A0A3Q0KGK6_SCHMA Loading...

Putative lipopolysaccharide-induced transcription factor regulating tumor necrosis factor alpha

AlphaFold DB , UniProt , Accession A0A3Q0KGK6, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 104 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M36.2Very low44.9Very low243 Ų243154.5 Ų154.5100%1.19778%0.781SS**  0910-73.8162.5155.900109.5
2Q43Very low45.7Very low181 Ų181149.8 Ų149.885%0.84677%0.765SS**  trans-140.791.8152-68.5174.2-64.400100.2
3N35.6Very low46.4Very low153 Ų153152.3 Ų152.382%0.81877%0.772SS**  3264.458.5-145.616000114.4
4Q45.9Very low46.9Very low165 Ų165150 Ų15077%0.77177%0.769SS**  trans-126.187.5144-72.5-176.2-3000104.2
5S51.5Low47.2Very low68 Ų68147.2 Ų147.248%0.47676%0.764SS.*  61.1100.699.769.20000108.4K7S5-K7 PolarHBondContact O-N 3.39Å
6E46.8Very low47.6Very low169 Ų169147.6 Ų147.679%0.7977%0.767SS**  23.273.8104.9-64.9-177.5110.700111.7T8E6-T8 PolarHBondContact O-N 2.84Å
7K43.1Very low48.2Very low207 Ų207147.5 Ų147.590%0.977%0.766SS**  trans-72.163.4142.7-74.5-172.4179.8-178.90105.6S5S5-K7 PolarHBondContact O-N 3.39Å
8T46.9Very low48.8Very low88 Ų88146.8 Ų146.854%0.5477%0.769SS.*  trans-50.4144.1155-73.90000106.5E6E6-T8 PolarHBondContact O-N 2.84Å
9L52.1Low49.6Very low136 Ų136143.8 Ų143.871%0.71276%0.758SS**  trans68.282.7169.3-111.174000113.5K11L9-K11 PolarHBondContact O-N 2.71Å
10S51.3Low50Low107 Ų107144.4 Ų144.475%0.74876%0.761SS**  -6.282.5102.2165.50000111.7
11K42.2Very low50.1Low182 Ų182143.6 Ų143.679%0.79175%0.753SS**  trans-85.6131164.9-157.6-179-178.9177.80105.9L9L9-K11 PolarHBondContact O-N 2.71Å
12V54.5Low50.9Low98 Ų98137.5 Ų137.559%0.59473%0.732SS**  trans87.377169.6-152.50000113.3V14V12-V14 VanDerWaalsContact C-N 3.26Å; V12-V14 HydrophobicContact CB-CG2 4.43Å; V12-V14 HydrophobicContact CG1-CB 4.32Å; V12-V14 HydrophobicContact CG1-CG2 3.42Å; V12-V14 VanDerWaalsContact CG1-CG2 3.42Å; V12-V14 PolarHBondContact O-N 2.8Å; V12-V14 VanDerWaalsContact O-N 3.08Å
13E54.5Low51.4Low183 Ų183134.6 Ų134.686%0.85572%0.717SS**  -44106.9123.6-89.9164.7121.700106.6P15E13-P15 WeakPolarHBondContact O-CD 3.4Å
14V53.7Low52.3Low120 Ų120131.4 Ų131.473%0.72771%0.712SS**  trans-81.2104.7159.2179.80000103.8V12 L16V12-V14 VanDerWaalsContact C-N 3.26Å; V12-V14 HydrophobicContact CB-CG2 4.43Å; V12-V14 HydrophobicContact CG1-CB 4.32Å; V12-V14 HydrophobicContact CG1-CG2 3.42Å; V12-V14 VanDerWaalsContact CG1-CG2 3.42Å; V12-V14 PolarHBondContact O-N 2.8Å; V12-V14 VanDerWaalsContact O-N 3.08Å; V14-L16 PolarHBondContact O-N 3.08Å
15P50.6Low52.9Low108 Ų108134.9 Ų134.970%0.70172%0.718SS**  trans-63.3133171.328-33000108.8E13E13-P15 WeakPolarHBondContact O-CD 3.4Å
16L54Low53.5Low153 Ų153134.4 Ų134.480%0.80171%0.708SS**SBendtrans38.795.4145.1-170.177.4000117.1V14V14-L16 PolarHBondContact O-N 3.08Å
17I58Low54.6Low147 Ų147132.5 Ų132.575%0.75470%0.699SS**  -177121.4113.137.8-157.8000107.9T19I17-T19 VanDerWaalsContact C-N 3.34Å; I17-T19 PolarHBondContact O-N 2.73Å
18T58.9Low56.5Low135 Ų135124.8 Ų124.883%0.82867%0.666SS**  trans-50.694172.4-56.70000110.1
19T62.9Low58.4Low90 Ų90123.8 Ų123.855%0.55265%0.654SS**  trans-94.7119.3159.7-175.50000106.2I17 Q21I17-T19 VanDerWaalsContact C-N 3.34Å; I17-T19 PolarHBondContact O-N 2.73Å; T19-Q21 HydrophobicContact CG2-CB 4.46Å; T19-Q21 HydrophobicContact CG2-CG 3.34Å; T19-Q21 PolarHBondContact O-N 2.7Å; T19-Q21 WeakPolarHBondContact OG1-CG 3.06Å; T19-Q21 PolarHBondContact OG1-NE2 2.89Å
20N57.7Low59.7Low154 Ų154120.4 Ų120.482%0.82464%0.636SS**  trans-62.756.7164.1-83.7-73.2000108.7P22N20-P22 WeakPolarHBondContact O-CD 3.47Å
21Q52.9Low61.3Low128 Ų128122.7 Ų122.760%0.59863%0.629SS**  trans-66.5123.6167-64.9-66.9-3700104.1T19 K23T19-Q21 HydrophobicContact CG2-CB 4.46Å; T19-Q21 HydrophobicContact CG2-CG 3.34Å; T19-Q21 PolarHBondContact O-N 2.7Å; T19-Q21 WeakPolarHBondContact OG1-CG 3.06Å; T19-Q21 PolarHBondContact OG1-NE2 2.89Å; Q21-K23 WeakPolarHBondContact O-CA 3.47Å; Q21-K23 PolarHBondContact O-N 2.7Å
22P52.3Low63.4Low116 Ų116117.4 Ų117.475%0.75361%0.613SS**  trans-55.8100.4168.123.1-29.7000104.7N20 A24N20-P22 WeakPolarHBondContact O-CD 3.47Å; P22-A24 VanDerWaalsContact C-N 3.33Å; P22-A24 PolarHBondContact O-N 2.81Å
23K54.2Low64.8Low119 Ų119114.2 Ų114.252%0.51759%0.594SS.*  trans-49.2101.7-165.2-166.1-175.3-160-155.90106.2Q21 R25 E26Q21-K23 WeakPolarHBondContact O-CA 3.47Å; Q21-K23 PolarHBondContact O-N 2.7Å; K23-R25 PolarHBondContact O-N 3.37Å; K23-E26 HydrophobicContact CD-CG 4.21Å; K23-E26 WeakPolarHBondContact CE-OE1 3.37Å; K23-E26 WeakPolarHBondContact CE-OE2 3.07Å; K23-E26 HydrophobicContact CG-CG 4.23Å; K23-E26 IonicContact NZ-OE1 2.7Å; K23-E26 PolarHBondContact NZ-OE1 2.73Å; K23-E26 IonicContact NZ-OE2 3.92Å; K23-E26 PolarHBondContact NZ-OE2 3.15Å
24A54.7Low66.3Low86 Ų86111.2 Ų111.271%0.71158%0.584SS**  trans-51.7116.1-174.100000104.9P22 E26P22-A24 VanDerWaalsContact C-N 3.33Å; P22-A24 PolarHBondContact O-N 2.81Å; A24-E26 WeakPolarHBondContact O-CA 3.46Å; A24-E26 PolarHBondContact O-N 2.94Å
25R58.2Low67.9Low238 Ų238105.7 Ų105.790%0.89855%0.55SS**  trans-25.6101.9-174.9174.9179.4171.7-176.7-4.3107.9K23 E27K23-R25 PolarHBondContact O-N 3.37Å; R25-E27 VanDerWaalsContact C-N 3.31Å; R25-E27 PolarHBondContact O-N 2.83Å
26E63.6Low69.7Low58 Ų58108.6 Ų108.627%0.27155%0.547SS..  trans-56.6104.7-169.4-80.4-179142.300106.5K23 A24 F28 V35K23-E26 HydrophobicContact CD-CG 4.21Å; K23-E26 WeakPolarHBondContact CE-OE1 3.37Å; K23-E26 WeakPolarHBondContact CE-OE2 3.07Å; K23-E26 HydrophobicContact CG-CG 4.23Å; K23-E26 IonicContact NZ-OE1 2.7Å; K23-E26 PolarHBondContact NZ-OE1 2.73Å; K23-E26 IonicContact NZ-OE2 3.92Å; K23-E26 PolarHBondContact NZ-OE2 3.15Å; A24-E26 WeakPolarHBondContact O-CA 3.46Å; A24-E26 PolarHBondContact O-N 2.94Å; E26-F28 PolarHBondContact O-N 2.92Å; E26-V35 VanDerWaalsContact CD-CG1 3.49Å; E26-V35 WeakPolarHBondContact OE2-CB 3.39Å; E26-V35 WeakPolarHBondContact OE2-CG1 2.92Å
27E70.6Confident71.3Confident130 Ų130101.3 Ų101.361%0.60751%0.509SS*.  trans-71.7102.1-174.9-169.7-176.2-163.500104.8R25 K29R25-E27 VanDerWaalsContact C-N 3.31Å; R25-E27 PolarHBondContact O-N 2.83Å; E27-K29 WeakPolarHBondContact O-CG 3.45Å; E27-K29 PolarHBondContact O-N 2.8Å; E27-K29 WeakPolarHBondContact OE2-CE 3.39Å; E27-K29 IonicContact OE2-NZ 3.34Å; E27-K29 PolarHBondContact OE2-NZ 2.76Å
28F83.6Confident72.8Confident45 Ų4599.4 Ų99.420%0.19751%0.506CS..  trans-57.3134.1172.2-68.1-71.7000107.6E26 V35 H87 I96 Y99E26-F28 PolarHBondContact O-N 2.92Å; F28-V35 HydrophobicContact CE1-CG1 4.46Å; F28-H87 HydrophobicContact CD1-CB 4.05Å; F28-H87 AromaticContact CD1-CD2 3.67Å; F28-H87 AromaticContact CD1-CE1 3.78Å; F28-H87 AromaticContact CD1-CG 3.53Å; F28-H87 AromaticContact CD1-ND1 3.62Å; F28-H87 AromaticContact CD1-NE2 3.82Å; F28-H87 HydrophobicContact CE1-CB 4.15Å; F28-I96 HydrophobicContact CE1-CG2 4.05Å; F28-I96 HydrophobicContact CZ-CG2 3.67Å; F28-Y99 WeakPolarHBondContact O-CD2 3.28Å
29K85.3Confident74.3Confident66 Ų6695.4 Ų95.429%0.28748%0.484SS..  trans-130.7-178.1179.4-62-167.5-168.9-124.30107.9E27 R31 H87E27-K29 WeakPolarHBondContact O-CG 3.45Å; E27-K29 PolarHBondContact O-N 2.8Å; E27-K29 WeakPolarHBondContact OE2-CE 3.39Å; E27-K29 IonicContact OE2-NZ 3.34Å; E27-K29 PolarHBondContact OE2-NZ 2.76Å; K29-R31 HydrophobicContact CB-CG 4.18Å; K29-R31 PolarHBondContact O-N 2.73Å; K29-H87 PolarHBondContact O-CE1 3.41Å; K29-H87 PolarHBondContact O-NE2 2.93Å
30D81Confident75.8Confident65 Ų6593.1 Ų93.135%0.34847%0.471SS..SBendtrans-71.924.3175.463.8-21.4000115.6V85 Y99 R101D30-V85 HydrophobicContact CB-CG2 4.11Å; D30-Y99 HydrophobicContact CB-CD1 4.15Å; D30-Y99 HydrophobicContact CB-CE1 4.12Å; D30-R101 IonicContact OD2-CZ 3.09Å; D30-R101 IonicContact OD2-NH1 2.8Å; D30-R101 PolarHBondContact OD2-NH1 3.2Å; D30-R101 VanDerWaalsContact OD2-NH1 3.16Å; D30-R101 IonicContact OD2-NH2 3.86Å; D30-R101 PolarHBondContact OD2-NH2 3.27Å
31R84.6Confident77.3Confident155 Ų15587.2 Ų87.259%0.58545%0.447SS*.SBendtrans-136.4146.7-179.556.4178.4162.9-177.4-5.4111.7K29 T33 H87K29-R31 HydrophobicContact CB-CG 4.18Å; K29-R31 PolarHBondContact O-N 2.73Å; R31-T33 PolarHBondContact O-N 3.39Å; R31-T33 PolarHBondContact O-OG1 3.3Å; R31-H87 PolarHBondContact O-CE1 3.39Å; R31-H87 VanDerWaalsContact O-CE1 3.29Å
32P85.1Confident78.9Confident72 Ų7286.8 Ų86.847%0.46844%0.443SS..  trans-54.1132.5173.9-23.534.8000109.9S45 T46 L48P32-S45 WeakPolarHBondContact CB-OG 3.41Å; P32-T46 WeakPolarHBondContact CB-O 2.97Å; P32-L48 VanDerWaalsContact CD-CD1 3.47Å; P32-L48 HydrophobicContact CG-CD1 3.93Å; P32-L48 HydrophobicContact CG-CG 4.03Å
33T84.2Confident80.7Confident30 Ų3087.9 Ų87.918%0.18444%0.442CS..  trans-118.5137.2179.8-59.40000108.8R31 V35 T46R31-T33 PolarHBondContact O-N 3.39Å; R31-T33 PolarHBondContact O-OG1 3.3Å; T33-V35 HydrophobicContact CG2-CG1 3.67Å; T33-V35 PolarHBondContact O-N 2.8Å; T33-T46 PolarHBondContact N-OG1 2.94Å; T33-T46 PolarHBondContact O-N 3.47Å; T33-T46 PolarHBondContact O-OG1 2.93Å
34N87Confident82.3Confident121 Ų12183 Ų8365%0.64742%0.422SS*.EExtended strand (participates in β ladder)trans-80.2107175.9-77-60.6000108.9I44 S45N34-I44 WeakPolarHBondContact CA-O 3.18Å; N34-S45 WeakPolarHBondContact OD1-CB 3.47Å
35V86.1Confident84Confident4 Ų481.5 Ų81.52%0.02441%0.406CS..EExtended strand (participates in β ladder)trans-129.8155-177.6-50.40000109.4E26 F28 T33 C37 I44 T46 I96E26-V35 VanDerWaalsContact CD-CG1 3.49Å; E26-V35 WeakPolarHBondContact OE2-CB 3.39Å; E26-V35 WeakPolarHBondContact OE2-CG1 2.92Å; F28-V35 HydrophobicContact CE1-CG1 4.46Å; T33-V35 HydrophobicContact CG2-CG1 3.67Å; T33-V35 PolarHBondContact O-N 2.8Å; V35-C37 PolarHBondContact O-N 3.38Å; V35-I44 HydrophobicContact CG2-CD1 3.97Å; V35-I44 PolarHBondContact N-O 3.5Å; V35-I44 PolarHBondContact O-N 3.06Å; V35-I44 VanDerWaalsContact O-O 3.05Å; V35-T46 HydrophobicContact CG2-CG2 3.61Å; V35-I96 HydrophobicContact CG2-CG2 4.28Å
36R89.2Confident85.5Confident168 Ų16870.3 Ų70.363%0.63436%0.364SS*.EExtended strand (participates in β ladder)trans-84.3113.9169.3-168.6174.6-177.8-156.3-0.7107.8G41 N43R36-G41 WeakPolarHBondContact CG-O 3.46Å; R36-G41 PolarHBondContact NE-O 2.79Å; R36-N43 WeakPolarHBondContact CB-OD1 3.48Å; R36-N43 WeakPolarHBondContact CG-OD1 3.39Å
37C88.2Confident86.9Confident1 Ų171.9 Ų71.91%0.00737%0.371CS..  trans-61.5125.7-179173.80000109.9V35 S39 C40 G41 K42 I44 C89 I96V35-C37 PolarHBondContact O-N 3.38Å; C37-S39 PolarHBondContact O-N 3.3Å; C37-S39 PolarHBondContact SG-N 3.46Å; C37-S39 VanDerWaalsContact SG-N 3.41Å; C37-C40 WeakPolarHBondContact CB-SG 3.36Å; C37-C40 PolarHBondContact SG-N 3.06Å; C37-G41 WeakPolarHBondContact O-CA 3.17Å; C37-G41 PolarHBondContact O-N 2.87Å; C37-K42 PolarHBondContact N-O 2.94Å; C37-I44 HydrophobicContact CB-CG1 3.96Å; C37-C89 HydrophobicContact CB-CB 4.47Å; C37-I96 HydrophobicContact CB-CD1 4.36Å
38P87.9Confident87.8Confident106 Ų10667 Ų6769%0.68835%0.349SS*.THydrogen-bonded Turntrans-68.9-16.8-17928.2-34.7000112.7
39S91.9Very high88.1Confident51 Ų5168.5 Ų68.536%0.35736%0.357SS..THydrogen-bonded Turntrans-98.4-30.1-175.1-63.40000114.6C37 R94C37-S39 PolarHBondContact O-N 3.3Å; C37-S39 PolarHBondContact SG-N 3.46Å; C37-S39 VanDerWaalsContact SG-N 3.41Å; S39-R94 VanDerWaalsContact CB-CD 3.48Å; S39-R94 VanDerWaalsContact CB-NH1 3.31Å; S39-R94 WeakPolarHBondContact OG-CD 3.33Å; S39-R94 PolarHBondContact OG-NH1 3.41Å
40C93Very high88.2Confident43 Ų4370 Ų7029%0.29136%0.362SS..THydrogen-bonded Turntrans-114-9.2174.3700000113.7C37 K42 C92C37-C40 WeakPolarHBondContact CB-SG 3.36Å; C37-C40 PolarHBondContact SG-N 3.06Å; C40-K42 PolarHBondContact O-N 2.87Å; C40-K42 VanDerWaalsContact O-N 3.15Å; C40-C92 HydrophobicContact CB-CB 4.31Å
41G89.1Confident88.4Confident30 Ų3069.7 Ų69.731%0.30936%0.358SS..  trans71.21.9178.700000115.3R36 C37R36-G41 WeakPolarHBondContact CG-O 3.46Å; R36-G41 PolarHBondContact NE-O 2.79Å; C37-G41 WeakPolarHBondContact O-CA 3.17Å; C37-G41 PolarHBondContact O-N 2.87Å
42K87.3Confident88.2Confident119 Ų11965.3 Ų65.352%0.51735%0.346SS..  trans-84.6144.5179.5-59.6-178.9-170.8175.90111C37 C40 I44 S91C37-K42 PolarHBondContact N-O 2.94Å; C40-K42 PolarHBondContact O-N 2.87Å; C40-K42 VanDerWaalsContact O-N 3.15Å; K42-I44 HydrophobicContact CB-CG2 4.04Å; K42-I44 PolarHBondContact O-N 2.85Å; K42-S91 PolarHBondContact NZ-OG 2.93Å
43N90.3Very high88.2Confident139 Ų13962.2 Ų62.274%0.74333%0.327SS*.EExtended strand (participates in β ladder)trans-74.1115.7167.6-68.3-22.9000108.1R36R36-N43 WeakPolarHBondContact CB-OD1 3.48Å; R36-N43 WeakPolarHBondContact CG-OD1 3.39Å
44I87.6Confident88.1Confident16 Ų1665.8 Ų65.88%0.08235%0.345CS..EExtended strand (participates in β ladder)trans-131.1152.6-175.857.282000109.7N34 V35 C37 K42 T46 C89 P90N34-I44 WeakPolarHBondContact CA-O 3.18Å; V35-I44 HydrophobicContact CG2-CD1 3.97Å; V35-I44 PolarHBondContact N-O 3.5Å; V35-I44 PolarHBondContact O-N 3.06Å; V35-I44 VanDerWaalsContact O-O 3.05Å; C37-I44 HydrophobicContact CB-CG1 3.96Å; K42-I44 HydrophobicContact CB-CG2 4.04Å; K42-I44 PolarHBondContact O-N 2.85Å; I44-T46 HydrophobicContact CD1-CG2 3.83Å; I44-C89 HydrophobicContact CD1-CB 4.43Å; I44-P90 HydrophobicContact CB-CG 4.29Å
45S89.9Confident87.8Confident55 Ų5562.1 Ų62.139%0.38533%0.325SS..EExtended strand (participates in β ladder)trans-86.9120.5161.1-173.60000107.6P32 N34 Q47 P90P32-S45 WeakPolarHBondContact CB-OG 3.41Å; N34-S45 WeakPolarHBondContact OD1-CB 3.47Å; S45-Q47 PolarHBondContact O-N 3.33Å; S45-P90 WeakPolarHBondContact O-CD 3.47Å; S45-P90 WeakPolarHBondContact O-CG 3.42Å
46T90.4Very high87.6Confident2 Ų261.9 Ų61.91%0.01232%0.324CS..PPolyproline II helixtrans-61.4134.7-179.356.30000110.8P32 T33 V35 I44 H87 K88 I96P32-T46 WeakPolarHBondContact CB-O 2.97Å; T33-T46 PolarHBondContact N-OG1 2.94Å; T33-T46 PolarHBondContact O-N 3.47Å; T33-T46 PolarHBondContact O-OG1 2.93Å; V35-T46 HydrophobicContact CG2-CG2 3.61Å; I44-T46 HydrophobicContact CD1-CG2 3.83Å; T46-H87 HydrophobicContact CG2-CB 3.97Å; T46-H87 PolarHBondContact OG1-ND1 3.03Å; T46-K88 CarbonylContact C-O 3.5Å; T46-K88 WeakPolarHBondContact CA-O 3.36Å; T46-I96 HydrophobicContact CG2-CG1 4.49Å
47Q91.9Very high87.4Confident91 Ų9160.2 Ų60.243%0.42532%0.318SS..EExtended strand (participates in β ladder)trans-76.2136.2166.8-168.3-153.166.600109S45 H87 K88S45-Q47 PolarHBondContact O-N 3.33Å; Q47-H87 WeakPolarHBondContact O-CA 3.43Å; Q47-K88 PolarHBondContact N-O 3.45Å; Q47-K88 PolarHBondContact O-N 3.2Å
48L90.4Very high87.1Confident27 Ų2762.5 Ų62.514%0.14134%0.337CS..EExtended strand (participates in β ladder)trans-95.9127.4176.4-56.9179.4000110.7P32 Y50 V85 D86 H87P32-L48 VanDerWaalsContact CD-CD1 3.47Å; P32-L48 HydrophobicContact CG-CD1 3.93Å; P32-L48 HydrophobicContact CG-CG 4.03Å; L48-Y50 HydrophobicContact CB-CE2 4.19Å; L48-V85 HydrophobicContact CB-CG1 3.73Å; L48-V85 HydrophobicContact CD1-CG1 4.04Å; L48-V85 HydrophobicContact CD2-CG1 3.49Å; L48-V85 VanDerWaalsContact CD2-CG1 3.49Å; L48-V85 HydrophobicContact CG-CG1 3.92Å; L48-D86 CarbonylContact C-O 3.56Å; L48-D86 WeakPolarHBondContact CA-O 3.25Å; L48-H87 WeakPolarHBondContact CD2-CE1 3.33Å; L48-H87 WeakPolarHBondContact CD2-ND1 3.26Å
49E90.1Very high86.9Confident78 Ų7858.8 Ų58.836%0.36432%0.315SS..EExtended strand (participates in β ladder)trans-110.4131.1165.8-69.7-171.1-166.400109.8V85 D86 K88E49-V85 CarbonylContact O-C 3.56Å; E49-V85 WeakPolarHBondContact O-CA 3.36Å; E49-D86 HydrophobicContact CB-CB 4.36Å; E49-D86 PolarHBondContact N-O 3.09Å; E49-D86 PolarHBondContact O-N 3.12Å; E49-K88 VanDerWaalsContact CD-CE 3.46Å; E49-K88 HydrophobicContact CG-CD 4.46Å; E49-K88 WeakPolarHBondContact OE1-CD 3.18Å; E49-K88 WeakPolarHBondContact OE1-CE 3.06Å; E49-K88 IonicContact OE1-NZ 3.79Å; E49-K88 PolarHBondContact OE1-NZ 2.99Å; E49-K88 VanDerWaalsContact OE2-CE 3.25Å; E49-K88 WeakPolarHBondContact OE2-CE 3.28Å; E49-K88 IonicContact OE2-NZ 2.85Å; E49-K88 PolarHBondContact OE2-NZ 3.47Å
50Y87.2Confident86.4Confident97 Ų9757.5 Ų57.538%0.3831%0.306SS..EExtended strand (participates in β ladder)trans-99.9124.8-176.9-63.1-93.3000110.2L48 K80 K83 D84 V85L48-Y50 HydrophobicContact CB-CE2 4.19Å; Y50-K80 HydrophobicContact CD1-CB 4.35Å; Y50-K80 HydrophobicContact CE1-CB 4.46Å; Y50-K83 HydrophobicContact CD1-CB 4.42Å; Y50-D84 WeakPolarHBondContact CA-O 3.27Å; Y50-V85 HydrophobicContact CD1-CG2 3.77Å; Y50-V85 HydrophobicContact CE1-CG2 3.73Å
51H84.7Confident86Confident58 Ų5860.4 Ų60.427%0.26932%0.318SS..EExtended strand (participates in β ladder)trans-123.4154.1176.867.1-97.6000111.9G53 K83 D84 D86 H100H51-G53 PolarHBondContact O-N 3.29Å; H51-G53 VanDerWaalsContact O-N 3.1Å; H51-K83 WeakPolarHBondContact O-CA 2.97Å; H51-K83 WeakPolarHBondContact O-CB 3.2Å; H51-D84 PolarHBondContact N-O 2.97Å; H51-D84 VanDerWaalsContact NE2-CB 3.27Å; H51-D84 WeakPolarHBondContact NE2-CB 3.36Å; H51-D84 IonicContact NE2-OD2 3.38Å; H51-D84 PolarHBondContact O-N 3.11Å; H51-D86 VanDerWaalsContact CE1-CG 3.47Å; H51-D86 IonicContact CE1-OD1 3.16Å; H51-D86 PolarHBondContact CE1-OD1 2.86Å; H51-D86 IonicContact CE1-OD2 2.76Å; H51-D86 PolarHBondContact CE1-OD2 2.82Å; H51-D86 IonicContact CG-OD2 3.83Å; H51-D86 VanDerWaalsContact ND1-CG 3.27Å; H51-D86 IonicContact ND1-OD1 2.83Å; H51-D86 PolarHBondContact ND1-OD1 3.15Å; H51-D86 IonicContact ND1-OD2 2.61Å; H51-D86 PolarHBondContact ND1-OD2 3.34Å; H51-H100 AromaticContact NE2-CE1 3.75Å
52N81.7Confident85.9Confident64 Ų6460 Ų6034%0.34231%0.314SS..  trans-76.1102.8-177.3-62.1-8.6000109.5T56 K83N52-T56 HydrophobicContact CB-CG2 4.21Å; N52-K83 WeakPolarHBondContact OD1-CD 3.37Å; N52-K83 WeakPolarHBondContact OD1-CE 3.35Å; N52-K83 PolarHBondContact OD1-NZ 3.4Å
53G83.6Confident85.6Confident7 Ų756.3 Ų56.37%0.07230%0.299CS..  trans-93.6-171.4177.800000113.9H51 L55 T56 Y57 D84H51-G53 PolarHBondContact O-N 3.29Å; H51-G53 VanDerWaalsContact O-N 3.1Å; G53-L55 VanDerWaalsContact C-N 3.26Å; G53-L55 PolarHBondContact O-N 3.16Å; G53-T56 WeakPolarHBondContact O-CB 3.48Å; G53-T56 PolarHBondContact O-N 2.81Å; G53-Y57 WeakPolarHBondContact O-CD2 3.41Å; G53-Y57 PolarHBondContact O-N 3.33Å; G53-D84 VanDerWaalsContact CA-OD2 3.3Å; G53-D84 WeakPolarHBondContact CA-OD2 3.2Å
54L81.7Confident85.2Confident105 Ų10556.7 Ų56.755%0.5529%0.294SS..Hα-helixtrans-56.6-38.5-178.4-175.560.7000112.8T56 Y57 A58 I102L54-T56 VanDerWaalsContact C-N 3.27Å; L54-T56 PolarHBondContact O-N 2.86Å; L54-Y57 PolarHBondContact O-N 3.44Å; L54-A58 PolarHBondContact O-N 2.76Å; L54-I102 HydrophobicContact CD2-CG2 3.93Å
55L82.1Confident85Confident43 Ų4362 Ų6223%0.22532%0.322CS..Hα-helixtrans-60.3-36.3177175.758.6000112.5G53 A58 A59 C82 R101 I102G53-L55 VanDerWaalsContact C-N 3.26Å; G53-L55 PolarHBondContact O-N 3.16Å; L55-A58 PolarHBondContact O-N 2.76Å; L55-A59 WeakPolarHBondContact O-CB 3.34Å; L55-A59 PolarHBondContact O-N 2.92Å; L55-C82 HydrophobicContact CD2-CB 4.45Å; L55-C82 HydrophobicContact CG-CB 4.2Å; L55-R101 HydrophobicContact CD2-CB 3.9Å; L55-I102 HydrophobicContact CB-CD1 3.81Å; L55-I102 HydrophobicContact CB-CG1 4.07Å; L55-I102 HydrophobicContact CD1-CD1 3.56Å; L55-I102 HydrophobicContact CD1-CG1 4.43Å; L55-I102 HydrophobicContact CG-CD1 4.15Å
56T82Confident84.7Confident0 Ų068.4 Ų68.40%034%0.343CS..Hα-helixtrans-64-44.4177.7-55.40000109.8N52 G53 L54 C60 F77 C82N52-T56 HydrophobicContact CB-CG2 4.21Å; G53-T56 WeakPolarHBondContact O-CB 3.48Å; G53-T56 PolarHBondContact O-N 2.81Å; L54-T56 VanDerWaalsContact C-N 3.27Å; L54-T56 PolarHBondContact O-N 2.86Å; T56-C60 PolarHBondContact O-N 3.41Å; T56-C60 VanDerWaalsContact O-N 3.13Å; T56-C60 PolarHBondContact O-SG 3.37Å; T56-F77 HydrophobicContact CG2-CD1 3.97Å; T56-F77 HydrophobicContact CG2-CE1 3.95Å; T56-C82 PolarHBondContact N-O 3.24Å; T56-C82 PolarHBondContact OG1-O 3.1Å
57Y83.7Confident84Confident133 Ų13371.3 Ų71.352%0.52237%0.374SS..Hα-helixtrans-66.8-44177-64.9-77.3000112.8G53 L54 A59 C60 I61G53-Y57 WeakPolarHBondContact O-CD2 3.41Å; G53-Y57 PolarHBondContact O-N 3.33Å; L54-Y57 PolarHBondContact O-N 3.44Å; Y57-A59 VanDerWaalsContact C-N 3.34Å; Y57-A59 PolarHBondContact O-N 2.92Å; Y57-C60 WeakPolarHBondContact O-CB 3.43Å; Y57-C60 PolarHBondContact O-N 2.94Å; Y57-I61 WeakPolarHBondContact O-CG1 3.44Å; Y57-I61 PolarHBondContact O-N 2.79Å
58A83.5Confident82.9Confident49 Ų4967.3 Ų67.341%0.40536%0.357SS..Hα-helixtrans-60.6-42.8178.100000111.9L54 L55 I61 G62L54-A58 PolarHBondContact O-N 2.76Å; L55-A58 PolarHBondContact O-N 2.76Å; A58-I61 PolarHBondContact O-N 2.57Å; A58-G62 PolarHBondContact O-N 2.52Å
59A82.8Confident81.7Confident28 Ų2870.2 Ų70.223%0.23139%0.385CS..Hα-helixtrans-63.9-40.6175.700000112.1L55 Y57 G62 I63 P76L55-A59 WeakPolarHBondContact O-CB 3.34Å; L55-A59 PolarHBondContact O-N 2.92Å; Y57-A59 VanDerWaalsContact C-N 3.34Å; Y57-A59 PolarHBondContact O-N 2.92Å; A59-G62 PolarHBondContact O-N 3.02Å; A59-I63 WeakPolarHBondContact O-CG1 3.32Å; A59-I63 PolarHBondContact O-N 3.26Å; A59-P76 HydrophobicContact CB-CB 3.79Å; A59-P76 HydrophobicContact CB-CG 3.86Å
60C82.1Confident80.5Confident24 Ų2472.8 Ų72.816%0.16241%0.41CS..Hα-helixtrans-60.3-45.8174.1-69.90000112.2T56 Y57 I63 F64 F77T56-C60 PolarHBondContact O-N 3.41Å; T56-C60 VanDerWaalsContact O-N 3.13Å; T56-C60 PolarHBondContact O-SG 3.37Å; Y57-C60 WeakPolarHBondContact O-CB 3.43Å; Y57-C60 PolarHBondContact O-N 2.94Å; C60-I63 PolarHBondContact O-N 2.76Å; C60-F64 WeakPolarHBondContact O-CB 3.48Å; C60-F64 PolarHBondContact O-N 2.76Å; C60-F77 WeakPolarHBondContact SG-CE2 3.47Å
61I84.5Confident79.4Confident104 Ų10470.2 Ų70.253%0.53341%0.413SS..Hα-helixtrans-62.9-46177.6-66.5165.8000110.4Y57 A58 I63 F64 L65Y57-I61 WeakPolarHBondContact O-CG1 3.44Å; Y57-I61 PolarHBondContact O-N 2.79Å; A58-I61 PolarHBondContact O-N 2.57Å; I61-I63 PolarHBondContact O-N 2.88Å; I61-F64 WeakPolarHBondContact O-CB 3.4Å; I61-F64 PolarHBondContact O-N 2.96Å; I61-L65 HydrophobicContact CG2-CD1 3.98Å; I61-L65 HydrophobicContact CG2-CG 4.31Å; I61-L65 WeakPolarHBondContact O-CG 3.49Å; I61-L65 PolarHBondContact O-N 3.04Å
62G85.4Confident78.5Confident22 Ų2269.5 Ų69.523%0.22741%0.414CS..Hα-helixtrans-55.7-52.2177.400000111.7A58 A59 F64 L65 F66A58-G62 PolarHBondContact O-N 2.52Å; A59-G62 PolarHBondContact O-N 3.02Å; G62-F64 VanDerWaalsContact C-N 3.29Å; G62-F64 PolarHBondContact O-N 2.85Å; G62-L65 PolarHBondContact O-N 2.85Å; G62-L65 VanDerWaalsContact O-N 3.15Å; G62-F66 WeakPolarHBondContact O-CD2 3.47Å; G62-F66 PolarHBondContact O-N 2.73Å
63I82.5Confident77.5Confident40 Ų4068.8 Ų68.821%0.20541%0.414CS..Hα-helixtrans-59.9-41.2178.5-67.1174.2000111.6A59 C60 I61 L65 F66 G68 C72 P76A59-I63 WeakPolarHBondContact O-CG1 3.32Å; A59-I63 PolarHBondContact O-N 3.26Å; C60-I63 PolarHBondContact O-N 2.76Å; I61-I63 PolarHBondContact O-N 2.88Å; I63-L65 VanDerWaalsContact C-N 3.34Å; I63-L65 PolarHBondContact O-N 2.96Å; I63-F66 PolarHBondContact O-N 3.09Å; I63-G68 VanDerWaalsContact O-CA 3.28Å; I63-G68 WeakPolarHBondContact O-CA 3.06Å; I63-G68 PolarHBondContact O-N 2.99Å; I63-C72 HydrophobicContact CG2-CB 4.29Å; I63-C72 VanDerWaalsContact CG2-SG 3.54Å; I63-P76 VanDerWaalsContact CD1-CD 3.49Å; I63-P76 HydrophobicContact CD1-CG 3.37Å
64F82Confident76.5Confident148 Ų14873.6 Ų73.665%0.64944%0.437SS*.Hα-helixtrans-60-44.3176.9-177.4-100.1000111.8C60 I61 G62 F66 G67C60-F64 WeakPolarHBondContact O-CB 3.48Å; C60-F64 PolarHBondContact O-N 2.76Å; I61-F64 WeakPolarHBondContact O-CB 3.4Å; I61-F64 PolarHBondContact O-N 2.96Å; G62-F64 VanDerWaalsContact C-N 3.29Å; G62-F64 PolarHBondContact O-N 2.85Å; F64-F66 PolarHBondContact O-N 3.1Å; F64-G67 PolarHBondContact O-N 2.8Å
65L83.7Confident76Confident128 Ų12873.1 Ų73.167%0.6743%0.434SS*.Hα-helixtrans-66.6-34.3178.5-68.2175.8000113.1I61 G62 I63 G67I61-L65 HydrophobicContact CG2-CD1 3.98Å; I61-L65 HydrophobicContact CG2-CG 4.31Å; I61-L65 WeakPolarHBondContact O-CG 3.49Å; I61-L65 PolarHBondContact O-N 3.04Å; G62-L65 PolarHBondContact O-N 2.85Å; G62-L65 VanDerWaalsContact O-N 3.15Å; I63-L65 VanDerWaalsContact C-N 3.34Å; I63-L65 PolarHBondContact O-N 2.96Å; L65-G67 PolarHBondContact O-N 3.34Å; L65-G67 VanDerWaalsContact O-N 3.17Å
66F82.2Confident75.2Confident188 Ų18871.3 Ų71.383%0.82543%0.425SS*.THydrogen-bonded Turntrans-81.520178.6-70.4-69.4000114G62 I63 F64 G68G62-F66 WeakPolarHBondContact O-CD2 3.47Å; G62-F66 PolarHBondContact O-N 2.73Å; I63-F66 PolarHBondContact O-N 3.09Å; F64-F66 PolarHBondContact O-N 3.1Å; F66-G68 VanDerWaalsContact C-N 3.31Å; F66-G68 PolarHBondContact O-N 2.61Å
67G75.9Confident74.4Confident63 Ų6375.1 Ų75.165%0.64944%0.442SS*.THydrogen-bonded Turntrans78.616.1176.300000113.8F64 L65 A69F64-G67 PolarHBondContact O-N 2.8Å; L65-G67 PolarHBondContact O-N 3.34Å; L65-G67 VanDerWaalsContact O-N 3.17Å; G67-A69 PolarHBondContact O-N 3.38Å
68G69.7Low73.5Confident8 Ų873.6 Ų73.68%0.08245%0.45CS..  trans-76.149.9179.800000114.6I63 F66 C72I63-G68 VanDerWaalsContact O-CA 3.28Å; I63-G68 WeakPolarHBondContact O-CA 3.06Å; I63-G68 PolarHBondContact O-N 2.99Å; F66-G68 VanDerWaalsContact C-N 3.31Å; F66-G68 PolarHBondContact O-N 2.61Å; G68-C72 VanDerWaalsContact C-SG 3.5Å; G68-C72 WeakPolarHBondContact CA-SG 3.17Å; G68-C72 PolarHBondContact O-SG 3.28Å; G68-C72 VanDerWaalsContact O-SG 3.4Å
69A65Low72.8Confident88 Ų8874.1 Ų74.173%0.72745%0.447SS*.THydrogen-bonded Turntrans-80.9-17.6176.200000112.8G67 G71G67-A69 PolarHBondContact O-N 3.38Å; A69-G71 PolarHBondContact O-N 2.83Å
70C65.2Low71.9Confident132 Ų13279.4 Ų79.489%0.89247%0.465SS*.THydrogen-bonded Turntrans-84.345-175.9-157.10000113.2C72C70-C72 VanDerWaalsContact C-N 3.33Å; C70-C72 PolarHBondContact O-N 3.14Å
71G64.1Low71.3Confident43 Ų4380.9 Ų80.944%0.44348%0.479SS..THydrogen-bonded Turntrans82-5.7173.200000116.7A69 C73 L74A69-G71 PolarHBondContact O-N 2.83Å; G71-C73 PolarHBondContact O-N 2.96Å; G71-L74 PolarHBondContact O-N 3.06Å
72C64.7Low70.5Confident42 Ų4277 Ų7728%0.28446%0.461SS..G310 helixtrans-70.7-12.5174.1560000113.6I63 G68 C70 L74 I75I63-C72 HydrophobicContact CG2-CB 4.29Å; I63-C72 VanDerWaalsContact CG2-SG 3.54Å; G68-C72 VanDerWaalsContact C-SG 3.5Å; G68-C72 WeakPolarHBondContact CA-SG 3.17Å; G68-C72 PolarHBondContact O-SG 3.28Å; G68-C72 VanDerWaalsContact O-SG 3.4Å; C70-C72 VanDerWaalsContact C-N 3.33Å; C70-C72 PolarHBondContact O-N 3.14Å; C72-L74 PolarHBondContact O-N 3.27Å; C72-L74 VanDerWaalsContact O-N 3.14Å; C72-I75 HydrophobicContact CB-CD1 3.68Å; C72-I75 HydrophobicContact CB-CG1 4.37Å; C72-I75 WeakPolarHBondContact O-CB 3.27Å; C72-I75 VanDerWaalsContact O-CG1 3.26Å; C72-I75 WeakPolarHBondContact O-CG1 3.33Å; C72-I75 PolarHBondContact O-N 3.18Å
73C60.8Low70.3Confident49 Ų4977.8 Ų77.833%0.33146%0.458SS..G310 helixtrans-61.4-15.2171.955.20000113.9G71 P76G71-C73 PolarHBondContact O-N 2.96Å; C73-P76 WeakPolarHBondContact O-CD 3.29Å
74L63.5Low70.4Confident109 Ų10976.1 Ų76.157%0.57145%0.45SS*.G310 helixtrans-83.9-15.7173.8-65.9174.1000113.4G71 C72 P76 F77 C78G71-L74 PolarHBondContact O-N 3.06Å; C72-L74 PolarHBondContact O-N 3.27Å; C72-L74 VanDerWaalsContact O-N 3.14Å; L74-P76 VanDerWaalsContact C-CD 3.49Å; L74-F77 PolarHBondContact O-N 2.99Å; L74-F77 VanDerWaalsContact O-N 3.1Å; L74-C78 PolarHBondContact O-N 3.48Å; L74-C78 VanDerWaalsContact O-N 3.09Å; L74-C78 PolarHBondContact O-SG 2.9Å; L74-C78 VanDerWaalsContact O-SG 3.33Å
75I70.5Confident70.6Confident95 Ų9569.1 Ų69.149%0.48742%0.419SS..Hα-helixtrans-57.3-44.8-178.8-59.9171.6000112C72 F77 C78 V79C72-I75 HydrophobicContact CB-CD1 3.68Å; C72-I75 HydrophobicContact CB-CG1 4.37Å; C72-I75 WeakPolarHBondContact O-CB 3.27Å; C72-I75 VanDerWaalsContact O-CG1 3.26Å; C72-I75 WeakPolarHBondContact O-CG1 3.33Å; C72-I75 PolarHBondContact O-N 3.18Å; I75-F77 VanDerWaalsContact C-N 3.26Å; I75-F77 PolarHBondContact O-N 3.44Å; I75-C78 WeakPolarHBondContact O-CB 3.35Å; I75-C78 PolarHBondContact O-N 3.34Å; I75-C78 VanDerWaalsContact O-N 3.12Å; I75-V79 HydrophobicContact CG2-CG2 4.04Å; I75-V79 VanDerWaalsContact O-CG2 3.26Å; I75-V79 WeakPolarHBondContact O-CG2 3.46Å; I75-V79 PolarHBondContact O-N 2.91Å
76P65.7Low70.9Confident5 Ų564.3 Ų64.33%0.03239%0.394CS..Hα-helixtrans-60.1-35.4177.1-2334.3000113.3A59 I63 C73 L74 C78 V79A59-P76 HydrophobicContact CB-CB 3.79Å; A59-P76 HydrophobicContact CB-CG 3.86Å; I63-P76 VanDerWaalsContact CD1-CD 3.49Å; I63-P76 HydrophobicContact CD1-CG 3.37Å; C73-P76 WeakPolarHBondContact O-CD 3.29Å; L74-P76 VanDerWaalsContact C-CD 3.49Å; P76-C78 VanDerWaalsContact C-N 3.34Å; P76-V79 PolarHBondContact O-N 3.34Å
77F65.8Low71.4Confident80 Ų8055.4 Ų55.435%0.35136%0.355SS..Hα-helixtrans-71.9-31.2178.3-71-76.4000112.5T56 C60 L74 I75 K83T56-F77 HydrophobicContact CG2-CD1 3.97Å; T56-F77 HydrophobicContact CG2-CE1 3.95Å; C60-F77 WeakPolarHBondContact SG-CE2 3.47Å; L74-F77 PolarHBondContact O-N 2.99Å; L74-F77 VanDerWaalsContact O-N 3.1Å; I75-F77 VanDerWaalsContact C-N 3.26Å; I75-F77 PolarHBondContact O-N 3.44Å; F77-K83 VanDerWaalsContact O-CE 3.28Å; F77-K83 WeakPolarHBondContact O-CE 3.3Å; F77-K83 PolarHBondContact O-NZ 3.22Å; F77-K83 VanDerWaalsContact O-NZ 3.11Å
78C64.1Low72.2Confident101 Ų10154.9 Ų54.968%0.68234%0.335SS*.Hα-helixtrans-75.5-29.7175-65.30000112.3L74 I75 P76 K80L74-C78 PolarHBondContact O-N 3.48Å; L74-C78 VanDerWaalsContact O-N 3.09Å; L74-C78 PolarHBondContact O-SG 2.9Å; L74-C78 VanDerWaalsContact O-SG 3.33Å; I75-C78 WeakPolarHBondContact O-CB 3.35Å; I75-C78 PolarHBondContact O-N 3.34Å; I75-C78 VanDerWaalsContact O-N 3.12Å; P76-C78 VanDerWaalsContact C-N 3.34Å; C78-K80 PolarHBondContact O-N 3.13Å
79V68.4Low73.3Confident59 Ų5954.5 Ų54.536%0.35833%0.331SS..  trans-85.1102.2-176.6176.80000110.2I75 P76 A81 C82I75-V79 HydrophobicContact CG2-CG2 4.04Å; I75-V79 VanDerWaalsContact O-CG2 3.26Å; I75-V79 WeakPolarHBondContact O-CG2 3.46Å; I75-V79 PolarHBondContact O-N 2.91Å; P76-V79 PolarHBondContact O-N 3.34Å; V79-A81 HydrophobicContact CG1-CB 3.62Å; V79-A81 PolarHBondContact O-N 3.18Å; V79-C82 WeakPolarHBondContact O-CB 3.46Å; V79-C82 PolarHBondContact O-N 3.47Å
80K64.7Low74.6Confident139 Ų13953.3 Ų53.360%0.60432%0.316SS*.G310 helixtrans-55.5-23.3172.3-62.6178.2-173.2172.30113.1Y50 C78 C82 K83Y50-K80 HydrophobicContact CD1-CB 4.35Å; Y50-K80 HydrophobicContact CE1-CB 4.46Å; C78-K80 PolarHBondContact O-N 3.13Å; K80-C82 PolarHBondContact O-N 3Å; K80-K83 WeakPolarHBondContact O-CB 3.05Å; K80-K83 PolarHBondContact O-N 3.29Å; K80-K83 VanDerWaalsContact O-N 3.14Å
81A68.3Low75.9Confident55 Ų5549.8 Ų49.846%0.45529%0.292SS..G310 helixtrans-68-14.1175.700000113.6V79 R101V79-A81 HydrophobicContact CG1-CB 3.62Å; V79-A81 PolarHBondContact O-N 3.18Å; A81-R101 WeakPolarHBondContact O-CD 3.27Å; A81-R101 PolarHBondContact O-NE 3.3Å
82C68.8Low77.3Confident22 Ų2250 Ų5015%0.14929%0.287CS..G310 helixtrans-91-3.7173.9-61.90000113.3L55 T56 V79 K80L55-C82 HydrophobicContact CD2-CB 4.45Å; L55-C82 HydrophobicContact CG-CB 4.2Å; T56-C82 PolarHBondContact N-O 3.24Å; T56-C82 PolarHBondContact OG1-O 3.1Å; V79-C82 WeakPolarHBondContact O-CB 3.46Å; V79-C82 PolarHBondContact O-N 3.47Å; K80-C82 PolarHBondContact O-N 3Å
83K80Confident78.7Confident39 Ų3954.7 Ų54.717%0.1730%0.304CS..SBendtrans-99.8146.7-175-64-172.1-171.2-169.20110.5Y50 H51 N52 F77 K80 R101Y50-K83 HydrophobicContact CD1-CB 4.42Å; H51-K83 WeakPolarHBondContact O-CA 2.97Å; H51-K83 WeakPolarHBondContact O-CB 3.2Å; N52-K83 WeakPolarHBondContact OD1-CD 3.37Å; N52-K83 WeakPolarHBondContact OD1-CE 3.35Å; N52-K83 PolarHBondContact OD1-NZ 3.4Å; F77-K83 VanDerWaalsContact O-CE 3.28Å; F77-K83 WeakPolarHBondContact O-CE 3.3Å; F77-K83 PolarHBondContact O-NZ 3.22Å; F77-K83 VanDerWaalsContact O-NZ 3.11Å; K80-K83 WeakPolarHBondContact O-CB 3.05Å; K80-K83 PolarHBondContact O-N 3.29Å; K80-K83 VanDerWaalsContact O-N 3.14Å; K83-R101 WeakPolarHBondContact O-CD 3.12Å; K83-R101 PolarHBondContact O-NE 3.01Å
84D85.5Confident80.2Confident6 Ų659.5 Ų59.53%0.03232%0.316CS..EExtended strand (participates in β ladder)trans-79.1160.4171.4-69.5-17.4000109.1Y50 H51 G53 H100 R101Y50-D84 WeakPolarHBondContact CA-O 3.27Å; H51-D84 PolarHBondContact N-O 2.97Å; H51-D84 VanDerWaalsContact NE2-CB 3.27Å; H51-D84 WeakPolarHBondContact NE2-CB 3.36Å; H51-D84 IonicContact NE2-OD2 3.38Å; H51-D84 PolarHBondContact O-N 3.11Å; G53-D84 VanDerWaalsContact CA-OD2 3.3Å; G53-D84 WeakPolarHBondContact CA-OD2 3.2Å; D84-H100 WeakPolarHBondContact OD1-CA 3.34Å; D84-H100 IonicContact OD2-CE1 2.73Å; D84-H100 IonicContact OD2-CG 3.39Å; D84-H100 IonicContact OD2-ND1 2.76Å; D84-H100 PolarHBondContact OD2-ND1 3.36Å; D84-R101 PolarHBondContact OD1-N 2.88Å
85V86Confident81.6Confident0 Ų060 Ų600%031%0.31CS..EExtended strand (participates in β ladder)trans-129.2118.6-166.3-172.10000111.1D30 L48 E49 Y50 S98 Y99D30-V85 HydrophobicContact CB-CG2 4.11Å; L48-V85 HydrophobicContact CB-CG1 3.73Å; L48-V85 HydrophobicContact CD1-CG1 4.04Å; L48-V85 HydrophobicContact CD2-CG1 3.49Å; L48-V85 VanDerWaalsContact CD2-CG1 3.49Å; L48-V85 HydrophobicContact CG-CG1 3.92Å; E49-V85 CarbonylContact O-C 3.56Å; E49-V85 WeakPolarHBondContact O-CA 3.36Å; Y50-V85 HydrophobicContact CD1-CG2 3.77Å; Y50-V85 HydrophobicContact CE1-CG2 3.73Å; V85-S98 CarbonylContact O-C 3.59Å; V85-S98 WeakPolarHBondContact O-CA 3.38Å; V85-Y99 PolarHBondContact N-O 3.49Å; V85-Y99 PolarHBondContact O-N 3.48Å
86D90.9Very high82.5Confident28 Ų2857 Ų5715%0.1530%0.296CS..EExtended strand (participates in β ladder)trans-96.9131.9174.7-62.5-35000110.9L48 E49 H51 Y95 S98L48-D86 CarbonylContact C-O 3.56Å; L48-D86 WeakPolarHBondContact CA-O 3.25Å; E49-D86 HydrophobicContact CB-CB 4.36Å; E49-D86 PolarHBondContact N-O 3.09Å; E49-D86 PolarHBondContact O-N 3.12Å; H51-D86 VanDerWaalsContact CE1-CG 3.47Å; H51-D86 IonicContact CE1-OD1 3.16Å; H51-D86 PolarHBondContact CE1-OD1 2.86Å; H51-D86 IonicContact CE1-OD2 2.76Å; H51-D86 PolarHBondContact CE1-OD2 2.82Å; H51-D86 IonicContact CG-OD2 3.83Å; H51-D86 VanDerWaalsContact ND1-CG 3.27Å; H51-D86 IonicContact ND1-OD1 2.83Å; H51-D86 PolarHBondContact ND1-OD1 3.15Å; H51-D86 IonicContact ND1-OD2 2.61Å; H51-D86 PolarHBondContact ND1-OD2 3.34Å; D86-Y95 HydrophobicContact CB-CD2 4.43Å; D86-Y95 HydrophobicContact CB-CE2 4.19Å; D86-S98 WeakPolarHBondContact OD1-CB 3.37Å; D86-S98 PolarHBondContact OD1-OG 3.27Å
87H90.8Very high83.6Confident0 Ų057.2 Ų57.20%030%0.298CS..EExtended strand (participates in β ladder)trans-97.8118.1176.9-67.5-110000110.1F28 K29 R31 T46 Q47 L48 I96 G97F28-H87 HydrophobicContact CD1-CB 4.05Å; F28-H87 AromaticContact CD1-CD2 3.67Å; F28-H87 AromaticContact CD1-CE1 3.78Å; F28-H87 AromaticContact CD1-CG 3.53Å; F28-H87 AromaticContact CD1-ND1 3.62Å; F28-H87 AromaticContact CD1-NE2 3.82Å; F28-H87 HydrophobicContact CE1-CB 4.15Å; K29-H87 PolarHBondContact O-CE1 3.41Å; K29-H87 PolarHBondContact O-NE2 2.93Å; R31-H87 PolarHBondContact O-CE1 3.39Å; R31-H87 VanDerWaalsContact O-CE1 3.29Å; T46-H87 HydrophobicContact CG2-CB 3.97Å; T46-H87 PolarHBondContact OG1-ND1 3.03Å; Q47-H87 WeakPolarHBondContact O-CA 3.43Å; L48-H87 WeakPolarHBondContact CD2-CE1 3.33Å; L48-H87 WeakPolarHBondContact CD2-ND1 3.26Å; H87-I96 HydrophobicContact CB-CB 4.42Å; H87-I96 WeakPolarHBondContact O-CB 3.44Å; H87-I96 PolarHBondContact O-N 3.33Å; H87-G97 WeakPolarHBondContact CA-O 3.49Å; H87-G97 WeakPolarHBondContact CB-O 3.48Å; H87-G97 PolarHBondContact N-O 3.14Å
88K93.2Very high84.6Confident52 Ų5254.9 Ų54.923%0.22629%0.292CS..EExtended strand (participates in β ladder)trans-118151.3175.2-62-173.4-173171.20111.5T46 Q47 E49 R94T46-K88 CarbonylContact C-O 3.5Å; T46-K88 WeakPolarHBondContact CA-O 3.36Å; Q47-K88 PolarHBondContact N-O 3.45Å; Q47-K88 PolarHBondContact O-N 3.2Å; E49-K88 VanDerWaalsContact CD-CE 3.46Å; E49-K88 HydrophobicContact CG-CD 4.46Å; E49-K88 WeakPolarHBondContact OE1-CD 3.18Å; E49-K88 WeakPolarHBondContact OE1-CE 3.06Å; E49-K88 IonicContact OE1-NZ 3.79Å; E49-K88 PolarHBondContact OE1-NZ 2.99Å; E49-K88 VanDerWaalsContact OE2-CE 3.25Å; E49-K88 WeakPolarHBondContact OE2-CE 3.28Å; E49-K88 IonicContact OE2-NZ 2.85Å; E49-K88 PolarHBondContact OE2-NZ 3.47Å; K88-R94 WeakPolarHBondContact CA-O 3.5Å
89C93Very high85.6Confident1 Ų153.2 Ų53.21%0.00727%0.271CS..  trans-75.9125.1173.2175.90000110.4C37 I44 S91 C92 H93 R94 I96C37-C89 HydrophobicContact CB-CB 4.47Å; I44-C89 HydrophobicContact CD1-CB 4.43Å; C89-S91 VanDerWaalsContact C-N 3.25Å; C89-S91 PolarHBondContact O-N 3.48Å; C89-S91 PolarHBondContact SG-N 3.33Å; C89-S91 VanDerWaalsContact SG-N 3.37Å; C89-C92 VanDerWaalsContact CB-SG 3.52Å; C89-C92 PolarHBondContact SG-N 3.01Å; C89-C92 VanDerWaalsContact SG-N 3.41Å; C89-C92 PolarHBondContact SG-SG 3.4Å; C89-H93 WeakPolarHBondContact O-CA 3.38Å; C89-H93 PolarHBondContact O-N 3.21Å; C89-R94 PolarHBondContact N-O 2.97Å; C89-I96 HydrophobicContact CB-CD1 4.13Å; C89-I96 HydrophobicContact CB-CG1 4.46Å
90P92.9Very high86.3Confident62 Ų6253.4 Ų53.440%0.40327%0.269SS..THydrogen-bonded Turntrans-70.9-19.7177.330-35.9000113.3I44 S45I44-P90 HydrophobicContact CB-CG 4.29Å; S45-P90 WeakPolarHBondContact O-CD 3.47Å; S45-P90 WeakPolarHBondContact O-CG 3.42Å
91S92.9Very high87Confident58 Ų5850 Ų5041%0.40625%0.252SS..THydrogen-bonded Turntrans-86.5-33.8-179.7179.60000113.3K42 C89K42-S91 PolarHBondContact NZ-OG 2.93Å; C89-S91 VanDerWaalsContact C-N 3.25Å; C89-S91 PolarHBondContact O-N 3.48Å; C89-S91 PolarHBondContact SG-N 3.33Å; C89-S91 VanDerWaalsContact SG-N 3.37Å
92C93.4Very high87.3Confident49 Ų4951.1 Ų51.133%0.33125%0.249SC..THydrogen-bonded Turntrans-124.61.7-176.272.50000113.6C40 C89 R94C40-C92 HydrophobicContact CB-CB 4.31Å; C89-C92 VanDerWaalsContact CB-SG 3.52Å; C89-C92 PolarHBondContact SG-N 3.01Å; C89-C92 VanDerWaalsContact SG-N 3.41Å; C89-C92 PolarHBondContact SG-SG 3.4Å; C92-R94 PolarHBondContact O-N 3.03Å
93H92.7Very high87.3Confident140 Ų14052.6 Ų52.665%0.64827%0.269SS*.  trans56.115.4179.5-56.290.6000115.1C89C89-H93 WeakPolarHBondContact O-CA 3.38Å; C89-H93 PolarHBondContact O-N 3.21Å
94R93.9Very high86.3Confident150 Ų15061.6 Ų61.657%0.56632%0.318SS*.  trans-85.4138.9179.9-163.2176.9-83-171.2-5.6110.2S39 K88 C89 C92S39-R94 VanDerWaalsContact CB-CD 3.48Å; S39-R94 VanDerWaalsContact CB-NH1 3.31Å; S39-R94 WeakPolarHBondContact OG-CD 3.33Å; S39-R94 PolarHBondContact OG-NH1 3.41Å; K88-R94 WeakPolarHBondContact CA-O 3.5Å; C89-R94 PolarHBondContact N-O 2.97Å; C92-R94 PolarHBondContact O-N 3.03Å
95Y91.7Very high86.3Confident118 Ų11864.4 Ų64.446%0.46333%0.333SS..EExtended strand (participates in β ladder)trans-63.6139.1173.8174.3-95.8000111.5D86 G97 S98D86-Y95 HydrophobicContact CB-CD2 4.43Å; D86-Y95 HydrophobicContact CB-CE2 4.19Å; Y95-G97 VanDerWaalsContact CE2-C 3.44Å; Y95-G97 VanDerWaalsContact CE2-O 3.29Å; Y95-G97 WeakPolarHBondContact CE2-O 3.04Å; Y95-G97 VanDerWaalsContact CZ-CA 3.45Å; Y95-G97 WeakPolarHBondContact OH-CA 3.34Å; Y95-S98 WeakPolarHBondContact CE2-OG 3.34Å; Y95-S98 VanDerWaalsContact CZ-OG 3.24Å; Y95-S98 VanDerWaalsContact OH-CB 3.27Å; Y95-S98 WeakPolarHBondContact OH-CB 3.44Å; Y95-S98 PolarHBondContact OH-N 3.36Å; Y95-S98 PolarHBondContact OH-OG 3.17Å
96I90.3Very high86.3Confident34 Ų3467.7 Ų67.717%0.17435%0.35CS..EExtended strand (participates in β ladder)trans-114.8-41.7-176.6-50-65.9000110.6F28 V35 C37 T46 H87 C89F28-I96 HydrophobicContact CE1-CG2 4.05Å; F28-I96 HydrophobicContact CZ-CG2 3.67Å; V35-I96 HydrophobicContact CG2-CG2 4.28Å; C37-I96 HydrophobicContact CB-CD1 4.36Å; T46-I96 HydrophobicContact CG2-CG1 4.49Å; H87-I96 HydrophobicContact CB-CB 4.42Å; H87-I96 WeakPolarHBondContact O-CB 3.44Å; H87-I96 PolarHBondContact O-N 3.33Å; C89-I96 HydrophobicContact CB-CD1 4.13Å; C89-I96 HydrophobicContact CB-CG1 4.46Å
97G88.5Confident86.1Confident9 Ų969.9 Ų69.99%0.09336%0.361CS..EExtended strand (participates in β ladder)trans178167.3-178.800000111.6H87 Y95H87-G97 WeakPolarHBondContact CA-O 3.49Å; H87-G97 WeakPolarHBondContact CB-O 3.48Å; H87-G97 PolarHBondContact N-O 3.14Å; Y95-G97 VanDerWaalsContact CE2-C 3.44Å; Y95-G97 VanDerWaalsContact CE2-O 3.29Å; Y95-G97 WeakPolarHBondContact CE2-O 3.04Å; Y95-G97 VanDerWaalsContact CZ-CA 3.45Å; Y95-G97 WeakPolarHBondContact OH-CA 3.34Å
98S86.3Confident85.8Confident30 Ų3074.1 Ų74.121%0.2138%0.383CS..EExtended strand (participates in β ladder)trans-121.2153175.9-62.20000109.5V85 D86 Y95V85-S98 CarbonylContact O-C 3.59Å; V85-S98 WeakPolarHBondContact O-CA 3.38Å; D86-S98 WeakPolarHBondContact OD1-CB 3.37Å; D86-S98 PolarHBondContact OD1-OG 3.27Å; Y95-S98 WeakPolarHBondContact CE2-OG 3.34Å; Y95-S98 VanDerWaalsContact CZ-OG 3.24Å; Y95-S98 VanDerWaalsContact OH-CB 3.27Å; Y95-S98 WeakPolarHBondContact OH-CB 3.44Å; Y95-S98 PolarHBondContact OH-N 3.36Å; Y95-S98 PolarHBondContact OH-OG 3.17Å
99Y85.4Confident85.3Confident66 Ų6675.4 Ų75.426%0.25939%0.392SS..EExtended strand (participates in β ladder)trans-117.4108.2167174.5-112.7000108.3F28 D30 V85 R101F28-Y99 WeakPolarHBondContact O-CD2 3.28Å; D30-Y99 HydrophobicContact CB-CD1 4.15Å; D30-Y99 HydrophobicContact CB-CE1 4.12Å; V85-Y99 PolarHBondContact N-O 3.49Å; V85-Y99 PolarHBondContact O-N 3.48Å; Y99-R101 HydrophobicContact CD1-CG 4.27Å; Y99-R101 HydrophobicContact CE1-CG 3.72Å
100H82.9Confident84.8Confident64 Ų6480.4 Ų80.430%0.29642%0.418SS..  trans-89.1128.4171-64-72.5000108.7H51 D84 I102 G103H51-H100 AromaticContact NE2-CE1 3.75Å; D84-H100 WeakPolarHBondContact OD1-CA 3.34Å; D84-H100 IonicContact OD2-CE1 2.73Å; D84-H100 IonicContact OD2-CG 3.39Å; D84-H100 IonicContact OD2-ND1 2.76Å; D84-H100 PolarHBondContact OD2-ND1 3.36Å; H100-I102 VanDerWaalsContact C-N 3.3Å; H100-G103 WeakPolarHBondContact CB-O 3.26Å
101R79.1Confident84.3Confident66 Ų6681.7 Ų81.725%0.24942%0.419CS..SBendtrans-76.4-24.9179.1-67.5-178.2-179.7-90.87.4112.1D30 L55 A81 K83 D84 Y99D30-R101 IonicContact OD2-CZ 3.09Å; D30-R101 IonicContact OD2-NH1 2.8Å; D30-R101 PolarHBondContact OD2-NH1 3.2Å; D30-R101 VanDerWaalsContact OD2-NH1 3.16Å; D30-R101 IonicContact OD2-NH2 3.86Å; D30-R101 PolarHBondContact OD2-NH2 3.27Å; L55-R101 HydrophobicContact CD2-CB 3.9Å; A81-R101 WeakPolarHBondContact O-CD 3.27Å; A81-R101 PolarHBondContact O-NE 3.3Å; K83-R101 WeakPolarHBondContact O-CD 3.12Å; K83-R101 PolarHBondContact O-NE 3.01Å; D84-R101 PolarHBondContact OD1-N 2.88Å; Y99-R101 HydrophobicContact CD1-CG 4.27Å; Y99-R101 HydrophobicContact CE1-CG 3.72Å
102I76.2Confident83.6Confident79 Ų7983.5 Ų83.541%0.40542%0.42SS..SBendtrans-140.4123.6177.1-62.3-172.8000107.8L54 L55 H100L54-I102 HydrophobicContact CD2-CG2 3.93Å; L55-I102 HydrophobicContact CB-CD1 3.81Å; L55-I102 HydrophobicContact CB-CG1 4.07Å; L55-I102 HydrophobicContact CD1-CD1 3.56Å; L55-I102 HydrophobicContact CD1-CG1 4.43Å; L55-I102 HydrophobicContact CG-CD1 4.15Å; H100-I102 VanDerWaalsContact C-N 3.3Å
103G68.5Low82.8Confident54 Ų5486.4 Ų86.456%0.55743%0.428SS*.  trans93.1151.1-173.600000111.8H100H100-G103 WeakPolarHBondContact CB-O 3.26Å
104D58Low81.9Confident227 Ų22781.5 Ų81.5100%1.21441%0.408SS*.  trans-79.90179.3-66.9-61.7000112.8

Retrieved 104 of 104 residues in 73.5 ms (Link to these results)