A0A3P9QEH4_POERE Loading...

Ubiquitin-like protein NEDD8

Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis via its conjugation to a limited number of cellular proteins, such as cullins or p53/TP53. Attachment of NEDD8 to cullins is critical for the recruitment of E2 to the cullin-RING-based E3 ubiquitin-protein ligase complex, thus facilitating polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins. Attachment of NEDD8 to p53/TP53 inhibits p53/TP53 transcriptional activity. Covalent attachment to its substrates requires prior activation by the E1 complex UBE1C-APPBP1 and linkage to the E2 enzyme UBE2M.

AlphaFold DB , UniProt , Accession A0A3P9QEH4, Species POERE (Poecilia reticulata, Guppy), Gene n/a, Length 90 aa.

Structure Viewer
Loading PAE data...
(Predicted Aligned Error values between residue pairs)
Error loading PAE data: please refresh the page.

Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M87.9Confident88.7Confident56 Ų5661.2 Ų61.228%0.27633%0.328SS..  0133.5067.3167.1-178.700108.3I3 D16 I17 P19 A56 I61M1-I3 HydrophobicContact CE-CG2 4.47Å; M1-D16 VanDerWaalsContact C-OD2 3.25Å; M1-D16 PolarHBondContact N-OD2 3.31Å; M1-I17 WeakPolarHBondContact CA-O 3.44Å; M1-I17 HydrophobicContact CE-CD1 3.65Å; M1-I17 HydrophobicContact CE-CG1 4.04Å; M1-I17 HydrophobicContact CG-CG1 4.19Å; M1-I17 WeakPolarHBondContact CG-O 3.49Å; M1-I17 PolarHBondContact N-O 2.76Å; M1-I17 PolarHBondContact O-N 2.8Å; M1-P19 HydrophobicContact CE-CB 4.12Å; M1-P19 HydrophobicContact SD-CB 4.42Å; M1-A56 HydrophobicContact CE-CB 3.92Å; M1-I61 HydrophobicContact CE-CB 4.32Å; M1-I61 HydrophobicContact CE-CG2 3.89Å
2L89.7Confident89Confident81 Ų8165.2 Ų65.242%0.42434%0.343SS..EExtended strand (participates in β ladder)trans-88.2126.9-174.4-161.473.9000110.8E14 D16 G63 G64L2-E14 HydrophobicContact CD1-CB 4.1Å; L2-E14 HydrophobicContact CD2-CB 4.23Å; L2-E14 HydrophobicContact CD2-CG 4.44Å; L2-E14 WeakPolarHBondContact CD2-OE1 3.46Å; L2-E14 HydrophobicContact CG-CB 4.2Å; L2-D16 HydrophobicContact CD1-CB 4.4Å; L2-G63 CarbonylContact O-C 3.46Å; L2-G63 VanDerWaalsContact O-CA 3.26Å; L2-G63 WeakPolarHBondContact O-CA 3.49Å; L2-G64 PolarHBondContact O-N 2.73Å
3I92.3Very high89.2Confident0 Ų061.2 Ų61.20%032%0.323CS..EExtended strand (participates in β ladder)trans-125.6154.1175.465.498.2000110.3M1 V5 E14 I15 I17 I61 L67M1-I3 HydrophobicContact CE-CG2 4.47Å; I3-V5 HydrophobicContact CD1-CG2 3.49Å; I3-V5 VanDerWaalsContact CD1-CG2 3.49Å; I3-E14 WeakPolarHBondContact O-CA 3.49Å; I3-I15 HydrophobicContact CD1-CD1 3.77Å; I3-I15 HydrophobicContact CD1-CG1 3.56Å; I3-I15 HydrophobicContact CG1-CD1 4.25Å; I3-I15 HydrophobicContact CG1-CG1 3.71Å; I3-I15 PolarHBondContact N-O 3.27Å; I3-I15 PolarHBondContact O-N 2.93Å; I3-I17 HydrophobicContact CG1-CD1 3.97Å; I3-I17 HydrophobicContact CG1-CG1 3.87Å; I3-I17 HydrophobicContact CG2-CD1 4.26Å; I3-I17 HydrophobicContact CG2-CG1 4.22Å; I3-I61 HydrophobicContact CG2-CG2 3.73Å; I3-L67 HydrophobicContact CB-CD1 4.47Å; I3-L67 HydrophobicContact CD1-CD1 3.9Å; I3-L67 HydrophobicContact CD1-CD2 4.32Å
4K93.2Very high89.5Confident79 Ų7964.6 Ų64.634%0.34334%0.336SS..EExtended strand (participates in β ladder)trans-101.7128.2179.9-62.9-178.6-179.1-176.20109.2I13 E14 S65 V66 L67K4-I13 CarbonylContact C-O 3.58Å; K4-I13 WeakPolarHBondContact CA-O 3.31Å; K4-E14 HydrophobicContact CG-CG 4.3Å; K4-S65 PolarHBondContact N-O 2.92Å; K4-V66 HydrophobicContact CB-CG2 4.16Å; K4-V66 HydrophobicContact CD-CG2 4.33Å; K4-V66 CarbonylContact O-C 3.59Å; K4-V66 VanDerWaalsContact O-CA 3.31Å; K4-V66 WeakPolarHBondContact O-CA 3.14Å; K4-L67 PolarHBondContact O-N 2.71Å
5V92.1Very high89.6Confident0 Ų060.8 Ų60.80%032%0.316CS..EExtended strand (participates in β ladder)trans-109.9116.7171.1-1740000107.9I3 E12 I13 I15 V30 L43 L67 L69I3-V5 HydrophobicContact CD1-CG2 3.49Å; I3-V5 VanDerWaalsContact CD1-CG2 3.49Å; V5-E12 WeakPolarHBondContact O-CA 3.42Å; V5-I13 HydrophobicContact CB-CD1 4.23Å; V5-I13 HydrophobicContact CB-CG1 3.76Å; V5-I13 PolarHBondContact N-O 2.88Å; V5-I13 WeakPolarHBondContact O-CG1 3.47Å; V5-I13 PolarHBondContact O-N 2.78Å; V5-I15 HydrophobicContact CG2-CD1 4.02Å; V5-I15 HydrophobicContact CG2-CG1 4.26Å; V5-V30 HydrophobicContact CB-CG2 4.41Å; V5-V30 HydrophobicContact CG1-CG2 4.25Å; V5-V30 HydrophobicContact CG2-CG2 4.03Å; V5-L43 HydrophobicContact CG1-CD2 4.18Å; V5-L67 CarbonylContact C-O 3.52Å; V5-L67 WeakPolarHBondContact CA-O 3.29Å; V5-L67 HydrophobicContact CG2-CB 4.49Å; V5-L69 HydrophobicContact CG1-CB 3.74Å; V5-L69 HydrophobicContact CG1-CD1 4.31Å
6K92.6Very high89.7Confident75 Ų7563.3 Ų63.333%0.32633%0.33SS..EExtended strand (participates in β ladder)trans-93.9117.2175.4-171.6169-173.6167.20109.4K11 E12 V66 L67 H68 L69K6-K11 WeakPolarHBondContact CA-O 3.43Å; K6-E12 HydrophobicContact CB-CG 4.21Å; K6-E12 HydrophobicContact CD-CG 4.36Å; K6-E12 HydrophobicContact CG-CG 4.07Å; K6-V66 HydrophobicContact CB-CG1 4.1Å; K6-L67 PolarHBondContact N-O 2.9Å; K6-H68 WeakPolarHBondContact O-CA 3.48Å; K6-L69 PolarHBondContact O-N 3.45Å
7T88.7Confident89.6Confident9 Ų959.8 Ų59.86%0.05531%0.311CS..EExtended strand (participates in β ladder)trans-83.5163.217766.40000111T9 G10 K11 E34 L69T7-T9 PolarHBondContact O-N 3.32Å; T7-T9 PolarHBondContact OG1-OG1 2.87Å; T7-G10 PolarHBondContact O-N 2.81Å; T7-K11 PolarHBondContact N-O 3.18Å; T7-K11 PolarHBondContact OG1-N 2.86Å; T7-K11 PolarHBondContact OG1-O 3.22Å; T7-E34 HydrophobicContact CG2-CG 4.22Å; T7-L69 HydrophobicContact CG2-CD2 4.31Å
8L84.1Confident89.7Confident112 Ų11262.9 Ų62.959%0.58632%0.324SS*.THydrogen-bonded Turntrans-59.2-23.9175.2-76.1173.5000113.7G10 L69 V70 L71L8-G10 PolarHBondContact O-N 3.17Å; L8-L69 PolarHBondContact N-O 3.07Å; L8-V70 HydrophobicContact CD1-CB 3.95Å; L8-V70 HydrophobicContact CD1-CG1 4.38Å; L8-V70 HydrophobicContact CD2-CB 4.34Å; L8-V70 HydrophobicContact CD2-CG1 3.85Å; L8-V70 HydrophobicContact CG-CB 4.19Å; L8-V70 HydrophobicContact CG-CG1 4.14Å; L8-L71 HydrophobicContact CD1-CB 4.23Å
9T82.6Confident89.6Confident111 Ų11162.7 Ų62.768%0.68133%0.328SS*.THydrogen-bonded Turntrans-75.2-1.6175.259.50000112.5T7 K11T7-T9 PolarHBondContact O-N 3.32Å; T7-T9 PolarHBondContact OG1-OG1 2.87Å; T9-K11 VanDerWaalsContact C-N 3.29Å
10G85.4Confident89.6Confident45 Ų4564.8 Ų64.846%0.46434%0.343SS..SBendtrans81.85.8-17800000113.7T7 L8T7-G10 PolarHBondContact O-N 2.81Å; L8-G10 PolarHBondContact O-N 3.17Å
11K87.2Confident89.6Confident105 Ų10563.6 Ų63.646%0.45734%0.337SS..  trans-81.6134.4177.4-170.9178.6174.7-164.30110K6 T7 T9 I13 E34K6-K11 WeakPolarHBondContact CA-O 3.43Å; T7-K11 PolarHBondContact N-O 3.18Å; T7-K11 PolarHBondContact OG1-N 2.86Å; T7-K11 PolarHBondContact OG1-O 3.22Å; T9-K11 VanDerWaalsContact C-N 3.29Å; K11-I13 HydrophobicContact CG-CG2 4.47Å; K11-E34 WeakPolarHBondContact CD-OE1 3.43Å; K11-E34 WeakPolarHBondContact CE-OE1 3.44Å; K11-E34 IonicContact NZ-OE1 2.72Å; K11-E34 PolarHBondContact NZ-OE1 3.49Å
12E92.4Very high89.8Confident109 Ų10966.3 Ų66.351%0.50935%0.347SS..EExtended strand (participates in β ladder)trans-105.8122.4175.5-66.3175.987.300108.8V5 K6V5-E12 WeakPolarHBondContact O-CA 3.42Å; K6-E12 HydrophobicContact CB-CG 4.21Å; K6-E12 HydrophobicContact CD-CG 4.36Å; K6-E12 HydrophobicContact CG-CG 4.07Å
13I91.4Very high89.9Confident14 Ų1462.5 Ų62.57%0.07233%0.327CS..EExtended strand (participates in β ladder)trans-111.3139.6174.859.5173.3000109.8K4 V5 K11 I15 V30 K33 E34K4-I13 CarbonylContact C-O 3.58Å; K4-I13 WeakPolarHBondContact CA-O 3.31Å; V5-I13 HydrophobicContact CB-CD1 4.23Å; V5-I13 HydrophobicContact CB-CG1 3.76Å; V5-I13 PolarHBondContact N-O 2.88Å; V5-I13 WeakPolarHBondContact O-CG1 3.47Å; V5-I13 PolarHBondContact O-N 2.78Å; K11-I13 HydrophobicContact CG-CG2 4.47Å; I13-I15 HydrophobicContact CD1-CG2 4.44Å; I13-V30 HydrophobicContact CD1-CB 4.33Å; I13-V30 HydrophobicContact CD1-CG1 3.95Å; I13-V30 HydrophobicContact CD1-CG2 3.99Å; I13-K33 HydrophobicContact CD1-CB 4.02Å; I13-E34 HydrophobicContact CD1-CG 4.13Å
14E93Very high89.8Confident109 Ų10967.8 Ų67.851%0.50935%0.352SS..EExtended strand (participates in β ladder)trans-98.8125.2175-63-175.1107.100109L2 I3 K4L2-E14 HydrophobicContact CD1-CB 4.1Å; L2-E14 HydrophobicContact CD2-CB 4.23Å; L2-E14 HydrophobicContact CD2-CG 4.44Å; L2-E14 WeakPolarHBondContact CD2-OE1 3.46Å; L2-E14 HydrophobicContact CG-CB 4.2Å; I3-E14 WeakPolarHBondContact O-CA 3.49Å; K4-E14 HydrophobicContact CG-CG 4.3Å
15I91.2Very high89.7Confident7 Ų768.8 Ų68.84%0.03635%0.354CS..EExtended strand (participates in β ladder)trans-125.6143.5175.766.8170.1000109.6I3 V5 I13 I17 I26 R29 V30 K33I3-I15 HydrophobicContact CD1-CD1 3.77Å; I3-I15 HydrophobicContact CD1-CG1 3.56Å; I3-I15 HydrophobicContact CG1-CD1 4.25Å; I3-I15 HydrophobicContact CG1-CG1 3.71Å; I3-I15 PolarHBondContact N-O 3.27Å; I3-I15 PolarHBondContact O-N 2.93Å; V5-I15 HydrophobicContact CG2-CD1 4.02Å; V5-I15 HydrophobicContact CG2-CG1 4.26Å; I13-I15 HydrophobicContact CD1-CG2 4.44Å; I15-I17 HydrophobicContact CD1-CG2 3.84Å; I15-I17 HydrophobicContact CG1-CG2 4.11Å; I15-I26 HydrophobicContact CD1-CB 4.46Å; I15-I26 HydrophobicContact CD1-CG2 3.7Å; I15-R29 HydrophobicContact CB-CB 4.32Å; I15-R29 HydrophobicContact CD1-CB 4.01Å; I15-R29 HydrophobicContact CG2-CB 4.22Å; I15-V30 HydrophobicContact CD1-CG2 4.17Å; I15-K33 HydrophobicContact CG2-CG 4.41Å
16D90.8Very high89.6Confident101 Ų10168.8 Ų68.854%0.5435%0.354SS..EExtended strand (participates in β ladder)trans-95.5125.5173.3-173.5-109.6000109.8M1 L2M1-D16 VanDerWaalsContact C-OD2 3.25Å; M1-D16 PolarHBondContact N-OD2 3.31Å; L2-D16 HydrophobicContact CD1-CB 4.4Å
17I89.6Confident89.5Confident3 Ų366.5 Ų66.52%0.01534%0.344CS..  trans-139.3160.3-179.462150.3000110.1M1 I3 I15 I26 A56M1-I17 WeakPolarHBondContact CA-O 3.44Å; M1-I17 HydrophobicContact CE-CD1 3.65Å; M1-I17 HydrophobicContact CE-CG1 4.04Å; M1-I17 HydrophobicContact CG-CG1 4.19Å; M1-I17 WeakPolarHBondContact CG-O 3.49Å; M1-I17 PolarHBondContact N-O 2.76Å; M1-I17 PolarHBondContact O-N 2.8Å; I3-I17 HydrophobicContact CG1-CD1 3.97Å; I3-I17 HydrophobicContact CG1-CG1 3.87Å; I3-I17 HydrophobicContact CG2-CD1 4.26Å; I3-I17 HydrophobicContact CG2-CG1 4.22Å; I15-I17 HydrophobicContact CD1-CG2 3.84Å; I15-I17 HydrophobicContact CG1-CG2 4.11Å; I17-I26 HydrophobicContact CD1-CD1 3.82Å; I17-I26 HydrophobicContact CD1-CG1 4.07Å; I17-I26 HydrophobicContact CG2-CG1 4.2Å; I17-A56 HydrophobicContact CD1-CB 3.9Å
18E90.7Very high89.6Confident116 Ų11670.2 Ų70.254%0.54236%0.36SS..  trans-98.5151.4171.7-61.2-168.568.300111.6T20 D21E18-T20 WeakPolarHBondContact CB-OG1 3.45Å; E18-T20 PolarHBondContact O-N 3.19Å; E18-D21 WeakPolarHBondContact CA-OD2 3.46Å; E18-D21 VanDerWaalsContact CB-OD2 3.29Å; E18-D21 WeakPolarHBondContact CB-OD2 3.35Å; E18-D21 PolarHBondContact N-OD2 2.87Å; E18-D21 VanDerWaalsContact O-CB 3.31Å; E18-D21 WeakPolarHBondContact O-CB 3.33Å; E18-D21 PolarHBondContact O-N 3.41Å
19P86.9Confident89.9Confident60 Ų6069.4 Ų69.439%0.3935%0.349SS..THydrogen-bonded Turntrans-63.3-23.1175.226.8-34.9000112.4M1 D21 A57M1-P19 HydrophobicContact CE-CB 4.12Å; M1-P19 HydrophobicContact SD-CB 4.42Å; P19-D21 VanDerWaalsContact C-N 3.34Å; P19-A57 HydrophobicContact CB-CB 4.1Å; P19-A57 WeakPolarHBondContact O-CB 3.39Å; P19-A57 PolarHBondContact O-N 3.39Å
20T89.8Confident90.1Very high103 Ų10364.1 Ų64.163%0.63232%0.317SS*.THydrogen-bonded Turntrans-77.3-19.1173.445.90000112.9E18E18-T20 WeakPolarHBondContact CB-OG1 3.45Å; E18-T20 PolarHBondContact O-N 3.19Å
21D91.1Very high90.2Very high41 Ų4165.7 Ų65.722%0.21931%0.312CS..SBendtrans-68.2148.4177.6-79.6-59.3000111.7E18 P19 R25 T55 A56E18-D21 WeakPolarHBondContact CA-OD2 3.46Å; E18-D21 VanDerWaalsContact CB-OD2 3.29Å; E18-D21 WeakPolarHBondContact CB-OD2 3.35Å; E18-D21 PolarHBondContact N-OD2 2.87Å; E18-D21 VanDerWaalsContact O-CB 3.31Å; E18-D21 WeakPolarHBondContact O-CB 3.33Å; E18-D21 PolarHBondContact O-N 3.41Å; P19-D21 VanDerWaalsContact C-N 3.34Å; D21-R25 HydrophobicContact CB-CB 4.18Å; D21-R25 HydrophobicContact CB-CG 4.32Å; D21-T55 VanDerWaalsContact O-CA 3.31Å; D21-T55 WeakPolarHBondContact O-CA 3.01Å; D21-T55 WeakPolarHBondContact O-CB 3.41Å; D21-A56 PolarHBondContact O-N 3.31Å
22K92.1Very high90.2Very high113 Ų11367.6 Ų67.649%0.49132%0.323SS..BIsolated β-bridgetrans-79.1158.3173.4-68.1-178.2173.8179.50111.3E24 R25 T55K22-E24 HydrophobicContact CB-CB 4.41Å; K22-E24 PolarHBondContact O-N 2.89Å; K22-R25 VanDerWaalsContact O-CB 3.32Å; K22-R25 WeakPolarHBondContact O-CB 3.24Å; K22-R25 PolarHBondContact O-N 2.84Å; K22-T55 HydrophobicContact CG-CG2 4.2Å
23V90.7Very high89.9Confident0 Ų068.5 Ų68.50%033%0.325CS..Hα-helixtrans-61.2-28.7173.6173.30000112R25 I26 K27 L43 M50 N51 K54 Y59V23-R25 VanDerWaalsContact C-N 3.29Å; V23-R25 PolarHBondContact O-N 2.98Å; V23-I26 HydrophobicContact CG2-CD1 4.46Å; V23-I26 WeakPolarHBondContact O-CB 3.26Å; V23-I26 PolarHBondContact O-N 2.9Å; V23-K27 PolarHBondContact O-N 2.91Å; V23-K27 VanDerWaalsContact O-N 3.15Å; V23-L43 HydrophobicContact CG1-CD1 3.73Å; V23-M50 HydrophobicContact CG1-CB 3.79Å; V23-M50 HydrophobicContact CG2-CB 4.03Å; V23-M50 HydrophobicContact CG2-CE 3.32Å; V23-M50 HydrophobicContact CG2-SD 4.32Å; V23-N51 WeakPolarHBondContact CB-O 3.3Å; V23-N51 WeakPolarHBondContact CG2-O 3.45Å; V23-K54 WeakPolarHBondContact CG2-O 3.11Å; V23-K54 PolarHBondContact N-O 3.49Å; V23-K54 VanDerWaalsContact N-O 3.1Å; V23-Y59 HydrophobicContact CG2-CD2 4.25Å; V23-Y59 HydrophobicContact CG2-CE2 3.92Å
24E91.3Very high89.6Confident112 Ų11270.3 Ų70.352%0.52333%0.333SS..Hα-helixtrans-53.3-46.5171.2-173.8174.279.900112.1K22 I26 K27 E28 D52K22-E24 HydrophobicContact CB-CB 4.41Å; K22-E24 PolarHBondContact O-N 2.89Å; E24-I26 VanDerWaalsContact C-N 3.28Å; E24-I26 PolarHBondContact O-N 2.72Å; E24-K27 WeakPolarHBondContact O-CB 3.49Å; E24-K27 PolarHBondContact O-N 2.99Å; E24-E28 PolarHBondContact O-N 2.84Å; E24-D52 HydrophobicContact CB-CB 4.16Å
25R90.7Very high89.1Confident100 Ų10066.9 Ų66.938%0.37733%0.327SS..Hα-helixtrans-61-37178.7-16858.9164.3175.10.7112.6D21 K22 V23 K27 E28 R29D21-R25 HydrophobicContact CB-CB 4.18Å; D21-R25 HydrophobicContact CB-CG 4.32Å; K22-R25 VanDerWaalsContact O-CB 3.32Å; K22-R25 WeakPolarHBondContact O-CB 3.24Å; K22-R25 PolarHBondContact O-N 2.84Å; V23-R25 VanDerWaalsContact C-N 3.29Å; V23-R25 PolarHBondContact O-N 2.98Å; R25-K27 VanDerWaalsContact C-N 3.34Å; R25-E28 WeakPolarHBondContact CD-OE2 3.07Å; R25-E28 IonicContact CZ-OE2 3.9Å; R25-E28 IonicContact NE-OE2 3.98Å; R25-E28 IonicContact NH1-OE1 3.74Å; R25-E28 IonicContact NH1-OE2 2.98Å; R25-E28 PolarHBondContact NH1-OE2 3.29Å; R25-E28 PolarHBondContact O-N 3.21Å; R25-R29 WeakPolarHBondContact O-CG 3.33Å; R25-R29 PolarHBondContact O-N 3.11Å; R25-R29 VanDerWaalsContact O-N 3.08Å
26I89.6Confident88.8Confident0 Ų067.7 Ų67.70%033%0.331CS..Hα-helixtrans-61.1-46175.1-55.3-178.8000109.5I15 I17 V23 E24 E28 R29 V30 L43 L67I15-I26 HydrophobicContact CD1-CB 4.46Å; I15-I26 HydrophobicContact CD1-CG2 3.7Å; I17-I26 HydrophobicContact CD1-CD1 3.82Å; I17-I26 HydrophobicContact CD1-CG1 4.07Å; I17-I26 HydrophobicContact CG2-CG1 4.2Å; V23-I26 HydrophobicContact CG2-CD1 4.46Å; V23-I26 WeakPolarHBondContact O-CB 3.26Å; V23-I26 PolarHBondContact O-N 2.9Å; E24-I26 VanDerWaalsContact C-N 3.28Å; E24-I26 PolarHBondContact O-N 2.72Å; I26-E28 PolarHBondContact O-N 3.49Å; I26-R29 PolarHBondContact O-N 2.87Å; I26-V30 VanDerWaalsContact O-CG2 3.24Å; I26-V30 WeakPolarHBondContact O-CG2 3.36Å; I26-V30 PolarHBondContact O-N 2.87Å; I26-L43 HydrophobicContact CB-CD1 4.04Å; I26-L43 HydrophobicContact CG2-CD1 3.66Å; I26-L43 HydrophobicContact CG2-CD2 4.35Å; I26-L67 HydrophobicContact CD1-CD2 4.42Å; I26-L67 HydrophobicContact CG2-CD2 4.44Å
27K89.5Confident88.6Confident27 Ų2765.2 Ų65.212%0.11732%0.321CS..Hα-helixtrans-64.2-40179.5-61.6175.9-177.51730112V23 E24 R25 V30 E31 P38 Q41 L43 D52V23-K27 PolarHBondContact O-N 2.91Å; V23-K27 VanDerWaalsContact O-N 3.15Å; E24-K27 WeakPolarHBondContact O-CB 3.49Å; E24-K27 PolarHBondContact O-N 2.99Å; R25-K27 VanDerWaalsContact C-N 3.34Å; K27-V30 PolarHBondContact O-N 2.89Å; K27-E31 PolarHBondContact O-N 3.27Å; K27-P38 HydrophobicContact CB-CB 3.68Å; K27-P38 HydrophobicContact CD-CB 4.08Å; K27-P38 HydrophobicContact CG-CB 4.5Å; K27-Q41 PolarHBondContact O-NE2 2.89Å; K27-Q41 PolarHBondContact O-OE1 3.35Å; K27-L43 HydrophobicContact CG-CD1 3.58Å; K27-L43 HydrophobicContact CG-CG 4.39Å; K27-D52 IonicContact NZ-OD1 3.59Å
28E90.7Very high88.4Confident87 Ų8767.3 Ų67.341%0.40734%0.335SS..Hα-helixtrans-58.6-47.7173.8-67.7-175.298.100111.5E24 R25 I26 V30 E31 E32E24-E28 PolarHBondContact O-N 2.84Å; R25-E28 WeakPolarHBondContact CD-OE2 3.07Å; R25-E28 IonicContact CZ-OE2 3.9Å; R25-E28 IonicContact NE-OE2 3.98Å; R25-E28 IonicContact NH1-OE1 3.74Å; R25-E28 IonicContact NH1-OE2 2.98Å; R25-E28 PolarHBondContact NH1-OE2 3.29Å; R25-E28 PolarHBondContact O-N 3.21Å; I26-E28 PolarHBondContact O-N 3.49Å; E28-V30 PolarHBondContact O-N 3.39Å; E28-E31 WeakPolarHBondContact O-CB 3.49Å; E28-E31 PolarHBondContact O-N 2.76Å; E28-E31 VanDerWaalsContact O-N 3.17Å; E28-E32 PolarHBondContact O-N 3.31Å
29R90.6Very high88.1Confident94 Ų9470.7 Ų70.736%0.35535%0.35SS..Hα-helixtrans-60.9-36.2177.4-70.5-62-170.7-173.9-0.2112.7I15 R25 I26 E32 K33I15-R29 HydrophobicContact CB-CB 4.32Å; I15-R29 HydrophobicContact CD1-CB 4.01Å; I15-R29 HydrophobicContact CG2-CB 4.22Å; R25-R29 WeakPolarHBondContact O-CG 3.33Å; R25-R29 PolarHBondContact O-N 3.11Å; R25-R29 VanDerWaalsContact O-N 3.08Å; I26-R29 PolarHBondContact O-N 2.87Å; R29-E32 IonicContact NH1-OE1 3.53Å; R29-K33 WeakPolarHBondContact O-CG 3.12Å; R29-K33 PolarHBondContact O-N 3.06Å
30V88.2Confident88.2Confident0 Ų070.8 Ų70.80%035%0.346CS..Hα-helixtrans-73.7-36.4177.5175.30000111.4V5 I13 I15 I26 K27 E28 E32 K33 E34 L69V5-V30 HydrophobicContact CB-CG2 4.41Å; V5-V30 HydrophobicContact CG1-CG2 4.25Å; V5-V30 HydrophobicContact CG2-CG2 4.03Å; I13-V30 HydrophobicContact CD1-CB 4.33Å; I13-V30 HydrophobicContact CD1-CG1 3.95Å; I13-V30 HydrophobicContact CD1-CG2 3.99Å; I15-V30 HydrophobicContact CD1-CG2 4.17Å; I26-V30 VanDerWaalsContact O-CG2 3.24Å; I26-V30 WeakPolarHBondContact O-CG2 3.36Å; I26-V30 PolarHBondContact O-N 2.87Å; K27-V30 PolarHBondContact O-N 2.89Å; E28-V30 PolarHBondContact O-N 3.39Å; V30-E32 VanDerWaalsContact C-N 3.32Å; V30-E32 PolarHBondContact O-N 2.73Å; V30-K33 PolarHBondContact O-N 3.01Å; V30-E34 PolarHBondContact O-N 3.35Å; V30-L69 HydrophobicContact CB-CD1 4.46Å; V30-L69 HydrophobicContact CG1-CD1 3.4Å; V30-L69 VanDerWaalsContact CG1-CD1 3.4Å
31E87.7Confident88.1Confident78 Ų7866.2 Ų66.236%0.36432%0.317SS..Hα-helixtrans-59.2-45.3171.2-179.1-172.899.300110.4K27 E28 K33 G35 I36 P37 P38K27-E31 PolarHBondContact O-N 3.27Å; E28-E31 WeakPolarHBondContact O-CB 3.49Å; E28-E31 PolarHBondContact O-N 2.76Å; E28-E31 VanDerWaalsContact O-N 3.17Å; E31-K33 PolarHBondContact O-N 2.97Å; E31-G35 WeakPolarHBondContact O-CA 3.43Å; E31-G35 PolarHBondContact O-N 2.85Å; E31-I36 WeakPolarHBondContact CA-O 3.33Å; E31-I36 VanDerWaalsContact CB-O 3.26Å; E31-I36 WeakPolarHBondContact CB-O 3.44Å; E31-I36 WeakPolarHBondContact CG-O 2.83Å; E31-P37 WeakPolarHBondContact OE2-CA 3.47Å; E31-P38 WeakPolarHBondContact OE2-CD 3.38Å
32E86.9Confident88Confident146 Ų14670 Ų7068%0.68233%0.328SS*.Hα-helixtrans-61.8-31.7178.8-172.6173.876.100112.6E28 R29 V30E28-E32 PolarHBondContact O-N 3.31Å; R29-E32 IonicContact NH1-OE1 3.53Å; V30-E32 VanDerWaalsContact C-N 3.32Å; V30-E32 PolarHBondContact O-N 2.73Å
33K85.3Confident87.9Confident128 Ų12864.6 Ų64.656%0.55731%0.305SS*.Hα-helixtrans-87.4-43.1-177.5-73.9-80.8-174.4170.70114I13 I15 R29 V30 E31I13-K33 HydrophobicContact CD1-CB 4.02Å; I15-K33 HydrophobicContact CG2-CG 4.41Å; R29-K33 WeakPolarHBondContact O-CG 3.12Å; R29-K33 PolarHBondContact O-N 3.06Å; V30-K33 PolarHBondContact O-N 3.01Å; E31-K33 PolarHBondContact O-N 2.97Å
34E84.6Confident88Confident51 Ų5166.3 Ų66.324%0.23831%0.314CS..Hα-helixtrans-105.1-16.9-175.2-73.6-79.598.200113.1T7 K11 I13 V30 I36T7-E34 HydrophobicContact CG2-CG 4.22Å; K11-E34 WeakPolarHBondContact CD-OE1 3.43Å; K11-E34 WeakPolarHBondContact CE-OE1 3.44Å; K11-E34 IonicContact NZ-OE1 2.72Å; K11-E34 PolarHBondContact NZ-OE1 3.49Å; I13-E34 HydrophobicContact CD1-CG 4.13Å; V30-E34 PolarHBondContact O-N 3.35Å; E34-I36 VanDerWaalsContact C-N 3.35Å; E34-I36 HydrophobicContact CB-CD1 3.59Å; E34-I36 HydrophobicContact CB-CG1 3.95Å; E34-I36 HydrophobicContact CG-CD1 4.26Å
35G84.5Confident87.9Confident37 Ų3763.2 Ų63.238%0.38130%0.297SS..  trans76.318.6-175.800000114.2E31E31-G35 WeakPolarHBondContact O-CA 3.43Å; E31-G35 PolarHBondContact O-N 2.85Å
36I84.6Confident87.8Confident25 Ų2563.7 Ų63.713%0.12832%0.316CS..  trans-96.7127.2-176.7-58.8158.9000108.8E31 E34 Q40 Q41 L69 L71E31-I36 WeakPolarHBondContact CA-O 3.33Å; E31-I36 VanDerWaalsContact CB-O 3.26Å; E31-I36 WeakPolarHBondContact CB-O 3.44Å; E31-I36 WeakPolarHBondContact CG-O 2.83Å; E34-I36 VanDerWaalsContact C-N 3.35Å; E34-I36 HydrophobicContact CB-CD1 3.59Å; E34-I36 HydrophobicContact CB-CG1 3.95Å; E34-I36 HydrophobicContact CG-CD1 4.26Å; I36-Q40 HydrophobicContact CG2-CB 4.27Å; I36-Q41 HydrophobicContact CB-CG 4.17Å; I36-Q41 HydrophobicContact CG2-CG 3.63Å; I36-Q41 PolarHBondContact O-NE2 3.38Å; I36-L69 HydrophobicContact CD1-CD2 4.44Å; I36-L71 HydrophobicContact CB-CD2 4.49Å; I36-L71 HydrophobicContact CD1-CD2 4Å; I36-L71 HydrophobicContact CG1-CD2 4.31Å; I36-L71 HydrophobicContact CG2-CD2 3.42Å; I36-L71 VanDerWaalsContact CG2-CD2 3.42Å
37P85.8Confident87.7Confident49 Ų4967.2 Ų67.232%0.31835%0.352SS..  trans-65.9142.2-179.925.4-33.5000112.6E31 Q39 Q40 Q41E31-P37 WeakPolarHBondContact OE2-CA 3.47Å; P37-Q39 PolarHBondContact O-N 3.22Å; P37-Q40 HydrophobicContact CG-CB 4.11Å; P37-Q40 HydrophobicContact CG-CG 3.87Å; P37-Q40 PolarHBondContact O-N 2.71Å; P37-Q41 WeakPolarHBondContact O-CG 3.26Å; P37-Q41 PolarHBondContact O-N 3.25Å
38P85.8Confident87.7Confident47 Ų4773.2 Ų73.231%0.30538%0.378SS..THydrogen-bonded Turntrans-60.3-25.1-174.526.1-38.3000112.8K27 E31 Q40 Q41K27-P38 HydrophobicContact CB-CB 3.68Å; K27-P38 HydrophobicContact CD-CB 4.08Å; K27-P38 HydrophobicContact CG-CB 4.5Å; E31-P38 WeakPolarHBondContact OE2-CD 3.38Å; P38-Q40 VanDerWaalsContact C-N 3.31Å; P38-Q41 PolarHBondContact O-N 3.27Å
39Q84.4Confident87.7Confident186 Ų18674.4 Ų74.487%0.86938%0.384SS*.THydrogen-bonded Turntrans-70.9-26.4176.9-162.2179.7-36.600112.7P37P37-Q39 PolarHBondContact O-N 3.22Å
40Q87.6Confident87.7Confident63 Ų6370.5 Ų70.529%0.29437%0.37SS..THydrogen-bonded Turntrans-91.2-17.2173.1-68180-15.100112.3I36 P37 P38 L71 A72I36-Q40 HydrophobicContact CG2-CB 4.27Å; P37-Q40 HydrophobicContact CG-CB 4.11Å; P37-Q40 HydrophobicContact CG-CG 3.87Å; P37-Q40 PolarHBondContact O-N 2.71Å; P38-Q40 VanDerWaalsContact C-N 3.31Å; Q40-L71 WeakPolarHBondContact O-CA 3.31Å; Q40-A72 PolarHBondContact O-N 3.14Å
41Q87.9Confident87.7Confident7 Ų773.8 Ų73.83%0.03339%0.388CS..EExtended strand (participates in β ladder)trans-81128.3178.2-61-179.437.200111.7K27 I36 P37 P38 L69K27-Q41 PolarHBondContact O-NE2 2.89Å; K27-Q41 PolarHBondContact O-OE1 3.35Å; I36-Q41 HydrophobicContact CB-CG 4.17Å; I36-Q41 HydrophobicContact CG2-CG 3.63Å; I36-Q41 PolarHBondContact O-NE2 3.38Å; P37-Q41 WeakPolarHBondContact O-CG 3.26Å; P37-Q41 PolarHBondContact O-N 3.25Å; P38-Q41 PolarHBondContact O-N 3.27Å; Q41-L69 HydrophobicContact CB-CD1 4.2Å; Q41-L69 HydrophobicContact CG-CD1 3.98Å
42R90.2Very high87.8Confident119 Ų11973 Ų7345%0.44939%0.386SS..EExtended strand (participates in β ladder)trans-121.4107.6171.3176.7179.7-73-160.8-2.6108.9I44 Q49 V70R42-I44 HydrophobicContact CG-CD1 4.31Å; R42-Q49 HydrophobicContact CG-CG 4.25Å; R42-V70 HydrophobicContact CB-CG2 3.56Å; R42-V70 HydrophobicContact CG-CG2 3.7Å; R42-V70 PolarHBondContact N-O 3.1Å; R42-V70 PolarHBondContact O-N 3.28Å
43L90.4Very high87.9Confident1 Ų173.2 Ų73.21%0.00539%0.387CS..EExtended strand (participates in β ladder)trans-82.8130.2177.2-70.5163.9000109.8V5 V23 I26 K27 Q49 M50 L67 L69V5-L43 HydrophobicContact CG1-CD2 4.18Å; V23-L43 HydrophobicContact CG1-CD1 3.73Å; I26-L43 HydrophobicContact CB-CD1 4.04Å; I26-L43 HydrophobicContact CG2-CD1 3.66Å; I26-L43 HydrophobicContact CG2-CD2 4.35Å; K27-L43 HydrophobicContact CG-CD1 3.58Å; K27-L43 HydrophobicContact CG-CG 4.39Å; L43-Q49 WeakPolarHBondContact O-CA 3.43Å; L43-M50 HydrophobicContact CB-CB 4.21Å; L43-M50 HydrophobicContact CB-SD 4.29Å; L43-M50 PolarHBondContact O-N 3.05Å; L43-L67 HydrophobicContact CD2-CD2 4.28Å; L43-L69 HydrophobicContact CD2-CB 4.43Å
44I91.2Very high88.2Confident36 Ų3671.5 Ų71.519%0.18538%0.379CS..EExtended strand (participates in β ladder)trans-123.6126.6176.5-64.3129.1000108.4R42 K48 Q49 H68 V70R42-I44 HydrophobicContact CG-CD1 4.31Å; I44-K48 CarbonylContact C-O 3.59Å; I44-K48 WeakPolarHBondContact CA-O 3.35Å; I44-Q49 HydrophobicContact CG1-CG 4.02Å; I44-H68 HydrophobicContact CB-CB 4.39Å; I44-H68 PolarHBondContact N-O 3.35Å; I44-H68 PolarHBondContact O-N 2.97Å; I44-V70 HydrophobicContact CD1-CB 4.05Å; I44-V70 HydrophobicContact CD1-CG1 3.47Å; I44-V70 VanDerWaalsContact CD1-CG1 3.47Å; I44-V70 HydrophobicContact CD1-CG2 3.41Å; I44-V70 VanDerWaalsContact CD1-CG2 3.41Å
45Y90.6Very high88.6Confident46 Ų4671.1 Ų71.118%0.1838%0.381CS..EExtended strand (participates in β ladder)trans-130.9131.4176.6-176.6-108.9000109.6G47 K48 Y59 I61 S65 L67Y45-G47 PolarHBondContact O-N 3.34Å; Y45-K48 PolarHBondContact N-O 2.89Å; Y45-K48 PolarHBondContact O-N 3.39Å; Y45-K48 VanDerWaalsContact O-O 3.1Å; Y45-Y59 VanDerWaalsContact CE1-O 3.3Å; Y45-Y59 WeakPolarHBondContact CE1-O 3.39Å; Y45-I61 HydrophobicContact CD1-CG1 4.03Å; Y45-I61 HydrophobicContact CD2-CG1 4.48Å; Y45-I61 HydrophobicContact CE1-CG1 3.9Å; Y45-I61 HydrophobicContact CE2-CG1 4.36Å; Y45-I61 HydrophobicContact CG-CG1 4.3Å; Y45-S65 PolarHBondContact OH-OG 3.04Å; Y45-L67 HydrophobicContact CD2-CD1 3.98Å; Y45-L67 HydrophobicContact CD2-CG 3.96Å; Y45-L67 HydrophobicContact CE2-CD1 4.36Å; Y45-L67 HydrophobicContact CG-CG 4.5Å
46S88.1Confident88.8Confident111 Ų11169.4 Ų69.478%0.77636%0.363SS*.THydrogen-bonded Turntrans52.537.3-177.4-152.60000113.5K48S46-K48 PolarHBondContact O-N 3.47Å
47G86.8Confident89Confident73 Ų7370.4 Ų70.475%0.75338%0.375SS*.THydrogen-bonded Turntrans71.74.9-177.200000115.3Y45Y45-G47 PolarHBondContact O-N 3.34Å
48K89.3Confident89.2Confident153 Ų15372.2 Ų72.267%0.66538%0.382SS*.EExtended strand (participates in β ladder)trans-110.8136.6176.1-70.5-177.8178.1179.80111.1I44 Y45 S46 M50I44-K48 CarbonylContact C-O 3.59Å; I44-K48 WeakPolarHBondContact CA-O 3.35Å; Y45-K48 PolarHBondContact N-O 2.89Å; Y45-K48 PolarHBondContact O-N 3.39Å; Y45-K48 VanDerWaalsContact O-O 3.1Å; S46-K48 PolarHBondContact O-N 3.47Å; K48-M50 PolarHBondContact O-N 3Å
49Q90.7Very high89.3Confident113 Ų11371.9 Ų71.953%0.52838%0.375SS..EExtended strand (participates in β ladder)trans-66.8133.1170.8-68.1178.2-112.800109.6R42 L43 I44R42-Q49 HydrophobicContact CG-CG 4.25Å; L43-Q49 WeakPolarHBondContact O-CA 3.43Å; I44-Q49 HydrophobicContact CG1-CG 4.02Å
50M90.4Very high89.5Confident11 Ų1170.8 Ų70.85%0.05437%0.367CS..PPolyproline II helixtrans-86.2131178.2-64.4-176.381.700110.7V23 L43 K48 Y59 I61 L67V23-M50 HydrophobicContact CG1-CB 3.79Å; V23-M50 HydrophobicContact CG2-CB 4.03Å; V23-M50 HydrophobicContact CG2-CE 3.32Å; V23-M50 HydrophobicContact CG2-SD 4.32Å; L43-M50 HydrophobicContact CB-CB 4.21Å; L43-M50 HydrophobicContact CB-SD 4.29Å; L43-M50 PolarHBondContact O-N 3.05Å; K48-M50 PolarHBondContact O-N 3Å; M50-Y59 HydrophobicContact CB-CE2 4.18Å; M50-Y59 HydrophobicContact CE-CD1 4.35Å; M50-Y59 HydrophobicContact CE-CD2 3.15Å; M50-Y59 HydrophobicContact CE-CE2 3.62Å; M50-Y59 HydrophobicContact CE-CG 3.56Å; M50-Y59 HydrophobicContact CG-CD1 4.41Å; M50-Y59 HydrophobicContact CG-CD2 4.43Å; M50-Y59 HydrophobicContact CG-CE1 4.26Å; M50-Y59 HydrophobicContact CG-CE2 4.24Å; M50-Y59 HydrophobicContact CG-CG 4.5Å; M50-I61 HydrophobicContact CE-CD1 3.15Å; M50-I61 HydrophobicContact CE-CG1 4.35Å; M50-I61 HydrophobicContact SD-CD1 3.97Å; M50-L67 HydrophobicContact SD-CD2 3.67Å; M50-L67 HydrophobicContact SD-CG 4.42Å
51N89.9Confident89.5Confident70 Ų7068.1 Ų68.137%0.37436%0.355SS..PPolyproline II helixtrans-87.3136.5172.9-141.651.1000111V23 E53 K54 Y59V23-N51 WeakPolarHBondContact CB-O 3.3Å; V23-N51 WeakPolarHBondContact CG2-O 3.45Å; N51-E53 PolarHBondContact ND2-OE2 3.15Å; N51-E53 PolarHBondContact O-N 3.04Å; N51-K54 HydrophobicContact CB-CD 4.47Å; N51-K54 PolarHBondContact O-N 3.03Å; N51-K54 VanDerWaalsContact O-N 3.14Å; N51-Y59 PolarHBondContact N-OH 2.7Å
52D88.8Confident89.4Confident61 Ų6174.6 Ų74.633%0.32639%0.385SS..THydrogen-bonded Turntrans-60.4-28.9175.238.3-90.3000113.6E24 K27 K54E24-D52 HydrophobicContact CB-CB 4.16Å; K27-D52 IonicContact NZ-OD1 3.59Å; D52-K54 PolarHBondContact O-N 3.29Å
53E88.8Confident89.3Confident150 Ų15071.5 Ų71.570%0.70139%0.39SS*.THydrogen-bonded Turntrans-68.4-13.4175.9-59.2-178.792.400114.1N51N51-E53 PolarHBondContact ND2-OE2 3.15Å; N51-E53 PolarHBondContact O-N 3.04Å
54K91.6Very high89.2Confident92 Ų9273.8 Ų73.840%0.441%0.414SS..SBendtrans-104.6152.2-177.5-78.7173165.3-1180111.8V23 N51 D52 D58 Y59V23-K54 WeakPolarHBondContact CG2-O 3.11Å; V23-K54 PolarHBondContact N-O 3.49Å; V23-K54 VanDerWaalsContact N-O 3.1Å; N51-K54 HydrophobicContact CB-CD 4.47Å; N51-K54 PolarHBondContact O-N 3.03Å; N51-K54 VanDerWaalsContact O-N 3.14Å; D52-K54 PolarHBondContact O-N 3.29Å; K54-D58 HydrophobicContact CB-CB 4.49Å; K54-D58 WeakPolarHBondContact CD-OD1 3.37Å; K54-D58 WeakPolarHBondContact CE-OD1 3.45Å; K54-D58 IonicContact NZ-OD1 2.71Å; K54-D58 PolarHBondContact NZ-OD1 2.7Å; K54-Y59 HydrophobicContact CB-CD2 4.23Å; K54-Y59 HydrophobicContact CB-CE2 3.35Å; K54-Y59 HydrophobicContact CD-CE1 4.38Å; K54-Y59 HydrophobicContact CD-CE2 3.99Å; K54-Y59 WeakPolarHBondContact CD-OH 3.31Å; K54-Y59 HydrophobicContact CG-CE2 4.3Å
55T92.3Very high89.2Confident44 Ų4473 Ų7327%0.2741%0.411SS..BIsolated β-bridgetrans-91.8158.617956.10000112D21 K22 A57 D58 Y59D21-T55 VanDerWaalsContact O-CA 3.31Å; D21-T55 WeakPolarHBondContact O-CA 3.01Å; D21-T55 WeakPolarHBondContact O-CB 3.41Å; K22-T55 HydrophobicContact CG-CG2 4.2Å; T55-A57 PolarHBondContact O-N 3.17Å; T55-D58 WeakPolarHBondContact O-CB 3.35Å; T55-D58 PolarHBondContact O-N 3.42Å; T55-D58 VanDerWaalsContact O-N 3.07Å; T55-D58 PolarHBondContact OG1-N 2.94Å; T55-Y59 WeakPolarHBondContact O-CD2 3.38Å; T55-Y59 PolarHBondContact O-N 3.06Å
56A88.9Confident89.3Confident0 Ų073.5 Ų73.50%042%0.419CS..THydrogen-bonded Turntrans-58.4-35.417600000112.3M1 I17 D21 Y59 K60 I61M1-A56 HydrophobicContact CE-CB 3.92Å; I17-A56 HydrophobicContact CD1-CB 3.9Å; D21-A56 PolarHBondContact O-N 3.31Å; A56-Y59 PolarHBondContact O-N 3.41Å; A56-K60 PolarHBondContact O-N 3.17Å; A56-I61 HydrophobicContact CB-CB 4.2Å; A56-I61 HydrophobicContact CB-CD1 4.08Å; A56-I61 WeakPolarHBondContact O-CB 3.09Å; A56-I61 PolarHBondContact O-N 2.85Å
57A88.5Confident89.5Confident46 Ų4668.2 Ų68.238%0.3838%0.382SS..THydrogen-bonded Turntrans-62.9-37173.900000113.7P19 T55 Y59 K60P19-A57 HydrophobicContact CB-CB 4.1Å; P19-A57 WeakPolarHBondContact O-CB 3.39Å; P19-A57 PolarHBondContact O-N 3.39Å; T55-A57 PolarHBondContact O-N 3.17Å; A57-Y59 PolarHBondContact O-N 2.84Å; A57-K60 PolarHBondContact O-N 3.31Å
58D90.4Very high89.7Confident87 Ų8769.4 Ų69.447%0.46537%0.368SS..THydrogen-bonded Turntrans-61.5-37.7178.2-168.8-107.8000110.9K54 T55 K60K54-D58 HydrophobicContact CB-CB 4.49Å; K54-D58 WeakPolarHBondContact CD-OD1 3.37Å; K54-D58 WeakPolarHBondContact CE-OD1 3.45Å; K54-D58 IonicContact NZ-OD1 2.71Å; K54-D58 PolarHBondContact NZ-OD1 2.7Å; T55-D58 WeakPolarHBondContact O-CB 3.35Å; T55-D58 PolarHBondContact O-N 3.42Å; T55-D58 VanDerWaalsContact O-N 3.07Å; T55-D58 PolarHBondContact OG1-N 2.94Å; D58-K60 PolarHBondContact O-N 3.08Å
59Y88.6Confident89.8Confident40 Ų4062.2 Ų62.216%0.15734%0.337CS..THydrogen-bonded Turntrans-81.12.5174.5-68.2-76.5000114.4V23 Y45 M50 N51 K54 T55 A56 A57 I61V23-Y59 HydrophobicContact CG2-CD2 4.25Å; V23-Y59 HydrophobicContact CG2-CE2 3.92Å; Y45-Y59 VanDerWaalsContact CE1-O 3.3Å; Y45-Y59 WeakPolarHBondContact CE1-O 3.39Å; M50-Y59 HydrophobicContact CB-CE2 4.18Å; M50-Y59 HydrophobicContact CE-CD1 4.35Å; M50-Y59 HydrophobicContact CE-CD2 3.15Å; M50-Y59 HydrophobicContact CE-CE2 3.62Å; M50-Y59 HydrophobicContact CE-CG 3.56Å; M50-Y59 HydrophobicContact CG-CD1 4.41Å; M50-Y59 HydrophobicContact CG-CD2 4.43Å; M50-Y59 HydrophobicContact CG-CE1 4.26Å; M50-Y59 HydrophobicContact CG-CE2 4.24Å; M50-Y59 HydrophobicContact CG-CG 4.5Å; N51-Y59 PolarHBondContact N-OH 2.7Å; K54-Y59 HydrophobicContact CB-CD2 4.23Å; K54-Y59 HydrophobicContact CB-CE2 3.35Å; K54-Y59 HydrophobicContact CD-CE1 4.38Å; K54-Y59 HydrophobicContact CD-CE2 3.99Å; K54-Y59 WeakPolarHBondContact CD-OH 3.31Å; K54-Y59 HydrophobicContact CG-CE2 4.3Å; T55-Y59 WeakPolarHBondContact O-CD2 3.38Å; T55-Y59 PolarHBondContact O-N 3.06Å; A56-Y59 PolarHBondContact O-N 3.41Å; A57-Y59 PolarHBondContact O-N 2.84Å; Y59-I61 PolarHBondContact O-N 3.25Å
60K88Confident89.7Confident163 Ų16358.6 Ų58.671%0.70932%0.322SS*.THydrogen-bonded Turntrans55.933.2-174.6-54.9-65-174.2-174.60112.7A56 A57 D58 Q62A56-K60 PolarHBondContact O-N 3.17Å; A57-K60 PolarHBondContact O-N 3.31Å; D58-K60 PolarHBondContact O-N 3.08Å; K60-Q62 PolarHBondContact O-N 2.99Å
61I87.6Confident89.5Confident7 Ų761 Ų614%0.03634%0.335CS..  trans-67.2125.4174.5-66.6169.1000108.3M1 I3 Y45 M50 A56 Y59 L67M1-I61 HydrophobicContact CE-CB 4.32Å; M1-I61 HydrophobicContact CE-CG2 3.89Å; I3-I61 HydrophobicContact CG2-CG2 3.73Å; Y45-I61 HydrophobicContact CD1-CG1 4.03Å; Y45-I61 HydrophobicContact CD2-CG1 4.48Å; Y45-I61 HydrophobicContact CE1-CG1 3.9Å; Y45-I61 HydrophobicContact CE2-CG1 4.36Å; Y45-I61 HydrophobicContact CG-CG1 4.3Å; M50-I61 HydrophobicContact CE-CD1 3.15Å; M50-I61 HydrophobicContact CE-CG1 4.35Å; M50-I61 HydrophobicContact SD-CD1 3.97Å; A56-I61 HydrophobicContact CB-CB 4.2Å; A56-I61 HydrophobicContact CB-CD1 4.08Å; A56-I61 WeakPolarHBondContact O-CB 3.09Å; A56-I61 PolarHBondContact O-N 2.85Å; Y59-I61 PolarHBondContact O-N 3.25Å; I61-L67 HydrophobicContact CD1-CD1 4.46Å; I61-L67 HydrophobicContact CD1-CD2 4.19Å; I61-L67 HydrophobicContact CG2-CD1 4.46Å
62Q87.2Confident88.8Confident144 Ų14459.9 Ų59.967%0.67334%0.335SS*.  trans-109.8159.7174-64.6-174.7-9200110.7K60 G64 S65K60-Q62 PolarHBondContact O-N 2.99Å; Q62-G64 PolarHBondContact O-N 2.96Å; Q62-S65 PolarHBondContact N-OG 2.85Å; Q62-S65 VanDerWaalsContact N-OG 3.11Å; Q62-S65 WeakPolarHBondContact O-CB 3.32Å; Q62-S65 PolarHBondContact O-N 2.8Å; Q62-S65 PolarHBondContact O-OG 2.87Å
63G88.2Confident87.6Confident53 Ų5364.8 Ų64.855%0.54636%0.361SS..THydrogen-bonded Turntrans-53.9132.2169.700000111.1L2L2-G63 CarbonylContact O-C 3.46Å; L2-G63 VanDerWaalsContact O-CA 3.26Å; L2-G63 WeakPolarHBondContact O-CA 3.49Å
64G88.2Confident85.9Confident49 Ų4968.3 Ų68.351%0.50537%0.368SS..THydrogen-bonded Turntrans87-2.7-174.300000114.9L2 Q62L2-G64 PolarHBondContact O-N 2.73Å; Q62-G64 PolarHBondContact O-N 2.96Å
65S91.4Very high84.1Confident19 Ų1968.1 Ų68.113%0.13339%0.391CS..  trans-62.8144.9173.6-67.10000111.6K4 Y45 Q62K4-S65 PolarHBondContact N-O 2.92Å; Y45-S65 PolarHBondContact OH-OG 3.04Å; Q62-S65 PolarHBondContact N-OG 2.85Å; Q62-S65 VanDerWaalsContact N-OG 3.11Å; Q62-S65 WeakPolarHBondContact O-CB 3.32Å; Q62-S65 PolarHBondContact O-N 2.8Å; Q62-S65 PolarHBondContact O-OG 2.87Å
66V91.9Very high82.3Confident58 Ų5868.9 Ų68.935%0.35241%0.408SS..EExtended strand (participates in β ladder)trans-105.9119.2176.9-173.10000109.9K4 K6K4-V66 HydrophobicContact CB-CG2 4.16Å; K4-V66 HydrophobicContact CD-CG2 4.33Å; K4-V66 CarbonylContact O-C 3.59Å; K4-V66 VanDerWaalsContact O-CA 3.31Å; K4-V66 WeakPolarHBondContact O-CA 3.14Å; K6-V66 HydrophobicContact CB-CG1 4.1Å
67L92.2Very high80.8Confident0 Ų074.2 Ų74.20%045%0.445CS..EExtended strand (participates in β ladder)trans-99.8141.8173.4-7469.2000108.9I3 K4 V5 K6 I26 L43 Y45 M50 I61I3-L67 HydrophobicContact CB-CD1 4.47Å; I3-L67 HydrophobicContact CD1-CD1 3.9Å; I3-L67 HydrophobicContact CD1-CD2 4.32Å; K4-L67 PolarHBondContact O-N 2.71Å; V5-L67 CarbonylContact C-O 3.52Å; V5-L67 WeakPolarHBondContact CA-O 3.29Å; V5-L67 HydrophobicContact CG2-CB 4.49Å; K6-L67 PolarHBondContact N-O 2.9Å; I26-L67 HydrophobicContact CD1-CD2 4.42Å; I26-L67 HydrophobicContact CG2-CD2 4.44Å; L43-L67 HydrophobicContact CD2-CD2 4.28Å; Y45-L67 HydrophobicContact CD2-CD1 3.98Å; Y45-L67 HydrophobicContact CD2-CG 3.96Å; Y45-L67 HydrophobicContact CE2-CD1 4.36Å; Y45-L67 HydrophobicContact CG-CG 4.5Å; M50-L67 HydrophobicContact SD-CD2 3.67Å; M50-L67 HydrophobicContact SD-CG 4.42Å; I61-L67 HydrophobicContact CD1-CD1 4.46Å; I61-L67 HydrophobicContact CD1-CD2 4.19Å; I61-L67 HydrophobicContact CG2-CD1 4.46Å
68H91.8Very high79.1Confident97 Ų9780.6 Ų80.645%0.44947%0.467SS..EExtended strand (participates in β ladder)trans-97.7121.7173.2-73.881.9000109.3K6 I44K6-H68 WeakPolarHBondContact O-CA 3.48Å; I44-H68 HydrophobicContact CB-CB 4.39Å; I44-H68 PolarHBondContact N-O 3.35Å; I44-H68 PolarHBondContact O-N 2.97Å
69L90.3Very high77.2Confident3 Ų381.8 Ų81.82%0.01648%0.48CS..EExtended strand (participates in β ladder)trans-95.9125.7171.8178.4148.7000109.6V5 K6 T7 L8 V30 I36 Q41 L43 L71V5-L69 HydrophobicContact CG1-CB 3.74Å; V5-L69 HydrophobicContact CG1-CD1 4.31Å; K6-L69 PolarHBondContact O-N 3.45Å; T7-L69 HydrophobicContact CG2-CD2 4.31Å; L8-L69 PolarHBondContact N-O 3.07Å; V30-L69 HydrophobicContact CB-CD1 4.46Å; V30-L69 HydrophobicContact CG1-CD1 3.4Å; V30-L69 VanDerWaalsContact CG1-CD1 3.4Å; I36-L69 HydrophobicContact CD1-CD2 4.44Å; Q41-L69 HydrophobicContact CB-CD1 4.2Å; Q41-L69 HydrophobicContact CG-CD1 3.98Å; L43-L69 HydrophobicContact CD2-CB 4.43Å; L69-L71 HydrophobicContact CD2-CD2 4.38Å; L69-L71 HydrophobicContact CD2-CG 4.36Å
70V88.5Confident75Confident37 Ų3786.6 Ų86.622%0.22450%0.503CS..EExtended strand (participates in β ladder)trans-115.9149.4170.2-51.40000111.1L8 R42 I44L8-V70 HydrophobicContact CD1-CB 3.95Å; L8-V70 HydrophobicContact CD1-CG1 4.38Å; L8-V70 HydrophobicContact CD2-CB 4.34Å; L8-V70 HydrophobicContact CD2-CG1 3.85Å; L8-V70 HydrophobicContact CG-CB 4.19Å; L8-V70 HydrophobicContact CG-CG1 4.14Å; R42-V70 HydrophobicContact CB-CG2 3.56Å; R42-V70 HydrophobicContact CG-CG2 3.7Å; R42-V70 PolarHBondContact N-O 3.1Å; R42-V70 PolarHBondContact O-N 3.28Å; I44-V70 HydrophobicContact CD1-CB 4.05Å; I44-V70 HydrophobicContact CD1-CG1 3.47Å; I44-V70 VanDerWaalsContact CD1-CG1 3.47Å; I44-V70 HydrophobicContact CD1-CG2 3.41Å; I44-V70 VanDerWaalsContact CD1-CG2 3.41Å
71L85.7Confident73.3Confident62 Ų6289.1 Ų89.133%0.32551%0.509SS..EExtended strand (participates in β ladder)trans-96.4127.8-179.2-70.5166.5000110L8 I36 Q40 L69 L73L8-L71 HydrophobicContact CD1-CB 4.23Å; I36-L71 HydrophobicContact CB-CD2 4.49Å; I36-L71 HydrophobicContact CD1-CD2 4Å; I36-L71 HydrophobicContact CG1-CD2 4.31Å; I36-L71 HydrophobicContact CG2-CD2 3.42Å; I36-L71 VanDerWaalsContact CG2-CD2 3.42Å; Q40-L71 WeakPolarHBondContact O-CA 3.31Å; L69-L71 HydrophobicContact CD2-CD2 4.38Å; L69-L71 HydrophobicContact CD2-CG 4.36Å; L71-L73 PolarHBondContact O-N 3.25Å
72A77.1Confident71.2Confident45 Ų4592.4 Ų92.437%0.37253%0.532SS..  trans-82.796165.600000108.5Q40 R74Q40-A72 PolarHBondContact O-N 3.14Å; A72-R74 PolarHBondContact O-N 3.22Å
73L62.6Low69.1Low164 Ų16490.3 Ų90.386%0.85953%0.532SS*.  trans-67.8100-179.8-64.5173.6000110.6L71L71-L73 PolarHBondContact O-N 3.25Å
74R53.4Low67.2Low225 Ų22593.7 Ų93.785%0.84954%0.542SS*.  trans-117.8108.7152.4-142.9177.5-166167.33.7105.4A72A72-R74 PolarHBondContact O-N 3.22Å
75G54.2Low65Low87 Ų87102.1 Ų102.190%0.89756%0.559SS**  trans-58.1145-167.200000114
76G53.9Low63.2Low61 Ų61109 Ų10963%0.62959%0.593SS**  trans127.1102.7167.500000113.5
77S56.8Low61.2Low111 Ų111110.6 Ų110.678%0.77661%0.607SS**  trans29.3119.3143.1-50.60000119.5
78E53.8Low59.6Low181 Ų181116.6 Ų116.685%0.84665%0.646SS**  -151.5102.5127.2-106.8176.311500108.3H80E78-H80 VanDerWaalsContact C-N 3.34Å; E78-H80 PolarHBondContact O-N 2.9Å
79P49.8Very low58Low111 Ų111117.5 Ų117.572%0.72166%0.663SS**  trans-68.4101163.727.8-28.9000106.3R81P79-R81 PolarHBondContact O-N 3.06Å
80H43.2Very low56.6Low142 Ų142126.7 Ų126.766%0.65773%0.728SS**  trans-67.884.3163.2-165.2-119.5000107.2E78 S82E78-H80 VanDerWaalsContact C-N 3.34Å; E78-H80 PolarHBondContact O-N 2.9Å; H80-S82 PolarHBondContact O-N 2.95Å
81R51.8Low55Low216 Ų216131.2 Ų131.282%0.81575%0.753SS**  trans-65.275.1160.2-83.5-166.7166.6-165.6-1.2107.3P79 C83P79-R81 PolarHBondContact O-N 3.06Å; R81-C83 PolarHBondContact O-N 3.22Å
82S42.5Very low53.4Low76 Ų76134.8 Ų134.853%0.53178%0.775SS.*  trans-78.273.2148.150.50000107.1H80 T84H80-S82 PolarHBondContact O-N 2.95Å; S82-T84 PolarHBondContact O-N 2.98Å
83C43.1Very low52.1Low99 Ų99139.8 Ų139.867%0.66980%0.798SS**  trans-60.287.9147.3-77.80000106.2R81 R85R81-C83 PolarHBondContact O-N 3.22Å; C83-R85 PolarHBondContact O-N 2.99Å
84T48.8Very low51.4Low125 Ų125138.4 Ų138.477%0.76779%0.794SS**  trans-68.68715320.10000105.7S82 L86S82-T84 PolarHBondContact O-N 2.98Å; T84-L86 PolarHBondContact O-N 2.8Å
85R43Very low51.3Low226 Ų226132.9 Ų132.985%0.85379%0.791SS**  trans-53.698.8158.7-157.3-176.4-72.7-125.84104.7C83 S87C83-R85 PolarHBondContact O-N 2.99Å; R85-S87 VanDerWaalsContact C-N 3.26Å; R85-S87 PolarHBondContact O-N 2.91Å
86L52.2Low51.1Low162 Ų162136 Ų13685%0.84878%0.784SS**  trans-58.899.5163.6-87.5137.8000105.5T84 P88T84-L86 PolarHBondContact O-N 2.8Å; L86-P88 WeakPolarHBondContact O-CD 3.42Å
87S51.3Low50.9Low93 Ų93141.4 Ų141.465%0.6580%0.795SS**  trans-60.4122.7164.3-50.60000107.1R85 S89R85-S87 VanDerWaalsContact C-N 3.26Å; R85-S87 PolarHBondContact O-N 2.91Å; S87-S89 PolarHBondContact O-N 3.27Å
88P56.8Low50.5Low126 Ų126143.7 Ų143.782%0.81880%0.796SS**  trans-72.3112.8162.428.9-27.8000106.9L86L86-P88 WeakPolarHBondContact O-CD 3.42Å
89S59.8Low50.2Low115 Ų115140.6 Ų140.680%0.80479%0.792SS**  trans-77.6135164.2-58.40000108.1S87S87-S89 PolarHBondContact O-N 3.27Å
90S59.8Low50.2Low196 Ų196143.3 Ų143.3100%1.37180%0.799SS**  trans-46.40-171.2-58.70000117.6

Retrieved 90 of 90 residues in 35.3 ms (Link to these results)