 Å²	116.8	74%	0.738	61%	0.61	S	S	*	*	H	α-helix	trans	-54.2	-43.5	175	-102.8	104.7	0	0	0	114.1	C4 L5 E6	L2-C4 PolarHBondContact O-N 3.05Å; L2-L5 WeakPolarHBondContact O-CA 3.2Å; L2-L5 WeakPolarHBondContact O-CB 3.48Å; L2-L5 PolarHBondContact O-N 3.37Å; L2-E6 PolarHBondContact O-N 3.06Å
3	Q	71.8	Confident	78.2	Confident	158 Å²	158	114.5 Å²	114.5	74%	0.738	61%	0.606	S	S	*	*	H	α-helix	trans	-62.9	-29.1	179.7	-66	-178.9	-38.2	0	0	113.7	M1 L5 A7	M1-Q3 PolarHBondContact O-N 2.78Å; M1-Q3 VanDerWaalsContact C-N 3.34Å; Q3-L5 VanDerWaalsContact C-N 3.34Å; Q3-A7 VanDerWaalsContact O-CB 3.31Å; Q3-A7 WeakPolarHBondContact O-CB 3.31Å; Q3-A7 PolarHBondContact O-N 3.46Å
4	C	81.6	Confident	78.5	Confident	85 Å²	85	120.6 Å²	120.6	57%	0.574	62%	0.617	S	S	*	*	H	α-helix	trans	-71.6	-36.1	175.2	-56.8	0	0	0	0	110.5	M1 L2 V8	M1-C4 WeakPolarHBondContact O-CB 3.34Å; M1-C4 PolarHBondContact O-N 3.03Å; M1-C4 VanDerWaalsContact O-N 3.14Å; L2-C4 PolarHBondContact O-N 3.05Å; C4-V8 WeakPolarHBondContact O-CB 3.45Å; C4-V8 WeakPolarHBondContact O-CG2 3.29Å; C4-V8 PolarHBondContact O-N 3.14Å
5	L	78.4	Confident	78.7	Confident	103 Å²	103	118 Å²	118	54%	0.539	60%	0.604	S	S	.	*	H	α-helix	trans	-68.8	-46	178.6	-147	78.5	0	0	0	110.8	M1 L2 Q3 A7 V8 E9 L16	M1-L5 PolarHBondContact O-N 3.17Å; L2-L5 WeakPolarHBondContact O-CA 3.2Å; L2-L5 WeakPolarHBondContact O-CB 3.48Å; L2-L5 PolarHBondContact O-N 3.37Å; Q3-L5 VanDerWaalsContact C-N 3.34Å; L5-A7 PolarHBondContact O-N 3.4Å; L5-V8 PolarHBondContact O-N 3.34Å; L5-E9 PolarHBondContact O-N 3.5Å; L5-L16 HydrophobicContact CG-CD1 4.12Å; L5-L16 HydrophobicContact CG-CD2 4.16Å; L5-L16 HydrophobicContact CD1-CD2 3.83Å
6	E	80.2	Confident	78.6	Confident	111 Å²	111	113.3 Å²	113.3	52%	0.519	58%	0.58	S	S	.	*	H	α-helix	trans	-60.6	-43.3	174.5	-74.4	175	143.6	0	0	111.7	L2 V8 E9 Q10	L2-E6 PolarHBondContact O-N 3.06Å; E6-V8 VanDerWaalsContact C-N 3.28Å; E6-V8 PolarHBondContact O-N 3.25Å; E6-E9 PolarHBondContact O-N 3.01Å; E6-Q10 WeakPolarHBondContact O-CB 3.48Å; E6-Q10 WeakPolarHBondContact O-CG 3.2Å; E6-Q10 PolarHBondContact O-N 2.96Å
7	A	83.8	Confident	78.5	Confident	47 Å²	47	110.2 Å²	110.2	39%	0.388	58%	0.575	S	S	.	*	H	α-helix	trans	-62.1	-37.5	176.6	0	0	0	0	0	112	Q3 L5 N11	Q3-A7 VanDerWaalsContact O-CB 3.31Å; Q3-A7 WeakPolarHBondContact O-CB 3.31Å; Q3-A7 PolarHBondContact O-N 3.46Å; L5-A7 PolarHBondContact O-N 3.4Å; A7-N11 WeakPolarHBondContact O-CB 3.43Å; A7-N11 PolarHBondContact O-N 3Å; A7-N11 PolarHBondContact O-ND2 2.97Å
8	V	83.1	Confident	78.4	Confident	54 Å²	54	110.9 Å²	110.9	33%	0.327	58%	0.575	S	S	.	*	H	α-helix	trans	-70.2	-40.1	176.5	169.5	0	0	0	0	111.2	C4 L5 E6 N11 N12 L15 L16	C4-V8 WeakPolarHBondContact O-CB 3.45Å; C4-V8 WeakPolarHBondContact O-CG2 3.29Å; C4-V8 PolarHBondContact O-N 3.14Å; L5-V8 PolarHBondContact O-N 3.34Å; E6-V8 VanDerWaalsContact C-N 3.28Å; E6-V8 PolarHBondContact O-N 3.25Å; V8-N11 PolarHBondContact O-N 3.27Å; V8-N12 CarbonylContact O-C 3.41Å; V8-N12 WeakPolarHBondContact O-CA 3.34Å; V8-N12 PolarHBondContact O-N 2.82Å; V8-L15 HydrophobicContact CG1-CD2 3.82Å; V8-L16 HydrophobicContact CG1-CD1 4.47Å; V8-L16 HydrophobicContact CG1-CD2 4.19Å; V8-L16 HydrophobicContact CG1-CG 4.07Å
9	E	82.6	Confident	78.5	Confident	104 Å²	104	109.2 Å²	109.2	49%	0.486	57%	0.566	S	S	.	*	H	α-helix	trans	-63.2	-42	175.6	-163.9	170.9	-165.9	0	0	112	L5 E6 N12 P13 L16	L5-E9 PolarHBondContact O-N 3.5Å; E6-E9 PolarHBondContact O-N 3.01Å; E9-N12 CarbonylContact O-C 3.59Å; E9-P13 VanDerWaalsContact O-N 3.08Å; E9-P13 WeakPolarHBondContact O-CD 3.13Å; E9-P13 WeakPolarHBondContact O-CB 3.28Å; E9-P13 WeakPolarHBondContact O-CA 3.39Å; E9-P13 VanDerWaalsContact O-CD 3.28Å; E9-L16 HydrophobicContact CB-CD1 3.65Å; E9-L16 HydrophobicContact CG-CD1 4.11Å
10	Q	81.2	Confident	78.2	Confident	161 Å²	161	109.6 Å²	109.6	75%	0.752	57%	0.569	S	S	*	*	H	α-helix	trans	-70.5	-36.8	178.8	-67.9	-70.4	-40.7	0	0	112.4	E6	E6-Q10 WeakPolarHBondContact O-CB 3.48Å; E6-Q10 WeakPolarHBondContact O-CG 3.2Å; E6-Q10 PolarHBondContact O-N 2.96Å
11	N	84.8	Confident	78	Confident	124 Å²	124	107.9 Å²	107.9	66%	0.663	57%	0.571	S	S	*	*	H	α-helix	trans	-81.7	-32.8	179.2	-78.6	-70.9	0	0	0	113	A7 V8	A7-N11 WeakPolarHBondContact O-CB 3.43Å; A7-N11 PolarHBondContact O-N 3Å; A7-N11 PolarHBondContact O-ND2 2.97Å; V8-N11 PolarHBondContact O-N 3.27Å
12	N	79.6	Confident	78.5	Confident	105 Å²	105	102.2 Å²	102.2	56%	0.561	55%	0.552	S	S	*	*			trans	-150.2	78.1	-177.1	-81.2	-61.3	0	0	0	110.8	V8 E9 R14 L15	V8-N12 CarbonylContact O-C 3.41Å; V8-N12 WeakPolarHBondContact O-CA 3.34Å; V8-N12 PolarHBondContact O-N 2.82Å; E9-N12 CarbonylContact O-C 3.59Å; N12-R14 PolarHBondContact O-N 3.45Å; N12-L15 HydrophobicContact CB-CB 4.08Å; N12-L15 WeakPolarHBondContact O-CB 3.33Å; N12-L15 PolarHBondContact O-N 2.91Å
13	P	75.8	Confident	78.4	Confident	87 Å²	87	102.9 Å²	102.9	57%	0.565	55%	0.553	S	S	*	*	H	α-helix	trans	-61.9	-17.7	-172.7	19.4	-30.7	0	0	0	114.2	E9	E9-P13 VanDerWaalsContact O-N 3.08Å; E9-P13 WeakPolarHBondContact O-CD 3.13Å; E9-P13 WeakPolarHBondContact O-CB 3.28Å; E9-P13 WeakPolarHBondContact O-CA 3.39Å; E9-P13 VanDerWaalsContact O-CD 3.28Å
14	R	81.8	Confident	77.7	Confident	199 Å²	199	106.9 Å²	106.9	75%	0.751	57%	0.569	S	S	*	*	H	α-helix	trans	-86.8	-16.1	178	-61.9	-177.4	-175	-175.1	0.9	113.7	N12 Q18	N12-R14 PolarHBondContact O-N 3.45Å; R14-Q18 WeakPolarHBondContact O-CB 3.41Å; R14-Q18 VanDerWaalsContact O-CG 3.22Å; R14-Q18 WeakPolarHBondContact O-CG 3.39Å; R14-Q18 PolarHBondContact O-N 2.97Å
15	L	81.4	Confident	77.5	Confident	82 Å²	82	108 Å²	108	43%	0.429	57%	0.569	S	S	.	*	H	α-helix	trans	-70.7	-47.2	-174.7	-170.8	72.5	0	0	0	111.1	V8 N12 A17 Q18 I19	V8-L15 HydrophobicContact CG1-CD2 3.82Å; N12-L15 HydrophobicContact CB-CB 4.08Å; N12-L15 WeakPolarHBondContact O-CB 3.33Å; N12-L15 PolarHBondContact O-N 2.91Å; L15-A17 VanDerWaalsContact C-N 3.34Å; L15-A17 PolarHBondContact O-N 2.89Å; L15-Q18 PolarHBondContact O-N 3.26Å; L15-I19 HydrophobicContact CG-CD1 4.28Å; L15-I19 VanDerWaalsContact O-CG1 3.29Å; L15-I19 WeakPolarHBondContact O-CG1 3.49Å; L15-I19 PolarHBondContact O-N 3.01Å
16	L	77.9	Confident	77.4	Confident	43 Å²	43	108.3 Å²	108.3	23%	0.225	57%	0.57	C	S	.	*	H	α-helix	trans	-64	-41.7	177.1	-67.4	173.3	0	0	0	111.2	L5 V8 E9 Q18 I19 D20	L5-L16 HydrophobicContact CG-CD1 4.12Å; L5-L16 HydrophobicContact CG-CD2 4.16Å; L5-L16 HydrophobicContact CD1-CD2 3.83Å; V8-L16 HydrophobicContact CG1-CD1 4.47Å; V8-L16 HydrophobicContact CG1-CD2 4.19Å; V8-L16 HydrophobicContact CG1-CG 4.07Å; E9-L16 HydrophobicContact CB-CD1 3.65Å; E9-L16 HydrophobicContact CG-CD1 4.11Å; L16-Q18 VanDerWaalsContact C-N 3.33Å; L16-Q18 PolarHBondContact O-N 3.42Å; L16-I19 PolarHBondContact O-N 2.87Å; L16-D20 PolarHBondContact O-N 3.44Å
17	A	76.8	Confident	77.3	Confident	60 Å²	60	108.1 Å²	108.1	50%	0.496	57%	0.573	S	S	.	*	H	α-helix	trans	-63.2	-35.4	175.8	0	0	0	0	0	113.3	L15 A21	L15-A17 VanDerWaalsContact C-N 3.34Å; L15-A17 PolarHBondContact O-N 2.89Å; A17-A21 WeakPolarHBondContact O-CB 3.22Å; A17-A21 VanDerWaalsContact O-N 3.11Å; A17-A21 PolarHBondContact O-N 3.42Å
18	Q	76.4	Confident	76.9	Confident	123 Å²	123	111.7 Å²	111.7	58%	0.575	58%	0.584	S	S	*	*	H	α-helix	trans	-70.4	-40	174.9	-78	174.3	30	0	0	112.1	R14 L15 L16 D20 A21 S22	R14-Q18 WeakPolarHBondContact O-CB 3.41Å; R14-Q18 VanDerWaalsContact O-CG 3.22Å; R14-Q18 WeakPolarHBondContact O-CG 3.39Å; R14-Q18 PolarHBondContact O-N 2.97Å; L15-Q18 PolarHBondContact O-N 3.26Å; L16-Q18 VanDerWaalsContact C-N 3.33Å; L16-Q18 PolarHBondContact O-N 3.42Å; Q18-D20 VanDerWaalsContact C-N 3.31Å; Q18-D20 PolarHBondContact O-N 3.14Å; Q18-A21 PolarHBondContact O-N 3.32Å; Q18-S22 PolarHBondContact O-N 3.46Å; Q18-S22 PolarHBondContact O-OG 3.15Å
19	I	80.1	Confident	76.5	Confident	79 Å²	79	115.3 Å²	115.3	41%	0.405	60%	0.6	S	S	.	*	H	α-helix	trans	-59.8	-46.4	175.2	-68.6	164.7	0	0	0	109.7	L15 L16 A21 S22 M23	L15-I19 HydrophobicContact CG-CD1 4.28Å; L15-I19 VanDerWaalsContact O-CG1 3.29Å; L15-I19 WeakPolarHBondContact O-CG1 3.49Å; L15-I19 PolarHBondContact O-N 3.01Å; L16-I19 PolarHBondContact O-N 2.87Å; I19-A21 VanDerWaalsContact C-N 3.33Å; I19-A21 PolarHBondContact O-N 3.11Å; I19-S22 PolarHBondContact O-OG 3.27Å; I19-S22 VanDerWaalsContact O-N 3.14Å; I19-S22 PolarHBondContact O-N 3.49Å; I19-S22 WeakPolarHBondContact CA-OG 3.48Å; I19-M23 HydrophobicContact CG2-CE 4.43Å; I19-M23 HydrophobicContact CG2-CG 4.47Å; I19-M23 VanDerWaalsContact O-CG 3.28Å; I19-M23 WeakPolarHBondContact O-CG 3.28Å; I19-M23 PolarHBondContact O-N 2.94Å; I19-M23 VanDerWaalsContact O-N 3.15Å
20	D	72.4	Confident	76.1	Confident	116 Å²	116	116.1 Å²	116.1	62%	0.62	61%	0.608	S	S	*	*	H	α-helix	trans	-61.1	-40.9	179	-134.8	21.5	0	0	0	111.9	L16 Q18 S22 M23	L16-D20 PolarHBondContact O-N 3.44Å; Q18-D20 VanDerWaalsContact C-N 3.31Å; Q18-D20 PolarHBondContact O-N 3.14Å; D20-S22 VanDerWaalsContact C-N 3.33Å; D20-S22 PolarHBondContact O-N 2.99Å; D20-M23 PolarHBondContact O-N 3.05Å
21	A	74.2	Confident	75.7	Confident	74 Å²	74	112.9 Å²	112.9	61%	0.612	60%	0.597	S	S	*	*	H	α-helix	trans	-70.1	-25.3	176.9	0	0	0	0	0	114	A17 Q18 I19	A17-A21 WeakPolarHBondContact O-CB 3.22Å; A17-A21 VanDerWaalsContact O-N 3.11Å; A17-A21 PolarHBondContact O-N 3.42Å; Q18-A21 PolarHBondContact O-N 3.32Å; I19-A21 VanDerWaalsContact C-N 3.33Å; I19-A21 PolarHBondContact O-N 3.11Å
22	S	74.8	Confident	75	Confident	91 Å²	91	112 Å²	112	64%	0.636	59%	0.592	S	S	*	*	H	α-helix	trans	-91.6	-6.2	178.9	54.3	0	0	0	0	114.6	Q18 I19 D20 F24	Q18-S22 PolarHBondContact O-N 3.46Å; Q18-S22 PolarHBondContact O-OG 3.15Å; I19-S22 PolarHBondContact O-OG 3.27Å; I19-S22 VanDerWaalsContact O-N 3.14Å; I19-S22 PolarHBondContact O-N 3.49Å; I19-S22 WeakPolarHBondContact CA-OG 3.48Å; D20-S22 VanDerWaalsContact C-N 3.33Å; D20-S22 PolarHBondContact O-N 2.99Å; S22-F24 VanDerWaalsContact C-N 3.29Å
23	M	68.3	Low	74.6	Confident	154 Å²	154	112.6 Å²	112.6	76%	0.759	60%	0.595	S	S	*	*			trans	-85.9	-1.5	173.9	-72.4	-88.3	-143.5	0	0	112.8	I19 D20	I19-M23 HydrophobicContact CG2-CE 4.43Å; I19-M23 HydrophobicContact CG2-CG 4.47Å; I19-M23 VanDerWaalsContact O-CG 3.28Å; I19-M23 WeakPolarHBondContact O-CG 3.28Å; I19-M23 PolarHBondContact O-N 2.94Å; I19-M23 VanDerWaalsContact O-N 3.15Å; D20-M23 PolarHBondContact O-N 3.05Å
24	F	55.8	Low	74.5	Confident	243 Å²	243	114.9 Å²	114.9	100%	1.066	60%	0.598	S	S	*	*			trans	-98.9	0	173.8	-84.3	-84.3	0	0	0	112.5	S22	S22-F24 VanDerWaalsContact C-N 3.29Å

Retrieved 24 of 24 residues in 23.3 ms (Link to these results)

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