A0A096LS80_POEFO Loading...

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

AlphaFold DB , UniProt , Accession A0A096LS80, Species POEFO (Poecilia formosa, Amazon molly), Gene n/a, Length 108 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M69.8Low90.8Very high169 Ų169109.5 Ų109.583%0.83357%0.568SS**  0144.90-66.2-169.3-79.900110.7Y28M1-Y28 VanDerWaalsContact C-CD1 3.44Å; M1-Y28 WeakPolarHBondContact O-CE1 3.36Å
2A82.6Confident91.3Very high42 Ų42106.6 Ų106.635%0.34754%0.544SS..  trans-72132.5173.100000110.7L24 Y28A2-L24 HydrophobicContact CB-CD1 3.79Å; A2-Y28 VanDerWaalsContact CA-CZ 3.48Å; A2-Y28 WeakPolarHBondContact CA-OH 3.47Å; A2-Y28 HydrophobicContact CB-CE1 4.28Å; A2-Y28 HydrophobicContact CB-CE2 3.81Å
3T84.3Confident91.6Very high130 Ų130100.6 Ų100.680%0.79851%0.514SS*.  trans-115.16.2-164.752.30000115.5
4A90.9Very high92Very high50 Ų50103.1 Ų103.141%0.41353%0.528SS..  trans-64.5137.1179.200000111.7
5T95.4Very high92.4Very high87 Ų87105.6 Ų105.653%0.53454%0.542SS..  trans-67.9152.2175.266.20000110.8I7 I8 Q9T5-I7 PolarHBondContact O-N 3.34Å; T5-I7 VanDerWaalsContact O-N 3.14Å; T5-I8 PolarHBondContact O-N 3.14Å; T5-I8 VanDerWaalsContact O-N 3.09Å; T5-I8 WeakPolarHBondContact OG1-CG1 3.26Å; T5-Q9 PolarHBondContact O-N 3.34Å
6K94.7Very high92.6Very high164 Ų164101.5 Ų101.571%0.71353%0.529SS*.Hα-helixtrans-57.3-32.6-176.2-68.9-175.6178.1178.90113.4R10K6-R10 VanDerWaalsContact O-CG 3.31Å; K6-R10 WeakPolarHBondContact O-CG 3.24Å; K6-R10 PolarHBondContact O-N 2.68Å; K6-R10 VanDerWaalsContact O-N 3.12Å
7I97Very high92.8Very high136 Ų13699.6 Ų99.670%0.69754%0.54SS*.Hα-helixtrans-67.4-48.9177.7-63.5171.8000110.2T5 Q9 R10 L11T5-I7 PolarHBondContact O-N 3.34Å; T5-I7 VanDerWaalsContact O-N 3.14Å; I7-Q9 VanDerWaalsContact C-N 3.34Å; I7-Q9 PolarHBondContact O-N 3.08Å; I7-R10 PolarHBondContact O-N 3.38Å; I7-L11 PolarHBondContact O-N 3.18Å
8I96.8Very high92.9Very high95 Ų95100.3 Ų100.349%0.48754%0.539SS..Hα-helixtrans-66.7-37.5179.7-61.8-59.9000111.3T5 R10 L11 R12T5-I8 PolarHBondContact O-N 3.14Å; T5-I8 VanDerWaalsContact O-N 3.09Å; T5-I8 WeakPolarHBondContact OG1-CG1 3.26Å; I8-R10 PolarHBondContact O-N 3.31Å; I8-L11 PolarHBondContact O-N 3.41Å; I8-R12 VanDerWaalsContact O-CB 3.32Å; I8-R12 WeakPolarHBondContact O-CB 3.23Å; I8-R12 PolarHBondContact O-N 2.98Å
9Q95.3Very high93Very high50 Ų5099 Ų9923%0.23453%0.532CS..Hα-helixtrans-59.6-45.4174.4-173.1-172.6-15.900111.8T5 I7 R12 N13 Q21T5-Q9 PolarHBondContact O-N 3.34Å; I7-Q9 VanDerWaalsContact C-N 3.34Å; I7-Q9 PolarHBondContact O-N 3.08Å; Q9-R12 PolarHBondContact O-N 3.1Å; Q9-N13 WeakPolarHBondContact O-CB 3.45Å; Q9-N13 VanDerWaalsContact O-CG 3.26Å; Q9-N13 PolarHBondContact O-N 3.28Å; Q9-N13 PolarHBondContact O-OD1 3.07Å; Q9-Q21 VanDerWaalsContact NE2-CB 3.26Å
10R94.9Very high93.1Very high191 Ų19196.7 Ų96.772%0.72152%0.519SS*.Hα-helixtrans-65.3-44.4178.1-74.4176.8-179.2-172.7-0.7112K6 I7 I8 R12 N13 L14K6-R10 VanDerWaalsContact O-CG 3.31Å; K6-R10 WeakPolarHBondContact O-CG 3.24Å; K6-R10 PolarHBondContact O-N 2.68Å; K6-R10 VanDerWaalsContact O-N 3.12Å; I7-R10 PolarHBondContact O-N 3.38Å; I8-R10 PolarHBondContact O-N 3.31Å; R10-R12 PolarHBondContact O-N 2.95Å; R10-N13 PolarHBondContact O-N 3.04Å; R10-L14 WeakPolarHBondContact O-CB 3.02Å; R10-L14 PolarHBondContact O-N 3.38Å
11L97.4Very high93Very high90 Ų9095 Ų9547%0.47151%0.508SS..Hα-helixtrans-59.5-47.1176.2177.261.4000111.4I7 I8 L14 L15I7-L11 PolarHBondContact O-N 3.18Å; I8-L11 PolarHBondContact O-N 3.41Å; L11-L14 PolarHBondContact O-N 3.08Å; L11-L15 HydrophobicContact CD1-CD1 4.11Å; L11-L15 HydrophobicContact CD1-CG 4.24Å; L11-L15 HydrophobicContact CG-CD1 4.25Å; L11-L15 WeakPolarHBondContact O-CG 3.38Å; L11-L15 PolarHBondContact O-N 3.11Å
12R95.9Very high94.1Very high75 Ų7591 Ų9128%0.28350%0.496SS..Hα-helixtrans-59.6-48.6178.1-176.9-164.164.5-163.6-1.3111.9I8 Q9 R10 L14 L15 A16 L20I8-R12 VanDerWaalsContact O-CB 3.32Å; I8-R12 WeakPolarHBondContact O-CB 3.23Å; I8-R12 PolarHBondContact O-N 2.98Å; Q9-R12 PolarHBondContact O-N 3.1Å; R10-R12 PolarHBondContact O-N 2.95Å; R12-L14 VanDerWaalsContact C-N 3.31Å; R12-L14 PolarHBondContact O-N 3.43Å; R12-L15 PolarHBondContact O-N 3.2Å; R12-A16 WeakPolarHBondContact O-CB 3.4Å; R12-A16 PolarHBondContact O-N 3.13Å; R12-L20 HydrophobicContact CG-CD1 3.79Å
13N96.1Very high94.6Very high29 Ų2997.4 Ų97.416%0.15552%0.516CS..Hα-helixtrans-66-35.2-179-71.13.2000111.7Q9 R10 G17 H18 D19 L20Q9-N13 WeakPolarHBondContact O-CB 3.45Å; Q9-N13 VanDerWaalsContact O-CG 3.26Å; Q9-N13 PolarHBondContact O-N 3.28Å; Q9-N13 PolarHBondContact O-OD1 3.07Å; R10-N13 PolarHBondContact O-N 3.04Å; N13-G17 PolarHBondContact O-N 3.06Å; N13-H18 PolarHBondContact O-N 3.02Å; N13-D19 PolarHBondContact ND2-OD1 3Å; N13-L20 PolarHBondContact OD1-N 3.22Å
14L96.6Very high95.1Very high136 Ų13694 Ų9471%0.71249%0.493SS*.Hα-helixtrans-63-49.5174179.267.8000111.6R10 L11 R12 A16 G17R10-L14 WeakPolarHBondContact O-CB 3.02Å; R10-L14 PolarHBondContact O-N 3.38Å; L11-L14 PolarHBondContact O-N 3.08Å; R12-L14 VanDerWaalsContact C-N 3.31Å; R12-L14 PolarHBondContact O-N 3.43Å; L14-A16 VanDerWaalsContact C-N 3.29Å; L14-A16 PolarHBondContact O-N 2.9Å; L14-G17 PolarHBondContact O-N 3.45Å
15L97.6Very high95.2Very high140 Ų140100.4 Ų100.473%0.73351%0.514SS*.Hα-helixtrans-67.3-28.8-179.9-65.2176.8000113L11 R12L11-L15 HydrophobicContact CD1-CD1 4.11Å; L11-L15 HydrophobicContact CD1-CG 4.24Å; L11-L15 HydrophobicContact CG-CD1 4.25Å; L11-L15 WeakPolarHBondContact O-CG 3.38Å; L11-L15 PolarHBondContact O-N 3.11Å; R12-L15 PolarHBondContact O-N 3.2Å
16A95.8Very high95.2Very high40 Ų40101.2 Ų101.233%0.33152%0.515SS..Hα-helixtrans-83.7-14.7177.100000113.8R12 L14 H18 L20R12-A16 WeakPolarHBondContact O-CB 3.4Å; R12-A16 PolarHBondContact O-N 3.13Å; L14-A16 VanDerWaalsContact C-N 3.29Å; L14-A16 PolarHBondContact O-N 2.9Å; A16-H18 PolarHBondContact O-N 3.13Å; A16-H18 PolarHBondContact O-ND1 3.33Å; A16-L20 HydrophobicContact CB-CD1 3.6Å; A16-L20 HydrophobicContact CB-CG 4.14Å
17G96.6Very high95.2Very high70 Ų70101.9 Ų101.972%0.72251%0.513SS*.THydrogen-bonded Turntrans71.98.2-177.800000115.4N13 L14N13-G17 PolarHBondContact O-N 3.06Å; L14-G17 PolarHBondContact O-N 3.45Å
18H95.2Very high95Very high112 Ų11298.9 Ų98.952%0.51949%0.493SS..SBendtrans-157.9166.9178.764.5-77000111.9N13 A16 L20N13-H18 PolarHBondContact O-N 3.02Å; A16-H18 PolarHBondContact O-N 3.13Å; A16-H18 PolarHBondContact O-ND1 3.33Å; H18-L20 WeakPolarHBondContact NE2-CD2 3.32Å; H18-L20 PolarHBondContact O-N 3.22Å
19D94.6Very high94.9Very high75 Ų75102 Ų10240%0.40151%0.506SS..  trans-8197.4-179.4-17926.9000112.9N13 Q21 S22N13-D19 PolarHBondContact ND2-OD1 3Å; D19-Q21 PolarHBondContact O-N 3.49Å; D19-Q21 WeakPolarHBondContact OD1-CB 3.3Å; D19-Q21 PolarHBondContact OD1-N 3.09Å; D19-S22 PolarHBondContact O-OG 3.39Å; D19-S22 PolarHBondContact OD2-N 3.43Å
20L93.6Very high94.8Very high52 Ų52105.7 Ų105.727%0.27252%0.523SS..THydrogen-bonded Turntrans-70.9-16.8174.5-70.3168.8000113.6R12 N13 A16 H18 S22 K23 L24R12-L20 HydrophobicContact CG-CD1 3.79Å; N13-L20 PolarHBondContact OD1-N 3.22Å; A16-L20 HydrophobicContact CB-CD1 3.6Å; A16-L20 HydrophobicContact CB-CG 4.14Å; H18-L20 WeakPolarHBondContact NE2-CD2 3.32Å; H18-L20 PolarHBondContact O-N 3.22Å; L20-S22 VanDerWaalsContact C-N 3.29Å; L20-S22 PolarHBondContact O-N 3.39Å; L20-K23 CarbonylContact O-C 3.38Å; L20-K23 PolarHBondContact O-N 2.92Å; L20-L24 VanDerWaalsContact O-CD2 3.3Å; L20-L24 WeakPolarHBondContact O-CD2 3.21Å
21Q92.5Very high94.9Very high62 Ų6299.8 Ų99.829%0.2951%0.505SS..THydrogen-bonded Turntrans-70.9-29.4179.6-163.968.116.400111.9Q9 D19 K23Q9-Q21 VanDerWaalsContact NE2-CB 3.26Å; D19-Q21 PolarHBondContact O-N 3.49Å; D19-Q21 WeakPolarHBondContact OD1-CB 3.3Å; D19-Q21 PolarHBondContact OD1-N 3.09Å; Q21-K23 VanDerWaalsContact C-N 3.31Å; Q21-K23 PolarHBondContact O-N 3.04Å
22S91.5Very high94.8Very high84 Ų8499.1 Ų99.159%0.58751%0.513SS*.SBendtrans-64.8-31.7176.869.90000113.5D19 L20D19-S22 PolarHBondContact O-OG 3.39Å; D19-S22 PolarHBondContact OD2-N 3.43Å; L20-S22 VanDerWaalsContact C-N 3.29Å; L20-S22 PolarHBondContact O-N 3.39Å
23K93.3Very high94.9Very high178 Ų178103.9 Ų103.977%0.77454%0.535SS*.SBendtrans-139.577.7-176.3-68.7-177.6-179.5178.80110.3L20 Q21L20-K23 CarbonylContact O-C 3.38Å; L20-K23 PolarHBondContact O-N 2.92Å; Q21-K23 VanDerWaalsContact C-N 3.31Å; Q21-K23 PolarHBondContact O-N 3.04Å
24L94.7Very high94.9Very high59 Ų59112.7 Ų112.731%0.30957%0.567SS.*  trans-75.4142.8178.5-67.9171.1000111.6A2 L20 L26 Y28A2-L24 HydrophobicContact CB-CD1 3.79Å; L20-L24 VanDerWaalsContact O-CD2 3.3Å; L20-L24 WeakPolarHBondContact O-CD2 3.21Å; L24-L26 VanDerWaalsContact C-N 3.32Å; L24-Y28 HydrophobicContact CD1-CD2 4.47Å; L24-Y28 HydrophobicContact CD1-CE2 3.76Å
25Q94.1Very high95Very high184 Ų184112.3 Ų112.386%0.8657%0.57SS**SBendtrans-70.6-27.7173.966.8-176.6-1.700113.4
26L95Very high95Very high103 Ų103111.3 Ų111.354%0.53956%0.561SS.*SBendtrans-88.1136178.6-64.4-179.3000109.4L24 Y28L24-L26 VanDerWaalsContact C-N 3.32Å; L26-Y28 HydrophobicContact CB-CE2 4.09Å; L26-Y28 WeakPolarHBondContact O-CD2 3.41Å; L26-Y28 WeakPolarHBondContact O-CE2 3.44Å
27R94.4Very high95.1Very high178 Ų178114.3 Ų114.367%0.67258%0.578SS**  trans-87.2136.4179.3-64.5171.1-68.9-174.3-3110.4E30 I31R27-E30 WeakPolarHBondContact CA-OE1 3.21Å; R27-I31 HydrophobicContact CB-CD1 4.19Å; R27-I31 HydrophobicContact CB-CG2 3.94Å; R27-I31 HydrophobicContact CG-CG2 3.95Å
28Y93.6Very high95.1Very high74 Ų74116.9 Ų116.929%0.2958%0.582SS.*  trans-118.5-120.2174.4-58-83.2000110.6M1 A2 L24 L26 E30M1-Y28 VanDerWaalsContact C-CD1 3.44Å; M1-Y28 WeakPolarHBondContact O-CE1 3.36Å; A2-Y28 VanDerWaalsContact CA-CZ 3.48Å; A2-Y28 WeakPolarHBondContact CA-OH 3.47Å; A2-Y28 HydrophobicContact CB-CE1 4.28Å; A2-Y28 HydrophobicContact CB-CE2 3.81Å; L24-Y28 HydrophobicContact CD1-CD2 4.47Å; L24-Y28 HydrophobicContact CD1-CE2 3.76Å; L26-Y28 HydrophobicContact CB-CE2 4.09Å; L26-Y28 WeakPolarHBondContact O-CD2 3.41Å; L26-Y28 WeakPolarHBondContact O-CE2 3.44Å; Y28-E30 VanDerWaalsContact C-OE2 3.24Å; Y28-E30 VanDerWaalsContact CA-OE2 3.3Å; Y28-E30 WeakPolarHBondContact CA-OE2 3.33Å; Y28-E30 VanDerWaalsContact CB-OE2 3.32Å; Y28-E30 WeakPolarHBondContact CB-OE2 3.13Å; Y28-E30 VanDerWaalsContact N-CD 3.33Å; Y28-E30 PolarHBondContact N-OE1 3.41Å; Y28-E30 PolarHBondContact N-OE2 3.26Å; Y28-E30 VanDerWaalsContact N-OE2 3.08Å
29E93.8Very high95.2Very high159 Ų159116.6 Ų116.674%0.74359%0.59SS**SBendtrans-93.6-7.7-172.1-67.2173.1-159.900112.6I31E29-I31 PolarHBondContact O-N 2.74Å
30E94Very high95.4Very high129 Ų129123 Ų12360%0.60361%0.614SS**SBendtrans-71.3-13.3179.171.5-73.2167.800113.6R27 Y28R27-E30 WeakPolarHBondContact CA-OE1 3.21Å; Y28-E30 VanDerWaalsContact C-OE2 3.24Å; Y28-E30 VanDerWaalsContact CA-OE2 3.3Å; Y28-E30 WeakPolarHBondContact CA-OE2 3.33Å; Y28-E30 VanDerWaalsContact CB-OE2 3.32Å; Y28-E30 WeakPolarHBondContact CB-OE2 3.13Å; Y28-E30 VanDerWaalsContact N-CD 3.33Å; Y28-E30 PolarHBondContact N-OE1 3.41Å; Y28-E30 PolarHBondContact N-OE2 3.26Å; Y28-E30 VanDerWaalsContact N-OE2 3.08Å
31I95.9Very high95.5Very high66 Ų66127.3 Ų127.334%0.33864%0.637SS.*SBendtrans-88.4153.3178.465.1166.5000112R27 E29R27-I31 HydrophobicContact CB-CD1 4.19Å; R27-I31 HydrophobicContact CB-CG2 3.94Å; R27-I31 HydrophobicContact CG-CG2 3.95Å; E29-I31 PolarHBondContact O-N 2.74Å
32A96.4Very high95.8Very high77 Ų77130.2 Ų130.264%0.63666%0.661SS**PPolyproline II helixtrans-56.5144.5174.800000111.9
33K96.8Very high96.1Very high174 Ų174131.2 Ų131.276%0.75766%0.663SS**PPolyproline II helixtrans-59.8157.9176.9-65.8-174.4-179.81800111.6Q36K33-Q36 PolarHBondContact O-NE2 2.77Å
34R97.3Very high96.3Very high215 Ų215124.4 Ų124.481%0.81164%0.644SS**SBendtrans-70.9-38.6176.5-61.7-61.9175.7164-2.1112.6
35T97.6Very high96.4Very high128 Ų128127.1 Ų127.179%0.78567%0.665SS**SBendtrans-90124.2174.2-51.70000109.3
36Q97.8Very high96.5Very high118 Ų118120.6 Ų120.655%0.55164%0.64SS**  trans-112.6149.2177.5-64.7-62.5-3500109.6K33K33-Q36 PolarHBondContact O-NE2 2.77Å
37P97.8Very high96.6Very high103 Ų103122.1 Ų122.167%0.66964%0.644SS**PPolyproline II helixtrans-64.4154.717329.1-34.7000110.8
38P97.4Very high96.7Very high124 Ų124120 Ų12081%0.80564%0.639SS**PPolyproline II helixtrans-62.213017725.6-33.4000110.7
39P97.3Very high96.8Very high107 Ų107127.3 Ų127.370%0.69567%0.673SS**PPolyproline II helixtrans-81153.7-18032.4-34.9000112.1L41P39-L41 HydrophobicContact CB-CD2 4.34Å
40K97.7Very high97Very high209 Ų209122.9 Ų122.991%0.90966%0.663SS**  trans-113.295.8165.3-175.7177.2-179.9179.60108.9
41L97.4Very high97.1Very high142 Ų142123.6 Ų123.674%0.74367%0.672SS**PPolyproline II helixtrans-73.4143.4-175.9-61.7178.6000111.6P39P39-L41 HydrophobicContact CB-CD2 4.34Å
42P97.8Very high97.1Very high123 Ų123122.4 Ų122.480%0.79967%0.666SS**PPolyproline II helixtrans-69.1153.8173.430.8-34.9000110.7
43V97.9Very high97.1Very high106 Ų106126 Ų12664%0.64266%0.664SS**PPolyproline II helixtrans-85.2150.7175.1-65.50000111.3H47V43-H47 HydrophobicContact CB-CB 3.79Å; V43-H47 HydrophobicContact CG1-CB 4.44Å; V43-H47 HydrophobicContact CG2-CB 3.85Å
44G97.3Very high97.1Very high35 Ų35123.6 Ų123.636%0.36165%0.651SS.*PPolyproline II helixtrans-73.6169.1176.300000113.6S46 H47G44-S46 PolarHBondContact O-N 3.16Å; G44-H47 PolarHBondContact N-ND1 3.28Å; G44-H47 PolarHBondContact O-N 3.31Å; G44-H47 PolarHBondContact O-ND1 3.08Å; G44-H47 VanDerWaalsContact O-ND1 3.13Å
45P96.4Very high96.9Very high115 Ų115121.7 Ų121.775%0.74765%0.645SS**THydrogen-bonded Turntrans-65.4-18.8-169.226.3-36.2000114.9K48P45-K48 VanDerWaalsContact O-CE 3.24Å; P45-K48 WeakPolarHBondContact O-CE 3.21Å
46S96.4Very high96.8Very high48 Ų48119.4 Ų119.434%0.33663%0.631SS.*THydrogen-bonded Turntrans-91.59.8177.2-60.60000113.6G44 K48 N52G44-S46 PolarHBondContact O-N 3.16Å; S46-K48 PolarHBondContact O-N 2.85Å; S46-K48 VanDerWaalsContact O-N 3.14Å; S46-N52 PolarHBondContact O-ND2 3.34Å
47H96.9Very high96.7Very high135 Ų135118.8 Ų118.863%0.62562%0.624SS**  trans-86.564.2171-68.178.8000110.4V43 G44V43-H47 HydrophobicContact CB-CB 3.79Å; V43-H47 HydrophobicContact CG1-CB 4.44Å; V43-H47 HydrophobicContact CG2-CB 3.85Å; G44-H47 PolarHBondContact N-ND1 3.28Å; G44-H47 PolarHBondContact O-N 3.31Å; G44-H47 PolarHBondContact O-ND1 3.08Å; G44-H47 VanDerWaalsContact O-ND1 3.13Å
48K96.6Very high96.6Very high132 Ų132114.1 Ų114.157%0.57459%0.593SS**  trans-116.6139.6-179.5-64.3176.9179.7177.20110.3P45 S46 N52P45-K48 VanDerWaalsContact O-CE 3.24Å; P45-K48 WeakPolarHBondContact O-CE 3.21Å; S46-K48 PolarHBondContact O-N 2.85Å; S46-K48 VanDerWaalsContact O-N 3.14Å; K48-N52 HydrophobicContact CB-CB 3.89Å; K48-N52 PolarHBondContact O-ND2 3.42Å
49F96.6Very high96.5Very high228 Ų228110.3 Ų110.3100%158%0.576SS**SBendtrans-75.8-27.2179.8-65.9-69.4000114.1
50A96.9Very high96.4Very high66 Ų66113.3 Ų113.355%0.54557%0.574SS.*SBendtrans-138.3162.4-179.300000110.8N52A50-N52 VanDerWaalsContact C-N 3.31Å; A50-N52 PolarHBondContact O-N 3.49Å
51N95.9Very high96.3Very high145 Ų145112.5 Ų112.578%0.77557%0.565SS**SBendtrans53.744.7177.9-58.6-29.2000113.2
52N96.4Very high96.1Very high40 Ų40112.3 Ų112.321%0.21456%0.56CS.*  trans-140.442.8-173.6-176.330.9000112.1S46 K48 A50 R57S46-N52 PolarHBondContact O-ND2 3.34Å; K48-N52 HydrophobicContact CB-CB 3.89Å; K48-N52 PolarHBondContact O-ND2 3.42Å; A50-N52 VanDerWaalsContact C-N 3.31Å; A50-N52 PolarHBondContact O-N 3.49Å; N52-R57 PolarHBondContact OD1-NE 3.46Å; N52-R57 VanDerWaalsContact OD1-NE 3.08Å
53Y96.6Very high95.9Very high153 Ų153110.8 Ų110.860%0.655%0.552SS**  trans-64.9137176.3-63.1-83.4000110.1Y55 T56Y53-Y55 VanDerWaalsContact C-N 3.26Å; Y53-Y55 VanDerWaalsContact CB-CE1 3.45Å; Y53-Y55 HydrophobicContact CD2-CE1 4.42Å; Y53-Y55 HydrophobicContact CG-CD1 4.32Å; Y53-Y55 AromaticContact CG-CE1 3.91Å; Y53-Y55 HydrophobicContact CG-CE1 3.91Å; Y53-Y55 PolarHBondContact O-N 3.49Å; Y53-T56 PolarHBondContact O-N 3.46Å; Y53-T56 PolarHBondContact O-OG1 3.38Å
54Y96.2Very high95.8Very high123 Ų123111.5 Ų111.548%0.48256%0.557SS.*G310 helixtrans-62.2-35.5-177.2-173.9-107.6000112.3T56 R57 D58Y54-T56 PolarHBondContact O-N 2.9Å; Y54-R57 VanDerWaalsContact CD2-NH1 3.3Å; Y54-R57 CarbonylContact O-C 3.57Å; Y54-R57 WeakPolarHBondContact O-CG 3.3Å; Y54-R57 PolarHBondContact O-N 3.45Å; Y54-R57 VanDerWaalsContact O-N 3.1Å; Y54-D58 HydrophobicContact CD1-CB 4.14Å; Y54-D58 HydrophobicContact CE1-CB 3.87Å; Y54-D58 VanDerWaalsContact CE1-CG 3.47Å; Y54-D58 VanDerWaalsContact CE1-OD2 3.26Å; Y54-D58 WeakPolarHBondContact CE1-OD2 3.17Å; Y54-D58 PolarHBondContact O-N 2.76Å; Y54-D58 VanDerWaalsContact O-N 3.11Å
55Y94.8Very high95.6Very high176 Ų176115.6 Ų115.669%0.6958%0.577SS**G310 helixtrans-62.3-26.3-176.184-92000113.7Y53 R57Y53-Y55 VanDerWaalsContact C-N 3.26Å; Y53-Y55 VanDerWaalsContact CB-CE1 3.45Å; Y53-Y55 HydrophobicContact CD2-CE1 4.42Å; Y53-Y55 HydrophobicContact CG-CD1 4.32Å; Y53-Y55 AromaticContact CG-CE1 3.91Å; Y53-Y55 HydrophobicContact CG-CE1 3.91Å; Y53-Y55 PolarHBondContact O-N 3.49Å; Y55-R57 PolarHBondContact O-N 3.02Å
56T95.3Very high95.4Very high80 Ų80114.6 Ų114.649%0.49158%0.579SS.*G310 helixtrans-80.3-5.2-179.863.70000113.3Y53 Y54Y53-T56 PolarHBondContact O-N 3.46Å; Y53-T56 PolarHBondContact O-OG1 3.38Å; Y54-T56 PolarHBondContact O-N 2.9Å
57R95Very high95.1Very high104 Ų104118.3 Ų118.339%0.39260%0.599SS.*G310 helixtrans-138.515.9-177.761.2177.3172.3781.6112.5N52 Y54 Y55 G59N52-R57 PolarHBondContact OD1-NE 3.46Å; N52-R57 VanDerWaalsContact OD1-NE 3.08Å; Y54-R57 VanDerWaalsContact CD2-NH1 3.3Å; Y54-R57 CarbonylContact O-C 3.57Å; Y54-R57 WeakPolarHBondContact O-CG 3.3Å; Y54-R57 PolarHBondContact O-N 3.45Å; Y54-R57 VanDerWaalsContact O-N 3.1Å; Y55-R57 PolarHBondContact O-N 3.02Å; R57-G59 VanDerWaalsContact C-N 3.28Å; R57-G59 PolarHBondContact O-N 2.74Å; R57-G59 VanDerWaalsContact O-N 3.07Å
58D96.2Very high94.6Very high5 Ų5117.2 Ų117.23%0.02760%0.602CS.*  trans-83.175.1178-169.3-2.8000109.4Y54 R60 R61 E62Y54-D58 HydrophobicContact CD1-CB 4.14Å; Y54-D58 HydrophobicContact CE1-CB 3.87Å; Y54-D58 VanDerWaalsContact CE1-CG 3.47Å; Y54-D58 VanDerWaalsContact CE1-OD2 3.26Å; Y54-D58 WeakPolarHBondContact CE1-OD2 3.17Å; Y54-D58 PolarHBondContact O-N 2.76Å; Y54-D58 VanDerWaalsContact O-N 3.11Å; D58-R60 PolarHBondContact O-N 3.18Å; D58-R60 VanDerWaalsContact O-N 3.08Å; D58-R60 WeakPolarHBondContact OD1-CB 3.25Å; D58-R60 PolarHBondContact OD1-N 2.92Å; D58-R60 IonicContact OD1-NE 3.9Å; D58-R60 IonicContact OD2-NH2 3.96Å; D58-R61 HydrophobicContact CB-CB 4.42Å; D58-R61 HydrophobicContact CB-CG 4.49Å; D58-R61 PolarHBondContact O-N 3.34Å; D58-R61 WeakPolarHBondContact OD2-CD 3.44Å; D58-R61 VanDerWaalsContact OD2-CG 3.23Å; D58-R61 WeakPolarHBondContact OD2-CG 3.31Å; D58-R61 IonicContact OD2-NE 2.95Å; D58-R61 PolarHBondContact OD2-NE 3.38Å; D58-E62 PolarHBondContact O-N 3.14Å
59G95.3Very high94.1Very high44 Ų44117.8 Ų117.845%0.45462%0.616SS.*THydrogen-bonded Turntrans-59.7-19.3177.900000113.6R57 R61 E62R57-G59 VanDerWaalsContact C-N 3.28Å; R57-G59 PolarHBondContact O-N 2.74Å; R57-G59 VanDerWaalsContact O-N 3.07Å; G59-R61 VanDerWaalsContact C-N 3.28Å; G59-R61 PolarHBondContact O-N 3.4Å; G59-E62 PolarHBondContact O-N 3.3Å
60R95.7Very high93.4Very high171 Ų171114.7 Ų114.765%0.64561%0.607SS**THydrogen-bonded Turntrans-68.3-27.6172.5177.8-172.760.7171.8-3.2111.8D58 S63D58-R60 PolarHBondContact O-N 3.18Å; D58-R60 VanDerWaalsContact O-N 3.08Å; D58-R60 WeakPolarHBondContact OD1-CB 3.25Å; D58-R60 PolarHBondContact OD1-N 2.92Å; D58-R60 IonicContact OD1-NE 3.9Å; D58-R60 IonicContact OD2-NH2 3.96Å; R60-S63 PolarHBondContact O-OG 3.09Å
61R94.4Very high92.8Very high192 Ų192114.3 Ų114.373%0.72560%0.6SS**THydrogen-bonded Turntrans-89.3-12.9175.3-71.4-179.7-173.2-92.80.9113.6D58 G59D58-R61 HydrophobicContact CB-CB 4.42Å; D58-R61 HydrophobicContact CB-CG 4.49Å; D58-R61 PolarHBondContact O-N 3.34Å; D58-R61 WeakPolarHBondContact OD2-CD 3.44Å; D58-R61 VanDerWaalsContact OD2-CG 3.23Å; D58-R61 WeakPolarHBondContact OD2-CG 3.31Å; D58-R61 IonicContact OD2-NE 2.95Å; D58-R61 PolarHBondContact OD2-NE 3.38Å; G59-R61 VanDerWaalsContact C-N 3.28Å; G59-R61 PolarHBondContact O-N 3.4Å
62E94.5Very high92.1Very high137 Ų137113.4 Ų113.464%0.6461%0.605SS**SBendtrans-76.5-14.2173.6-64.8177.7178.700112.4D58 G59 V64D58-E62 PolarHBondContact O-N 3.14Å; G59-E62 PolarHBondContact O-N 3.3Å; E62-V64 PolarHBondContact O-N 3.06Å
63S93.5Very high91.3Very high91 Ų91119 Ų11964%0.63663%0.63SS**PPolyproline II helixtrans-66.411817466.60000110.6R60R60-S63 PolarHBondContact O-OG 3.09Å
64V94.3Very high89.6Confident122 Ų122121.7 Ų121.774%0.73965%0.645SS**PPolyproline II helixtrans-101.9156.9174.8-62.30000111E62E62-V64 PolarHBondContact O-N 3.06Å
65P94.6Very high88Confident121 Ų121121.7 Ų121.779%0.78666%0.657SS**PPolyproline II helixtrans-54.4151.7170.2-24.634.8000112.1T67P65-T67 PolarHBondContact O-N 3.41Å
66A92.3Very high86.3Confident94 Ų94121.2 Ų121.278%0.77767%0.666SS**PPolyproline II helixtrans-58.5139179.700000111.7V68A66-V68 PolarHBondContact O-N 3.02Å
67T88.5Confident84.6Confident125 Ų125123.3 Ų123.377%0.76768%0.679SS**PPolyproline II helixtrans-73.3121.3174.4-57.30000109.8P65 V69P65-T67 PolarHBondContact O-N 3.41Å; T67-V69 PolarHBondContact O-N 3.48Å
68V86.9Confident82.9Confident112 Ų112123 Ų12368%0.67970%0.698SS**  trans-84.4110.5179.9-177.70000109.5A66 M70A66-V68 PolarHBondContact O-N 3.02Å; V68-M70 WeakPolarHBondContact CG1-O 3.32Å
69V85.4Confident81.1Confident144 Ų144126.8 Ų126.887%0.87374%0.738SS**SBendtrans-82-31.5-178.3-1790000112.2T67T67-V69 PolarHBondContact O-N 3.48Å
70M83.5Confident79.4Confident163 Ų163128.9 Ų128.980%0.80375%0.746SS**  trans-142.8132.3178.8-172-80.5-172.100109.1V68V68-M70 WeakPolarHBondContact CG1-O 3.32Å
71S82.5Confident77.5Confident59 Ų59130.4 Ų130.441%0.41376%0.761SS.*  trans-137.6152.1173.386.20000110Q73S71-Q73 PolarHBondContact O-N 3.28Å; S71-Q73 PolarHBondContact OG-O 3.12Å; S71-Q73 VanDerWaalsContact OG-O 3.04Å
72S81.9Confident75.8Confident125 Ų125127.4 Ų127.487%0.87476%0.763SS**SBendtrans-71.1-17.2177.253.10000113.2
73Q79.7Confident74.3Confident158 Ų158124.6 Ų124.674%0.73876%0.764SS**SBendtrans-83.7124.4175.2-67.4176.7-8.700109.5S71 V75S71-Q73 PolarHBondContact O-N 3.28Å; S71-Q73 PolarHBondContact OG-O 3.12Å; S71-Q73 VanDerWaalsContact OG-O 3.04Å; Q73-V75 PolarHBondContact O-N 3.47Å; Q73-V75 VanDerWaalsContact O-N 3.09Å
74K60.3Low72.8Confident210 Ų210130.8 Ų130.891%0.91378%0.779SS**  trans-71.3102.6178.7-116.8-178.3-179.1-176.10109.5
75V63Low71.5Confident122 Ų122130 Ų13074%0.73978%0.775SS**PPolyproline II helixtrans-80123.7163.9-179.50000107.3Q73 T77Q73-V75 PolarHBondContact O-N 3.47Å; Q73-V75 VanDerWaalsContact O-N 3.09Å; V75-T77 PolarHBondContact O-N 2.93Å
76L60.4Low70.5Confident166 Ų166131.5 Ų131.587%0.86978%0.782SS**PPolyproline II helixtrans-65.2116.9172.5-68.1168000107.9
77T57.7Low70Confident125 Ų125136.3 Ų136.377%0.76779%0.785SS**PPolyproline II helixtrans-60.2136.1168.240.10000109.2V75 G79V75-T77 PolarHBondContact O-N 2.93Å; T77-G79 PolarHBondContact O-N 3.46Å
78A59.4Low69.9Low96 Ų96134.1 Ų134.179%0.79378%0.78SS**PPolyproline II helixtrans-51.6126.8167.400000108.5S80A78-S80 PolarHBondContact O-N 2.96Å
79G58.5Low70Confident85 Ų85135.1 Ų135.188%0.87679%0.789SS**SBendtrans-59.6105.6-164.100000113.3T77T77-G79 PolarHBondContact O-N 3.46Å
80S60.6Low70.3Confident89 Ų89134.8 Ų134.862%0.62279%0.787SS**  trans-154.6124.1155.959.90000108.1A78 V82A78-S80 PolarHBondContact O-N 2.96Å; S80-V82 PolarHBondContact O-N 3.34Å; S80-V82 VanDerWaalsContact O-N 3.13Å
81E55.8Low70.7Confident203 Ų203132.1 Ų132.195%0.94978%0.78SS**  trans-62.2111.7178.2-69.8-176.3153.700110.2
82V59.1Low71.2Confident128 Ų128136.6 Ų136.678%0.77681%0.807SS**  trans-88.9109.9172.5-175.20000107.8S80 K84S80-V82 PolarHBondContact O-N 3.34Å; S80-V82 VanDerWaalsContact O-N 3.13Å; V82-K84 PolarHBondContact O-N 3.42Å
83A61.8Low71.8Confident79 Ų79132.7 Ų132.765%0.65379%0.787SS**  trans-53.7132.8173.100000110.5T85A83-T85 PolarHBondContact O-N 3Å
84K62.3Low72.4Confident221 Ų221131.8 Ų131.896%0.96179%0.792SS**  trans-71.191.1179-72.7179.9-179.6175.20110V82V82-K84 PolarHBondContact O-N 3.42Å
85T66.2Low74Confident105 Ų105127.6 Ų127.664%0.64478%0.784SS**PPolyproline II helixtrans-86.8144.4168.558.50000110.2A83 K87A83-T85 PolarHBondContact O-N 3Å; T85-K87 PolarHBondContact O-N 3.38Å
86T75.4Confident75.5Confident152 Ų152130.1 Ų130.193%0.93378%0.782SS**PPolyproline II helixtrans-62.9118.3170.9250000109.5
87K80Confident77.3Confident195 Ų195130.2 Ų130.285%0.84878%0.778SS**PPolyproline II helixtrans-88132.1177.4-64.2-175.1-179.3-177.80109.7T85T85-K87 PolarHBondContact O-N 3.38Å
88A87.5Confident79.1Confident79 Ų79128.9 Ų128.965%0.65377%0.771SS**PPolyproline II helixtrans-67151.6171.200000111
89P89.1Confident80.7Confident134 Ų134128.8 Ų128.887%0.8776%0.763SS**PPolyproline II helixtrans-62.5140.6170.926.9-33.3000110.5
90V91.1Very high82.5Confident137 Ų137130.7 Ų130.783%0.8376%0.76SS**  trans-113.7143.6-180-66.60000110.7
91T92.6Very high84.1Confident106 Ų106131.9 Ų131.965%0.6576%0.758SS**  trans-102.1149.9169.752.20000110G93T91-G93 WeakPolarHBondContact CB-O 3.34Å; T91-G93 PolarHBondContact O-N 3.01Å; T91-G93 VanDerWaalsContact O-N 3.16Å; T91-G93 PolarHBondContact OG1-O 3.5Å
92P93.7Very high86Confident153 Ų153125.2 Ų125.299%0.99473%0.734SS**SBendtrans-62.4-20.1-179.8-25.234.9000115.2
93G93.4Very high87.8Confident44 Ų44126 Ų12645%0.45474%0.739SS.*SBendtrans-157.6-172.9177.300000110.3T91T91-G93 WeakPolarHBondContact CB-O 3.34Å; T91-G93 PolarHBondContact O-N 3.01Å; T91-G93 VanDerWaalsContact O-N 3.16Å; T91-G93 PolarHBondContact OG1-O 3.5Å
94T93.3Very high89.4Confident138 Ų138129.4 Ų129.485%0.84775%0.747SS**PPolyproline II helixtrans-68.8156.8173.9540000111
95V93.1Very high90.8Very high123 Ų123124.4 Ų124.475%0.74573%0.727SS**PPolyproline II helixtrans-61.9138.1170.6-178.40000108.2E97V95-E97 PolarHBondContact O-N 3.47Å
96Y95.4Very high92.1Very high175 Ų175122 Ų12269%0.68671%0.713SS**PPolyproline II helixtrans-59.2124.9177.2171.4-106000110.7P98 P99Y96-P98 HydrophobicContact CE1-CB 4.02Å; Y96-P99 WeakPolarHBondContact OH-CD 3.35Å
97E96.4Very high92.8Very high168 Ų168123.3 Ų123.379%0.78570%0.702SS**PPolyproline II helixtrans-95.3117.5170.8-66-175.817900108.6V95V95-E97 PolarHBondContact O-N 3.47Å
98P95.3Very high92.8Very high96 Ų96124.5 Ų124.562%0.62372%0.716SS**PPolyproline II helixtrans-64.8138.4177.926.8-32.9000110.3Y96Y96-P98 HydrophobicContact CE1-CB 4.02Å
99P94.7Very high93.1Very high95 Ų95126.8 Ų126.862%0.61772%0.719SS**PPolyproline II helixtrans-62.3147.9177.927-34.5000110.4Y96Y96-P99 WeakPolarHBondContact OH-CD 3.35Å
100P95.3Very high93.3Very high125 Ų125126.4 Ų126.481%0.81271%0.711SS**PPolyproline II helixtrans-66156.5175.629.4-35000110.8
101L95.2Very high93.4Very high113 Ų113125.8 Ų125.859%0.59271%0.705SS**PPolyproline II helixtrans-62.2141173.2-169.564.6000110T103 P106L101-T103 PolarHBondContact O-N 3.27Å; L101-P106 HydrophobicContact CD1-CB 4.42Å; L101-P106 HydrophobicContact CD2-CB 3.68Å; L101-P106 HydrophobicContact CG-CB 3.79Å
102S95.3Very high93.5Very high64 Ų64126.9 Ų126.945%0.44871%0.708SS.*PPolyproline II helixtrans-55.8137.6179.6-177.20000111.5D104 P106S102-D104 PolarHBondContact OG-N 2.84Å; S102-P106 WeakPolarHBondContact O-CB 3.39Å
103T95.8Very high93.5Very high143 Ų143125.3 Ų125.388%0.87769%0.69SS**SBendtrans-87.9-15.3176.452.40000113.5L101L101-T103 PolarHBondContact O-N 3.27Å
104D95.4Very high93.5Very high152 Ų152130.7 Ų130.781%0.81371%0.706SS**SBendtrans-85.4-60-175.7-17023.4000111.3S102S102-D104 PolarHBondContact OG-N 2.84Å
105Q93.4Very high93.5Very high115 Ų115130.2 Ų130.254%0.53770%0.696SS.*  trans-13782174.7-170.3171.92.900109.7Y107 L108Q105-Y107 WeakPolarHBondContact CG-O 3.4Å; Q105-Y107 PolarHBondContact O-N 3.4Å; Q105-L108 PolarHBondContact NE2-OXT 3.03Å
106P92.3Very high93.5Very high54 Ų54130.8 Ų130.835%0.35169%0.692SS.*SBendtrans-65.8-25.7-177.521.8-31.4000113.4L101 S102L101-P106 HydrophobicContact CD1-CB 4.42Å; L101-P106 HydrophobicContact CD2-CB 3.68Å; L101-P106 HydrophobicContact CG-CB 3.79Å; S102-P106 WeakPolarHBondContact O-CB 3.39Å
107Y89.7Confident93.4Very high181 Ų181127.1 Ų127.171%0.7169%0.693SS**  trans-129.8129.6179.2-51.6-68.4000107.6Q105Q105-Y107 WeakPolarHBondContact CG-O 3.4Å; Q105-Y107 PolarHBondContact O-N 3.4Å
108L81.6Confident93.1Very high219 Ų219123.4 Ų123.4100%1.14768%0.684SS**  trans-61.80176.4-77.5166.6000111.1Q105Q105-L108 PolarHBondContact NE2-OXT 3.03Å

Retrieved 108 of 108 residues in 22.9 ms (Link to these results)