A0A5K4F5J3_SCHMA Loading...

Uncharacterized protein

AlphaFold DB , UniProt , Accession A0A5K4F5J3, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 62 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M44.4Very low46.3Very low244 Ų244129.2 Ų129.2100%1.20268%0.675SS**  0114.80-75.2-179.2-176.200106.6
2E43.2Very low46.8Very low160 Ų160123.5 Ų123.575%0.74866%0.661SS**  trans-79.7133.3169.3-90.6173.499.900109Q4E2-Q4 PolarHBondContact OE1-NE2 3.3Å; E2-Q4 HydrophobicContact CB-CG 4.46Å
3P43.4Very low47.6Very low126 Ų126119.1 Ų119.182%0.81864%0.641SS**  trans-89.5108.4171.333.2-25.5000108.4
4Q42.9Very low48.1Very low121 Ų121116.8 Ų116.857%0.56564%0.636SS**  trans-148.2117.3175.5-59.4-179.43.100106.8E2E2-Q4 PolarHBondContact OE1-NE2 3.3Å; E2-Q4 HydrophobicContact CB-CG 4.46Å
5H47.8Very low48.8Very low148 Ų148113.7 Ų113.769%0.68562%0.622SS**  cis-154.8136.948.2-74.774.3000110.3
6Q45.7Very low49.4Very low141 Ų141119.6 Ų119.666%0.65963%0.632SS**  trans-89.8106.3164.7-161.6172.73500107.2E8Q6-E8 PolarHBondContact O-N 2.97Å
7V48.3Very low49.9Very low111 Ų111115 Ų11567%0.67362%0.615SS**  trans-83.695.8171.5-174.30000107.3G9V7-G9 PolarHBondContact O-N 3.43Å
8E47.4Very low50.1Low144 Ų144116.5 Ų116.567%0.67362%0.622SS**  trans-7195.1171.5-165.9176.6-179.200108.6Q6Q6-E8 PolarHBondContact O-N 2.97Å
9G48.4Very low50.4Low31 Ų31114.3 Ų114.332%0.3261%0.61SS.*EExtended strand (participates in β ladder)trans-88.2109.2173.500000110.1V7V7-G9 PolarHBondContact O-N 3.43Å
10V50.6Low51Low81 Ų81115.8 Ų115.849%0.49162%0.624SS.*EExtended strand (participates in β ladder)trans-93.8105.7171.4176.20000108.8V30V10-V30 HydrophobicContact CG1-CG1 3.56Å
11L47.7Very low51.6Low114 Ų114117.2 Ų117.260%0.59763%0.63SS**EExtended strand (participates in β ladder)trans-89.5105.7168.5-163.981000108.4V13 V31L11-V13 HydrophobicContact CD2-CG2 3.74Å; L11-V13 HydrophobicContact CG-CG2 3.95Å; L11-V31 HydrophobicContact CB-CB 4.47Å; L11-V31 PolarHBondContact N-O 2.97Å; L11-V31 PolarHBondContact O-N 3.45Å
12A52.1Low52.2Low61 Ų61108.3 Ų108.350%0.50460%0.601SS.*EExtended strand (participates in β ladder)trans-92.4106.6172.500000109.6V29A12-V29 WeakPolarHBondContact CA-O 3.35Å
13V56.6Low53Low66 Ų66104.2 Ų104.240%0.459%0.586SS.*EExtended strand (participates in β ladder)trans-105.1114.7176.7-176.20000108.6L11 V15 V29L11-V13 HydrophobicContact CD2-CG2 3.74Å; L11-V13 HydrophobicContact CG-CG2 3.95Å; V13-V15 PolarHBondContact O-N 2.87Å; V13-V29 VanDerWaalsContact O-N 3.09Å; V13-V29 PolarHBondContact O-N 2.88Å; V13-V29 PolarHBondContact N-O 3.38Å
14P54.6Low53.7Low87 Ų87102 Ų10257%0.56557%0.571SS**EExtended strand (participates in β ladder)trans-74.2112.4176.628.1-31.5000109.6V26P14-V26 HydrophobicContact CB-CG1 4.2Å
15V58.8Low54.5Low70 Ų70100.2 Ų100.242%0.42457%0.565SS.*EExtended strand (participates in β ladder)trans-98.4123.9175.2-177.50000108.4V13 A17 V27 V29V13-V15 PolarHBondContact O-N 2.87Å; V15-A17 PolarHBondContact O-N 2.96Å; V15-V27 PolarHBondContact N-O 3.23Å; V15-V27 PolarHBondContact O-N 3.09Å; V15-V29 HydrophobicContact CB-CG2 4.39Å; V15-V29 HydrophobicContact CG2-CG2 3.75Å
16R58.5Low55Low208 Ų20897.1 Ų97.179%0.78556%0.556SS**EExtended strand (participates in β ladder)trans-83.2108.8169.8-66.9-175.4-179.2-169.80.4108.3V24R16-V24 HydrophobicContact CB-CG1 4.12Å; R16-V24 HydrophobicContact CG-CG1 4.33Å
17A58.4Low55.6Low42 Ų4291.8 Ų91.835%0.34753%0.533SS..EExtended strand (participates in β ladder)trans-97.2122.9173.500000109.4V15 N19 D25 V27V15-A17 PolarHBondContact O-N 2.96Å; A17-N19 PolarHBondContact O-N 3.4Å; A17-D25 PolarHBondContact O-N 2.92Å; A17-D25 PolarHBondContact N-O 2.98Å; A17-V27 HydrophobicContact CB-CG2 4.41Å
18L52.5Low56Low142 Ų14289.8 Ų89.874%0.74352%0.519SS*.EExtended strand (participates in β ladder)trans-79113.4165.2-101.6122.5000108V24L18-V24 HydrophobicContact CG-CG2 4.41Å
19N57.2Low56.4Low74 Ų7483.7 Ų83.740%0.39649%0.491SS..  trans-75.9152167.6-165.2-7.6000109.2A17 L21 G22 V23A17-N19 PolarHBondContact O-N 3.4Å; N19-L21 PolarHBondContact O-N 3.47Å; N19-G22 PolarHBondContact O-N 2.96Å; N19-V23 PolarHBondContact N-O 3.07Å
20V61.1Low56.8Low145 Ų14583.2 Ų83.288%0.87948%0.482SS*.THydrogen-bonded Turntrans-57.3-13.5-179.4-80.30000114.2
21L64.3Low57.1Low146 Ų14680.9 Ų80.976%0.76447%0.468SS*.THydrogen-bonded Turntrans-91.77.8174-64173.6000114.3N19 V23N19-L21 PolarHBondContact O-N 3.47Å; L21-V23 VanDerWaalsContact C-N 3.29Å; L21-V23 PolarHBondContact O-N 2.87Å
22G56.6Low57.5Low56 Ų5678.1 Ų78.158%0.57745%0.452SS*.SBendtrans78.67.7179.800000114.9N19N19-G22 PolarHBondContact O-N 2.96Å
23V59.7Low57.6Low74 Ų7477.8 Ų77.845%0.44844%0.444SS..  trans-82.5123.6174.6-176.50000108.7N19 L21 D25N19-V23 PolarHBondContact N-O 3.07Å; L21-V23 VanDerWaalsContact C-N 3.29Å; L21-V23 PolarHBondContact O-N 2.87Å; V23-D25 PolarHBondContact O-N 3.36Å
24V58.5Low57.7Low80 Ų8077 Ų7749%0.48544%0.439SS..EExtended strand (participates in β ladder)trans-84.4101.9169.7-179.30000107.4R16 L18R16-V24 HydrophobicContact CB-CG1 4.12Å; R16-V24 HydrophobicContact CG-CG1 4.33Å; L18-V24 HydrophobicContact CG-CG2 4.41Å
25D60Low57.9Low83 Ų8375.3 Ų75.344%0.44443%0.427SS..EExtended strand (participates in β ladder)trans-89.2128.5169.6-82.2-37.9000109A17 V23A17-D25 PolarHBondContact O-N 2.92Å; A17-D25 PolarHBondContact N-O 2.98Å; V23-D25 PolarHBondContact O-N 3.36Å
26V58.3Low57.9Low84 Ų8477 Ų7751%0.50943%0.43SS..EExtended strand (participates in β ladder)trans-85.9113.6169.1-177.20000106.9P14P14-V26 HydrophobicContact CB-CG1 4.2Å
27V57.3Low58Low29 Ų2972.5 Ų72.518%0.17642%0.422CS..EExtended strand (participates in β ladder)trans-104.2120175.3-173.70000107.9V15 A17 V29 V55V15-V27 PolarHBondContact N-O 3.23Å; V15-V27 PolarHBondContact O-N 3.09Å; A17-V27 HydrophobicContact CB-CG2 4.41Å; V27-V29 PolarHBondContact O-N 2.85Å; V27-V55 HydrophobicContact CG1-CG1 3.74Å
28D58.2Low58.2Low68 Ų6872.5 Ų72.536%0.36442%0.418SS..EExtended strand (participates in β ladder)trans-80.4109170.6-65.2-39.9000108
29V55Low58.7Low17 Ų1770.7 Ų70.710%0.10341%0.412CS..EExtended strand (participates in β ladder)trans-87.5118.7172.7-177.20000107.6A12 V13 V15 V27 V31 E53A12-V29 WeakPolarHBondContact CA-O 3.35Å; V13-V29 VanDerWaalsContact O-N 3.09Å; V13-V29 PolarHBondContact O-N 2.88Å; V13-V29 PolarHBondContact N-O 3.38Å; V15-V29 HydrophobicContact CB-CG2 4.39Å; V15-V29 HydrophobicContact CG2-CG2 3.75Å; V27-V29 PolarHBondContact O-N 2.85Å; V29-V31 HydrophobicContact CG1-CG2 4.12Å; V29-E53 HydrophobicContact CG1-CG 4.04Å
30V57Low59.1Low21 Ų2170 Ų7013%0.12741%0.411CS..EExtended strand (participates in β ladder)trans-99.1113.3176.1176.10000106.6V10 E32 M54V10-V30 HydrophobicContact CG1-CG1 3.56Å; V30-E32 HydrophobicContact CG1-CG 4.15Å; V30-M54 PolarHBondContact N-O 3.47Å; V30-M54 PolarHBondContact O-N 3.44Å; V30-M54 VanDerWaalsContact O-N 3.15Å; V30-M54 VanDerWaalsContact O-O 3.13Å
31V56.1Low59.6Low32 Ų3271 Ų7119%0.19441%0.411CS..EExtended strand (participates in β ladder)trans-99.8113.1172.8-174.60000107.9L11 V29 T33 P51L11-V31 HydrophobicContact CB-CB 4.47Å; L11-V31 PolarHBondContact N-O 2.97Å; L11-V31 PolarHBondContact O-N 3.45Å; V29-V31 HydrophobicContact CG1-CG2 4.12Å; V31-T33 HydrophobicContact CG1-CG2 4.38Å; V31-P51 HydrophobicContact CG1-CB 3.27Å; V31-P51 HydrophobicContact CG1-CG 4.41Å
32E57.4Low60Low56 Ų5667.2 Ų67.226%0.26241%0.407SS..EExtended strand (participates in β ladder)trans-93.9116.2172.1-70.5171.2-163.100107.6V30 R52 K56V30-E32 HydrophobicContact CG1-CG 4.15Å; E32-R52 PolarHBondContact O-N 3.24Å; E32-K56 IonicContact OE1-NZ 3.92Å
33T54Low60.7Low54 Ų5471.4 Ų71.433%0.33141%0.412SS..EExtended strand (participates in β ladder)trans-103.2120170.550.90000109.2V31 P51V31-T33 HydrophobicContact CG1-CG2 4.38Å; T33-P51 HydrophobicContact CG2-CB 3.79Å; T33-P51 HydrophobicContact CG2-CG 4.48Å
34V58.5Low61Low50 Ų5073.4 Ų73.430%0.30343%0.426SS..PPolyproline II helixtrans-90.8118.6172.6-1760000108.1E36 E49V34-E36 HydrophobicContact CG1-CG 4.2Å; V34-E49 HydrophobicContact CB-CB 4.31Å; V34-E49 PolarHBondContact O-N 2.91Å
35V58.8Low61.2Low50 Ų5072.3 Ų72.330%0.30342%0.42SS..EExtended strand (participates in β ladder)trans-106.9116.5171.5-175.80000107.1T46V35-T46 HydrophobicContact CG1-CG2 3.32Å
36E57.6Low61.4Low105 Ų10572.3 Ų72.349%0.49142%0.423SS..EExtended strand (participates in β ladder)trans-105.5116.1173-75-169.2150.900109.2V34 V38 K47V34-E36 HydrophobicContact CG1-CG 4.2Å; E36-V38 HydrophobicContact CB-CG2 4.17Å; E36-V38 PolarHBondContact O-N 3.01Å; E36-K47 PolarHBondContact N-O 3.12Å; E36-K47 PolarHBondContact O-N 3.22Å
37D61.5Low61.7Low114 Ų11473.8 Ų73.861%0.6142%0.422SS*.EExtended strand (participates in β ladder)trans-81.9114.7166.7-73.1-34.9000109.3T46D37-T46 VanDerWaalsContact OD1-CB 3.25Å; D37-T46 PolarHBondContact OD1-OG1 3.47Å; D37-T46 WeakPolarHBondContact OD1-CG2 3.26Å; D37-T46 VanDerWaalsContact OD1-CG2 3.26Å; D37-T46 WeakPolarHBondContact OD1-CB 3.34Å; D37-T46 WeakPolarHBondContact OD1-CA 3.25Å
38V63.6Low62Low43 Ų4377.2 Ų77.226%0.26144%0.443SS..EExtended strand (participates in β ladder)trans-117.2125.7-178.1-172.70000109E36 V40 T45 K47E36-V38 HydrophobicContact CB-CG2 4.17Å; E36-V38 PolarHBondContact O-N 3.01Å; V38-V40 HydrophobicContact CB-CG2 4.47Å; V38-V40 HydrophobicContact CG1-CG2 3.88Å; V38-V40 PolarHBondContact O-N 3.05Å; V38-T45 PolarHBondContact O-N 3.24Å; V38-T45 WeakPolarHBondContact O-CB 3.41Å; V38-T45 VanDerWaalsContact O-CB 3.3Å; V38-T45 CarbonylContact O-C 3.48Å; V38-T45 PolarHBondContact N-O 3.24Å; V38-T45 CarbonylContact C-O 3.54Å; V38-T45 WeakPolarHBondContact O-CA 3.46Å; V38-K47 HydrophobicContact CG2-CD 4.07Å; V38-K47 HydrophobicContact CG2-CG 4.4Å
39V63Low62.1Low103 Ų10378.6 Ų78.662%0.62445%0.447SS*.EExtended strand (participates in β ladder)trans-83.9113.6171.6-177.80000108.5E43V39-E43 WeakPolarHBondContact CA-O 3.3Å
40V64.4Low62.3Low61 Ų6186.5 Ų86.537%0.3748%0.48SS..EExtended strand (participates in β ladder)trans-113.6122.1177.1-174.50000107.9V38 G42 E43V38-V40 HydrophobicContact CB-CG2 4.47Å; V38-V40 HydrophobicContact CG1-CG2 3.88Å; V38-V40 PolarHBondContact O-N 3.05Å; V40-G42 PolarHBondContact O-N 3.15Å; V40-E43 PolarHBondContact N-O 2.8Å; V40-E43 PolarHBondContact O-N 3.19Å; V40-E43 VanDerWaalsContact O-N 3.1Å
41N72.3Confident62.4Low165 Ų16589 Ų8988%0.88250%0.497SS*.THydrogen-bonded Turntrans56.627.6-179-60.8-21.8000115.5E43N41-E43 VanDerWaalsContact C-N 3.32Å
42G71.8Confident62.6Low66 Ų6696 Ų9668%0.6852%0.52SS*.THydrogen-bonded Turntrans85.9-1.7-17900000114.6V40V40-G42 PolarHBondContact O-N 3.15Å
43E71.1Confident62.4Low145 Ų145100.2 Ų100.268%0.67854%0.54SS*.EExtended strand (participates in β ladder)trans-99.7133.4171.1-69.1-163.1114.400111.1V39 V40 N41 T45V39-E43 WeakPolarHBondContact CA-O 3.3Å; V40-E43 PolarHBondContact N-O 2.8Å; V40-E43 PolarHBondContact O-N 3.19Å; V40-E43 VanDerWaalsContact O-N 3.1Å; N41-E43 VanDerWaalsContact C-N 3.32Å; E43-T45 PolarHBondContact O-N 3.2Å
44P66.3Low62.4Low116 Ų116100.7 Ų100.775%0.75354%0.539SS*.EExtended strand (participates in β ladder)trans-68.5120.1173.428.5-32.1000109.5
45T62.7Low62.2Low57 Ų57102.5 Ų102.535%0.3555%0.55SS.*EExtended strand (participates in β ladder)trans-122.1119.2178.6-53.70000109.8V38 E43V38-T45 PolarHBondContact O-N 3.24Å; V38-T45 WeakPolarHBondContact O-CB 3.41Å; V38-T45 VanDerWaalsContact O-CB 3.3Å; V38-T45 CarbonylContact O-C 3.48Å; V38-T45 PolarHBondContact N-O 3.24Å; V38-T45 CarbonylContact C-O 3.54Å; V38-T45 WeakPolarHBondContact O-CA 3.46Å; E43-T45 PolarHBondContact O-N 3.2Å
46T65.4Low62.2Low83 Ų83105.5 Ų105.551%0.50956%0.559SS.*EExtended strand (participates in β ladder)trans-82.3120.8173.2-54.10000110.1V35 D37V35-T46 HydrophobicContact CG1-CG2 3.32Å; D37-T46 VanDerWaalsContact OD1-CB 3.25Å; D37-T46 PolarHBondContact OD1-OG1 3.47Å; D37-T46 WeakPolarHBondContact OD1-CG2 3.26Å; D37-T46 VanDerWaalsContact OD1-CG2 3.26Å; D37-T46 WeakPolarHBondContact OD1-CB 3.34Å; D37-T46 WeakPolarHBondContact OD1-CA 3.25Å
47K63.9Low62Low115 Ų115105 Ų10550%0.557%0.567SS.*EExtended strand (participates in β ladder)trans-100.7113.1168.4-71.1-175.2-178.9176.40108.8E36 V38E36-K47 PolarHBondContact N-O 3.12Å; E36-K47 PolarHBondContact O-N 3.22Å; V38-K47 HydrophobicContact CG2-CD 4.07Å; V38-K47 HydrophobicContact CG2-CG 4.4Å
48T62.6Low61.8Low100 Ų100108.3 Ų108.361%0.61357%0.571SS**EExtended strand (participates in β ladder)trans-87.1111.6169.6-48.60000108.4
49E61.7Low61.1Low97 Ų97110.7 Ų110.745%0.45359%0.59SS.*PPolyproline II helixtrans-71.3142.2166.8-165.6175.9145.700108.4V34V34-E49 HydrophobicContact CB-CB 4.31Å; V34-E49 PolarHBondContact O-N 2.91Å
50K58.8Low60.8Low183 Ų183114.3 Ų114.380%0.79660%0.597SS**PPolyproline II helixtrans-57.2139.1179.2-78-177.9177.4178.60109.6R52K50-R52 PolarHBondContact O-N 2.64Å
51P59.3Low60Low74 Ų74122.4 Ų122.448%0.48162%0.621SS.*PPolyproline II helixtrans-51.9127.7176.116.8-28.2000110.4V31 T33 E53V31-P51 HydrophobicContact CG1-CB 3.27Å; V31-P51 HydrophobicContact CG1-CG 4.41Å; T33-P51 HydrophobicContact CG2-CB 3.79Å; T33-P51 HydrophobicContact CG2-CG 4.48Å; P51-E53 PolarHBondContact O-N 2.99Å
52R59.7Low58.9Low178 Ų178128 Ų12867%0.67264%0.637SS**EExtended strand (participates in β ladder)trans-84111.3166.5-79.9-178.3155.5-179.6-3.4107.2E32 K50 M54E32-R52 PolarHBondContact O-N 3.24Å; K50-R52 PolarHBondContact O-N 2.64Å; R52-M54 PolarHBondContact O-N 2.8Å
53E53.6Low58.3Low145 Ų145131.1 Ų131.168%0.67864%0.635SS**EExtended strand (participates in β ladder)trans-70.4111.2174.6-168.4177.9165.300109V29 P51 V55V29-E53 HydrophobicContact CG1-CG 4.04Å; P51-E53 PolarHBondContact O-N 2.99Å; E53-V55 HydrophobicContact CG-CG2 4.49Å
54M54.9Low57.6Low65 Ų65130.4 Ų130.432%0.3263%0.633SS.*EExtended strand (participates in β ladder)trans-109.8101.3175.5-82178.339.600109.8V30 R52 K56V30-M54 PolarHBondContact N-O 3.47Å; V30-M54 PolarHBondContact O-N 3.44Å; V30-M54 VanDerWaalsContact O-N 3.15Å; V30-M54 VanDerWaalsContact O-O 3.13Å; R52-M54 PolarHBondContact O-N 2.8Å; M54-K56 PolarHBondContact O-N 2.78Å; M54-K56 VanDerWaalsContact O-N 3.12Å
55V53.2Low57.1Low88 Ų88131.2 Ų131.253%0.53363%0.626SS.*EExtended strand (participates in β ladder)trans-78.795.3172.6-1760000108.8V27 E53 S57V27-V55 HydrophobicContact CG1-CG1 3.74Å; E53-V55 HydrophobicContact CG-CG2 4.49Å; V55-S57 PolarHBondContact O-N 3.29Å
56K58Low56.8Low113 Ų113135.5 Ų135.549%0.49164%0.643SS.*EExtended strand (participates in β ladder)trans-88.490.8168.7-70.3-179.1-174161.40108.5E32 M54 R58E32-K56 IonicContact OE1-NZ 3.92Å; M54-K56 PolarHBondContact O-N 2.78Å; M54-K56 VanDerWaalsContact O-N 3.12Å; K56-R58 PolarHBondContact O-N 2.82Å; K56-R58 VanDerWaalsContact O-N 3.07Å
57S54.4Low56.2Low94 Ų94138.8 Ų138.866%0.65765%0.651SS**  trans-63.2108.4168.1168.90000109.5V55 S59V55-S57 PolarHBondContact O-N 3.29Å; S57-S59 PolarHBondContact O-N 3.43Å
58R57.6Low55.7Low184 Ų184140.4 Ų140.469%0.69466%0.661SS**  trans-92.991.4170.5-166.8176.7-176.1179.44.2108.6K56 K60K56-R58 PolarHBondContact O-N 2.82Å; K56-R58 VanDerWaalsContact O-N 3.07Å; R58-K60 PolarHBondContact O-N 3.01Å
59S49.3Very low55.2Low93 Ų93143.3 Ų143.365%0.6566%0.664SS**  trans-62.1105.5171.3-164.40000109.3S57 R61S57-S59 PolarHBondContact O-N 3.43Å; S59-R61 VanDerWaalsContact C-N 3.26Å; S59-R61 PolarHBondContact O-N 3.1Å
60K56.9Low54.7Low179 Ų179146.8 Ų146.878%0.77868%0.681SS**  trans-72.984.8169.4-73.3-95.2-1731670107.6R58 K62R58-K60 PolarHBondContact O-N 3.01Å; K60-K62 PolarHBondContact O-N 3.18Å
61R46.4Very low54.4Low231 Ų231143.8 Ų143.887%0.87267%0.671SS**  trans-75.3106.2161.9-78.5-173.2-174.2165.61.8108.5S59S59-R61 VanDerWaalsContact C-N 3.26Å; S59-R61 PolarHBondContact O-N 3.1Å
62K49.5Very low54Low282 Ų282150.2 Ų150.2100%1.22669%0.688SS**  trans-174.30131-97.3-167-173.9-168.60109.5K60K60-K62 PolarHBondContact O-N 3.18Å

Retrieved 62 of 62 residues in 17.5 ms (Link to these results)