A0A5K4F4A6_SCHMA Loading...

Single-stranded DNA-binding protein

AlphaFold DB , UniProt , Accession A0A5K4F4A6, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 91 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M27.2Very low26.6Very low233 Ų233157.8 Ų157.8100%1.14882%0.823SS**  0117.10-85.6178.3167.400107.5
2N22.5Very low26.8Very low161 Ų161155.8 Ų155.886%0.86181%0.806SS**  trans-97.9108.6-175.1-72.1-6.4000109.8V4N2-V4 PolarHBondContact O-N 3.24Å
3T26.1Very low27.4Very low123 Ų123150.5 Ų150.576%0.75578%0.776SS**  trans-75.1115.6173.3-37.20000109K5T3-K5 PolarHBondContact O-N 3.07Å
4V26.5Very low27.8Very low131 Ų131144.6 Ų144.679%0.79475%0.745SS**  trans-84.9106173.1-178.60000108.3N2N2-V4 PolarHBondContact O-N 3.24Å
5K25.9Very low28.6Very low190 Ų190136.3 Ų136.383%0.82670%0.702SS**  trans-86.3128169.8-76.1-179.4176.5178.10109T3T3-K5 PolarHBondContact O-N 3.07Å
6A27.4Very low29.1Very low77 Ų77133.1 Ų133.164%0.63669%0.686SS**  trans-96.9123166.800000109.5
7M25.7Very low29.6Very low174 Ų174128.6 Ų128.686%0.85766%0.662SS**  trans-107.4119166.9-93176.165.300107.6
8Y30.2Very low29.6Very low188 Ų188123.2 Ų123.274%0.73764%0.644SS**  trans-145.3150.5166.3-77.2-74.4000113.6
9N23.7Very low30Very low164 Ų164122.6 Ų122.688%0.87763%0.633SS**  trans-68.5128-164.8-143.8-10.4000112.3N11N9-N11 PolarHBondContact O-N 3.07Å; N9-N11 VanDerWaalsContact O-N 3.13Å
10L26.7Very low29.9Very low127 Ų127124.1 Ų124.167%0.66564%0.637SS**THydrogen-bonded Turntrans-84.482.9-165.9-73.6160.3000112.5Q13L10-Q13 HydrophobicContact CD2-CG 3.91Å
11N31.2Very low30Very low168 Ų168128.3 Ų128.390%0.89865%0.645SS**THydrogen-bonded Turntrans-116.2-10.7148.7-83.1-12.4000112.3N9N9-N11 PolarHBondContact O-N 3.07Å; N9-N11 VanDerWaalsContact O-N 3.13Å
12E28.2Very low30.3Very low133 Ų133122.5 Ų122.562%0.62162%0.618SS**SBendtrans-133.6120.9171.8-65.6-174.2151.900108.6I14E12-I14 PolarHBondContact O-N 3.45Å
13Q34.3Very low30.8Very low88 Ų88122.2 Ų122.241%0.41162%0.615SS.*  trans-81116.7174.8-83.1-178.7-37.900109.8L10 Y64L10-Q13 HydrophobicContact CD2-CG 3.91Å; Q13-Y64 PolarHBondContact OE1-OH 2.91Å
14I34Very low31.1Very low68 Ų68121.9 Ų121.935%0.34961%0.607SS.*BIsolated β-bridgetrans-95.2126179.5-58176.3000108.4E12 I16 Y79 I80E12-I14 PolarHBondContact O-N 3.45Å; I14-I16 HydrophobicContact CG2-CG1 4.12Å; I14-Y79 HydrophobicContact CD1-CD1 4.18Å; I14-Y79 HydrophobicContact CG2-CD1 4.29Å; I14-I80 WeakPolarHBondContact CG2-O 3.43Å
15I39.7Very low31.3Very low19 Ų19119.7 Ų119.710%0.09759%0.59CS.*  trans-112.5108176.6-57.5-179.2000108.3I17 I59 Y64 I80 I82I15-I17 HydrophobicContact CG2-CD1 3.88Å; I15-I17 HydrophobicContact CG2-CG1 3.7Å; I15-I59 HydrophobicContact CD1-CD1 4.39Å; I15-I59 HydrophobicContact CG2-CD1 4.4Å; I15-Y64 HydrophobicContact CD1-CD1 3.71Å; I15-Y64 HydrophobicContact CD1-CD2 4.12Å; I15-Y64 HydrophobicContact CD1-CE1 3.66Å; I15-Y64 HydrophobicContact CD1-CE2 4.06Å; I15-Y64 HydrophobicContact CD1-CG 3.95Å; I15-Y64 HydrophobicContact CG1-CE1 4.5Å; I15-I80 CarbonylContact C-O 3.37Å; I15-I80 PolarHBondContact N-O 3.32Å; I15-I80 VanDerWaalsContact N-O 3.15Å; I15-I80 CarbonylContact O-C 3.49Å; I15-I80 WeakPolarHBondContact O-CB 3.04Å; I15-I80 WeakPolarHBondContact O-CG2 3.49Å; I15-I82 HydrophobicContact CB-CD1 4Å; I15-I82 HydrophobicContact CB-CG1 4.2Å; I15-I82 HydrophobicContact CD1-CB 4.32Å; I15-I82 HydrophobicContact CD1-CD1 4.29Å; I15-I82 HydrophobicContact CG2-CD1 4.18Å
16I36.8Very low31.4Very low85 Ų85120 Ų12044%0.43659%0.592SS.*  trans-87.3114.3179.6-58.9178.2000109.1I14 F35I14-I16 HydrophobicContact CG2-CG1 4.12Å; I16-F35 HydrophobicContact CG2-CE1 4.09Å; I16-F35 HydrophobicContact CG2-CE2 4.31Å; I16-F35 HydrophobicContact CG2-CZ 3.38Å
17I37.4Very low31.6Very low57 Ų57122.7 Ų122.729%0.29260%0.601SS.*  trans-122.9119.5-179.9-50.2-177.9000110.3I15 I53 I80 I82I15-I17 HydrophobicContact CG2-CD1 3.88Å; I15-I17 HydrophobicContact CG2-CG1 3.7Å; I17-I53 HydrophobicContact CG2-CD1 4.24Å; I17-I80 HydrophobicContact CB-CD1 4.36Å; I17-I80 WeakPolarHBondContact O-CD1 3.27Å; I17-I82 HydrophobicContact CD1-CD1 3.83Å
18G30Very low32Very low32 Ų32118.2 Ų118.233%0.3358%0.58SS.*  trans-91.2152.717500000113.1
19Y36.5Very low32Very low111 Ų111117.9 Ų117.944%0.43559%0.585SS.*  trans-101.9130.3-161.8-174.6-95.2000116.7L22 L25Y19-L22 VanDerWaalsContact CZ-N 3.33Å; Y19-L22 WeakPolarHBondContact OH-CB 3.49Å; Y19-L22 WeakPolarHBondContact OH-CD1 3.35Å; Y19-L22 WeakPolarHBondContact OH-CG 3.39Å; Y19-L22 PolarHBondContact OH-N 2.73Å; Y19-L25 HydrophobicContact CD2-CD1 3.56Å; Y19-L25 HydrophobicContact CE2-CD1 3.49Å; Y19-L25 VanDerWaalsContact CE2-CD1 3.49Å
20Q28.4Very low32.4Very low152 Ų152118.5 Ų118.571%0.7158%0.583SS**SBendtrans-170.3111.1130.7-111.1-177.7-6.700104.7
21R32.5Very low32.7Very low213 Ų213116.7 Ų116.780%0.80457%0.573SS**  cis-149.8139.928.9-102168159.5158.7-5.7108.4
22L33.2Very low32.6Very low112 Ų112113.5 Ų113.559%0.58656%0.562SS**  35.798.3127.6-104.4139.9000116.9Y19Y19-L22 VanDerWaalsContact CZ-N 3.33Å; Y19-L22 WeakPolarHBondContact OH-CB 3.49Å; Y19-L22 WeakPolarHBondContact OH-CD1 3.35Å; Y19-L22 WeakPolarHBondContact OH-CG 3.39Å; Y19-L22 PolarHBondContact OH-N 2.73Å
23I31.9Very low32.7Very low155 Ų155114.4 Ų114.480%0.79557%0.569SS**SBend-170.7116.3128.8-82.5139.4000103.9
24I32.3Very low32.4Very low115 Ų115116 Ų11659%0.5959%0.585SS**SBendtrans87.638.3-169.9-37.5156.4000115.3
25L31.1Very low32.3Very low85 Ų85116.3 Ų116.345%0.44558%0.584SS.*  trans-13432.7170.2-75.6162000111.7Y19 T27 L28Y19-L25 HydrophobicContact CD2-CD1 3.56Å; Y19-L25 HydrophobicContact CE2-CD1 3.49Å; Y19-L25 VanDerWaalsContact CE2-CD1 3.49Å; L25-T27 PolarHBondContact O-N 2.94Å; L25-L28 HydrophobicContact CD2-CD1 3.28Å; L25-L28 HydrophobicContact CD2-CG 4.16Å
26K27.9Very low31.7Very low196 Ų196123.3 Ų123.385%0.85262%0.621SS**THydrogen-bonded Turntrans-72.5-3.4-178.8-107.5-173.3176.2-174.90114.3
27T32.8Very low31.4Very low134 Ų134120.6 Ų120.682%0.82262%0.615SS**THydrogen-bonded Turntrans-115.63.5-172.623.20000115.1L25 E29L25-T27 PolarHBondContact O-N 2.94Å; T27-E29 PolarHBondContact O-N 3.39Å
28L33.7Very low31Very low80 Ų80124.4 Ų124.442%0.41963%0.634SS.*  trans-97.550.8179.3-68.1178.7000112.2L25 Q30 V71L25-L28 HydrophobicContact CD2-CD1 3.28Å; L25-L28 HydrophobicContact CD2-CG 4.16Å; L28-Q30 PolarHBondContact O-N 2.85Å; L28-V71 HydrophobicContact CD1-CG2 4.11Å; L28-V71 HydrophobicContact CD2-CB 4.31Å; L28-V71 HydrophobicContact CD2-CG2 3.87Å
29E29.8Very low31.1Very low181 Ų181127.1 Ų127.185%0.84664%0.64SS**THydrogen-bonded Turntrans-687.2-172.2-78.9-172.8151.700116T27T27-E29 PolarHBondContact O-N 3.39Å
30Q31.9Very low30.8Very low178 Ų178127.7 Ų127.783%0.83265%0.647SS**THydrogen-bonded Turntrans-146.842.5-170.2-61.9-174.5-10.700116.4L28L28-Q30 PolarHBondContact O-N 2.85Å
31L34.1Very low30.9Very low89 Ų89127.8 Ų127.847%0.46665%0.648SS.*  trans-113.6111.6171.6-80.2168.7000113.1V71L31-V71 HydrophobicContact CD1-CG1 4.08Å
32P28.5Very low30.9Very low101 Ų101122.1 Ų122.166%0.65663%0.633SS**  trans-90.4133.616933.3-26.8000112.3
33I30.9Very low31.1Very low152 Ų152123 Ų12378%0.77964%0.638SS**SBendtrans66.7110.7144.6-48.3172.8000119.1
34T27.7Very low31.1Very low122 Ų122123.5 Ų123.575%0.74864%0.637SS**  trans74.3102.1158.2470000119.9
35F32.2Very low31.4Very low74 Ų74122.2 Ų122.233%0.32563%0.631SS.*  trans-121.5112.5165.7-173.7-97.1000109.7I16 G37 V78I16-F35 HydrophobicContact CG2-CE1 4.09Å; I16-F35 HydrophobicContact CG2-CE2 4.31Å; I16-F35 HydrophobicContact CG2-CZ 3.38Å; F35-G37 PolarHBondContact O-N 3.26Å; F35-V78 HydrophobicContact CD2-CB 3.89Å; F35-V78 HydrophobicContact CD2-CG2 4.24Å; F35-V78 HydrophobicContact CE2-CB 4.07Å
36N25.4Very low32Very low165 Ų165127 Ų12788%0.88266%0.657SS**  trans-87.580175-78.1-23000110
37G30.5Very low32.7Very low29 Ų29123.3 Ų123.330%0.29964%0.638SS.*  trans-92.5146.4159.300000109.4F35 I39F35-G37 PolarHBondContact O-N 3.26Å; G37-I39 VanDerWaalsContact C-N 3.27Å; G37-I39 PolarHBondContact O-N 3.4Å
38I30.2Very low33.4Very low137 Ų137121.3 Ų121.370%0.70362%0.623SS**  trans-6592.1171.4-61.1170.4000107.3
39I31.9Very low34Very low88 Ų88122.4 Ų122.445%0.45163%0.628SS.*  trans-98.498.9170.8-58.9174.8000105.3G37 Q41G37-I39 VanDerWaalsContact C-N 3.27Å; G37-I39 PolarHBondContact O-N 3.4Å; I39-Q41 PolarHBondContact O-N 3.13Å
40E29.6Very low35.1Very low124 Ų124117.1 Ų117.158%0.57961%0.606SS**  trans-69.6108.7160.9-75169.3150.500106.2N42 Y52 K56E40-N42 PolarHBondContact O-N 3.48Å; E40-Y52 PolarHBondContact OE2-OH 2.81Å; E40-K56 IonicContact OE2-NZ 2.88Å; E40-K56 PolarHBondContact OE2-NZ 3.29Å
41Q30.2Very low36.1Very low154 Ų154111.3 Ų111.372%0.7258%0.582SS**  trans-53114160.2-98.2-178.6-42.700106.9I39I39-Q41 PolarHBondContact O-N 3.13Å
42N33.5Very low36.8Very low94 Ų94110.2 Ų110.250%0.50357%0.572SS.*  trans-11596.9166.9-159.5-31.4000107.2E40 H44 L45E40-N42 PolarHBondContact O-N 3.48Å; N42-H44 PolarHBondContact O-N 2.79Å; N42-H44 VanDerWaalsContact O-N 3.08Å; N42-H44 PolarHBondContact OD1-N 3.15Å; N42-L45 HydrophobicContact CB-CD1 3.9Å; N42-L45 HydrophobicContact CB-CG 4.31Å; N42-L45 VanDerWaalsContact CG-CD1 3.48Å; N42-L45 WeakPolarHBondContact ND2-CD1 3.21Å
43D36.3Very low37.9Very low130 Ų130106.2 Ų106.270%0.69555%0.545SS*.THydrogen-bonded Turntrans-69.11.2179.6-65.8-32.3000112.4
44H33.1Very low39.2Very low166 Ų166101.1 Ų101.177%0.76952%0.518SS*.THydrogen-bonded Turntrans-133.139.2-165.7-72.9-7.7000115.7N42N42-H44 PolarHBondContact O-N 2.79Å; N42-H44 VanDerWaalsContact O-N 3.08Å; N42-H44 PolarHBondContact OD1-N 3.15Å
45L39.1Very low40.5Very low88 Ų88102.2 Ų102.246%0.46151%0.514SS..  trans-126.1105.5179.7-72.1177.2000114.2N42 Y47N42-L45 HydrophobicContact CB-CD1 3.9Å; N42-L45 HydrophobicContact CB-CG 4.31Å; N42-L45 VanDerWaalsContact CG-CD1 3.48Å; N42-L45 WeakPolarHBondContact ND2-CD1 3.21Å; L45-Y47 HydrophobicContact CD2-CG 4.28Å; L45-Y47 PolarHBondContact O-N 2.82Å
46N43.1Very low41.6Very low186 Ų186102.6 Ų102.6100%0.99552%0.516SS*.  trans-60.117.4145-77.6-26.2000112.7
47Y42.2Very low42.9Very low117 Ų117100.8 Ų100.846%0.45950%0.498SS..SBendtrans-101.6118.7-170.4-150-95.3000108.1L45 L49 T51L45-Y47 HydrophobicContact CD2-CG 4.28Å; L45-Y47 PolarHBondContact O-N 2.82Å; Y47-L49 PolarHBondContact O-N 2.8Å; Y47-T51 HydrophobicContact CE1-CG2 3.75Å
48N47.7Very low44.2Very low92 Ų92108.7 Ų108.749%0.49252%0.524SS..  trans-55.9124.6-178.4-176.4-19.4000109.9I50 T51 Y52N48-I50 PolarHBondContact O-N 3.21Å; N48-I50 VanDerWaalsContact O-N 3.15Å; N48-I50 VanDerWaalsContact OD1-CB 3.31Å; N48-I50 WeakPolarHBondContact OD1-CB 3.37Å; N48-I50 PolarHBondContact OD1-N 3.23Å; N48-T51 WeakPolarHBondContact O-CA 3.47Å; N48-T51 WeakPolarHBondContact O-CB 3.26Å; N48-T51 PolarHBondContact O-N 3.36Å; N48-Y52 PolarHBondContact O-N 3.41Å
49L47Very low45.3Very low103 Ų103104.2 Ų104.254%0.53950%0.501SS..Hα-helixtrans-53.4-34.7179.7-174.870.5000112.1Y47 Y52 I53Y47-L49 PolarHBondContact O-N 2.8Å; L49-Y52 PolarHBondContact O-N 3.42Å; L49-I53 HydrophobicContact CG-CD1 4.1Å; L49-I53 WeakPolarHBondContact O-CB 2.98Å; L49-I53 VanDerWaalsContact O-CG1 3.3Å; L49-I53 WeakPolarHBondContact O-CG1 3.17Å; L49-I53 PolarHBondContact O-N 2.88Å
50I51.8Low46.7Very low71 Ų71103.7 Ų103.736%0.36450%0.499SS..Hα-helixtrans-59.8-53.6174.6-63.4175.8000109.3N48 Y52 I53 E54 L61N48-I50 PolarHBondContact O-N 3.21Å; N48-I50 VanDerWaalsContact O-N 3.15Å; N48-I50 VanDerWaalsContact OD1-CB 3.31Å; N48-I50 WeakPolarHBondContact OD1-CB 3.37Å; N48-I50 PolarHBondContact OD1-N 3.23Å; I50-Y52 VanDerWaalsContact C-N 3.32Å; I50-Y52 PolarHBondContact O-N 3Å; I50-I53 PolarHBondContact O-N 3.33Å; I50-E54 HydrophobicContact CG2-CG 4.33Å; I50-E54 WeakPolarHBondContact O-CB 3.19Å; I50-E54 VanDerWaalsContact O-CG 3.27Å; I50-E54 WeakPolarHBondContact O-CG 3.47Å; I50-E54 PolarHBondContact O-N 2.87Å; I50-L61 HydrophobicContact CB-CD1 4.23Å; I50-L61 HydrophobicContact CG1-CD1 4.45Å; I50-L61 HydrophobicContact CG2-CB 4.22Å; I50-L61 HydrophobicContact CG2-CD1 3.8Å
51T52.9Low48.1Very low55 Ų5598.1 Ų98.134%0.33747%0.473SS..Hα-helixtrans-61.7-38.5-179.8-49.80000112.2Y47 N48 E54 H55Y47-T51 HydrophobicContact CE1-CG2 3.75Å; N48-T51 WeakPolarHBondContact O-CA 3.47Å; N48-T51 WeakPolarHBondContact O-CB 3.26Å; N48-T51 PolarHBondContact O-N 3.36Å; T51-E54 PolarHBondContact O-N 3.16Å; T51-H55 VanDerWaalsContact O-CB 3.22Å; T51-H55 WeakPolarHBondContact O-CB 3.35Å; T51-H55 PolarHBondContact O-N 2.65Å
52Y49Very low49.7Very low66 Ų6696.4 Ų96.426%0.25947%0.469SS..Hα-helixtrans-62-48174.8173.6-96.7000111.9E40 N48 L49 I50 H55 K56E40-Y52 PolarHBondContact OE2-OH 2.81Å; N48-Y52 PolarHBondContact O-N 3.41Å; L49-Y52 PolarHBondContact O-N 3.42Å; I50-Y52 VanDerWaalsContact C-N 3.32Å; I50-Y52 PolarHBondContact O-N 3Å; Y52-H55 PolarHBondContact O-N 2.86Å; Y52-K56 HydrophobicContact CE1-CD 3.78Å; Y52-K56 HydrophobicContact CE2-CD 4.03Å; Y52-K56 WeakPolarHBondContact O-CB 3.16Å; Y52-K56 PolarHBondContact O-N 3.05Å; Y52-K56 WeakPolarHBondContact OH-CD 3.44Å; Y52-K56 PolarHBondContact OH-NZ 3.27Å
53I52.8Low50.9Low17 Ų1794.9 Ų94.99%0.08746%0.459CS..Hα-helixtrans-63-45.7178.7-71.7172.1000110I17 L49 I50 H55 Y57 I59 L61I17-I53 HydrophobicContact CG2-CD1 4.24Å; L49-I53 HydrophobicContact CG-CD1 4.1Å; L49-I53 WeakPolarHBondContact O-CB 2.98Å; L49-I53 VanDerWaalsContact O-CG1 3.3Å; L49-I53 WeakPolarHBondContact O-CG1 3.17Å; L49-I53 PolarHBondContact O-N 2.88Å; I50-I53 PolarHBondContact O-N 3.33Å; I53-H55 VanDerWaalsContact C-N 3.35Å; I53-H55 PolarHBondContact O-N 3.38Å; I53-Y57 HydrophobicContact CB-CD2 4.43Å; I53-Y57 HydrophobicContact CG2-CD2 4.02Å; I53-Y57 WeakPolarHBondContact O-CB 3.47Å; I53-Y57 WeakPolarHBondContact O-CD2 3.17Å; I53-Y57 PolarHBondContact O-N 3.05Å; I53-I59 HydrophobicContact CG2-CD1 3.71Å; I53-I59 HydrophobicContact CG2-CG1 4.15Å; I53-L61 HydrophobicContact CB-CD1 4.07Å; I53-L61 HydrophobicContact CG2-CD1 3.81Å; I53-L61 HydrophobicContact CG2-CD2 4.24Å; I53-L61 HydrophobicContact CG2-CG 4.27Å
54E57Low51.8Low45 Ų4589.5 Ų89.521%0.2143%0.429CS..Hα-helixtrans-59.6-45.7178.4-71.7-174.8145.500111.9I50 T51 K58 I59 L61I50-E54 HydrophobicContact CG2-CG 4.33Å; I50-E54 WeakPolarHBondContact O-CB 3.19Å; I50-E54 VanDerWaalsContact O-CG 3.27Å; I50-E54 WeakPolarHBondContact O-CG 3.47Å; I50-E54 PolarHBondContact O-N 2.87Å; T51-E54 PolarHBondContact O-N 3.16Å; E54-K58 CarbonylContact O-C 3.49Å; E54-K58 WeakPolarHBondContact O-CA 3.08Å; E54-K58 PolarHBondContact O-N 2.91Å; E54-I59 CarbonylContact C-O 3.47Å; E54-I59 WeakPolarHBondContact CA-O 3.39Å; E54-I59 WeakPolarHBondContact CB-O 3.2Å; E54-I59 WeakPolarHBondContact CG-O 3.38Å; E54-I59 PolarHBondContact O-N 3.01Å; E54-L61 HydrophobicContact CG-CB 4.1Å; E54-L61 HydrophobicContact CG-CD1 4.13Å; E54-L61 HydrophobicContact CG-CG 3.85Å; E54-L61 PolarHBondContact OE1-N 3.14Å
55H56.4Low52.9Low145 Ų14587.1 Ų87.167%0.67142%0.415SS*.Hα-helixtrans-72.5-48.4-178.5-169.3-101.3000112.6T51 Y52 I53 Y57 K58T51-H55 VanDerWaalsContact O-CB 3.22Å; T51-H55 WeakPolarHBondContact O-CB 3.35Å; T51-H55 PolarHBondContact O-N 2.65Å; Y52-H55 PolarHBondContact O-N 2.86Å; I53-H55 VanDerWaalsContact C-N 3.35Å; I53-H55 PolarHBondContact O-N 3.38Å; H55-Y57 PolarHBondContact O-N 3.47Å; H55-K58 PolarHBondContact O-N 3.5Å
56K53.6Low53.6Low83 Ų8385.7 Ų85.736%0.36141%0.407SS..Hα-helixtrans-65.6-41.7-177-177.7163.5-179.7169.50111.7E40 Y52E40-K56 IonicContact OE2-NZ 2.88Å; E40-K56 PolarHBondContact OE2-NZ 3.29Å; Y52-K56 HydrophobicContact CE1-CD 3.78Å; Y52-K56 HydrophobicContact CE2-CD 4.03Å; Y52-K56 WeakPolarHBondContact O-CB 3.16Å; Y52-K56 PolarHBondContact O-N 3.05Å; Y52-K56 WeakPolarHBondContact OH-CD 3.44Å; Y52-K56 PolarHBondContact OH-NZ 3.27Å
57Y52.8Low54Low126 Ų12683.1 Ų83.149%0.49439%0.393SS..Hα-helixtrans-97.90.6-177.5-59.3-73.2000113.3I53 H55 I59I53-Y57 HydrophobicContact CB-CD2 4.43Å; I53-Y57 HydrophobicContact CG2-CD2 4.02Å; I53-Y57 WeakPolarHBondContact O-CB 3.47Å; I53-Y57 WeakPolarHBondContact O-CD2 3.17Å; I53-Y57 PolarHBondContact O-N 3.05Å; H55-Y57 PolarHBondContact O-N 3.47Å; Y57-I59 PolarHBondContact O-N 2.83Å
58K58.4Low54.4Low195 Ų19580.3 Ų80.385%0.84839%0.391SS*.THydrogen-bonded Turntrans50.641.6-175.9-59.7-174177.7-176.40112.2E54 H55E54-K58 CarbonylContact O-C 3.49Å; E54-K58 WeakPolarHBondContact O-CA 3.08Å; E54-K58 PolarHBondContact O-N 2.91Å; H55-K58 PolarHBondContact O-N 3.5Å
59I53.5Low54.7Low43 Ų4378.5 Ų78.522%0.22138%0.383CS..  trans-111.7155.1176.462.6178.4000110.1I15 I53 E54 Y57 L61I15-I59 HydrophobicContact CD1-CD1 4.39Å; I15-I59 HydrophobicContact CG2-CD1 4.4Å; I53-I59 HydrophobicContact CG2-CD1 3.71Å; I53-I59 HydrophobicContact CG2-CG1 4.15Å; E54-I59 CarbonylContact C-O 3.47Å; E54-I59 WeakPolarHBondContact CA-O 3.39Å; E54-I59 WeakPolarHBondContact CB-O 3.2Å; E54-I59 WeakPolarHBondContact CG-O 3.38Å; E54-I59 PolarHBondContact O-N 3.01Å; Y57-I59 PolarHBondContact O-N 2.83Å; I59-L61 HydrophobicContact CD1-CD2 3.87Å; I59-L61 HydrophobicContact CD1-CG 4.49Å; I59-L61 HydrophobicContact CG1-CD2 4.42Å
60N61.3Low54.9Low78 Ų7882 Ų8242%0.41739%0.39SS..  trans-110.7106172.3-179.6-25.2000108.4N62 M63 Y64N60-N62 PolarHBondContact O-N 3.12Å; N60-N62 VanDerWaalsContact OD1-CB 3.26Å; N60-N62 WeakPolarHBondContact OD1-CB 3.21Å; N60-N62 PolarHBondContact OD1-N 2.7Å; N60-M63 HydrophobicContact CB-CG 4.15Å; N60-M63 HydrophobicContact CB-SD 4.47Å; N60-M63 WeakPolarHBondContact O-CB 3.17Å; N60-M63 PolarHBondContact O-N 3.28Å; N60-M63 VanDerWaalsContact O-N 3.11Å; N60-Y64 WeakPolarHBondContact O-CD2 3.3Å; N60-Y64 WeakPolarHBondContact O-CE2 3.48Å
61L57.8Low54.9Low7 Ų781 Ų814%0.03739%0.387CS..G310 helixtrans-68.8-21.4-175.4-71.5176.3000112.2I50 I53 E54 I59 M63 Y64 L66I50-L61 HydrophobicContact CB-CD1 4.23Å; I50-L61 HydrophobicContact CG1-CD1 4.45Å; I50-L61 HydrophobicContact CG2-CB 4.22Å; I50-L61 HydrophobicContact CG2-CD1 3.8Å; I53-L61 HydrophobicContact CB-CD1 4.07Å; I53-L61 HydrophobicContact CG2-CD1 3.81Å; I53-L61 HydrophobicContact CG2-CD2 4.24Å; I53-L61 HydrophobicContact CG2-CG 4.27Å; E54-L61 HydrophobicContact CG-CB 4.1Å; E54-L61 HydrophobicContact CG-CD1 4.13Å; E54-L61 HydrophobicContact CG-CG 3.85Å; E54-L61 PolarHBondContact OE1-N 3.14Å; I59-L61 HydrophobicContact CD1-CD2 3.87Å; I59-L61 HydrophobicContact CD1-CG 4.49Å; I59-L61 HydrophobicContact CG1-CD2 4.42Å; L61-M63 PolarHBondContact O-N 2.98Å; L61-Y64 PolarHBondContact O-N 3.48Å; L61-L66 HydrophobicContact CD2-CD2 4.23Å
62N64.1Low54.8Low118 Ų11884.4 Ų84.463%0.63140%0.397SS*.G310 helixtrans-63.6-22.7172.3-75.9-34.3000112.8N60 Y64 K85N60-N62 PolarHBondContact O-N 3.12Å; N60-N62 VanDerWaalsContact OD1-CB 3.26Å; N60-N62 WeakPolarHBondContact OD1-CB 3.21Å; N60-N62 PolarHBondContact OD1-N 2.7Å; N62-Y64 PolarHBondContact O-N 2.85Å; N62-K85 VanDerWaalsContact O-CD 3.26Å; N62-K85 WeakPolarHBondContact O-CD 3.31Å; N62-K85 VanDerWaalsContact O-CE 3.3Å; N62-K85 WeakPolarHBondContact O-CE 3.41Å; N62-K85 PolarHBondContact O-NZ 3.32Å
63M58.5Low54.7Low61 Ų6186.5 Ų86.530%0.341%0.409SS..G310 helixtrans-76.95.9172.8-58.9-167.4113.800113.1N60 L61 R84 K85N60-M63 HydrophobicContact CB-CG 4.15Å; N60-M63 HydrophobicContact CB-SD 4.47Å; N60-M63 WeakPolarHBondContact O-CB 3.17Å; N60-M63 PolarHBondContact O-N 3.28Å; N60-M63 VanDerWaalsContact O-N 3.11Å; L61-M63 PolarHBondContact O-N 2.98Å; M63-R84 CarbonylContact O-C 3.56Å; M63-R84 WeakPolarHBondContact O-CA 3.22Å; M63-R84 WeakPolarHBondContact O-CG 3.26Å; M63-K85 PolarHBondContact O-N 3.22Å
64Y56.1Low54.6Low17 Ų1792.6 Ų92.67%0.06743%0.434CS..BIsolated β-bridgetrans-128.6143-176.8-59.3-91.5000112.1Q13 I15 N60 L61 N62 L66 R84 K85Q13-Y64 PolarHBondContact OE1-OH 2.91Å; I15-Y64 HydrophobicContact CD1-CD1 3.71Å; I15-Y64 HydrophobicContact CD1-CD2 4.12Å; I15-Y64 HydrophobicContact CD1-CE1 3.66Å; I15-Y64 HydrophobicContact CD1-CE2 4.06Å; I15-Y64 HydrophobicContact CD1-CG 3.95Å; I15-Y64 HydrophobicContact CG1-CE1 4.5Å; N60-Y64 WeakPolarHBondContact O-CD2 3.3Å; N60-Y64 WeakPolarHBondContact O-CE2 3.48Å; L61-Y64 PolarHBondContact O-N 3.48Å; N62-Y64 PolarHBondContact O-N 2.85Å; Y64-L66 PolarHBondContact O-N 3.44Å; Y64-L66 VanDerWaalsContact O-N 3.11Å; Y64-R84 HydrophobicContact CD1-CB 4.01Å; Y64-R84 HydrophobicContact CD1-CG 4.2Å; Y64-R84 HydrophobicContact CE1-CB 4Å; Y64-R84 HydrophobicContact CE1-CG 3.99Å; Y64-K85 WeakPolarHBondContact O-CE 3.49Å
65Y55.7Low54.8Low116 Ų11697.8 Ų97.846%0.45546%0.459SS..  trans-82.182.5172.7-69.3-69.6000109.6N67 S68 P83 K85Y65-N67 PolarHBondContact O-N 3.18Å; Y65-N67 VanDerWaalsContact O-N 3.16Å; Y65-S68 WeakPolarHBondContact O-CA 3.22Å; Y65-S68 PolarHBondContact O-N 3Å; Y65-P83 PolarHBondContact N-O 2.93Å; Y65-K85 HydrophobicContact CD1-CD 4.14Å; Y65-K85 HydrophobicContact CD1-CG 3.87Å; Y65-K85 HydrophobicContact CD2-CB 4.38Å; Y65-K85 HydrophobicContact CD2-CG 3.71Å; Y65-K85 HydrophobicContact CE1-CD 3.92Å; Y65-K85 HydrophobicContact CE1-CG 3.78Å; Y65-K85 HydrophobicContact CE2-CB 3.98Å; Y65-K85 HydrophobicContact CE2-CG 3.64Å; Y65-K85 HydrophobicContact CG-CG 3.82Å
66L54.1Low54.5Low58 Ų5898 Ų9830%0.30447%0.465SS..G310 helixtrans-55.8-32.9178.9-60173.3000112.4L61 Y64 S68 T69 I82L61-L66 HydrophobicContact CD2-CD2 4.23Å; Y64-L66 PolarHBondContact O-N 3.44Å; Y64-L66 VanDerWaalsContact O-N 3.11Å; L66-S68 PolarHBondContact O-N 3.41Å; L66-T69 WeakPolarHBondContact O-CB 3.18Å; L66-T69 PolarHBondContact O-N 3.11Å; L66-T69 PolarHBondContact O-OG1 3.36Å; L66-I82 HydrophobicContact CD2-CD1 4.01Å; L66-I82 HydrophobicContact CD2-CG2 4.14Å
67N52.3Low54Low132 Ų13297.5 Ų97.571%0.70647%0.466SS*.G310 helixtrans-73-10.7176.9-61.2-10000113.7Y65Y65-N67 PolarHBondContact O-N 3.18Å; Y65-N67 VanDerWaalsContact O-N 3.16Å
68S50.1Low53.7Low59 Ų5992.9 Ų92.941%0.41345%0.45SS..G310 helixtrans-108.818.9179.4-550000112.1Y65 L66 R70 P83Y65-S68 WeakPolarHBondContact O-CA 3.22Å; Y65-S68 PolarHBondContact O-N 3Å; L66-S68 PolarHBondContact O-N 3.41Å; S68-R70 PolarHBondContact O-N 3.15Å; S68-P83 VanDerWaalsContact O-CD 3.26Å; S68-P83 WeakPolarHBondContact O-CD 3.3Å
69T54.2Low53.2Low54 Ų5485.7 Ų85.733%0.33142%0.418SS..  trans-57.8131177.2-62.20000110.9L66 I80 I81 I82L66-T69 WeakPolarHBondContact O-CB 3.18Å; L66-T69 PolarHBondContact O-N 3.11Å; L66-T69 PolarHBondContact O-OG1 3.36Å; T69-I80 HydrophobicContact CG2-CG2 3.44Å; T69-I80 VanDerWaalsContact CG2-CG2 3.44Å; T69-I81 WeakPolarHBondContact CA-O 3.45Å; T69-I82 HydrophobicContact CG2-CG1 4.05Å
70R50.1Low53.2Low177 Ų17785 Ų8567%0.66841%0.414SS*.EExtended strand (participates in β ladder)trans-112.8135.7174.6-62.3179.8179-176-2.4109.2S68 I81S68-R70 PolarHBondContact O-N 3.15Å; R70-I81 HydrophobicContact CB-CB 4.35Å; R70-I81 PolarHBondContact N-O 2.97Å; R70-I81 PolarHBondContact O-N 3.06Å
71V52.5Low52.8Low50 Ų5082.4 Ų82.430%0.30340%0.4SS..EExtended strand (participates in β ladder)trans-108.1127.3176.3-1740000108.6L28 L31 V78 Y79 I80L28-V71 HydrophobicContact CD1-CG2 4.11Å; L28-V71 HydrophobicContact CD2-CB 4.31Å; L28-V71 HydrophobicContact CD2-CG2 3.87Å; L31-V71 HydrophobicContact CD1-CG1 4.08Å; V71-V78 HydrophobicContact CG1-CG1 3.52Å; V71-Y79 CarbonylContact C-O 3.58Å; V71-Y79 WeakPolarHBondContact CA-O 3.09Å; V71-I80 HydrophobicContact CG2-CG1 4.39Å
72K50.5Low52.6Low126 Ų12682.3 Ų82.355%0.54840%0.4SS..EExtended strand (participates in β ladder)trans-124136.6172.3-72.9-173.5179.5175.40109Y79 I81K72-Y79 PolarHBondContact N-O 3.08Å; K72-Y79 WeakPolarHBondContact O-CA 3.4Å; K72-Y79 WeakPolarHBondContact O-CB 3.26Å; K72-Y79 PolarHBondContact O-N 2.99Å; K72-I81 HydrophobicContact CD-CD1 3.85Å; K72-I81 HydrophobicContact CG-CD1 4.21Å
73Q47.6Very low51.9Low110 Ų11079 Ų7951%0.51439%0.385SS..EExtended strand (participates in β ladder)trans-111.7135.2172.9-176.3176.5-9.900109.8Q75 I77 V78Q73-Q75 PolarHBondContact NE2-O 3.22Å; Q73-I77 WeakPolarHBondContact CA-O 3.19Å; Q73-V78 HydrophobicContact CG-CG2 4.34Å
74K50.3Low51.7Low144 Ų14481 Ų8163%0.62639%0.389SS*.EExtended strand (participates in β ladder)trans-132.9116169.5-169.8177.7-179.7179.30108.2N76 I77 Y79K74-N76 PolarHBondContact O-N 2.97Å; K74-I77 PolarHBondContact N-O 3.44Å; K74-I77 PolarHBondContact O-N 3.22Å; K74-Y79 HydrophobicContact CB-CE2 3.96Å
75Q61.6Low51.6Low155 Ų15583.4 Ų83.472%0.72440%0.4SS*.THydrogen-bonded Turntrans53.7-121.4-171-57.1171.6-29.500110.3Q73Q73-Q75 PolarHBondContact NE2-O 3.22Å
76N50.2Low51.8Low149 Ų14983.8 Ų83.880%0.79741%0.409SS*.THydrogen-bonded Turntrans-97.412.4-176-50.1-16000111.7K74K74-N76 PolarHBondContact O-N 2.97Å
77I42.5Very low51.7Low73 Ų7383.8 Ų83.837%0.37441%0.412SS..EExtended strand (participates in β ladder)trans-115.5125.9-176.9-53.9179000109.6Q73 K74 Y79Q73-I77 WeakPolarHBondContact CA-O 3.19Å; K74-I77 PolarHBondContact N-O 3.44Å; K74-I77 PolarHBondContact O-N 3.22Å; I77-Y79 HydrophobicContact CB-CE2 4.04Å; I77-Y79 HydrophobicContact CG2-CD2 4.25Å; I77-Y79 HydrophobicContact CG2-CE1 4.35Å; I77-Y79 HydrophobicContact CG2-CE2 3.71Å
78V45.5Very low51.7Low28 Ų2882.3 Ų82.317%0.1741%0.412CS..EExtended strand (participates in β ladder)trans-99.4124.4172.1-178.30000109.2F35 V71 Q73 I80F35-V78 HydrophobicContact CD2-CB 3.89Å; F35-V78 HydrophobicContact CD2-CG2 4.24Å; F35-V78 HydrophobicContact CE2-CB 4.07Å; V71-V78 HydrophobicContact CG1-CG1 3.52Å; Q73-V78 HydrophobicContact CG-CG2 4.34Å; V78-I80 HydrophobicContact CG1-CG1 4.43Å
79Y47.9Very low51.7Low45 Ų4586.4 Ų86.418%0.17643%0.429CS..EExtended strand (participates in β ladder)trans-101.1125.3173.9-60.8-94.2000108.5I14 V71 K72 K74 I77I14-Y79 HydrophobicContact CD1-CD1 4.18Å; I14-Y79 HydrophobicContact CG2-CD1 4.29Å; V71-Y79 CarbonylContact C-O 3.58Å; V71-Y79 WeakPolarHBondContact CA-O 3.09Å; K72-Y79 PolarHBondContact N-O 3.08Å; K72-Y79 WeakPolarHBondContact O-CA 3.4Å; K72-Y79 WeakPolarHBondContact O-CB 3.26Å; K72-Y79 PolarHBondContact O-N 2.99Å; K74-Y79 HydrophobicContact CB-CE2 3.96Å; I77-Y79 HydrophobicContact CB-CE2 4.04Å; I77-Y79 HydrophobicContact CG2-CD2 4.25Å; I77-Y79 HydrophobicContact CG2-CE1 4.35Å; I77-Y79 HydrophobicContact CG2-CE2 3.71Å
80I55Low51.4Low27 Ų2788.5 Ų88.514%0.13844%0.438CS..EExtended strand (participates in β ladder)trans-105.7119.6169.9-65.1167.7000106I14 I15 I17 T69 V71 V78 I82I14-I80 WeakPolarHBondContact CG2-O 3.43Å; I15-I80 CarbonylContact C-O 3.37Å; I15-I80 PolarHBondContact N-O 3.32Å; I15-I80 VanDerWaalsContact N-O 3.15Å; I15-I80 CarbonylContact O-C 3.49Å; I15-I80 WeakPolarHBondContact O-CB 3.04Å; I15-I80 WeakPolarHBondContact O-CG2 3.49Å; I17-I80 HydrophobicContact CB-CD1 4.36Å; I17-I80 WeakPolarHBondContact O-CD1 3.27Å; T69-I80 HydrophobicContact CG2-CG2 3.44Å; T69-I80 VanDerWaalsContact CG2-CG2 3.44Å; V71-I80 HydrophobicContact CG2-CG1 4.39Å; V78-I80 HydrophobicContact CG1-CG1 4.43Å; I80-I82 HydrophobicContact CG2-CD1 4.3Å; I80-I82 HydrophobicContact CG2-CG1 4.01Å
81I52.9Low51.1Low25 Ų2589.5 Ų89.513%0.12846%0.455CS..EExtended strand (participates in β ladder)trans-113.5113.4-175.6-56.9168.8000106.1T69 R70 K72T69-I81 WeakPolarHBondContact CA-O 3.45Å; R70-I81 HydrophobicContact CB-CB 4.35Å; R70-I81 PolarHBondContact N-O 2.97Å; R70-I81 PolarHBondContact O-N 3.06Å; K72-I81 HydrophobicContact CD-CD1 3.85Å; K72-I81 HydrophobicContact CG-CD1 4.21Å
82I54.1Low51Low4 Ų491.5 Ų91.52%0.02146%0.462CS..  trans-112.1112.7179.3-47.1-176.3000106.9I15 I17 L66 T69 I80 R84I15-I82 HydrophobicContact CB-CD1 4Å; I15-I82 HydrophobicContact CB-CG1 4.2Å; I15-I82 HydrophobicContact CD1-CB 4.32Å; I15-I82 HydrophobicContact CD1-CD1 4.29Å; I15-I82 HydrophobicContact CG2-CD1 4.18Å; I17-I82 HydrophobicContact CD1-CD1 3.83Å; L66-I82 HydrophobicContact CD2-CD1 4.01Å; L66-I82 HydrophobicContact CD2-CG2 4.14Å; T69-I82 HydrophobicContact CG2-CG1 4.05Å; I80-I82 HydrophobicContact CG2-CD1 4.3Å; I80-I82 HydrophobicContact CG2-CG1 4.01Å; I82-R84 PolarHBondContact O-N 3.11Å
83P48.3Very low51Low50 Ų5089.6 Ų89.633%0.32546%0.458SS..  trans-66.3135-178.623-27.3000110Y65 S68Y65-P83 PolarHBondContact N-O 2.93Å; S68-P83 VanDerWaalsContact O-CD 3.26Å; S68-P83 WeakPolarHBondContact O-CD 3.3Å
84R53.5Low51.2Low101 Ų10188.5 Ų88.538%0.38146%0.455SS..BIsolated β-bridgetrans-71.1138.3175.5-164.4175.4172.9170.8-7.4109.3M63 Y64 I82 L86M63-R84 CarbonylContact O-C 3.56Å; M63-R84 WeakPolarHBondContact O-CA 3.22Å; M63-R84 WeakPolarHBondContact O-CG 3.26Å; Y64-R84 HydrophobicContact CD1-CB 4.01Å; Y64-R84 HydrophobicContact CD1-CG 4.2Å; Y64-R84 HydrophobicContact CE1-CB 4Å; Y64-R84 HydrophobicContact CE1-CG 3.99Å; I82-R84 PolarHBondContact O-N 3.11Å; R84-L86 PolarHBondContact O-N 2.78Å; R84-L86 VanDerWaalsContact O-N 3.14Å
85K55.7Low51.3Low68 Ų6885.2 Ų85.230%0.29645%0.445SS..  trans-66.6106.3163.4-55.4-169.7-171.6152.10106.8N62 M63 Y64 Y65 T87N62-K85 VanDerWaalsContact O-CD 3.26Å; N62-K85 WeakPolarHBondContact O-CD 3.31Å; N62-K85 VanDerWaalsContact O-CE 3.3Å; N62-K85 WeakPolarHBondContact O-CE 3.41Å; N62-K85 PolarHBondContact O-NZ 3.32Å; M63-K85 PolarHBondContact O-N 3.22Å; Y64-K85 WeakPolarHBondContact O-CE 3.49Å; Y65-K85 HydrophobicContact CD1-CD 4.14Å; Y65-K85 HydrophobicContact CD1-CG 3.87Å; Y65-K85 HydrophobicContact CD2-CB 4.38Å; Y65-K85 HydrophobicContact CD2-CG 3.71Å; Y65-K85 HydrophobicContact CE1-CD 3.92Å; Y65-K85 HydrophobicContact CE1-CG 3.78Å; Y65-K85 HydrophobicContact CE2-CB 3.98Å; Y65-K85 HydrophobicContact CE2-CG 3.64Å; Y65-K85 HydrophobicContact CG-CG 3.82Å; K85-T87 PolarHBondContact O-N 3Å; K85-T87 VanDerWaalsContact O-N 3.12Å
86L58.5Low50.6Low125 Ų12580.9 Ų80.965%0.65443%0.427SS*.  trans-67.7108.3169.9-69.7165.7000106.9R84R84-L86 PolarHBondContact O-N 2.78Å; R84-L86 VanDerWaalsContact O-N 3.14Å
87T51.9Low50.6Low57 Ų5776.3 Ų76.335%0.3540%0.402SS..  trans-74.6142.3165490000108K85 D89 N90K85-T87 PolarHBondContact O-N 3Å; K85-T87 VanDerWaalsContact O-N 3.12Å; T87-D89 PolarHBondContact O-N 2.84Å; T87-N90 PolarHBondContact O-N 3Å; T87-N90 PolarHBondContact OG1-ND2 2.95Å
88S53.1Low51.2Low102 Ų10276.6 Ų76.671%0.71340%0.404SS*.G310 helixtrans-52.2-19.5-178.337.90000114.5N90S88-N90 PolarHBondContact O-N 2.89Å
89D50.8Low51.7Low145 Ų14580.3 Ų80.378%0.77542%0.422SS*.G310 helixtrans-73.9-4.8175.7-56.4-41.2000114.6T87T87-D89 PolarHBondContact O-N 2.84Å
90N46.5Very low52Low97 Ų9783.3 Ų83.352%0.51944%0.443SS..G310 helixtrans-111.917.7-178.3-66.5-60.7000113.9T87 S88T87-N90 PolarHBondContact O-N 3Å; T87-N90 PolarHBondContact OG1-ND2 2.95Å; S88-N90 PolarHBondContact O-N 2.89Å
91I43.5Very low51.7Low198 Ų19888.4 Ų88.4100%1.01547%0.471SS*.  trans-115.90175-56.5177.5000109.4

Retrieved 91 of 91 residues in 58.4 ms (Link to these results)