A0A2K6DP06_MACNE Loading...

NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

AlphaFold DB , UniProt , Accession A0A2K6DP06, Species MACNE (Macaca nemestrina, Pig-tailed macaque), Gene NDUFC1, Length 76 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M42.1Very low54.7Low247 Ų247120.8 Ų120.8100%1.21770%0.696SS**  0109.20-77.5155.8116.700107.5
2A51.6Low55Low82 Ų82127 Ų12768%0.67870%0.699SS**  trans-77148.8-169.500000112S4A2-S4 VanDerWaalsContact C-N 3.33Å; A2-S4 PolarHBondContact O-N 2.97Å
3P50.9Low55.4Low110 Ų110128.2 Ų128.271%0.71470%0.703SS**  trans-81.277.8-172.434.2-33.5000110.4A5P3-A5 PolarHBondContact O-N 3.47Å
4S55.6Low55.7Low94 Ų94128.6 Ų128.666%0.65770%0.703SS**THydrogen-bonded Turntrans-78.10.1-179.5-59.90000114.4A2A2-S4 VanDerWaalsContact C-N 3.33Å; A2-S4 PolarHBondContact O-N 2.97Å
5A57Low56.3Low87 Ų87124 Ų12472%0.71969%0.688SS**THydrogen-bonded Turntrans-83.5-25-171.800000114.5P3P3-A5 PolarHBondContact O-N 3.47Å
6L54.8Low56.7Low146 Ų146123.4 Ų123.476%0.76469%0.692SS**SBendtrans-92.5-14.5-174.1-72170.3000114.8P9L6-P9 WeakPolarHBondContact O-CD 3.29Å
7L55Low57.2Low124 Ų124121.2 Ų121.265%0.64969%0.693SS**Hα-helixtrans-85.9-18.8-177.2-70.5167.2000113.7S11L7-S11 PolarHBondContact O-N 3.46Å; L7-S11 PolarHBondContact O-OG 2.67Å
8R57.6Low57.6Low188 Ų188127.8 Ų127.871%0.70971%0.705SS**Hα-helixtrans-68.1-35-177.2-134.3179.2-175.4-169.91.1115.6S11R8-S11 PolarHBondContact O-OG 3.3Å
9P59.1Low58Low79 Ų79128.7 Ų128.751%0.51371%0.708SS.*Hα-helixtrans-77-35.5174.326.6-31.4000112.4L6 S11 R12L6-P9 WeakPolarHBondContact O-CD 3.29Å; P9-S11 PolarHBondContact O-N 2.93Å; P9-R12 PolarHBondContact O-N 2.96Å
10L58.2Low58.1Low98 Ų98128.2 Ų128.251%0.51371%0.71SS.*Hα-helixtrans-69.1-34.2-179.2-165.568.7000112.2R12 L13 L14L10-R12 PolarHBondContact O-N 2.75Å; L10-L13 HydrophobicContact CD1-CD1 4.25Å; L10-L13 PolarHBondContact O-N 2.89Å; L10-L13 VanDerWaalsContact O-N 3.09Å; L10-L14 PolarHBondContact O-N 3.44Å
11S59.9Low58.3Low74 Ų74127.9 Ų127.952%0.51772%0.717SS.*Hα-helixtrans-64.6-21175.9640000113.7L7 R8 P9L7-S11 PolarHBondContact O-N 3.46Å; L7-S11 PolarHBondContact O-OG 2.67Å; R8-S11 PolarHBondContact O-OG 3.3Å; P9-S11 PolarHBondContact O-N 2.93Å
12R58.4Low59.1Low195 Ų195119 Ų11974%0.73669%0.689SS**Hα-helixtrans-81.2-27.2172.8-91.4-178.2-122.6-179.2-2.6113.1P9 L10 L14 A15P9-R12 PolarHBondContact O-N 2.96Å; L10-R12 PolarHBondContact O-N 2.75Å; R12-L14 VanDerWaalsContact C-N 3.35Å; R12-A15 VanDerWaalsContact O-CB 3.27Å; R12-A15 WeakPolarHBondContact O-CB 3.41Å; R12-A15 PolarHBondContact O-N 2.95Å
13L59.9Low59.6Low143 Ų143120 Ų12075%0.74969%0.691SS**Hα-helixtrans-74.8-28.1174.5-75164.2000112.1L10 A15L10-L13 HydrophobicContact CD1-CD1 4.25Å; L10-L13 PolarHBondContact O-N 2.89Å; L10-L13 VanDerWaalsContact O-N 3.09Å; L13-A15 VanDerWaalsContact C-N 3.28Å
14L59.8Low60.1Low134 Ų134120.2 Ų120.270%0.70270%0.695SS**THydrogen-bonded Turntrans-88.58.3173.7-62.2172.8000113L10 R12 P16L10-L14 PolarHBondContact O-N 3.44Å; R12-L14 VanDerWaalsContact C-N 3.35Å; L14-P16 WeakPolarHBondContact O-CD 3.37Å
15A64.1Low60.4Low59 Ų59120.1 Ų120.149%0.48870%0.7SS.*SBendtrans-60.3123.9172.900000108.1R12 L13 A17R12-A15 VanDerWaalsContact O-CB 3.27Å; R12-A15 WeakPolarHBondContact O-CB 3.41Å; R12-A15 PolarHBondContact O-N 2.95Å; L13-A15 VanDerWaalsContact C-N 3.28Å; A15-A17 PolarHBondContact O-N 3.32Å
16P63.3Low60.9Low115 Ų115126.5 Ų126.575%0.74771%0.705SS**  trans-58.1112.3180-18.528.6000108L14 R18L14-P16 WeakPolarHBondContact O-CD 3.37Å; P16-R18 VanDerWaalsContact C-N 3.26Å; P16-R18 PolarHBondContact O-N 2.92Å
17A64.9Low62Low85 Ų85125.2 Ų125.270%0.70271%0.709SS**  trans-59.9101.3163.700000105A15 L19A15-A17 PolarHBondContact O-N 3.32Å; A17-L19 PolarHBondContact O-N 3.25Å
18R64.1Low63Low241 Ų241126.3 Ų126.391%0.90971%0.708SS**  trans-6682.8169.5-65.5-173.7-167.6-175.34.1105.4P16P16-R18 VanDerWaalsContact C-N 3.26Å; P16-R18 PolarHBondContact O-N 2.92Å
19L65.2Low64.2Low145 Ų145125.9 Ų125.976%0.75971%0.712SS**  trans-50.2126164.7-70.5168.2000104.9A17 S21A17-L19 PolarHBondContact O-N 3.25Å; L19-S21 PolarHBondContact O-N 3.45Å
20P60.6Low65.6Low117 Ų117128.8 Ų128.876%0.7671%0.713SS**  trans-56.9108.9174.321.5-29.2000106.2G22P20-G22 PolarHBondContact O-N 3.04Å
21S62Low66.9Low123 Ų123131.6 Ų131.686%0.8673%0.734SS**  trans-71.831.9168.865.30000110.1L19 S23L19-S21 PolarHBondContact O-N 3.45Å; S21-S23 VanDerWaalsContact C-N 3.32Å; S21-S23 PolarHBondContact O-N 3.3Å
22G59.4Low68.2Low60 Ų60138.3 Ų138.362%0.61975%0.748SS**  trans-66.1100.6170.100000105.6P20 S24P20-G22 PolarHBondContact O-N 3.04Å; G22-S24 PolarHBondContact O-N 3.27Å
23S62.7Low69.6Low103 Ų103134.6 Ų134.672%0.7274%0.739SS**  trans-37.2115.8154.4152.50000106.3S21 A25S21-S23 VanDerWaalsContact C-N 3.32Å; S21-S23 PolarHBondContact O-N 3.3Å; S23-A25 PolarHBondContact O-N 3.43Å
24S60.1Low71Confident114 Ų114130.6 Ų130.680%0.79772%0.722SS**  trans-5492.4172.9171.40000107.3G22 R26G22-S24 PolarHBondContact O-N 3.27Å; S24-R26 PolarHBondContact O-N 3.23Å
25A62.3Low72.3Confident92 Ų92132.1 Ų132.176%0.7673%0.73SS**  trans-77.381.2-17600000106.2S23 S27S23-A25 PolarHBondContact O-N 3.43Å; A25-S27 PolarHBondContact O-N 3.03Å
26R68.4Low73.5Confident222 Ų222136.2 Ų136.284%0.83874%0.744SS**  trans-53128.5166.7-166174.7-173.2158.91.8106.3S24 K28S24-R26 PolarHBondContact O-N 3.23Å; R26-K28 PolarHBondContact O-N 2.85Å
27S76.8Confident74.8Confident119 Ų119133.3 Ų133.383%0.83273%0.729SS**  trans-44.5112.4173.2176.10000108.7A25A25-S27 PolarHBondContact O-N 3.03Å
28K75.3Confident76Confident146 Ų146136.5 Ų136.564%0.63573%0.727SS**  trans-83.5125.3177.7-74.1-172.4178.8-178.50107.1R26 Y30 E33R26-K28 PolarHBondContact O-N 2.85Å; K28-Y30 VanDerWaalsContact C-N 3.25Å; K28-Y30 PolarHBondContact O-N 3.42Å; K28-E33 IonicContact NZ-OE1 2.71Å; K28-E33 PolarHBondContact NZ-OE1 3.28Å
29F84.1Confident77.4Confident180 Ų180128.6 Ų128.679%0.78971%0.707SS**SBendtrans-61.9-33.4-178.5-177.1-96.8000112.8
30Y87.4Confident78.8Confident140 Ų140126.3 Ų126.355%0.54970%0.696SS.*SBendtrans-104.5138.9177.3-61.4-72.8000111.5K28 R32 P34K28-Y30 VanDerWaalsContact C-N 3.25Å; K28-Y30 PolarHBondContact O-N 3.42Å; Y30-R32 WeakPolarHBondContact CB-O 3.39Å; Y30-R32 PolarHBondContact O-N 3.47Å; Y30-P34 HydrophobicContact CD2-CG 3.91Å; Y30-P34 HydrophobicContact CE2-CG 4.22Å
31V86.1Confident80.5Confident156 Ų156130.1 Ų130.195%0.94570%0.695SS**SBendtrans-62.2-33173.1176.70000111.7
32R87.8Confident82.2Confident215 Ų215130.5 Ų130.581%0.81169%0.687SS**SBendtrans-119.7144.9174.9-66-177.3-179179.50.3109.8Y30 P34Y30-R32 WeakPolarHBondContact CB-O 3.39Å; Y30-R32 PolarHBondContact O-N 3.47Å; R32-P34 WeakPolarHBondContact O-CD 3.41Å
33E86.6Confident84Confident117 Ų117134.3 Ų134.355%0.54769%0.686SS.*  trans-63.2124.4175.7-77.4-175.6179.500109.9K28K28-E33 IonicContact NZ-OE1 2.71Å; K28-E33 PolarHBondContact NZ-OE1 3.28Å
34P89.6Confident85.7Confident59 Ų59131.7 Ų131.738%0.38367%0.666SS.*  trans-65.9148.717623.5-28.5000109.7Y30 R32 N36 A37Y30-P34 HydrophobicContact CD2-CG 3.91Å; Y30-P34 HydrophobicContact CE2-CG 4.22Å; R32-P34 WeakPolarHBondContact O-CD 3.41Å; P34-N36 PolarHBondContact O-N 2.86Å; P34-A37 HydrophobicContact CG-CB 3.83Å; P34-A37 WeakPolarHBondContact O-CB 3.08Å; P34-A37 PolarHBondContact O-N 3.18Å
35L87.7Confident87.5Confident166 Ų166128.4 Ų128.487%0.86965%0.649SS**THydrogen-bonded Turntrans-55.4-32.1-177.8-175.663.7000113
36N88.6Confident89.2Confident146 Ų146129.3 Ų129.378%0.78164%0.641SS**THydrogen-bonded Turntrans-98.615.6180-57.6-41.8000113.2P34 K38P34-N36 PolarHBondContact O-N 2.86Å; N36-K38 PolarHBondContact O-N 3.43Å
37A90.5Very high90.7Very high54 Ų54122.1 Ų122.145%0.44662%0.622SS.*SBendtrans-58.8-31.6178.600000112.5P34P34-A37 HydrophobicContact CG-CB 3.83Å; P34-A37 WeakPolarHBondContact O-CB 3.08Å; P34-A37 PolarHBondContact O-N 3.18Å
38K90.7Very high91.7Very high152 Ų152121.6 Ų121.666%0.66161%0.609SS**SBendtrans-121.9136.9178.5-62.7178.8-173.7170.90108.7N36 N40N36-K38 PolarHBondContact O-N 3.43Å; K38-N40 PolarHBondContact O-N 3Å
39P93.2Very high92.8Very high74 Ų74116.4 Ų116.448%0.48160%0.597SS.*  trans-63.6136.6176.826.6-33.4000109.8W41P39-W41 HydrophobicContact CG-CD2 4.44Å; P39-W41 HydrophobicContact CG-CZ2 3.98Å; P39-W41 PolarHBondContact O-N 2.77Å
40N95.3Very high93.5Very high98 Ų98111.7 Ų111.752%0.52458%0.583SS.*  trans-76.592.6167.8-178.1-24000108.2K38 L42 K43 V44K38-N40 PolarHBondContact O-N 3Å; N40-L42 PolarHBondContact O-N 3.01Å; N40-L42 WeakPolarHBondContact OD1-CB 3.35Å; N40-L42 PolarHBondContact OD1-N 3.35Å; N40-K43 HydrophobicContact CB-CB 3.94Å; N40-K43 WeakPolarHBondContact O-CB 3.33Å; N40-K43 PolarHBondContact O-N 2.91Å; N40-K43 PolarHBondContact OD1-N 3.49Å; N40-V44 WeakPolarHBondContact O-CG2 3.49Å; N40-V44 PolarHBondContact O-N 3.46Å
41W95.8Very high94.1Very high197 Ų197108.3 Ų108.375%0.74658%0.577SS**Hα-helixtrans-58.7-32-176.6-73.8108.7000113.8P39 V44 G45P39-W41 HydrophobicContact CG-CD2 4.44Å; P39-W41 HydrophobicContact CG-CZ2 3.98Å; P39-W41 PolarHBondContact O-N 2.77Å; W41-V44 PolarHBondContact O-N 2.72Å; W41-G45 PolarHBondContact O-N 3.29Å
42L97.6Very high94.7Very high131 Ų131105.2 Ų105.269%0.68656%0.559SS**Hα-helixtrans-63.3-48.2173.1-178.770.7000110.7N40 G45 L46N40-L42 PolarHBondContact O-N 3.01Å; N40-L42 WeakPolarHBondContact OD1-CB 3.35Å; N40-L42 PolarHBondContact OD1-N 3.35Å; L42-G45 PolarHBondContact O-N 2.98Å; L42-L46 HydrophobicContact CG-CD1 4.28Å; L42-L46 WeakPolarHBondContact O-CG 3.21Å; L42-L46 PolarHBondContact O-N 3.29Å
43K97.6Very high95.2Very high139 Ų13999.7 Ų99.760%0.60455%0.548SS*.Hα-helixtrans-62.1-44.4177-173.6177.5179.9179.30111.2N40 L46 T47N40-K43 HydrophobicContact CB-CB 3.94Å; N40-K43 WeakPolarHBondContact O-CB 3.33Å; N40-K43 PolarHBondContact O-N 2.91Å; N40-K43 PolarHBondContact OD1-N 3.49Å; K43-L46 PolarHBondContact O-N 2.86Å; K43-T47 HydrophobicContact CG-CG2 4.43Å; K43-T47 WeakPolarHBondContact O-CG2 3.36Å; K43-T47 PolarHBondContact O-N 2.96Å; K43-T47 PolarHBondContact O-OG1 2.86Å; K43-T47 VanDerWaalsContact O-OG1 3.08Å
44V98.3Very high95.8Very high49 Ų4999.4 Ų99.430%0.29755%0.55SS.*Hα-helixtrans-58.9-49177.5173.30000110.7N40 W41 L46 T47 L48N40-V44 WeakPolarHBondContact O-CG2 3.49Å; N40-V44 PolarHBondContact O-N 3.46Å; W41-V44 PolarHBondContact O-N 2.72Å; V44-L46 PolarHBondContact O-N 3.46Å; V44-T47 WeakPolarHBondContact CA-OG1 3.49Å; V44-T47 PolarHBondContact O-N 2.93Å; V44-T47 PolarHBondContact O-OG1 3.43Å; V44-L48 HydrophobicContact CG1-CD1 3.98Å; V44-L48 HydrophobicContact CG1-CG 4.46Å; V44-L48 WeakPolarHBondContact O-CG 3.38Å; V44-L48 PolarHBondContact O-N 3.44Å
45G98.4Very high96.2Very high44 Ų44104 Ų10445%0.45456%0.56SS.*Hα-helixtrans-58.3-47.3177.500000112.7W41 L42 T47 L48 G49W41-G45 PolarHBondContact O-N 3.29Å; L42-G45 PolarHBondContact O-N 2.98Å; G45-T47 PolarHBondContact O-N 3.24Å; G45-L48 PolarHBondContact O-N 3.01Å; G45-G49 PolarHBondContact O-N 3.3Å
46L98.7Very high96.8Very high112 Ų112100.5 Ų100.559%0.58655%0.545SS*.Hα-helixtrans-62.1-42.4176.9-71.9171.6000112.4L42 K43 V44 T50L42-L46 HydrophobicContact CG-CD1 4.28Å; L42-L46 WeakPolarHBondContact O-CG 3.21Å; L42-L46 PolarHBondContact O-N 3.29Å; K43-L46 PolarHBondContact O-N 2.86Å; V44-L46 PolarHBondContact O-N 3.46Å; L46-T50 WeakPolarHBondContact O-CB 3.35Å; L46-T50 PolarHBondContact O-N 3.31Å; L46-T50 PolarHBondContact O-OG1 3.43Å
47T98.7Very high97.2Very high70 Ų70100.7 Ų100.743%0.42954%0.536SS..Hα-helixtrans-62.9-50178.450.20000111.8K43 V44 G45 G49 T50 T51K43-T47 HydrophobicContact CG-CG2 4.43Å; K43-T47 WeakPolarHBondContact O-CG2 3.36Å; K43-T47 PolarHBondContact O-N 2.96Å; K43-T47 PolarHBondContact O-OG1 2.86Å; K43-T47 VanDerWaalsContact O-OG1 3.08Å; V44-T47 WeakPolarHBondContact CA-OG1 3.49Å; V44-T47 PolarHBondContact O-N 2.93Å; V44-T47 PolarHBondContact O-OG1 3.43Å; G45-T47 PolarHBondContact O-N 3.24Å; T47-G49 PolarHBondContact O-N 3.42Å; T47-T50 PolarHBondContact O-N 3.47Å; T47-T51 WeakPolarHBondContact O-CB 3.47Å; T47-T51 PolarHBondContact O-N 3.48Å; T47-T51 PolarHBondContact O-OG1 2.93Å
48L98.7Very high97.6Very high109 Ų109102.7 Ų102.757%0.57154%0.539SS*.Hα-helixtrans-65-43-179.8-66.1177.4000111.5V44 G45 T50 T51 V52V44-L48 HydrophobicContact CG1-CD1 3.98Å; V44-L48 HydrophobicContact CG1-CG 4.46Å; V44-L48 WeakPolarHBondContact O-CG 3.38Å; V44-L48 PolarHBondContact O-N 3.44Å; G45-L48 PolarHBondContact O-N 3.01Å; L48-T50 PolarHBondContact O-N 2.97Å; L48-T51 PolarHBondContact O-N 3.38Å; L48-V52 WeakPolarHBondContact O-CG2 3.3Å; L48-V52 PolarHBondContact O-N 2.89Å
49G98.6Very high98Very high37 Ų3799.9 Ų99.938%0.38153%0.53SS..Hα-helixtrans-59.3-46.8176.200000112.2G45 T47 T51 V52 V53G45-G49 PolarHBondContact O-N 3.3Å; T47-G49 PolarHBondContact O-N 3.42Å; G49-T51 PolarHBondContact O-N 3.49Å; G49-V52 PolarHBondContact O-N 2.92Å; G49-V53 WeakPolarHBondContact O-CG2 3.42Å; G49-V53 PolarHBondContact O-N 3.34Å
50T98.8Very high98.3Very high81 Ų81102.2 Ų102.250%0.49753%0.533SS..Hα-helixtrans-63-43.3177.8-52.40000111.3L46 T47 L48 V52 V53 L54L46-T50 WeakPolarHBondContact O-CB 3.35Å; L46-T50 PolarHBondContact O-N 3.31Å; L46-T50 PolarHBondContact O-OG1 3.43Å; T47-T50 PolarHBondContact O-N 3.47Å; L48-T50 PolarHBondContact O-N 2.97Å; T50-V52 PolarHBondContact O-N 3.5Å; T50-V53 PolarHBondContact O-N 3.32Å; T50-L54 HydrophobicContact CG2-CD1 4.22Å; T50-L54 WeakPolarHBondContact O-CG 3.36Å; T50-L54 PolarHBondContact O-N 3.48Å
51T98.8Very high98.4Very high69 Ų69100.5 Ų100.542%0.42352%0.522SS..Hα-helixtrans-59.7-46.7176.2-61.80000111.6T47 L48 G49 V53 L54 W55T47-T51 WeakPolarHBondContact O-CB 3.47Å; T47-T51 PolarHBondContact O-N 3.48Å; T47-T51 PolarHBondContact O-OG1 2.93Å; L48-T51 PolarHBondContact O-N 3.38Å; G49-T51 PolarHBondContact O-N 3.49Å; T51-V53 PolarHBondContact O-N 2.96Å; T51-L54 PolarHBondContact O-N 3.34Å; T51-W55 PolarHBondContact O-N 3.31Å
52V98.8Very high98.6Very high91 Ų9196.2 Ų96.255%0.55251%0.509SS*.Hα-helixtrans-61.3-45.2177.7170.70000111.3L48 G49 T50 L54 W55 V56L48-V52 WeakPolarHBondContact O-CG2 3.3Å; L48-V52 PolarHBondContact O-N 2.89Å; G49-V52 PolarHBondContact O-N 2.92Å; T50-V52 PolarHBondContact O-N 3.5Å; V52-L54 VanDerWaalsContact C-N 3.34Å; V52-L54 PolarHBondContact O-N 3.31Å; V52-W55 PolarHBondContact O-N 2.92Å; V52-V56 HydrophobicContact CG1-CG2 4.34Å; V52-V56 WeakPolarHBondContact O-CG2 3.33Å; V52-V56 PolarHBondContact O-N 3.47Å
53V98.8Very high98.6Very high99 Ų9993.9 Ų93.960%0.650%0.498SS*.Hα-helixtrans-58.7-46.1177.4168.80000111.2G49 T50 T51 W55 V56 Y57G49-V53 WeakPolarHBondContact O-CG2 3.42Å; G49-V53 PolarHBondContact O-N 3.34Å; T50-V53 PolarHBondContact O-N 3.32Å; T51-V53 PolarHBondContact O-N 2.96Å; V53-W55 PolarHBondContact O-N 3.49Å; V53-V56 PolarHBondContact O-N 2.91Å; V53-Y57 WeakPolarHBondContact O-CB 3.35Å; V53-Y57 PolarHBondContact O-N 2.92Å
54L98.8Very high98.6Very high111 Ų11191.5 Ų91.558%0.58149%0.489SS*.Hα-helixtrans-61.4-42.9177.5-73.2171.7000112T50 T51 V52 Y57 L58T50-L54 HydrophobicContact CG2-CD1 4.22Å; T50-L54 WeakPolarHBondContact O-CG 3.36Å; T50-L54 PolarHBondContact O-N 3.48Å; T51-L54 PolarHBondContact O-N 3.34Å; V52-L54 VanDerWaalsContact C-N 3.34Å; V52-L54 PolarHBondContact O-N 3.31Å; L54-Y57 PolarHBondContact O-N 3Å; L54-L58 VanDerWaalsContact O-CB 3.26Å; L54-L58 WeakPolarHBondContact O-CB 3.47Å; L54-L58 PolarHBondContact O-N 3.48Å
55W98.8Very high98.7Very high154 Ų15493.2 Ų93.258%0.58350%0.496SS*.Hα-helixtrans-65.4-44.6178.2-85.7108.9000112.9T51 V52 V53 Y57 L58 I59T51-W55 PolarHBondContact O-N 3.31Å; V52-W55 PolarHBondContact O-N 2.92Å; V53-W55 PolarHBondContact O-N 3.49Å; W55-Y57 VanDerWaalsContact C-N 3.31Å; W55-Y57 PolarHBondContact O-N 3.36Å; W55-L58 HydrophobicContact CE3-CD2 4.18Å; W55-L58 HydrophobicContact CZ3-CD2 4.1Å; W55-L58 PolarHBondContact O-N 3.48Å; W55-I59 VanDerWaalsContact O-CG1 3.3Å; W55-I59 WeakPolarHBondContact O-CG1 3.27Å; W55-I59 PolarHBondContact O-N 2.98Å
56V98.8Very high98.6Very high94 Ų9494.1 Ų94.157%0.5749%0.49SS*.Hα-helixtrans-60.8-45176.5170.60000110.3V52 V53 I59 K60V52-V56 HydrophobicContact CG1-CG2 4.34Å; V52-V56 WeakPolarHBondContact O-CG2 3.33Å; V52-V56 PolarHBondContact O-N 3.47Å; V53-V56 PolarHBondContact O-N 2.91Å; V56-I59 PolarHBondContact O-N 3.46Å; V56-K60 WeakPolarHBondContact O-CB 3.35Å; V56-K60 PolarHBondContact O-N 2.9Å
57Y98.7Very high98.6Very high149 Ų14994 Ų9458%0.58449%0.489SS*.Hα-helixtrans-61.6-45.2176.9-175.7-98.8000111.8V53 L54 W55 I59 K60 Q61V53-Y57 WeakPolarHBondContact O-CB 3.35Å; V53-Y57 PolarHBondContact O-N 2.92Å; L54-Y57 PolarHBondContact O-N 3Å; W55-Y57 VanDerWaalsContact C-N 3.31Å; W55-Y57 PolarHBondContact O-N 3.36Å; Y57-I59 PolarHBondContact O-N 3.45Å; Y57-K60 PolarHBondContact O-N 3.38Å; Y57-Q61 WeakPolarHBondContact O-CB 3.38Å; Y57-Q61 PolarHBondContact O-N 2.69Å
58L98.8Very high98.5Very high97 Ų9793.1 Ų93.151%0.50848%0.48SS..Hα-helixtrans-62.8-43.9179.9-174.868.4000112.2L54 W55 K60 Q61 H62L54-L58 VanDerWaalsContact O-CB 3.26Å; L54-L58 WeakPolarHBondContact O-CB 3.47Å; L54-L58 PolarHBondContact O-N 3.48Å; W55-L58 HydrophobicContact CE3-CD2 4.18Å; W55-L58 HydrophobicContact CZ3-CD2 4.1Å; W55-L58 PolarHBondContact O-N 3.48Å; L58-K60 VanDerWaalsContact C-N 3.34Å; L58-Q61 PolarHBondContact O-N 3.18Å; L58-H62 VanDerWaalsContact O-CB 3.27Å; L58-H62 WeakPolarHBondContact O-CB 3.38Å; L58-H62 PolarHBondContact O-N 3.41Å
59I98.7Very high98.5Very high93 Ų9394.2 Ų94.248%0.47748%0.478SS..Hα-helixtrans-65-42.1177.8-68.3165.5000110.3W55 V56 Y57 H62 N63W55-I59 VanDerWaalsContact O-CG1 3.3Å; W55-I59 WeakPolarHBondContact O-CG1 3.27Å; W55-I59 PolarHBondContact O-N 2.98Å; V56-I59 PolarHBondContact O-N 3.46Å; Y57-I59 PolarHBondContact O-N 3.45Å; I59-H62 PolarHBondContact O-N 3.24Å; I59-N63 VanDerWaalsContact O-CG 3.27Å; I59-N63 PolarHBondContact O-N 3.22Å; I59-N63 PolarHBondContact O-ND2 3.09Å
60K98.7Very high98.5Very high122 Ų12296.7 Ų96.753%0.5348%0.478SS..Hα-helixtrans-59.9-50.7176.3-174.4-174.2173-162.20110.7V56 Y57 L58 H62 N63 E64V56-K60 WeakPolarHBondContact O-CB 3.35Å; V56-K60 PolarHBondContact O-N 2.9Å; Y57-K60 PolarHBondContact O-N 3.38Å; L58-K60 VanDerWaalsContact C-N 3.34Å; K60-H62 VanDerWaalsContact C-N 3.33Å; K60-H62 PolarHBondContact O-N 2.93Å; K60-N63 PolarHBondContact O-N 3.36Å; K60-E64 WeakPolarHBondContact CE-OE1 3.37Å; K60-E64 IonicContact NZ-OE1 2.72Å; K60-E64 WeakPolarHBondContact O-CG 3.26Å; K60-E64 PolarHBondContact O-N 3.48Å
61Q98.7Very high98.4Very high63 Ų63100.4 Ų100.429%0.29448%0.483SS..Hα-helixtrans-57.3-47.2177.4-174.865.236.300111.2Y57 L58 N63 E64 D65Y57-Q61 WeakPolarHBondContact O-CB 3.38Å; Y57-Q61 PolarHBondContact O-N 2.69Å; L58-Q61 PolarHBondContact O-N 3.18Å; Q61-N63 VanDerWaalsContact C-N 3.31Å; Q61-N63 PolarHBondContact O-N 3.48Å; Q61-E64 PolarHBondContact O-N 2.99Å; Q61-D65 PolarHBondContact NE2-OD1 2.89Å; Q61-D65 WeakPolarHBondContact O-CB 3.33Å; Q61-D65 PolarHBondContact O-N 3.01Å
62H98.6Very high98.3Very high106 Ų106106.1 Ų106.149%0.49150%0.497SS..Hα-helixtrans-57.9-42.5178.8177.365.9000112.8L58 I59 K60 D65 I66L58-H62 VanDerWaalsContact O-CB 3.27Å; L58-H62 WeakPolarHBondContact O-CB 3.38Å; L58-H62 PolarHBondContact O-N 3.41Å; I59-H62 PolarHBondContact O-N 3.24Å; K60-H62 VanDerWaalsContact C-N 3.33Å; K60-H62 PolarHBondContact O-N 2.93Å; H62-D65 PolarHBondContact O-N 2.95Å; H62-I66 VanDerWaalsContact CE1-CD1 3.47Å; H62-I66 WeakPolarHBondContact CE1-CD1 3.44Å; H62-I66 WeakPolarHBondContact NE2-CD1 3.45Å; H62-I66 WeakPolarHBondContact O-CG1 3.49Å; H62-I66 PolarHBondContact O-N 3.24Å
63N98.4Very high98.3Very high83 Ų83106 Ų10644%0.44449%0.493SS..Hα-helixtrans-66.5-42.7177.3-69.4-25.1000111.7I59 K60 Q61 D65 I66 L67I59-N63 VanDerWaalsContact O-CG 3.27Å; I59-N63 PolarHBondContact O-N 3.22Å; I59-N63 PolarHBondContact O-ND2 3.09Å; K60-N63 PolarHBondContact O-N 3.36Å; Q61-N63 VanDerWaalsContact C-N 3.31Å; Q61-N63 PolarHBondContact O-N 3.48Å; N63-D65 VanDerWaalsContact C-N 3.33Å; N63-I66 PolarHBondContact O-N 3.25Å; N63-L67 VanDerWaalsContact O-CG 3.29Å; N63-L67 WeakPolarHBondContact O-CG 3.45Å; N63-L67 PolarHBondContact O-N 3.04Å
64E98.4Very high98Very high88 Ų88104.3 Ų104.341%0.41150%0.496SS..Hα-helixtrans-60.8-43.2174.9-71.717817800111.3K60 Q61 I66 L67 E68K60-E64 WeakPolarHBondContact CE-OE1 3.37Å; K60-E64 IonicContact NZ-OE1 2.72Å; K60-E64 WeakPolarHBondContact O-CG 3.26Å; K60-E64 PolarHBondContact O-N 3.48Å; Q61-E64 PolarHBondContact O-N 2.99Å; E64-I66 PolarHBondContact O-N 2.73Å; E64-L67 PolarHBondContact O-N 3.25Å; E64-E68 WeakPolarHBondContact O-CB 3.44Å; E64-E68 PolarHBondContact O-N 3.08Å
65D98.4Very high97.7Very high85 Ų85103.7 Ų103.746%0.45549%0.493SS..Hα-helixtrans-63.8-40.5177.9-66.2-18.6000111.7Q61 H62 N63 E68 Y69Q61-D65 PolarHBondContact NE2-OD1 2.89Å; Q61-D65 WeakPolarHBondContact O-CB 3.33Å; Q61-D65 PolarHBondContact O-N 3.01Å; H62-D65 PolarHBondContact O-N 2.95Å; N63-D65 VanDerWaalsContact C-N 3.33Å; D65-E68 PolarHBondContact O-N 2.91Å; D65-Y69 WeakPolarHBondContact O-CB 3.42Å; D65-Y69 PolarHBondContact O-N 3.44Å
66I98.2Very high96.6Very high64 Ų64106.3 Ų106.333%0.32851%0.512SS..Hα-helixtrans-64.8-44.8174.8-73.4170.8000111.1H62 N63 E64 E68 Y69 K70H62-I66 VanDerWaalsContact CE1-CD1 3.47Å; H62-I66 WeakPolarHBondContact CE1-CD1 3.44Å; H62-I66 WeakPolarHBondContact NE2-CD1 3.45Å; H62-I66 WeakPolarHBondContact O-CG1 3.49Å; H62-I66 PolarHBondContact O-N 3.24Å; N63-I66 PolarHBondContact O-N 3.25Å; E64-I66 PolarHBondContact O-N 2.73Å; I66-E68 VanDerWaalsContact C-N 3.3Å; I66-E68 PolarHBondContact O-N 3.41Å; I66-Y69 PolarHBondContact O-N 3.06Å; I66-K70 HydrophobicContact CG2-CD 4.29Å; I66-K70 WeakPolarHBondContact O-CG 3.34Å; I66-K70 PolarHBondContact O-N 2.95Å
67L97.7Very high96.5Very high108 Ų108106.9 Ų106.957%0.56551%0.509SS*.Hα-helixtrans-61.6-44178.2-72.8172.8000110.5N63 E64 Y69 K70 R71N63-L67 VanDerWaalsContact O-CG 3.29Å; N63-L67 WeakPolarHBondContact O-CG 3.45Å; N63-L67 PolarHBondContact O-N 3.04Å; E64-L67 PolarHBondContact O-N 3.25Å; L67-Y69 VanDerWaalsContact C-N 3.34Å; L67-Y69 PolarHBondContact O-N 3.01Å; L67-K70 PolarHBondContact O-N 3.24Å; L67-R71 WeakPolarHBondContact O-CB 3.16Å; L67-R71 PolarHBondContact O-N 2.83Å
68E97.7Very high96.3Very high52 Ų52104.7 Ų104.724%0.24351%0.505CS..Hα-helixtrans-62.3-42.4177.1-176.161.4-17300112.2E64 D65 I66 R71 R72E64-E68 WeakPolarHBondContact O-CB 3.44Å; E64-E68 PolarHBondContact O-N 3.08Å; D65-E68 PolarHBondContact O-N 2.91Å; I66-E68 VanDerWaalsContact C-N 3.3Å; I66-E68 PolarHBondContact O-N 3.41Å; E68-R71 PolarHBondContact O-N 3.06Å; E68-R71 IonicContact OE1-CZ 3.67Å; E68-R71 IonicContact OE1-NE 3.82Å; E68-R71 IonicContact OE1-NH2 2.75Å; E68-R71 PolarHBondContact OE1-NH2 2.96Å; E68-R71 IonicContact OE2-CZ 2.99Å; E68-R71 IonicContact OE2-NE 2.89Å; E68-R71 PolarHBondContact OE2-NE 2.84Å; E68-R71 IonicContact OE2-NH2 2.67Å; E68-R71 PolarHBondContact OE2-NH2 3.24Å; E68-R72 WeakPolarHBondContact O-CG 3.27Å; E68-R72 PolarHBondContact O-N 2.91Å; E68-R72 IonicContact OE1-CZ 3.73Å; E68-R72 IonicContact OE1-NE 2.77Å; E68-R72 PolarHBondContact OE1-NE 2.9Å; E68-R72 IonicContact OE1-NH2 3.16Å; E68-R72 PolarHBondContact OE1-NH2 3.07Å
69Y97.9Very high96.2Very high132 Ų132105.1 Ų105.152%0.51850%0.504SS..Hα-helixtrans-59.6-49.1174.9172.7-98.5000111.7D65 I66 L67 R71 R72 N73 L75D65-Y69 WeakPolarHBondContact O-CB 3.42Å; D65-Y69 PolarHBondContact O-N 3.44Å; I66-Y69 PolarHBondContact O-N 3.06Å; L67-Y69 VanDerWaalsContact C-N 3.34Å; L67-Y69 PolarHBondContact O-N 3.01Å; Y69-R71 VanDerWaalsContact C-N 3.34Å; Y69-R71 PolarHBondContact O-N 2.8Å; Y69-R72 PolarHBondContact O-N 2.81Å; Y69-N73 WeakPolarHBondContact CE2-ND2 3.15Å; Y69-N73 WeakPolarHBondContact O-CB 3.42Å; Y69-N73 PolarHBondContact O-N 2.66Å; Y69-N73 PolarHBondContact O-OD1 2.72Å; Y69-L75 HydrophobicContact CD1-CD1 4.42Å; Y69-L75 HydrophobicContact CE1-CD1 3.66Å
70K97.8Very high96.1Very high90 Ų90105.8 Ų105.839%0.39151%0.506SS..Hα-helixtrans-61.1-43.9178.7-72-179.3178.1-172.20111.8I66 L67 R72 N73 G74 L75 E76I66-K70 HydrophobicContact CG2-CD 4.29Å; I66-K70 WeakPolarHBondContact O-CG 3.34Å; I66-K70 PolarHBondContact O-N 2.95Å; L67-K70 PolarHBondContact O-N 3.24Å; K70-R72 PolarHBondContact O-N 2.71Å; K70-N73 CarbonylContact O-C 3.58Å; K70-N73 PolarHBondContact O-N 3.27Å; K70-G74 PolarHBondContact O-N 2.93Å; K70-L75 HydrophobicContact CB-CB 4.31Å; K70-L75 HydrophobicContact CG-CB 4.26Å; K70-L75 PolarHBondContact O-N 3.4Å; K70-E76 HydrophobicContact CB-CG 4.48Å
71R97.3Very high95.9Very high159 Ų159104.8 Ų104.860%0.651%0.505SS*.Hα-helixtrans-58.6-44.4177-175.8178.372.7147.86.9112.2L67 E68 Y69 N73L67-R71 WeakPolarHBondContact O-CB 3.16Å; L67-R71 PolarHBondContact O-N 2.83Å; E68-R71 PolarHBondContact O-N 3.06Å; E68-R71 IonicContact OE1-CZ 3.67Å; E68-R71 IonicContact OE1-NE 3.82Å; E68-R71 IonicContact OE1-NH2 2.75Å; E68-R71 PolarHBondContact OE1-NH2 2.96Å; E68-R71 IonicContact OE2-CZ 2.99Å; E68-R71 IonicContact OE2-NE 2.89Å; E68-R71 PolarHBondContact OE2-NE 2.84Å; E68-R71 IonicContact OE2-NH2 2.67Å; E68-R71 PolarHBondContact OE2-NH2 3.24Å; Y69-R71 VanDerWaalsContact C-N 3.34Å; Y69-R71 PolarHBondContact O-N 2.8Å; R71-N73 VanDerWaalsContact C-N 3.33Å
72R97.4Very high95.7Very high189 Ų189107.6 Ų107.671%0.71352%0.519SS*.Hα-helixtrans-71.7-27.7-180-71.7-179-174-170.16.6113.4E68 Y69 K70E68-R72 WeakPolarHBondContact O-CG 3.27Å; E68-R72 PolarHBondContact O-N 2.91Å; E68-R72 IonicContact OE1-CZ 3.73Å; E68-R72 IonicContact OE1-NE 2.77Å; E68-R72 PolarHBondContact OE1-NE 2.9Å; E68-R72 IonicContact OE1-NH2 3.16Å; E68-R72 PolarHBondContact OE1-NH2 3.07Å; Y69-R72 PolarHBondContact O-N 2.81Å; K70-R72 PolarHBondContact O-N 2.71Å
73N97.5Very high95.5Very high87 Ų87107.7 Ų107.747%0.46552%0.521SS..Hα-helixtrans-100.4-0.8-176.7-70.443.6000113.1Y69 K70 R71 L75Y69-N73 WeakPolarHBondContact CE2-ND2 3.15Å; Y69-N73 WeakPolarHBondContact O-CB 3.42Å; Y69-N73 PolarHBondContact O-N 2.66Å; Y69-N73 PolarHBondContact O-OD1 2.72Å; K70-N73 CarbonylContact O-C 3.58Å; K70-N73 PolarHBondContact O-N 3.27Å; R71-N73 VanDerWaalsContact C-N 3.33Å; N73-L75 VanDerWaalsContact C-N 3.32Å; N73-L75 HydrophobicContact CB-CD1 3.72Å; N73-L75 HydrophobicContact CB-CG 3.73Å; N73-L75 PolarHBondContact O-N 3.34Å
74G93.8Very high95.3Very high65 Ų65109.6 Ų109.667%0.6753%0.526SS*.THydrogen-bonded Turntrans64.633.3-178.300000113.4K70K70-G74 PolarHBondContact O-N 2.93Å
75L92.1Very high95Very high97 Ų97111.4 Ų111.451%0.50854%0.536SS..  trans-99.127.1-175.8-57.1173.9000112.8Y69 K70 N73Y69-L75 HydrophobicContact CD1-CD1 4.42Å; Y69-L75 HydrophobicContact CE1-CD1 3.66Å; K70-L75 HydrophobicContact CB-CB 4.31Å; K70-L75 HydrophobicContact CG-CB 4.26Å; K70-L75 PolarHBondContact O-N 3.4Å; N73-L75 VanDerWaalsContact C-N 3.32Å; N73-L75 HydrophobicContact CB-CD1 3.72Å; N73-L75 HydrophobicContact CB-CG 3.73Å; N73-L75 PolarHBondContact O-N 3.34Å
76E74.8Confident94.7Very high209 Ų209113.8 Ų113.898%0.97754%0.544SS*.  trans-85.20176.7-72.7-172.5172.600112.8K70K70-E76 HydrophobicContact CB-CG 4.48Å

Retrieved 76 of 76 residues in 13.3 ms (Link to these results)