A0A096LP50_HUMAN Loading...

Protocadherin beta 9

AlphaFold DB , UniProt , Accession A0A096LP50, Species HUMAN (Homo sapiens, Human), Gene PCDHB9, Length 73 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M44.3Very low76.6Confident246 Ų246111 Ų111100%1.21261%0.613SS**  0121.10-71.4-68.6-175.200106.4
2T68.3Low77.5Confident96 Ų96106.3 Ų106.359%0.58960%0.599SS**  trans-74.1151.3172.948.80000109.1G4 L6T2-G4 WeakPolarHBondContact CB-O 3Å; T2-G4 PolarHBondContact O-N 3.35Å; T2-G4 PolarHBondContact OG1-O 2.99Å; T2-L6 HydrophobicContact CG2-CD1 4.09Å; T2-L6 HydrophobicContact CG2-CG 4.35Å
3E70.3Confident78.6Confident218 Ų218104 Ų104100%1.01958%0.581SS**SBendtrans-73.4-3.1178.2-68.7-157127.300113.5
4G76.8Confident79.5Confident45 Ų45101.6 Ų101.646%0.46456%0.559SS.*SBendtrans-162.1173.1176.500000112.9T2T2-G4 WeakPolarHBondContact CB-O 3Å; T2-G4 PolarHBondContact O-N 3.35Å; T2-G4 PolarHBondContact OG1-O 2.99Å
5A79.2Confident80.4Confident105 Ų105101.7 Ų101.787%0.86856%0.559SS**  trans-64.7138.8173.100000110.4
6L82.8Confident81.1Confident82 Ų82100.3 Ų100.343%0.42955%0.549SS..  trans-96.7127.9172.3-64.3176.1000108.1T2 Y14 V38T2-L6 HydrophobicContact CG2-CD1 4.09Å; T2-L6 HydrophobicContact CG2-CG 4.35Å; L6-Y14 HydrophobicContact CD2-CE2 4.11Å; L6-V38 HydrophobicContact CB-CG1 4.17Å
7D80.9Confident81.9Confident61 Ų6199 Ų9933%0.32655%0.545SS..  trans-125.7117.7176.9171.628.2000108E9 S10 K11D7-E9 VanDerWaalsContact C-N 3.34Å; D7-E9 PolarHBondContact OD1-N 2.89Å; D7-S10 PolarHBondContact O-N 2.98Å; D7-S10 VanDerWaalsContact OD2-CB 3.22Å; D7-S10 WeakPolarHBondContact OD2-CB 3.45Å; D7-S10 PolarHBondContact OD2-N 3.24Å; D7-S10 PolarHBondContact OD2-OG 2.82Å; D7-K11 PolarHBondContact O-N 3.22Å
8R84.6Confident82.6Confident84 Ų8497.8 Ų97.832%0.31754%0.537SS..THydrogen-bonded Turntrans-67.9-39.2-174.2-169.7-163.170164-12.1110.5S10 K11 A12 V38 D40R8-S10 PolarHBondContact O-N 2.94Å; R8-K11 CarbonylContact O-C 3.59Å; R8-K11 VanDerWaalsContact O-C 3.28Å; R8-K11 PolarHBondContact O-N 3.37Å; R8-K11 VanDerWaalsContact O-N 3.17Å; R8-A12 HydrophobicContact CG-CB 4Å; R8-A12 PolarHBondContact O-N 2.85Å; R8-V38 HydrophobicContact CB-CB 4.41Å; R8-V38 HydrophobicContact CB-CG1 4.01Å; R8-V38 HydrophobicContact CG-CB 4.39Å; R8-V38 HydrophobicContact CG-CG1 4.49Å; R8-D40 IonicContact CZ-OD1 3.12Å; R8-D40 IonicContact CZ-OD2 3.11Å; R8-D40 IonicContact NE-OD1 3.51Å; R8-D40 VanDerWaalsContact NH1-CB 3.28Å; R8-D40 IonicContact NH1-OD1 3.47Å; R8-D40 PolarHBondContact NH1-OD1 2.58Å; R8-D40 IonicContact NH1-OD2 2.7Å; R8-D40 PolarHBondContact NH1-OD2 3.07Å; R8-D40 IonicContact NH2-OD1 3.05Å; R8-D40 PolarHBondContact NH2-OD1 3.24Å; R8-D40 IonicContact NH2-OD2 3.07Å; R8-D40 PolarHBondContact NH2-OD2 2.7Å; R8-D40 VanDerWaalsContact NH2-OD2 3.07Å
9E84.4Confident83.2Confident88 Ų8896.4 Ų96.441%0.41153%0.531SS..THydrogen-bonded Turntrans-63.7-33.2-180-7957.7-127.800111.3D7 N44D7-E9 VanDerWaalsContact C-N 3.34Å; D7-E9 PolarHBondContact OD1-N 2.89Å; E9-N44 VanDerWaalsContact CD-ND2 3.34Å; E9-N44 WeakPolarHBondContact CG-ND2 3.44Å
10S85.1Confident83.7Confident96 Ų9696.3 Ų96.367%0.67153%0.533SS*.THydrogen-bonded Turntrans-74.9-45.8169.5-690000112.8D7 R8D7-S10 PolarHBondContact O-N 2.98Å; D7-S10 VanDerWaalsContact OD2-CB 3.22Å; D7-S10 WeakPolarHBondContact OD2-CB 3.45Å; D7-S10 PolarHBondContact OD2-N 3.24Å; D7-S10 PolarHBondContact OD2-OG 2.82Å; R8-S10 PolarHBondContact O-N 2.94Å
11K85.9Confident84.3Confident100 Ų10094.6 Ų94.644%0.43553%0.526SS..  trans-156.5108.9-178.3-173.4161.3176.8-1790112.9D7 R8 E13 Y14 V38D7-K11 PolarHBondContact O-N 3.22Å; R8-K11 CarbonylContact O-C 3.59Å; R8-K11 VanDerWaalsContact O-C 3.28Å; R8-K11 PolarHBondContact O-N 3.37Å; R8-K11 VanDerWaalsContact O-N 3.17Å; K11-E13 WeakPolarHBondContact CE-O 3.32Å; K11-E13 WeakPolarHBondContact CG-O 3.37Å; K11-Y14 HydrophobicContact CB-CE2 4.38Å; K11-Y14 HydrophobicContact CD-CD1 4.04Å; K11-Y14 HydrophobicContact CD-CE1 3.5Å; K11-Y14 HydrophobicContact CD-CE2 4.14Å; K11-Y14 VanDerWaalsContact CE-CD1 3.45Å; K11-Y14 VanDerWaalsContact CE-CE1 3.47Å; K11-Y14 HydrophobicContact CG-CD2 4.46Å; K11-Y14 HydrophobicContact CG-CE1 4.2Å; K11-Y14 HydrophobicContact CG-CE2 3.91Å; K11-V38 WeakPolarHBondContact O-CG2 3.22Å
12A87.8Confident86.6Confident54 Ų5485.9 Ų85.945%0.44648%0.484SS..SBendtrans-78.6-24.3-177.900000114.9R8 V38R8-A12 HydrophobicContact CG-CB 4Å; R8-A12 PolarHBondContact O-N 2.85Å; A12-V38 PolarHBondContact O-N 2.86Å
13E91.4Very high87.8Confident77 Ų7789 Ų8936%0.3650%0.496SS..EExtended strand (participates in β ladder)trans-143.5144.1-173.4-170.2-179.793.100113K11 N15 T35 L36K11-E13 WeakPolarHBondContact CE-O 3.32Å; K11-E13 WeakPolarHBondContact CG-O 3.37Å; E13-N15 PolarHBondContact OE1-ND2 2.87Å; E13-T35 HydrophobicContact CG-CG2 3.63Å; E13-T35 WeakPolarHBondContact OE2-CG2 3.48Å; E13-L36 CarbonylContact C-O 3.51Å; E13-L36 WeakPolarHBondContact CA-O 3.18Å
14Y90.4Very high88.8Confident70 Ų7080.1 Ų80.128%0.27546%0.463SS..EExtended strand (participates in β ladder)trans-123.7125.3170.7-60.9-102.8000109.7L6 K11 L36 V38L6-Y14 HydrophobicContact CD2-CE2 4.11Å; K11-Y14 HydrophobicContact CB-CE2 4.38Å; K11-Y14 HydrophobicContact CD-CD1 4.04Å; K11-Y14 HydrophobicContact CD-CE1 3.5Å; K11-Y14 HydrophobicContact CD-CE2 4.14Å; K11-Y14 VanDerWaalsContact CE-CD1 3.45Å; K11-Y14 VanDerWaalsContact CE-CE1 3.47Å; K11-Y14 HydrophobicContact CG-CD2 4.46Å; K11-Y14 HydrophobicContact CG-CE1 4.2Å; K11-Y14 HydrophobicContact CG-CE2 3.91Å; Y14-L36 PolarHBondContact N-O 3.37Å; Y14-L36 PolarHBondContact O-N 3.17Å; Y14-V38 HydrophobicContact CD2-CG2 4.22Å; Y14-V38 HydrophobicContact CE2-CG2 3.79Å
15N93.3Very high89.6Confident104 Ų10485.2 Ų85.256%0.55649%0.485SS*.EExtended strand (participates in β ladder)trans-98.7115.1171.7-73.2-68.2000109E13 T35E13-N15 PolarHBondContact OE1-ND2 2.87Å; N15-T35 PolarHBondContact OD1-OG1 3.24Å; N15-T35 VanDerWaalsContact OD1-OG1 3.11Å
16I91.6Very high89.9Confident78 Ų7885.5 Ų85.540%0.448%0.478SS..EExtended strand (participates in β ladder)trans-112114.7-175.1-57.2171000108S33 I34 L36I16-S33 CarbonylContact O-C 3.28Å; I16-S33 WeakPolarHBondContact O-CA 3.01Å; I16-I34 HydrophobicContact CB-CB 4.42Å; I16-I34 PolarHBondContact N-O 2.8Å; I16-I34 PolarHBondContact O-N 3.33Å; I16-L36 HydrophobicContact CD1-CD1 4.22Å
17T95.4Very high90.3Very high79 Ų7989 Ų8949%0.48549%0.486SS..EExtended strand (participates in β ladder)trans-98120.6175.3-52.60000110E31T17-E31 HydrophobicContact CG2-CB 4.16Å; T17-E31 HydrophobicContact CG2-CG 4.42Å
18I93.8Very high91Very high77 Ų7791.7 Ų91.740%0.39550%0.499SS..EExtended strand (participates in β ladder)trans-96.1116173.7-57.7175.7000107.9V20 E31 H32 I34I18-V20 HydrophobicContact CG2-CG2 4.31Å; I18-E31 CarbonylContact O-C 3.4Å; I18-E31 VanDerWaalsContact O-CA 3.26Å; I18-E31 WeakPolarHBondContact O-CA 3.26Å; I18-H32 PolarHBondContact N-O 3.38Å; I18-H32 PolarHBondContact O-N 2.83Å; I18-I34 HydrophobicContact CD1-CD1 3.53Å; I18-I34 HydrophobicContact CD1-CG1 4.35Å; I18-I34 HydrophobicContact CG1-CD1 4.43Å
19T95Very high91.4Very high71 Ų7194.5 Ų94.544%0.43651%0.514SS..EExtended strand (participates in β ladder)trans-103119.5172.9-51.20000109.8K29 T30 E31T19-K29 HydrophobicContact CG2-CB 4.41Å; T19-T30 WeakPolarHBondContact CA-O 3.36Å; T19-E31 HydrophobicContact CG2-CG 3.92Å
20V92.9Very high91.8Very high95 Ų9595.1 Ų95.158%0.57652%0.524SS*.EExtended strand (participates in β ladder)trans-102128.9171.5-175.80000107.9I18 K29 T30I18-V20 HydrophobicContact CG2-CG2 4.31Å; V20-K29 CarbonylContact O-C 3.59Å; V20-K29 WeakPolarHBondContact O-CA 3.43Å; V20-T30 PolarHBondContact N-O 2.78Å; V20-T30 PolarHBondContact O-N 2.88Å
21T95.4Very high92.3Very high60 Ų6096 Ų9637%0.36852%0.517SS..EExtended strand (participates in β ladder)trans-124.9132.3176.3-49.70000109.2R27 L28 K29T21-R27 HydrophobicContact CG2-CB 4.22Å; T21-R27 VanDerWaalsContact CG2-NH2 3.32Å; T21-L28 WeakPolarHBondContact CA-O 3.44Å; T21-K29 HydrophobicContact CG2-CB 4.36Å
22D92.6Very high92.7Very high64 Ų6497.3 Ų97.334%0.34253%0.525SS..  trans-78.7177174.671.625.6000112.3G24 R27 L28D22-G24 PolarHBondContact OD1-N 2.93Å; D22-R27 PolarHBondContact O-NE 2.84Å; D22-R27 PolarHBondContact O-NH2 2.77Å; D22-R27 VanDerWaalsContact OD1-CA 3.26Å; D22-R27 WeakPolarHBondContact OD1-CA 3.49Å; D22-L28 PolarHBondContact N-O 3.37Å; D22-L28 PolarHBondContact OD1-N 3.11Å; D22-L28 VanDerWaalsContact OD2-CB 3.32Å; D22-L28 WeakPolarHBondContact OD2-CB 3.42Å; D22-L28 PolarHBondContact OD2-N 2.91Å
23L94.2Very high93.1Very high162 Ų16298.4 Ų98.485%0.84853%0.529SS*.SBendtrans-103.218.1176-61.5177.3000112.2
24G91.4Very high93.2Very high31 Ų3198 Ų9832%0.3253%0.529SS..  trans-74.3171.1-178.900000113.4D22 P26 R27D22-G24 PolarHBondContact OD1-N 2.93Å; G24-P26 CarbonylContact C-O 3.58Å; G24-P26 CarbonylContact O-C 3.34Å; G24-R27 WeakPolarHBondContact O-CA 3.26Å; G24-R27 WeakPolarHBondContact O-CG 3.2Å; G24-R27 PolarHBondContact O-N 2.84Å
25T92.4Very high93.3Very high151 Ų15198.3 Ų98.393%0.92654%0.538SS*.SBendtrans-129.3102.8171.2-39.80000108.2
26P87.2Confident93.1Very high111 Ų11197.1 Ų97.172%0.72153%0.531SS*.SBendcis-72.5154.12.231.8-35.4000112.9G24G24-P26 CarbonylContact C-O 3.58Å; G24-P26 CarbonylContact O-C 3.34Å
27R91.4Very high93Very high157 Ų157100.6 Ų100.659%0.59255%0.546SS*.PPolyproline II helixtrans-74.8132.7177.3-62.5178.874.5-169.53.6110.3T21 D22 G24T21-R27 HydrophobicContact CG2-CB 4.22Å; T21-R27 VanDerWaalsContact CG2-NH2 3.32Å; D22-R27 PolarHBondContact O-NE 2.84Å; D22-R27 PolarHBondContact O-NH2 2.77Å; D22-R27 VanDerWaalsContact OD1-CA 3.26Å; D22-R27 WeakPolarHBondContact OD1-CA 3.49Å; G24-R27 WeakPolarHBondContact O-CA 3.26Å; G24-R27 WeakPolarHBondContact O-CG 3.2Å; G24-R27 PolarHBondContact O-N 2.84Å
28L93.6Very high92.6Very high116 Ų11697.8 Ų97.861%0.60753%0.529SS*.PPolyproline II helixtrans-99.3147169.6-57176000110.3T21 D22T21-L28 WeakPolarHBondContact CA-O 3.44Å; D22-L28 PolarHBondContact N-O 3.37Å; D22-L28 PolarHBondContact OD1-N 3.11Å; D22-L28 VanDerWaalsContact OD2-CB 3.32Å; D22-L28 WeakPolarHBondContact OD2-CB 3.42Å; D22-L28 PolarHBondContact OD2-N 2.91Å
29K93.7Very high92Very high143 Ų14398.7 Ų98.762%0.62254%0.542SS*.EExtended strand (participates in β ladder)trans-128.8145.2174.156.7173.7178.5169.90111T19 V20 T21T19-K29 HydrophobicContact CG2-CB 4.41Å; V20-K29 CarbonylContact O-C 3.59Å; V20-K29 WeakPolarHBondContact O-CA 3.43Å; T21-K29 HydrophobicContact CG2-CB 4.36Å
30T93.2Very high91.1Very high101 Ų10199.7 Ų99.762%0.6255%0.545SS*.EExtended strand (participates in β ladder)trans-132.5140.3173.9-57.30000108.5T19 V20T19-T30 WeakPolarHBondContact CA-O 3.36Å; V20-T30 PolarHBondContact N-O 2.78Å; V20-T30 PolarHBondContact O-N 2.88Å
31E95.4Very high90.2Very high115 Ų11599.5 Ų99.554%0.53754%0.543SS..EExtended strand (participates in β ladder)trans-116.4143.6-179.8-67.2177.8-176.300109.9T17 I18 T19T17-E31 HydrophobicContact CG2-CB 4.16Å; T17-E31 HydrophobicContact CG2-CG 4.42Å; I18-E31 CarbonylContact O-C 3.4Å; I18-E31 VanDerWaalsContact O-CA 3.26Å; I18-E31 WeakPolarHBondContact O-CA 3.26Å; T19-E31 HydrophobicContact CG2-CG 3.92Å
32H94.9Very high89Confident127 Ų127103.5 Ų103.559%0.58856%0.562SS**EExtended strand (participates in β ladder)trans-135.7130.9173.1-166.367.2000109.9I18I18-H32 PolarHBondContact N-O 3.38Å; I18-H32 PolarHBondContact O-N 2.83Å
33S95Very high87.9Confident77 Ų77105.2 Ų105.254%0.53857%0.571SS.*EExtended strand (participates in β ladder)trans-104132.8-177.7-58.80000110.9I16I16-S33 CarbonylContact O-C 3.28Å; I16-S33 WeakPolarHBondContact O-CA 3.01Å
34I93.7Very high86.8Confident69 Ų69101.9 Ų101.935%0.35456%0.555SS.*EExtended strand (participates in β ladder)trans-115.5125.4174.7-57.4176.3000108I16 I18I16-I34 HydrophobicContact CB-CB 4.42Å; I16-I34 PolarHBondContact N-O 2.8Å; I16-I34 PolarHBondContact O-N 3.33Å; I18-I34 HydrophobicContact CD1-CD1 3.53Å; I18-I34 HydrophobicContact CD1-CG1 4.35Å; I18-I34 HydrophobicContact CG1-CD1 4.43Å
35T93.1Very high86.2Confident77 Ų77104.3 Ų104.347%0.47257%0.572SS.*EExtended strand (participates in β ladder)trans-98.3118173.1-56.70000109E13 N15E13-T35 HydrophobicContact CG-CG2 3.63Å; E13-T35 WeakPolarHBondContact OE2-CG2 3.48Å; N15-T35 PolarHBondContact OD1-OG1 3.24Å; N15-T35 VanDerWaalsContact OD1-OG1 3.11Å
36L88.5Confident85.7Confident79 Ų79101.4 Ų101.441%0.41456%0.556SS.*EExtended strand (participates in β ladder)trans-109.6116.4-177.9-150.7128.1000109E13 Y14 I16E13-L36 CarbonylContact C-O 3.51Å; E13-L36 WeakPolarHBondContact CA-O 3.18Å; Y14-L36 PolarHBondContact N-O 3.37Å; Y14-L36 PolarHBondContact O-N 3.17Å; I16-L36 HydrophobicContact CD1-CD1 4.22Å
37Q89.4Confident85.6Confident150 Ų15099.1 Ų99.170%0.70155%0.546SS*.EExtended strand (participates in β ladder)trans-101130-178.8-66.8-175.4-27.100110.3
38V87.4Confident85.5Confident21 Ų2198 Ų9813%0.12755%0.545CS..PPolyproline II helixtrans-81120.7173.6-175.10000108L6 R8 K11 A12 Y14L6-V38 HydrophobicContact CB-CG1 4.17Å; R8-V38 HydrophobicContact CB-CB 4.41Å; R8-V38 HydrophobicContact CB-CG1 4.01Å; R8-V38 HydrophobicContact CG-CB 4.39Å; R8-V38 HydrophobicContact CG-CG1 4.49Å; K11-V38 WeakPolarHBondContact O-CG2 3.22Å; A12-V38 PolarHBondContact O-N 2.86Å; Y14-V38 HydrophobicContact CD2-CG2 4.22Å; Y14-V38 HydrophobicContact CE2-CG2 3.79Å
39S80.9Confident85.2Confident95 Ų9597 Ų9766%0.66454%0.544SS*.PPolyproline II helixtrans-65.7137.5177.956.20000110.7
40D76.1Confident84.8Confident93 Ų9395.5 Ų95.550%0.49754%0.54SS..PPolyproline II helixtrans-65.2131.8172.1-164.43.9000110.9R8R8-D40 IonicContact CZ-OD1 3.12Å; R8-D40 IonicContact CZ-OD2 3.11Å; R8-D40 IonicContact NE-OD1 3.51Å; R8-D40 VanDerWaalsContact NH1-CB 3.28Å; R8-D40 IonicContact NH1-OD1 3.47Å; R8-D40 PolarHBondContact NH1-OD1 2.58Å; R8-D40 IonicContact NH1-OD2 2.7Å; R8-D40 PolarHBondContact NH1-OD2 3.07Å; R8-D40 IonicContact NH2-OD1 3.05Å; R8-D40 PolarHBondContact NH2-OD1 3.24Å; R8-D40 IonicContact NH2-OD2 3.07Å; R8-D40 PolarHBondContact NH2-OD2 2.7Å; R8-D40 VanDerWaalsContact NH2-OD2 3.07Å
41V75.1Confident84.5Confident91 Ų9198.2 Ų98.255%0.55256%0.556SS**  trans-120.6131.6165.4178.40000105.1D43V41-D43 HydrophobicContact CG1-CB 4.47Å; V41-D43 PolarHBondContact O-N 3.05Å; V41-D43 VanDerWaalsContact O-OD1 3.08Å
42N69.9Low84.2Confident143 Ų14396.9 Ų96.977%0.76556%0.559SS**  trans-74.771.6176.9-172.725.6000110.5
43D69.1Low84Confident100 Ų10094.2 Ų94.254%0.53555%0.545SS..  trans-96.7-9.9176.960.7-3.1000112.9V41 A45V41-D43 HydrophobicContact CG1-CB 4.47Å; V41-D43 PolarHBondContact O-N 3.05Å; V41-D43 VanDerWaalsContact O-OD1 3.08Å; D43-A45 PolarHBondContact O-N 3.47Å
44N71.6Confident83.8Confident93 Ų9395.6 Ų95.650%0.49755%0.55SS.*  trans-93.282172.3-70.6-70.2000110.7E9E9-N44 VanDerWaalsContact CD-ND2 3.34Å; E9-N44 WeakPolarHBondContact CG-ND2 3.44Å
45A79.6Confident83.5Confident82 Ų8297.1 Ų97.168%0.67856%0.558SS**  trans-68.2134.7172.800000110.5D43 A47D43-A45 PolarHBondContact O-N 3.47Å; A45-A47 PolarHBondContact O-N 3.36Å
46P82.2Confident83.3Confident90 Ų90102.5 Ų102.558%0.58458%0.575SS**  trans-62.5132.3-176.523.1-32.2000111A72 T73P46-A72 HydrophobicContact CB-CB 4.13Å; P46-T73 CarbonylContact C-O 3.52Å; P46-T73 WeakPolarHBondContact CA-O 3.28Å
47A84.9Confident83.3Confident62 Ų62102.9 Ų102.951%0.51258%0.581SS.*  trans-107.5136.2179.800000110.7A45 A72 T73A45-A47 PolarHBondContact O-N 3.36Å; A47-A72 WeakPolarHBondContact O-CA 3.18Å; A47-A72 WeakPolarHBondContact O-CB 3.32Å; A47-T73 PolarHBondContact N-O 3.46Å; A47-T73 PolarHBondContact O-N 2.65Å; A47-T73 VanDerWaalsContact O-N 3.12Å
48F89.4Confident83.3Confident133 Ų133106.1 Ų106.158%0.58359%0.587SS**BIsolated β-bridgetrans-64.1141.5171.9-73.1-75.8000110.7Q50 Y53 V70 A72F48-Q50 PolarHBondContact O-N 2.84Å; F48-Y53 HydrophobicContact CB-CE2 4.13Å; F48-Y53 HydrophobicContact CD1-CE2 4.05Å; F48-Y53 HydrophobicContact CG-CE2 4.36Å; F48-V70 HydrophobicContact CE1-CG2 4.03Å; F48-A72 HydrophobicContact CD1-CB 4.07Å; F48-A72 HydrophobicContact CE1-CB 4.35Å; F48-A72 HydrophobicContact CG-CB 4.37Å
49T86.3Confident83.2Confident96 Ų96114 Ų11459%0.58962%0.622SS**SBendtrans-66.8-20.3-179.857.30000113.8Y53 S71T49-Y53 PolarHBondContact N-OH 3.35Å; T49-Y53 PolarHBondContact OG1-OH 3.06Å; T49-S71 PolarHBondContact N-O 3.25Å
50Q86Confident83.5Confident112 Ų112117.5 Ų117.552%0.52363%0.633SS.*SBendtrans-134.2146.1177-62.4-176.9-48.800111F48 S52 Y53F48-Q50 PolarHBondContact O-N 2.84Å; Q50-S52 PolarHBondContact O-N 3.12Å; Q50-Y53 HydrophobicContact CB-CD1 4.29Å; Q50-Y53 HydrophobicContact CB-CE1 3.84Å; Q50-Y53 HydrophobicContact CB-CE2 4.12Å; Q50-Y53 HydrophobicContact CG-CE1 3.97Å; Q50-Y53 PolarHBondContact N-OH 3.01Å; Q50-Y53 VanDerWaalsContact OE1-CE1 3.24Å
51T85.8Confident84Confident158 Ų158116.5 Ų116.597%0.96963%0.628SS**SBendtrans-66.1-24.3173.2-43.40000112.4
52S89Confident84.7Confident86 Ų86115.8 Ų115.860%0.60163%0.627SS**  trans-151.8137.6177.261.10000111.2Q50Q50-S52 PolarHBondContact O-N 3.12Å
53Y90.4Very high85.3Confident72 Ų72115.1 Ų115.128%0.28263%0.631SS.*  trans-113.1126.3173.3-60.8-90.9000109.9F48 T49 Q50 V70 S71F48-Y53 HydrophobicContact CB-CE2 4.13Å; F48-Y53 HydrophobicContact CD1-CE2 4.05Å; F48-Y53 HydrophobicContact CG-CE2 4.36Å; T49-Y53 PolarHBondContact N-OH 3.35Å; T49-Y53 PolarHBondContact OG1-OH 3.06Å; Q50-Y53 HydrophobicContact CB-CD1 4.29Å; Q50-Y53 HydrophobicContact CB-CE1 3.84Å; Q50-Y53 HydrophobicContact CB-CE2 4.12Å; Q50-Y53 HydrophobicContact CG-CE1 3.97Å; Q50-Y53 PolarHBondContact N-OH 3.01Å; Q50-Y53 VanDerWaalsContact OE1-CE1 3.24Å; Y53-V70 HydrophobicContact CD1-CG1 3.76Å; Y53-V70 HydrophobicContact CD2-CB 4.4Å; Y53-V70 HydrophobicContact CD2-CG1 3.73Å; Y53-V70 HydrophobicContact CE1-CB 4.42Å; Y53-V70 HydrophobicContact CE1-CG1 4.07Å; Y53-V70 HydrophobicContact CE2-CB 4.23Å; Y53-V70 HydrophobicContact CE2-CG1 4.04Å; Y53-V70 HydrophobicContact CG-CG1 3.58Å; Y53-S71 PolarHBondContact OH-O 3.43Å
54T91Very high86Confident106 Ų106115.6 Ų115.665%0.6565%0.648SS**  trans-113.4122.6175.4-57.10000109F56T54-F56 HydrophobicContact CG2-CE1 4.43Å; T54-F56 HydrophobicContact CG2-CE2 4Å; T54-F56 HydrophobicContact CG2-CZ 3.85Å
55L88.8Confident86.8Confident100 Ų100114.9 Ų114.952%0.52464%0.644SS.*  trans-119140.7179-59.9171.2000109.5I67L55-I67 HydrophobicContact CB-CG2 3.9Å; L55-I67 HydrophobicContact CD1-CG2 4.13Å
56F88.2Confident87.2Confident190 Ų190117.7 Ų117.783%0.83364%0.643SS**  trans-111.2132.1178.4-62.5-82.6000110.1T54T54-F56 HydrophobicContact CG2-CE1 4.43Å; T54-F56 HydrophobicContact CG2-CE2 4Å; T54-F56 HydrophobicContact CG2-CZ 3.85Å
57V88.8Confident87.5Confident87 Ų87117.9 Ų117.953%0.52764%0.638SS.*  trans-128136.9177.365.70000109N61 L65 I67V57-N61 VanDerWaalsContact CG2-ND2 3.32Å; V57-N61 WeakPolarHBondContact CG2-ND2 3.39Å; V57-L65 HydrophobicContact CG2-CD2 4.36Å; V57-I67 HydrophobicContact CB-CD1 4.41Å; V57-I67 HydrophobicContact CB-CG2 4.42Å; V57-I67 HydrophobicContact CG2-CD1 4.29Å; V57-I67 HydrophobicContact CG2-CG1 4.27Å
58R90Very high87.5Confident218 Ų218116.5 Ų116.582%0.82363%0.63SS**  trans-73.7157.7175-70.9-177.1179.3157.6-0110.7N61R58-N61 PolarHBondContact N-ND2 2.71Å; R58-N61 PolarHBondContact O-ND2 3.47Å
59E83.4Confident87.6Confident187 Ų187115.2 Ų115.287%0.87464%0.637SS**SBendtrans-69.6157.9166.563.5-170.913700110.9
60N88.6Confident87.7Confident168 Ų168114.5 Ų114.590%0.89863%0.632SS**SBendtrans64.336.7176.6-157.137.2000116.3
61N86Confident87.8Confident73 Ų73112.6 Ų112.639%0.3963%0.631SS.*PPolyproline II helixtrans-79.9156.4173.8-79.5-60.4000113V57 R58 L65V57-N61 VanDerWaalsContact CG2-ND2 3.32Å; V57-N61 WeakPolarHBondContact CG2-ND2 3.39Å; R58-N61 PolarHBondContact N-ND2 2.71Å; R58-N61 PolarHBondContact O-ND2 3.47Å; N61-L65 HydrophobicContact CB-CB 4.28Å; N61-L65 HydrophobicContact CB-CD2 3.55Å; N61-L65 VanDerWaalsContact OD1-CD2 3.28Å; N61-L65 WeakPolarHBondContact OD1-CD2 3.37Å
62S89.6Confident87.8Confident76 Ų76107 Ų10753%0.53160%0.601SS.*PPolyproline II helixtrans-61.4145.9175.555.90000111.5A64 L65S62-A64 PolarHBondContact O-N 3.1Å; S62-L65 PolarHBondContact O-N 3.45Å
63P83.8Confident87.2Confident129 Ų129109.8 Ų109.884%0.83862%0.615SS**THydrogen-bonded Turntrans-51138.5168-23.633000110.5
64A83.6Confident87.1Confident109 Ų109111.7 Ų111.790%0.90163%0.631SS**THydrogen-bonded Turntrans67.523.3-177.400000116.6S62 H66S62-A64 PolarHBondContact O-N 3.1Å; A64-H66 PolarHBondContact O-N 3.48Å
65L87.7Confident86.8Confident78 Ų78111.9 Ų111.941%0.40863%0.63SS.*  trans-60.4124.8169.7-178.966.9000111V57 N61 S62 I67V57-L65 HydrophobicContact CG2-CD2 4.36Å; N61-L65 HydrophobicContact CB-CB 4.28Å; N61-L65 HydrophobicContact CB-CD2 3.55Å; N61-L65 VanDerWaalsContact OD1-CD2 3.28Å; N61-L65 WeakPolarHBondContact OD1-CD2 3.37Å; S62-L65 PolarHBondContact O-N 3.45Å; L65-I67 PolarHBondContact O-N 3.2Å
66H87.7Confident86.7Confident141 Ų141112.6 Ų112.665%0.65364%0.636SS**  trans-74.7119.4171.2-179.372.3000110.1A64 G68A64-H66 PolarHBondContact O-N 3.48Å; H66-G68 VanDerWaalsContact CE1-C 3.48Å; H66-G68 PolarHBondContact CE1-O 3.41Å; H66-G68 PolarHBondContact NE2-O 3.25Å
67I88.3Confident86.7Confident95 Ų95108.1 Ų108.149%0.48763%0.625SS.*  trans-90.9-33.6-174.4-58.4172.1000111.6L55 V57 L65L55-I67 HydrophobicContact CB-CG2 3.9Å; L55-I67 HydrophobicContact CD1-CG2 4.13Å; V57-I67 HydrophobicContact CB-CD1 4.41Å; V57-I67 HydrophobicContact CB-CG2 4.42Å; V57-I67 HydrophobicContact CG2-CD1 4.29Å; V57-I67 HydrophobicContact CG2-CG1 4.27Å; L65-I67 PolarHBondContact O-N 3.2Å
68G86.2Confident86.5Confident33 Ų33109.4 Ų109.434%0.3463%0.631SS.*  trans168.4172.7-18000000112.4H66H66-G68 VanDerWaalsContact CE1-C 3.48Å; H66-G68 PolarHBondContact CE1-O 3.41Å; H66-G68 PolarHBondContact NE2-O 3.25Å
69S89.6Confident86.3Confident105 Ų105102.1 Ų102.173%0.73462%0.618SS**  trans-127.1147.6174.753.90000110
70V89.8Confident86.5Confident81 Ų8196.1 Ų96.149%0.49160%0.6SS.*  trans-115151.8171.6-63.60000108.4F48 Y53F48-V70 HydrophobicContact CE1-CG2 4.03Å; Y53-V70 HydrophobicContact CD1-CG1 3.76Å; Y53-V70 HydrophobicContact CD2-CB 4.4Å; Y53-V70 HydrophobicContact CD2-CG1 3.73Å; Y53-V70 HydrophobicContact CE1-CB 4.42Å; Y53-V70 HydrophobicContact CE1-CG1 4.07Å; Y53-V70 HydrophobicContact CE2-CB 4.23Å; Y53-V70 HydrophobicContact CE2-CG1 4.04Å; Y53-V70 HydrophobicContact CG-CG1 3.58Å
71S86.8Confident86.3Confident72 Ų7290.5 Ų90.550%0.50358%0.577SS.*  trans-132.1146.8-177.3-1770000110T49 Y53T49-S71 PolarHBondContact N-O 3.25Å; Y53-S71 PolarHBondContact OH-O 3.43Å
72A85.8Confident86.4Confident40 Ų4092 Ų9233%0.33159%0.592SS.*BIsolated β-bridgetrans-134146.7173.800000108.8P46 A47 F48P46-A72 HydrophobicContact CB-CB 4.13Å; A47-A72 WeakPolarHBondContact O-CA 3.18Å; A47-A72 WeakPolarHBondContact O-CB 3.32Å; F48-A72 HydrophobicContact CD1-CB 4.07Å; F48-A72 HydrophobicContact CE1-CB 4.35Å; F48-A72 HydrophobicContact CG-CB 4.37Å
73T77.7Confident86.1Confident145 Ų14593.5 Ų93.589%0.8960%0.598SS**  trans-1290178.752.40000110.4P46 A47P46-T73 CarbonylContact C-O 3.52Å; P46-T73 WeakPolarHBondContact CA-O 3.28Å; A47-T73 PolarHBondContact N-O 3.46Å; A47-T73 PolarHBondContact O-N 2.65Å; A47-T73 VanDerWaalsContact O-N 3.12Å

Retrieved 73 of 73 residues in 356.8 ms (Link to these results)