A0A5K4F6L1_SCHMA Loading...

Secreted protein

AlphaFold DB , UniProt , Accession A0A5K4F6L1, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 71 aa.

						>A0A5K4F6L1_SCHMA|A0A5K4F6L1
MNRLMSFTLLVCLILIGLPEKQAHLQSRHGLVSYDVPFTCWKCKCHLALLGDVSRFVFHMNIVIYQCNLTH
					

Structure Viewer

Loading PAE data...

(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	46.8	Very low	52.4	Low	235 Å²	235	118.3 Å²	118.3	100%	1.158	59%	0.586	S	S	*	*				0	115	0	-68.7	154.4	167.6	0	0	106.3
2	N	56.1	Low	52.6	Low	134 Å²	134	108.9 Å²	108.9	72%	0.717	54%	0.54	S	S	*	.			trans	177.6	-17.7	171.6	-95.6	2.2	0	0	0	113.3
3	R	50.1	Low	52.6	Low	228 Å²	228	107.2 Å²	107.2	86%	0.86	53%	0.533	S	S	*	.	H	α-helix	trans	-71.9	-31.7	177.2	-82.9	-177.4	161.7	-176.6	-5.4	114
4	L	53.6	Low	52.8	Low	144 Å²	144	107.8 Å²	107.8	75%	0.754	54%	0.538	S	S	*	.	H	α-helix	trans	-71.7	-36.5	-177.1	-124.9	81.3	0	0	0	113	F7 T8	L4-F7 PolarHBondContact O-N 3.03Å; L4-T8 PolarHBondContact O-N 3.46Å; L4-T8 VanDerWaalsContact O-N 3.17Å; L4-T8 PolarHBondContact O-OG1 3.12Å
5	M	52.1	Low	52.8	Low	102 Å²	102	108.2 Å²	108.2	50%	0.502	54%	0.542	S	S	.	.	H	α-helix	trans	-66.4	-39	-176.3	-76.2	166.3	162.2	0	0	112.4	T8 L9 L69	M5-T8 PolarHBondContact O-N 2.73Å; M5-L9 PolarHBondContact O-N 3.25Å; M5-L69 HydrophobicContact CB-CD1 4.39Å; M5-L69 HydrophobicContact CE-CD1 4.39Å; M5-L69 HydrophobicContact CG-CD1 3.95Å
6	S	52	Low	53	Low	71 Å²	71	104.6 Å²	104.6	50%	0.497	52%	0.524	S	S	.	.	H	α-helix	trans	-70	-40.6	178.7	-173.6	0	0	0	0	112.7	T8 L9 L10	S6-T8 VanDerWaalsContact C-N 3.33Å; S6-T8 PolarHBondContact O-N 3.38Å; S6-L9 PolarHBondContact O-N 2.83Å; S6-L10 PolarHBondContact O-N 3.3Å
7	F	53.2	Low	53	Low	148 Å²	148	101.9 Å²	101.9	65%	0.649	53%	0.529	S	S	*	.	H	α-helix	trans	-64.3	-37.1	176	-100.1	-87	0	0	0	112.9	L4 L9 L10 V11	L4-F7 PolarHBondContact O-N 3.03Å; F7-L9 VanDerWaalsContact C-N 3.35Å; F7-L10 PolarHBondContact O-N 3.37Å; F7-V11 WeakPolarHBondContact O-CG2 3.24Å; F7-V11 PolarHBondContact O-N 2.92Å
8	T	54.2	Low	52.7	Low	19 Å²	19	103.9 Å²	103.9	12%	0.117	54%	0.54	C	S	.	.	H	α-helix	trans	-62.6	-43.2	177	-60.3	0	0	0	0	111.1	L4 M5 S6 L10 V11 C12 C43	L4-T8 PolarHBondContact O-N 3.46Å; L4-T8 VanDerWaalsContact O-N 3.17Å; L4-T8 PolarHBondContact O-OG1 3.12Å; M5-T8 PolarHBondContact O-N 2.73Å; S6-T8 VanDerWaalsContact C-N 3.33Å; S6-T8 PolarHBondContact O-N 3.38Å; T8-L10 PolarHBondContact O-N 2.97Å; T8-V11 PolarHBondContact O-N 3.21Å; T8-C12 PolarHBondContact O-N 3.37Å; T8-C12 PolarHBondContact O-SG 3.23Å; T8-C43 HydrophobicContact CG2-CB 3.65Å
9	L	53.2	Low	52.8	Low	71 Å²	71	100.7 Å²	100.7	37%	0.372	53%	0.526	S	S	.	.	H	α-helix	trans	-59.4	-46.7	175.6	-71.1	165.1	0	0	0	111.6	M5 S6 F7 V11 C12 L13 C67	M5-L9 PolarHBondContact O-N 3.25Å; S6-L9 PolarHBondContact O-N 2.83Å; F7-L9 VanDerWaalsContact C-N 3.35Å; L9-V11 PolarHBondContact O-N 3.19Å; L9-C12 PolarHBondContact O-N 3.1Å; L9-L13 VanDerWaalsContact O-CG 3.26Å; L9-L13 WeakPolarHBondContact O-CG 3.45Å; L9-L13 PolarHBondContact O-N 3.27Å; L9-C67 HydrophobicContact CD2-CB 3.86Å
10	L	53	Low	52.6	Low	103 Å²	103	104.6 Å²	104.6	54%	0.539	54%	0.541	S	S	.	.	H	α-helix	trans	-63.7	-39.7	-179.4	-131.2	132.9	0	0	0	112.4	S6 F7 T8 L13 I14	S6-L10 PolarHBondContact O-N 3.3Å; F7-L10 PolarHBondContact O-N 3.37Å; T8-L10 PolarHBondContact O-N 2.97Å; L10-L13 PolarHBondContact O-N 3.14Å; L10-I14 HydrophobicContact CD2-CD1 4.13Å; L10-I14 WeakPolarHBondContact O-CD1 3.23Å; L10-I14 VanDerWaalsContact O-CG1 3.3Å; L10-I14 WeakPolarHBondContact O-CG1 3.22Å; L10-I14 PolarHBondContact O-N 3.1Å
11	V	52.5	Low	52.4	Low	46 Å²	46	108.1 Å²	108.1	28%	0.279	55%	0.552	S	S	.	*	H	α-helix	trans	-70.1	-40.8	176.7	173.1	0	0	0	0	111.9	F7 T8 L9 L13 I14 L15 K42	F7-V11 WeakPolarHBondContact O-CG2 3.24Å; F7-V11 PolarHBondContact O-N 2.92Å; T8-V11 PolarHBondContact O-N 3.21Å; L9-V11 PolarHBondContact O-N 3.19Å; V11-L13 VanDerWaalsContact C-N 3.27Å; V11-L13 PolarHBondContact O-N 2.94Å; V11-I14 PolarHBondContact O-N 2.75Å; V11-L15 HydrophobicContact CG1-CD1 4.22Å; V11-L15 PolarHBondContact O-N 3.36Å; V11-K42 HydrophobicContact CG1-CD 4.13Å
12	C	54.2	Low	52.6	Low	6 Å²	6	101.3 Å²	101.3	4%	0.041	52%	0.518	C	S	.	.	H	α-helix	trans	-64.5	-34.7	176.1	-54.9	0	0	0	0	110.7	T8 L9 I16 C40	T8-C12 PolarHBondContact O-N 3.37Å; T8-C12 PolarHBondContact O-SG 3.23Å; L9-C12 PolarHBondContact O-N 3.1Å; C12-I16 WeakPolarHBondContact O-CD1 3.49Å; C12-I16 VanDerWaalsContact O-CG1 3.23Å; C12-I16 WeakPolarHBondContact O-CG1 3.11Å; C12-C40 HydrophobicContact CB-CB 4.13Å; C12-C40 WeakPolarHBondContact CB-SG 3.26Å; C12-C40 WeakPolarHBondContact SG-CB 3.17Å; C12-C40 CovalentContact SG-SG 2.06Å; C12-C40 PolarHBondContact SG-SG 3.18Å
13	L	53.5	Low	52.2	Low	86 Å²	86	97.5 Å²	97.5	45%	0.45	51%	0.505	S	S	.	.	H	α-helix	trans	-66.9	-39.3	176.3	-72.9	166.3	0	0	0	113.3	L9 L10 V11 I16	L9-L13 VanDerWaalsContact O-CG 3.26Å; L9-L13 WeakPolarHBondContact O-CG 3.45Å; L9-L13 PolarHBondContact O-N 3.27Å; L10-L13 PolarHBondContact O-N 3.14Å; V11-L13 VanDerWaalsContact C-N 3.27Å; V11-L13 PolarHBondContact O-N 2.94Å; L13-I16 PolarHBondContact O-N 3.43Å
14	I	55.2	Low	52	Low	116 Å²	116	93.3 Å²	93.3	60%	0.595	50%	0.495	S	S	*	.	H	α-helix	trans	-68.9	-37.4	-179	-66.7	162.5	0	0	0	111.7	L10 V11 I16 G17	L10-I14 HydrophobicContact CD2-CD1 4.13Å; L10-I14 WeakPolarHBondContact O-CD1 3.23Å; L10-I14 VanDerWaalsContact O-CG1 3.3Å; L10-I14 WeakPolarHBondContact O-CG1 3.22Å; L10-I14 PolarHBondContact O-N 3.1Å; V11-I14 PolarHBondContact O-N 2.75Å; I14-I16 PolarHBondContact O-N 2.9Å; I14-G17 PolarHBondContact O-N 3.38Å
15	L	52.7	Low	51.6	Low	114 Å²	114	92.5 Å²	92.5	60%	0.597	49%	0.491	S	S	*	.	H	α-helix	trans	-68.7	-21.2	179.6	-76.2	163.1	0	0	0	113.3	V11	V11-L15 HydrophobicContact CG1-CD1 4.22Å; V11-L15 PolarHBondContact O-N 3.36Å
16	I	56.5	Low	51.5	Low	51 Å²	51	92.1 Å²	92.1	26%	0.262	49%	0.488	S	S	.	.	H	α-helix	trans	-85.8	-16.1	179.6	-63.3	166	0	0	0	111.3	C12 L13 I14 L18 L47 Y65	C12-I16 WeakPolarHBondContact O-CD1 3.49Å; C12-I16 VanDerWaalsContact O-CG1 3.23Å; C12-I16 WeakPolarHBondContact O-CG1 3.11Å; L13-I16 PolarHBondContact O-N 3.43Å; I14-I16 PolarHBondContact O-N 2.9Å; I16-L18 PolarHBondContact O-N 3.38Å; I16-L47 HydrophobicContact CD1-CD2 4.42Å; I16-Y65 HydrophobicContact CD1-CD2 3.59Å; I16-Y65 HydrophobicContact CD1-CE2 4.24Å; I16-Y65 HydrophobicContact CD1-CG 4.04Å; I16-Y65 HydrophobicContact CG1-CD2 4.46Å; I16-Y65 HydrophobicContact CG2-CD2 3.78Å; I16-Y65 HydrophobicContact CG2-CE2 3.56Å
17	G	51.8	Low	51.3	Low	58 Å²	58	93.9 Å²	93.9	60%	0.598	50%	0.5	S	S	*	.			trans	-70.3	13.3	175.9	0	0	0	0	0	116	I14 P19	I14-G17 PolarHBondContact O-N 3.38Å; G17-P19 WeakPolarHBondContact O-CD 3.15Å
18	L	48.6	Very low	51.1	Low	139 Å²	139	96.4 Å²	96.4	73%	0.728	51%	0.505	S	S	*	.			trans	-110.3	69.1	170.3	-100.3	115.1	0	0	0	112	I16 E20	I16-L18 PolarHBondContact O-N 3.38Å; L18-E20 VanDerWaalsContact C-N 3.28Å; L18-E20 PolarHBondContact O-N 3.26Å
19	P	53.6	Low	51	Low	43 Å²	43	102.2 Å²	102.2	28%	0.279	53%	0.531	S	S	.	.	T	Hydrogen-bonded Turn	trans	-83.3	12.3	176	34.5	-35.6	0	0	0	114.3	G17 K21 Q22 A23	G17-P19 WeakPolarHBondContact O-CD 3.15Å; P19-K21 PolarHBondContact O-N 3.18Å; P19-K21 VanDerWaalsContact O-N 3.14Å; P19-Q22 PolarHBondContact O-N 3.21Å; P19-A23 PolarHBondContact O-N 3.44Å
20	E	50	Low	50.6	Low	177 Å²	177	102.9 Å²	102.9	83%	0.827	56%	0.555	S	S	*	*	T	Hydrogen-bonded Turn	trans	-60.6	-25.8	178.1	-89.1	-164.8	90.8	0	0	112.9	L18	L18-E20 VanDerWaalsContact C-N 3.28Å; L18-E20 PolarHBondContact O-N 3.26Å
21	K	48.7	Very low	50.3	Low	180 Å²	180	105.1 Å²	105.1	78%	0.783	57%	0.566	S	S	*	*	T	Hydrogen-bonded Turn	trans	-95.2	-16.9	178.2	-71.4	-171.1	176.8	-177.2	0	115	P19	P19-K21 PolarHBondContact O-N 3.18Å; P19-K21 VanDerWaalsContact O-N 3.14Å
22	Q	49	Very low	50.1	Low	91 Å²	91	106.1 Å²	106.1	43%	0.425	57%	0.573	S	S	.	*	T	Hydrogen-bonded Turn	trans	-81.4	-31.4	176.3	-87.2	-177.5	-23.8	0	0	112.2	P19 H24 L25 Q26	P19-Q22 PolarHBondContact O-N 3.21Å; Q22-H24 PolarHBondContact O-N 3.4Å; Q22-L25 PolarHBondContact O-N 2.77Å; Q22-L25 VanDerWaalsContact O-N 3.12Å; Q22-Q26 PolarHBondContact O-N 3.24Å
23	A	49.2	Very low	49.8	Very low	55 Å²	55	110.1 Å²	110.1	46%	0.455	60%	0.601	S	S	.	*	H	α-helix	trans	-61.1	-28.4	173.6	0	0	0	0	0	112.9	P19	P19-A23 PolarHBondContact O-N 3.44Å
24	H	44.9	Very low	49.9	Very low	139 Å²	139	110 Å²	110	64%	0.644	60%	0.595	S	S	*	*	H	α-helix	trans	-75.1	-25	177.8	-159.6	53.8	0	0	0	113.4	Q22	Q22-H24 PolarHBondContact O-N 3.4Å
25	L	44.7	Very low	49.7	Very low	128 Å²	128	111.3 Å²	111.3	67%	0.67	60%	0.603	S	S	*	*	H	α-helix	trans	-85	-28.4	176.7	-75	160.1	0	0	0	112.3	Q22 S27	Q22-L25 PolarHBondContact O-N 2.77Å; Q22-L25 VanDerWaalsContact O-N 3.12Å; L25-S27 VanDerWaalsContact C-N 3.35Å; L25-S27 PolarHBondContact O-N 3.4Å
26	Q	50	Low	49.7	Very low	94 Å²	94	110 Å²	110	44%	0.439	60%	0.6	S	S	.	*	H	α-helix	trans	-63.8	-35	175.6	-83.3	-171.6	-23	0	0	113.8	Q22 R28 V32	Q22-Q26 PolarHBondContact O-N 3.24Å; Q26-R28 VanDerWaalsContact C-N 3.31Å; Q26-R28 PolarHBondContact O-N 3Å; Q26-V32 HydrophobicContact CG-CG2 3.56Å
27	S	48.7	Very low	49.6	Very low	107 Å²	107	111.6 Å²	111.6	75%	0.748	61%	0.613	S	S	*	*	T	Hydrogen-bonded Turn	trans	-78.8	-9.6	-173.5	-63.4	0	0	0	0	114.8	L25	L25-S27 VanDerWaalsContact C-N 3.35Å; L25-S27 PolarHBondContact O-N 3.4Å
28	R	49.9	Very low	50.1	Low	201 Å²	201	112 Å²	112	76%	0.758	60%	0.599	S	S	*	*	T	Hydrogen-bonded Turn	trans	-111.6	-21.8	-176.9	-77.6	-170	169.9	-167.5	-1.6	114.5	Q26	Q26-R28 VanDerWaalsContact C-N 3.31Å; Q26-R28 PolarHBondContact O-N 3Å
29	H	50.3	Low	50.7	Low	141 Å²	141	108.9 Å²	108.9	65%	0.653	59%	0.585	S	S	*	*			trans	-137.1	101.7	-178.3	-70.3	-108.8	0	0	0	107	L31	H29-L31 PolarHBondContact O-N 3.31Å
30	G	45	Very low	51	Low	86 Å²	86	107.1 Å²	107.1	89%	0.887	57%	0.574	S	S	*	*	S	Bend	trans	-65.3	33.1	-178.7	0	0	0	0	0	115.3
31	L	47	Very low	51.3	Low	149 Å²	149	110 Å²	110	78%	0.78	58%	0.578	S	S	*	*			trans	-143.4	87.1	179.7	-74.4	163.8	0	0	0	106.5	H29 S33	H29-L31 PolarHBondContact O-N 3.31Å; L31-S33 VanDerWaalsContact C-N 3.27Å; L31-S33 PolarHBondContact O-N 3.19Å
32	V	49.6	Very low	51.6	Low	67 Å²	67	107.4 Å²	107.4	41%	0.406	57%	0.566	S	S	.	*			trans	-74.2	92.6	163.1	-179.1	0	0	0	0	106	Q26 Y34	Q26-V32 HydrophobicContact CG-CG2 3.56Å; V32-Y34 HydrophobicContact CB-CD2 4.16Å; V32-Y34 HydrophobicContact CB-CE2 3.81Å; V32-Y34 HydrophobicContact CG1-CD1 4.09Å; V32-Y34 HydrophobicContact CG1-CD2 3.71Å; V32-Y34 HydrophobicContact CG1-CE1 3.95Å; V32-Y34 HydrophobicContact CG1-CE2 3.55Å; V32-Y34 HydrophobicContact CG1-CG 3.98Å; V32-Y34 VanDerWaalsContact O-CD2 3.24Å; V32-Y34 WeakPolarHBondContact O-CD2 3.47Å; V32-Y34 PolarHBondContact O-N 3.1Å
33	S	47.6	Very low	52	Low	90 Å²	90	104.8 Å²	104.8	63%	0.629	56%	0.557	S	S	*	*			trans	-64.3	97	159.7	-70.5	0	0	0	0	106.7	L31 D35	L31-S33 VanDerWaalsContact C-N 3.27Å; L31-S33 PolarHBondContact O-N 3.19Å; S33-D35 PolarHBondContact O-N 3.41Å
34	Y	54.3	Low	52.8	Low	84 Å²	84	110.3 Å²	110.3	33%	0.329	57%	0.571	S	S	.	*	T	Hydrogen-bonded Turn	trans	-64.2	10.4	165.1	-70	-87.2	0	0	0	112.4	V32 V36 L49 V53	V32-Y34 HydrophobicContact CB-CD2 4.16Å; V32-Y34 HydrophobicContact CB-CE2 3.81Å; V32-Y34 HydrophobicContact CG1-CD1 4.09Å; V32-Y34 HydrophobicContact CG1-CD2 3.71Å; V32-Y34 HydrophobicContact CG1-CE1 3.95Å; V32-Y34 HydrophobicContact CG1-CE2 3.55Å; V32-Y34 HydrophobicContact CG1-CG 3.98Å; V32-Y34 VanDerWaalsContact O-CD2 3.24Å; V32-Y34 WeakPolarHBondContact O-CD2 3.47Å; V32-Y34 PolarHBondContact O-N 3.1Å; Y34-V36 PolarHBondContact O-N 3Å; Y34-L49 HydrophobicContact CD1-CD1 4.31Å; Y34-L49 HydrophobicContact CD1-CD2 4.13Å; Y34-L49 HydrophobicContact CG-CD2 4.2Å; Y34-V53 HydrophobicContact CE1-CG1 4.1Å
35	D	51.3	Low	53.6	Low	143 Å²	143	104.7 Å²	104.7	77%	0.765	55%	0.547	S	S	*	.	T	Hydrogen-bonded Turn	trans	-84.1	10.7	-178.9	-143.9	-101.5	0	0	0	113.1	S33 P37	S33-D35 PolarHBondContact O-N 3.41Å; D35-P37 WeakPolarHBondContact O-CD 3.18Å
36	V	52.4	Low	54.5	Low	88 Å²	88	104.6 Å²	104.6	53%	0.533	54%	0.543	S	S	.	.	S	Bend	trans	-77.7	112.7	171.4	-177	0	0	0	0	107.5	Y34 F38	Y34-V36 PolarHBondContact O-N 3Å; V36-F38 HydrophobicContact CB-CE2 4.32Å; V36-F38 HydrophobicContact CB-CZ 4.42Å; V36-F38 WeakPolarHBondContact O-CD2 3.46Å; V36-F38 WeakPolarHBondContact O-CE2 3.3Å; V36-F38 PolarHBondContact O-N 3.05Å
37	P	55.6	Low	55	Low	84 Å²	84	100.9 Å²	100.9	55%	0.545	53%	0.526	S	S	.	.			trans	-62.7	106.2	173	25.9	-32.8	0	0	0	107.9	D35 T39	D35-P37 WeakPolarHBondContact O-CD 3.18Å; P37-T39 PolarHBondContact O-N 2.06Å
38	F	61	Low	55.4	Low	65 Å²	65	98.5 Å²	98.5	29%	0.285	51%	0.513	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-75.1	125.2	171.3	-68.8	-84.3	0	0	0	107.4	V36 L47 Y65	V36-F38 HydrophobicContact CB-CE2 4.32Å; V36-F38 HydrophobicContact CB-CZ 4.42Å; V36-F38 WeakPolarHBondContact O-CD2 3.46Å; V36-F38 WeakPolarHBondContact O-CE2 3.3Å; V36-F38 PolarHBondContact O-N 3.05Å; F38-L47 HydrophobicContact CB-CB 3.96Å; F38-L47 HydrophobicContact CB-CD1 3.74Å; F38-L47 HydrophobicContact CB-CG 4.5Å; F38-L47 VanDerWaalsContact O-CB 3.3Å; F38-L47 WeakPolarHBondContact O-CB 3.16Å; F38-L47 WeakPolarHBondContact O-CD1 3.24Å; F38-L47 PolarHBondContact O-N 3.38Å; F38-Y65 HydrophobicContact CD2-CD1 4.39Å; F38-Y65 AromaticContact CD2-CE1 3.55Å; F38-Y65 HydrophobicContact CD2-CE1 3.55Å; F38-Y65 AromaticContact CE2-CE1 3.94Å; F38-Y65 HydrophobicContact CE2-CE1 3.94Å; F38-Y65 WeakPolarHBondContact CE2-OH 3.33Å; F38-Y65 HydrophobicContact CG-CE1 4.25Å
39	T	61.4	Low	55.8	Low	74 Å²	74	91.7 Å²	91.7	45%	0.454	49%	0.491	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-105.5	123.2	174.6	-55.6	0	0	0	0	107.9	P37 W41 K44 C45	P37-T39 PolarHBondContact O-N 2.06Å; T39-W41 PolarHBondContact O-N 3.09Å; T39-K44 HydrophobicContact CG2-CB 4.42Å; T39-K44 WeakPolarHBondContact CG2-O 3.43Å; T39-C45 WeakPolarHBondContact CA-O 3.41Å
40	C	59.7	Low	56	Low	6 Å²	6	89.6 Å²	89.6	4%	0.041	48%	0.484	C	S	.	.			trans	-68.2	122.5	176.7	-178.9	0	0	0	0	109	C12 K42 C43 K44 C45 L47	C12-C40 HydrophobicContact CB-CB 4.13Å; C12-C40 WeakPolarHBondContact CB-SG 3.26Å; C12-C40 WeakPolarHBondContact SG-CB 3.17Å; C12-C40 CovalentContact SG-SG 2.06Å; C12-C40 PolarHBondContact SG-SG 3.18Å; C40-K42 PolarHBondContact O-N 3.33Å; C40-C43 WeakPolarHBondContact CB-SG 3.23Å; C40-C43 PolarHBondContact O-N 3.38Å; C40-K44 VanDerWaalsContact O-CA 3.28Å; C40-K44 WeakPolarHBondContact O-CA 3.4Å; C40-K44 PolarHBondContact O-N 3.43Å; C40-C45 PolarHBondContact N-O 2.96Å; C40-L47 HydrophobicContact CB-CD1 3.89Å; C40-L47 HydrophobicContact CB-CG 4.43Å
41	W	56.5	Low	56.2	Low	239 Å²	239	88 Å²	88	91%	0.905	47%	0.468	S	S	*	.	T	Hydrogen-bonded Turn	trans	-53.7	-31	-177.3	-177.5	-91.5	0	0	0	113.2	T39	T39-W41 PolarHBondContact O-N 3.09Å
42	K	55.6	Low	56.1	Low	125 Å²	125	87.4 Å²	87.4	54%	0.543	47%	0.466	S	S	.	.	T	Hydrogen-bonded Turn	trans	-84.1	-44.7	-175	-165	171	-176.2	177.6	0	113.9	V11 C40	V11-K42 HydrophobicContact CG1-CD 4.13Å; C40-K42 PolarHBondContact O-N 3.33Å
43	C	58.3	Low	56.1	Low	35 Å²	35	85 Å²	85	24%	0.236	45%	0.451	C	S	.	.	T	Hydrogen-bonded Turn	trans	-103.4	-6.2	-177.7	52.7	0	0	0	0	114.3	T8 C40 C45 C67	T8-C43 HydrophobicContact CG2-CB 3.65Å; C40-C43 WeakPolarHBondContact CB-SG 3.23Å; C40-C43 PolarHBondContact O-N 3.38Å; C43-C45 PolarHBondContact O-N 3.43Å; C43-C45 PolarHBondContact O-SG 2.79Å; C43-C67 PolarHBondContact SG-SG 3.01Å
44	K	65.2	Low	56	Low	172 Å²	172	85 Å²	85	75%	0.748	45%	0.451	S	S	*	.			trans	55.4	13.2	-174.1	-58.9	-168.5	178	-174.8	0	114.7	T39 C40	T39-K44 HydrophobicContact CG2-CB 4.42Å; T39-K44 WeakPolarHBondContact CG2-O 3.43Å; C40-K44 VanDerWaalsContact O-CA 3.28Å; C40-K44 WeakPolarHBondContact O-CA 3.4Å; C40-K44 PolarHBondContact O-N 3.43Å
45	C	62.2	Low	55.4	Low	20 Å²	20	91.3 Å²	91.3	14%	0.135	48%	0.475	C	S	.	.			trans	-76.7	146.3	176.8	-57.5	0	0	0	0	110.6	T39 C40 C43 L47 C67	T39-C45 WeakPolarHBondContact CA-O 3.41Å; C40-C45 PolarHBondContact N-O 2.96Å; C43-C45 PolarHBondContact O-N 3.43Å; C43-C45 PolarHBondContact O-SG 2.79Å; C45-L47 PolarHBondContact O-N 3.03Å; C45-C67 WeakPolarHBondContact CB-SG 3.47Å; C45-C67 VanDerWaalsContact SG-SG 3.65Å
46	H	63.9	Low	54.9	Low	126 Å²	126	92.4 Å²	92.4	58%	0.583	47%	0.473	S	S	*	.	E	Extended strand (participates in β ladder)	trans	-69.1	121.3	167.1	-74.2	-89.8	0	0	0	109.3	A48	H46-A48 PolarHBondContact O-N 2.7Å
47	L	59.3	Low	54.7	Low	16 Å²	16	89.3 Å²	89.3	8%	0.084	45%	0.454	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-80.7	110	170.4	-71.2	137.3	0	0	0	107	I16 F38 C40 C45 Y65 C67	I16-L47 HydrophobicContact CD1-CD2 4.42Å; F38-L47 HydrophobicContact CB-CB 3.96Å; F38-L47 HydrophobicContact CB-CD1 3.74Å; F38-L47 HydrophobicContact CB-CG 4.5Å; F38-L47 VanDerWaalsContact O-CB 3.3Å; F38-L47 WeakPolarHBondContact O-CB 3.16Å; F38-L47 WeakPolarHBondContact O-CD1 3.24Å; F38-L47 PolarHBondContact O-N 3.38Å; C40-L47 HydrophobicContact CB-CD1 3.89Å; C40-L47 HydrophobicContact CB-CG 4.43Å; C45-L47 PolarHBondContact O-N 3.03Å; L47-Y65 HydrophobicContact CB-CD1 4.12Å; L47-Y65 HydrophobicContact CB-CG 4.5Å; L47-Y65 VanDerWaalsContact CD2-CB 3.48Å; L47-Y65 HydrophobicContact CD2-CG 4.41Å; L47-C67 HydrophobicContact CD2-CB 4.38Å
48	A	57.2	Low	54.2	Low	57 Å²	57	94.6 Å²	94.6	47%	0.471	47%	0.469	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-81.8	133.3	168.8	0	0	0	0	0	108.1	H46 L50 Q66	H46-A48 PolarHBondContact O-N 2.7Å; A48-L50 PolarHBondContact O-N 3.49Å; A48-Q66 PolarHBondContact N-O 3.44Å; A48-Q66 PolarHBondContact O-N 3.31Å
49	L	58	Low	53.5	Low	58 Å²	58	100 Å²	100	30%	0.304	50%	0.495	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-61.6	116.7	170.7	-164.7	77.5	0	0	0	107.9	Y34 G51 V53 V63 Y65	Y34-L49 HydrophobicContact CD1-CD1 4.31Å; Y34-L49 HydrophobicContact CD1-CD2 4.13Å; Y34-L49 HydrophobicContact CG-CD2 4.2Å; L49-G51 PolarHBondContact O-N 3.33Å; L49-V53 HydrophobicContact CD1-CG2 3.75Å; L49-V53 HydrophobicContact CD2-CB 3.91Å; L49-V53 HydrophobicContact CD2-CG2 3.46Å; L49-V53 VanDerWaalsContact CD2-CG2 3.46Å; L49-V53 HydrophobicContact CG-CB 4.43Å; L49-V53 HydrophobicContact CG-CG2 3.49Å; L49-V53 VanDerWaalsContact CG-CG2 3.49Å; L49-V63 HydrophobicContact CD1-CG1 3.67Å; L49-Y65 HydrophobicContact CD1-CD1 4.18Å; L49-Y65 HydrophobicContact CD1-CE1 3.66Å
50	L	55.2	Low	52.9	Low	97 Å²	97	102.5 Å²	102.5	51%	0.508	50%	0.503	S	S	.	.			trans	-89.1	103.2	-179.3	-148	83.8	0	0	0	109.6	A48 Q66	A48-L50 PolarHBondContact O-N 3.49Å; L50-Q66 HydrophobicContact CB-CB 4.24Å; L50-Q66 HydrophobicContact CD1-CB 3.67Å; L50-Q66 HydrophobicContact CD1-CG 4.34Å; L50-Q66 HydrophobicContact CD2-CB 4.42Å; L50-Q66 HydrophobicContact CG-CB 4.32Å
51	G	48.6	Very low	52.6	Low	53 Å²	53	108.2 Å²	108.2	55%	0.546	53%	0.533	S	S	.	.	S	Bend	trans	95.8	162.8	172.6	0	0	0	0	0	114.6	L49 V53	L49-G51 PolarHBondContact O-N 3.33Å; G51-V53 WeakPolarHBondContact O-CG2 3.3Å; G51-V53 PolarHBondContact O-N 3.17Å
52	D	46.3	Very low	52.4	Low	136 Å²	136	102.3 Å²	102.3	73%	0.727	52%	0.518	S	S	*	.			trans	-69.8	91.4	-177	-149.4	-58	0	0	0	110.2	S54	D52-S54 PolarHBondContact O-N 3.37Å; D52-S54 VanDerWaalsContact O-N 3.1Å; D52-S54 VanDerWaalsContact OD1-CB 3.23Å; D52-S54 WeakPolarHBondContact OD1-CB 3.28Å; D52-S54 PolarHBondContact OD1-OG 3.31Å
53	V	49.7	Very low	52.3	Low	17 Å²	17	98 Å²	98	10%	0.103	50%	0.502	C	S	.	.	T	Hydrogen-bonded Turn	trans	-74.8	7	-176.6	-169.7	0	0	0	0	111.9	Y34 L49 G51 R55 V57 V63	Y34-V53 HydrophobicContact CE1-CG1 4.1Å; L49-V53 HydrophobicContact CD1-CG2 3.75Å; L49-V53 HydrophobicContact CD2-CB 3.91Å; L49-V53 HydrophobicContact CD2-CG2 3.46Å; L49-V53 VanDerWaalsContact CD2-CG2 3.46Å; L49-V53 HydrophobicContact CG-CB 4.43Å; L49-V53 HydrophobicContact CG-CG2 3.49Å; L49-V53 VanDerWaalsContact CG-CG2 3.49Å; G51-V53 WeakPolarHBondContact O-CG2 3.3Å; G51-V53 PolarHBondContact O-N 3.17Å; V53-R55 VanDerWaalsContact C-N 3.25Å; V53-R55 PolarHBondContact O-N 3.48Å; V53-V57 HydrophobicContact CG1-CB 4.13Å; V53-V57 HydrophobicContact CG1-CG2 3.14Å; V53-V63 HydrophobicContact CG1-CG1 4.5Å; V53-V63 HydrophobicContact CG1-CG2 4.47Å
54	S	45.2	Very low	52.1	Low	90 Å²	90	101.5 Å²	101.5	63%	0.629	52%	0.517	S	S	*	.	T	Hydrogen-bonded Turn	trans	-68.3	-17.5	-176	-55.7	0	0	0	0	114.5	D52	D52-S54 PolarHBondContact O-N 3.37Å; D52-S54 VanDerWaalsContact O-N 3.1Å; D52-S54 VanDerWaalsContact OD1-CB 3.23Å; D52-S54 WeakPolarHBondContact OD1-CB 3.28Å; D52-S54 PolarHBondContact OD1-OG 3.31Å
55	R	40.8	Very low	51.8	Low	217 Å²	217	94 Å²	94	82%	0.819	48%	0.484	S	S	*	.	T	Hydrogen-bonded Turn	trans	-128.6	-20.8	-175.7	-70.6	-176.6	178.7	176.3	0.1	116.1	V53	V53-R55 VanDerWaalsContact C-N 3.25Å; V53-R55 PolarHBondContact O-N 3.48Å
56	F	41.6	Very low	51.3	Low	165 Å²	165	97.6 Å²	97.6	72%	0.724	50%	0.499	S	S	*	.	T	Hydrogen-bonded Turn	trans	-85.9	-29.9	-175.9	-96.4	-90.3	0	0	0	114.3	F58 H59 M60	F56-F58 PolarHBondContact O-N 3.44Å; F56-H59 PolarHBondContact O-N 3Å; F56-M60 PolarHBondContact O-N 3.46Å; F56-M60 VanDerWaalsContact O-N 3.1Å
57	V	48	Very low	51.1	Low	24 Å²	24	92 Å²	92	15%	0.145	47%	0.474	C	S	.	.	T	Hydrogen-bonded Turn	trans	-68.3	-22.5	-179.5	167.8	0	0	0	0	113.1	V53 H59 M60 V63	V53-V57 HydrophobicContact CG1-CB 4.13Å; V53-V57 HydrophobicContact CG1-CG2 3.14Å; V57-H59 VanDerWaalsContact C-N 3.26Å; V57-H59 PolarHBondContact O-N 3.33Å; V57-M60 WeakPolarHBondContact CA-O 3.26Å; V57-V63 HydrophobicContact CG2-CG2 3.64Å
58	F	45.3	Very low	50.9	Low	195 Å²	195	95.8 Å²	95.8	86%	0.855	49%	0.494	S	S	*	.	T	Hydrogen-bonded Turn	trans	-71.6	-20.7	179.7	-126	-89.3	0	0	0	113.6	F56	F56-F58 PolarHBondContact O-N 3.44Å
59	H	46.1	Very low	50.9	Low	178 Å²	178	97 Å²	97	82%	0.824	49%	0.492	S	S	*	.	T	Hydrogen-bonded Turn	trans	-116.4	-26.4	-177.8	-102.6	-91.7	0	0	0	113.7	F56 V57	F56-H59 PolarHBondContact O-N 3Å; V57-H59 VanDerWaalsContact C-N 3.26Å; V57-H59 PolarHBondContact O-N 3.33Å
60	M	47.9	Very low	50.7	Low	126 Å²	126	99.4 Å²	99.4	62%	0.621	51%	0.51	S	S	*	.	S	Bend	trans	-137.8	119.2	175.9	-69.1	-160.1	167.7	0	0	108.4	F56 V57 I62	F56-M60 PolarHBondContact O-N 3.46Å; F56-M60 VanDerWaalsContact O-N 3.1Å; V57-M60 WeakPolarHBondContact CA-O 3.26Å; M60-I62 PolarHBondContact O-N 3.37Å
61	N	53	Low	50.3	Low	126 Å²	126	106.8 Å²	106.8	67%	0.674	54%	0.541	S	S	*	.			trans	-73.3	49.2	-175.9	-152.4	6.9	0	0	0	111.7
62	I	52.7	Low	50.4	Low	116 Å²	116	109.5 Å²	109.5	60%	0.595	54%	0.541	S	S	*	.			trans	-124.8	109.8	-174.7	-56.3	177.1	0	0	0	107.6	M60 I64	M60-I62 PolarHBondContact O-N 3.37Å; I62-I64 HydrophobicContact CG2-CG1 4.01Å
63	V	54.7	Low	50.6	Low	35 Å²	35	108.1 Å²	108.1	21%	0.212	53%	0.531	C	S	.	.			trans	-105.6	117.6	169.2	-171.2	0	0	0	0	107.7	L49 V53 V57 Y65	L49-V63 HydrophobicContact CD1-CG1 3.67Å; V53-V63 HydrophobicContact CG1-CG1 4.5Å; V53-V63 HydrophobicContact CG1-CG2 4.47Å; V57-V63 HydrophobicContact CG2-CG2 3.64Å; V63-Y65 HydrophobicContact CB-CD2 4.29Å; V63-Y65 HydrophobicContact CB-CE2 3.68Å; V63-Y65 HydrophobicContact CG1-CD2 3.82Å; V63-Y65 HydrophobicContact CG1-CE1 4.23Å; V63-Y65 HydrophobicContact CG1-CE2 3.24Å; V63-Y65 VanDerWaalsContact CG1-CZ 3.48Å
64	I	54.2	Low	50.7	Low	108 Å²	108	113.1 Å²	113.1	55%	0.554	56%	0.555	S	S	*	*	P	Polyproline II helix	trans	-94.9	117.2	176.7	-54.7	177.5	0	0	0	107.6	I62	I62-I64 HydrophobicContact CG2-CG1 4.01Å
65	Y	57.7	Low	51	Low	15 Å²	15	114.5 Å²	114.5	6%	0.059	55%	0.55	C	S	.	*	E	Extended strand (participates in β ladder)	trans	-102.3	134.6	173.1	-66.2	-94	0	0	0	109.4	I16 F38 L47 L49 V63	I16-Y65 HydrophobicContact CD1-CD2 3.59Å; I16-Y65 HydrophobicContact CD1-CE2 4.24Å; I16-Y65 HydrophobicContact CD1-CG 4.04Å; I16-Y65 HydrophobicContact CG1-CD2 4.46Å; I16-Y65 HydrophobicContact CG2-CD2 3.78Å; I16-Y65 HydrophobicContact CG2-CE2 3.56Å; F38-Y65 HydrophobicContact CD2-CD1 4.39Å; F38-Y65 AromaticContact CD2-CE1 3.55Å; F38-Y65 HydrophobicContact CD2-CE1 3.55Å; F38-Y65 AromaticContact CE2-CE1 3.94Å; F38-Y65 HydrophobicContact CE2-CE1 3.94Å; F38-Y65 WeakPolarHBondContact CE2-OH 3.33Å; F38-Y65 HydrophobicContact CG-CE1 4.25Å; L47-Y65 HydrophobicContact CB-CD1 4.12Å; L47-Y65 HydrophobicContact CB-CG 4.5Å; L47-Y65 VanDerWaalsContact CD2-CB 3.48Å; L47-Y65 HydrophobicContact CD2-CG 4.41Å; L49-Y65 HydrophobicContact CD1-CD1 4.18Å; L49-Y65 HydrophobicContact CD1-CE1 3.66Å; V63-Y65 HydrophobicContact CB-CD2 4.29Å; V63-Y65 HydrophobicContact CB-CE2 3.68Å; V63-Y65 HydrophobicContact CG1-CD2 3.82Å; V63-Y65 HydrophobicContact CG1-CE1 4.23Å; V63-Y65 HydrophobicContact CG1-CE2 3.24Å; V63-Y65 VanDerWaalsContact CG1-CZ 3.48Å
66	Q	52.5	Low	51.7	Low	94 Å²	94	108.1 Å²	108.1	44%	0.439	53%	0.534	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-102.2	123.9	172.3	-167.8	170.3	-17.2	0	0	109.4	A48 L50 N68	A48-Q66 PolarHBondContact N-O 3.44Å; A48-Q66 PolarHBondContact O-N 3.31Å; L50-Q66 HydrophobicContact CB-CB 4.24Å; L50-Q66 HydrophobicContact CD1-CB 3.67Å; L50-Q66 HydrophobicContact CD1-CG 4.34Å; L50-Q66 HydrophobicContact CD2-CB 4.42Å; L50-Q66 HydrophobicContact CG-CB 4.32Å; Q66-N68 PolarHBondContact O-N 3.5Å
67	C	58.6	Low	52.3	Low	10 Å²	10	104.3 Å²	104.3	7%	0.068	52%	0.521	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-79.1	110.6	169.4	178.2	0	0	0	0	108.4	L9 C43 C45 L47	L9-C67 HydrophobicContact CD2-CB 3.86Å; C43-C67 PolarHBondContact SG-SG 3.01Å; C45-C67 WeakPolarHBondContact CB-SG 3.47Å; C45-C67 VanDerWaalsContact SG-SG 3.65Å; L47-C67 HydrophobicContact CD2-CB 4.38Å
68	N	56.4	Low	52.6	Low	94 Å²	94	110 Å²	110	50%	0.503	55%	0.548	S	S	.	.			trans	-88	114.1	174.1	-162.2	-3.6	0	0	0	109.4	Q66 T70	Q66-N68 PolarHBondContact O-N 3.5Å; N68-T70 PolarHBondContact ND2-OG1 3.5Å; N68-T70 VanDerWaalsContact ND2-OG1 3.1Å; N68-T70 PolarHBondContact O-N 3.43Å; N68-T70 PolarHBondContact OD1-OG1 2.98Å
69	L	57.4	Low	53.2	Low	82 Å²	82	103.5 Å²	103.5	43%	0.429	52%	0.524	S	S	.	.			trans	-87.9	28.5	-176.8	-78	156.7	0	0	0	112.6	M5 H71	M5-L69 HydrophobicContact CB-CD1 4.39Å; M5-L69 HydrophobicContact CE-CD1 4.39Å; M5-L69 HydrophobicContact CG-CD1 3.95Å; L69-H71 VanDerWaalsContact C-N 3.34Å; L69-H71 PolarHBondContact O-N 3.17Å
70	T	53.5	Low	53.8	Low	110 Å²	110	97.3 Å²	97.3	68%	0.675	50%	0.499	S	S	*	.			trans	-92.5	24	-174.5	34.5	0	0	0	0	114.5	N68	N68-T70 PolarHBondContact ND2-OG1 3.5Å; N68-T70 VanDerWaalsContact ND2-OG1 3.1Å; N68-T70 PolarHBondContact O-N 3.43Å; N68-T70 PolarHBondContact OD1-OG1 2.98Å
71	H	47.2	Very low	54.3	Low	251 Å²	251	94.6 Å²	94.6	100%	1.162	49%	0.488	S	S	*	.			trans	-132.2	0	174.7	-115	-79	0	0	0	112.1	L69	L69-H71 VanDerWaalsContact C-N 3.34Å; L69-H71 PolarHBondContact O-N 3.17Å

Retrieved 71 of 71 residues in 45 ms (Link to these results)

U.S. Privacy Notice - Disclaimer / Registrations / Copyright Statement - Linking Policy - Notice of Privacy Practices (HIPAA) - Notice of Non‑Discrimination
© Copyright 2026 St. Jude Children's Research Hospital, a not-for-profit, section 501(c)(3).