A0A5K4F898_SCHMA Loading...

GRANULINS domain-containing protein

AlphaFold DB , UniProt , Accession A0A5K4F898, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 51 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M30.7Very low39.1Very low210 Ų210116.6 Ų116.6100%1.03462%0.618SS**  01020167.2169.9152.500107.5I3M1-I3 HydrophobicContact CE-CD1 3.96Å; M1-I3 HydrophobicContact CE-CG1 3.66Å; M1-I3 HydrophobicContact CG-CG1 3.95Å; M1-I3 PolarHBondContact O-N 3.23Å
2V28Very low39.5Very low125 Ų125122.2 Ų122.276%0.75864%0.638SS**  trans-77.6105.9172.6-179.90000106.1F4V2-F4 HydrophobicContact CG1-CE2 4.42Å; V2-F4 PolarHBondContact O-N 3.03Å
3I31.6Very low40.2Very low108 Ų108124.5 Ų124.555%0.55465%0.652SS**  trans-77.6106.5176.9-55.8174000105.8M1 L5M1-I3 HydrophobicContact CE-CD1 3.96Å; M1-I3 HydrophobicContact CE-CG1 3.66Å; M1-I3 HydrophobicContact CG-CG1 3.95Å; M1-I3 PolarHBondContact O-N 3.23Å; I3-L5 HydrophobicContact CG2-CD1 4.22Å; I3-L5 HydrophobicContact CG2-CG 4.04Å; I3-L5 PolarHBondContact O-N 3.32Å
4F38.6Very low40.6Very low173 Ų173122.4 Ų122.476%0.75965%0.647SS**  trans-69.583.1163.2-70-89.2000107.3V2 G6V2-F4 HydrophobicContact CG1-CE2 4.42Å; V2-F4 PolarHBondContact O-N 3.03Å; F4-G6 PolarHBondContact O-N 3.01Å; F4-G6 VanDerWaalsContact O-N 3.15Å
5L38.7Very low41.3Very low118 Ų118121.3 Ų121.362%0.61865%0.65SS**  trans-59.3115.9160.9-80128.2000105.7I3 F7I3-L5 HydrophobicContact CG2-CD1 4.22Å; I3-L5 HydrophobicContact CG2-CG 4.04Å; I3-L5 PolarHBondContact O-N 3.32Å; L5-F7 VanDerWaalsContact C-N 3.28Å; L5-F7 HydrophobicContact CB-CE2 4.2Å; L5-F7 HydrophobicContact CB-CZ 4.36Å; L5-F7 WeakPolarHBondContact O-CD2 3.2Å; L5-F7 WeakPolarHBondContact O-CE2 3.15Å; L5-F7 PolarHBondContact O-N 2.96Å
6G41.2Very low41.7Very low69 Ų69115 Ų11571%0.71162%0.618SS**  trans-62.592.1176.300000109.3F4 N8F4-G6 PolarHBondContact O-N 3.01Å; F4-G6 VanDerWaalsContact O-N 3.15Å; G6-N8 PolarHBondContact O-N 3.47Å
7F44.4Very low42.2Very low124 Ų124113.8 Ų113.854%0.54462%0.62SS.*  trans-67.398.4172.3-68-82.3000107.3L5 C9 P32L5-F7 VanDerWaalsContact C-N 3.28Å; L5-F7 HydrophobicContact CB-CE2 4.2Å; L5-F7 HydrophobicContact CB-CZ 4.36Å; L5-F7 WeakPolarHBondContact O-CD2 3.2Å; L5-F7 WeakPolarHBondContact O-CE2 3.15Å; L5-F7 PolarHBondContact O-N 2.96Å; F7-C9 PolarHBondContact O-N 2.96Å; F7-P32 HydrophobicContact CD2-CG 4.43Å
8N43.1Very low42.9Very low144 Ų144109.3 Ų109.377%0.7760%0.598SS**  trans-64.499.8168.4-98.1-90.2000107.7G6 Q10G6-N8 PolarHBondContact O-N 3.47Å; N8-Q10 PolarHBondContact O-N 3.02Å
9C45.6Very low43.3Very low9 Ų9109.1 Ų109.16%0.06161%0.605CS.*BIsolated β-bridgetrans-72.5116.2166-810000108.3F7 S11 C16 C28 C31F7-C9 PolarHBondContact O-N 2.96Å; C9-S11 VanDerWaalsContact C-N 3.28Å; C9-S11 PolarHBondContact O-N 3.18Å; C9-C16 HydrophobicContact CB-CB 4.08Å; C9-C28 HydrophobicContact CB-CB 4.37Å; C9-C28 WeakPolarHBondContact CB-SG 3.18Å; C9-C28 VanDerWaalsContact SG-SG 3.64Å; C9-C31 PolarHBondContact SG-N 2.02Å; C9-C31 PolarHBondContact SG-SG 3.43Å
10Q42.4Very low43.7Very low184 Ų184107.8 Ų107.886%0.8661%0.609SS**  trans-64.390.5170.7-87-173.8-1.400109.3N8N8-Q10 PolarHBondContact O-N 3.02Å
11S46.3Very low43.9Very low19 Ų19105.7 Ų105.713%0.13361%0.612CS.*  trans-90.9135.3156.1-55.30000106.4C9 D13 T14 N27C9-S11 VanDerWaalsContact C-N 3.28Å; C9-S11 PolarHBondContact O-N 3.18Å; S11-D13 PolarHBondContact O-N 2.85Å; S11-T14 WeakPolarHBondContact CB-O 3.37Å; S11-T14 PolarHBondContact OG-O 3.08Å; S11-N27 PolarHBondContact OG-O 2.96Å; S11-N27 VanDerWaalsContact OG-O 3.08Å
12Q43.8Very low45.1Very low183 Ų18396.3 Ų96.386%0.85557%0.567SS**THydrogen-bonded Turntrans-61.3-11-175.1-82-177.614.500114.7N27Q12-N27 PolarHBondContact N-OD1 3.13Å
13D47.8Very low46.1Very low153 Ų15395.2 Ų95.282%0.81856%0.562SS**THydrogen-bonded Turntrans-145.45.9-176.4-90.8-84.1000115.4S11S11-D13 PolarHBondContact O-N 2.85Å
14T46.7Very low46.9Very low94 Ų9496.4 Ų96.458%0.57757%0.57SS**SBendtrans-157.9129.7-176.2-23.80000113.6S11 C16S11-T14 WeakPolarHBondContact CB-O 3.37Å; S11-T14 PolarHBondContact OG-O 3.08Å; T14-C16 PolarHBondContact O-N 3.4Å
15P49.9Very low47.4Very low107 Ų10789.3 Ų89.370%0.69554%0.541SS*.  trans-62.4109.8173.425.4-33000109.6
16C48.1Very low47.9Very low20 Ų2092.7 Ų92.714%0.13555%0.546CS..BIsolated β-bridgetrans-90.2110.2179.4-176.70000109.4C9 T14 C18 C28C9-C16 HydrophobicContact CB-CB 4.08Å; T14-C16 PolarHBondContact O-N 3.4Å; C16-C18 PolarHBondContact O-N 3.33Å; C16-C28 HydrophobicContact CB-CB 3.99Å; C16-C28 WeakPolarHBondContact CB-SG 3.05Å; C16-C28 WeakPolarHBondContact SG-CB 3.15Å; C16-C28 CovalentContact SG-SG 2.02Å; C16-C28 PolarHBondContact SG-SG 3.31Å
17S50.1Low48.2Very low95 Ų9592.8 Ų92.866%0.66453%0.53SS*.  trans-80.4111.3176.2-72.20000110.3S19S17-S19 PolarHBondContact O-N 3.04Å
18C54.4Low48.6Very low33 Ų3387.3 Ų87.322%0.22351%0.507CS..G310 helixtrans-65.80.5175.4-57.60000114.4C16 A20 C31C16-C18 PolarHBondContact O-N 3.33Å; C18-A20 VanDerWaalsContact C-N 3.31Å; C18-A20 PolarHBondContact O-N 3.09Å; C18-C31 VanDerWaalsContact CA-SG 3.52Å; C18-C31 HydrophobicContact CB-CB 3.91Å; C18-C31 WeakPolarHBondContact CB-SG 3.29Å; C18-C31 WeakPolarHBondContact SG-CB 2.9Å; C18-C31 CovalentContact SG-SG 2.03Å; C18-C31 PolarHBondContact SG-SG 2.99Å
19S51.8Low48.9Very low104 Ų10487.5 Ų87.573%0.72750%0.501SS*.G310 helixtrans-76.6-1.7-163.9-53.50000116.4S17S17-S19 PolarHBondContact O-N 3.04Å
20A51Low49.2Very low83 Ų8390.1 Ų90.169%0.68653%0.53SS*.G310 helixtrans-147.536-172.200000115.1C18C18-A20 VanDerWaalsContact C-N 3.31Å; C18-A20 PolarHBondContact O-N 3.09Å
21G48.7Very low49.9Very low64 Ų6481.8 Ų81.866%0.6649%0.492SS*.SBendtrans74.439.8174.700000114.6P23G21-P23 VanDerWaalsContact C-CD 3.47Å; G21-P23 VanDerWaalsContact O-N 3.12Å
22C54.2Low50.1Low14 Ų1485.3 Ų85.310%0.09551%0.514CS..  trans2961.3178.2-60.50000116.4N24 C25 C31 C34C22-N24 PolarHBondContact O-N 3.29Å; C22-N24 VanDerWaalsContact O-N 3.13Å; C22-C25 HydrophobicContact CB-CB 3.65Å; C22-C25 WeakPolarHBondContact CB-SG 3.34Å; C22-C25 WeakPolarHBondContact O-CB 2.98Å; C22-C25 PolarHBondContact O-N 2.88Å; C22-C25 VanDerWaalsContact SG-SG 3.62Å; C22-C31 VanDerWaalsContact SG-CB 3.55Å; C22-C34 HydrophobicContact CB-CB 3.84Å; C22-C34 WeakPolarHBondContact CB-SG 3.04Å; C22-C34 WeakPolarHBondContact SG-CB 3.47Å; C22-C34 CovalentContact SG-SG 2.02Å; C22-C34 PolarHBondContact SG-SG 2.96Å
23P49.8Very low50.4Low102 Ų10280.4 Ų80.466%0.66251%0.513SS*.THydrogen-bonded Turntrans-62.4-22.3174.325.6-33.7000112.1G21G21-P23 VanDerWaalsContact C-CD 3.47Å; G21-P23 VanDerWaalsContact O-N 3.12Å
24N47.5Very low50.5Low133 Ų13374 Ų7471%0.71148%0.479SS*.THydrogen-bonded Turntrans-114.443178.6-69.8-69.6000111.9C22 R26C22-N24 PolarHBondContact O-N 3.29Å; C22-N24 VanDerWaalsContact O-N 3.13Å; N24-R26 PolarHBondContact O-N 2.84Å
25C50.7Low50.7Low24 Ų2474 Ų7416%0.16248%0.481CS..G310 helixtrans-65.47-177.1-136.90000114.9C22 N27 C28 C47C22-C25 HydrophobicContact CB-CB 3.65Å; C22-C25 WeakPolarHBondContact CB-SG 3.34Å; C22-C25 WeakPolarHBondContact O-CB 2.98Å; C22-C25 PolarHBondContact O-N 2.88Å; C22-C25 VanDerWaalsContact SG-SG 3.62Å; C25-N27 PolarHBondContact O-N 3.47Å; C25-C28 PolarHBondContact O-N 2.03Å; C25-C47 PolarHBondContact O-SG 2.02Å
26R49.1Very low50.8Low188 Ų18876.6 Ų76.671%0.70949%0.487SS*.G310 helixtrans-56-14.2-176.2-148.8-178.6-169.8-172.33.9114.3N24 T45N24-R26 PolarHBondContact O-N 2.84Å; R26-T45 WeakPolarHBondContact O-CG2 2.94Å
27N47.3Very low50.7Low71 Ų7181.7 Ų81.738%0.3851%0.508SS..G310 helixtrans-148.510.6178.3-114.7-97000113.9S11 Q12 C25 K29S11-N27 PolarHBondContact OG-O 2.96Å; S11-N27 VanDerWaalsContact OG-O 3.08Å; Q12-N27 PolarHBondContact N-OD1 3.13Å; C25-N27 PolarHBondContact O-N 3.47Å; N27-K29 PolarHBondContact O-N 3.26Å
28C51.9Low50.6Low10 Ų1082.5 Ų82.57%0.06851%0.511CS..  trans-95.773.1-166.7-140.80000111C9 C16 C25 G30 C31C9-C28 HydrophobicContact CB-CB 4.37Å; C9-C28 WeakPolarHBondContact CB-SG 3.18Å; C9-C28 VanDerWaalsContact SG-SG 3.64Å; C16-C28 HydrophobicContact CB-CB 3.99Å; C16-C28 WeakPolarHBondContact CB-SG 3.05Å; C16-C28 WeakPolarHBondContact SG-CB 3.15Å; C16-C28 CovalentContact SG-SG 2.02Å; C16-C28 PolarHBondContact SG-SG 3.31Å; C25-C28 PolarHBondContact O-N 2.03Å; C28-G30 PolarHBondContact O-N 3.46Å; C28-C31 PolarHBondContact SG-SG 3.31Å
29K50.6Low50.2Low147 Ų14784.5 Ų84.564%0.63952%0.519SS*.THydrogen-bonded Turntrans-73.2120.3174-77.1-169.6173.7-172.10109.6N27N27-K29 PolarHBondContact O-N 3.26Å
30G51.7Low49.9Very low65 Ų6584 Ų8467%0.6751%0.513SS*.THydrogen-bonded Turntrans103.67.8169.400000117.3C28 P32C28-G30 PolarHBondContact O-N 3.46Å; G30-P32 WeakPolarHBondContact O-CD 3.15Å
31C55.7Low49.5Very low9 Ų986 Ų866%0.06151%0.507CS..  trans-69.1123.6171.1-80.10000110.8C9 C18 C22 C28 G33 C34C9-C31 PolarHBondContact SG-N 2.02Å; C9-C31 PolarHBondContact SG-SG 3.43Å; C18-C31 VanDerWaalsContact CA-SG 3.52Å; C18-C31 HydrophobicContact CB-CB 3.91Å; C18-C31 WeakPolarHBondContact CB-SG 3.29Å; C18-C31 WeakPolarHBondContact SG-CB 2.9Å; C18-C31 CovalentContact SG-SG 2.03Å; C18-C31 PolarHBondContact SG-SG 2.99Å; C22-C31 VanDerWaalsContact SG-CB 3.55Å; C28-C31 PolarHBondContact SG-SG 3.31Å; C31-G33 PolarHBondContact O-N 3.29Å; C31-C34 HydrophobicContact CB-CB 4.12Å; C31-C34 PolarHBondContact O-N 2.79Å
32P51.4Low49.3Very low92 Ų9289.2 Ų89.260%0.59752%0.516SS*.THydrogen-bonded Turntrans-65122.7169.126.3-31.2000109.6F7 G30F7-P32 HydrophobicContact CD2-CG 4.43Å; G30-P32 WeakPolarHBondContact O-CD 3.15Å
33G50.1Low48.6Very low80 Ų8092.3 Ų92.383%0.82555%0.55SS**THydrogen-bonded Turntrans105.1-3.4-177.600000115.4C31C31-G33 PolarHBondContact O-N 3.29Å
34C50.9Low48.1Very low18 Ų1891.8 Ų91.812%0.12254%0.541CS..SBendtrans-103.4129.8175.6-55.20000109.2C22 C31 I36C22-C34 HydrophobicContact CB-CB 3.84Å; C22-C34 WeakPolarHBondContact CB-SG 3.04Å; C22-C34 WeakPolarHBondContact SG-CB 3.47Å; C22-C34 CovalentContact SG-SG 2.02Å; C22-C34 PolarHBondContact SG-SG 2.96Å; C31-C34 HydrophobicContact CB-CB 4.12Å; C31-C34 PolarHBondContact O-N 2.79Å; C34-I36 PolarHBondContact O-N 3.15Å; C34-I36 VanDerWaalsContact O-N 3.13Å
35P50.1Low47.8Very low94 Ų9488 Ų8861%0.6152%0.523SS*.  trans-62.9118.8-175.624.5-33.7000109.8F37P35-F37 VanDerWaalsContact C-N 3.32Å; P35-F37 HydrophobicContact CB-CD2 3.98Å; P35-F37 HydrophobicContact CB-CE2 3.55Å; P35-F37 HydrophobicContact CB-CZ 4.01Å; P35-F37 HydrophobicContact CG-CD2 4.03Å; P35-F37 HydrophobicContact CG-CE2 3.39Å; P35-F37 HydrophobicContact CG-CZ 4.12Å; P35-F37 PolarHBondContact O-N 2.87Å
36I51.7Low47.2Very low162 Ų16290.3 Ų90.383%0.83154%0.536SS*.  trans-73.892.7169.9-55.8169.8000105.9C34C34-I36 PolarHBondContact O-N 3.15Å; C34-I36 VanDerWaalsContact O-N 3.13Å
37F45.7Very low46.7Very low128 Ų12884.5 Ų84.556%0.56152%0.524SS*.  trans-75.8132.3169-72.6-79.3000108.4P35 D39P35-F37 VanDerWaalsContact C-N 3.32Å; P35-F37 HydrophobicContact CB-CD2 3.98Å; P35-F37 HydrophobicContact CB-CE2 3.55Å; P35-F37 HydrophobicContact CB-CZ 4.01Å; P35-F37 HydrophobicContact CG-CD2 4.03Å; P35-F37 HydrophobicContact CG-CE2 3.39Å; P35-F37 HydrophobicContact CG-CZ 4.12Å; P35-F37 PolarHBondContact O-N 2.87Å; F37-D39 PolarHBondContact O-N 3.31Å
38P48.5Very low46.2Very low112 Ų11287.6 Ų87.673%0.72754%0.54SS*.  trans-61.4112.8169.725.5-30.8000107.1P40P38-P40 WeakPolarHBondContact O-CD 3.43Å; P38-P40 VanDerWaalsContact O-N 3.11Å
39D44.9Very low45.4Very low74 Ų7496.9 Ų96.940%0.39658%0.575SS.*  trans-53.8116.4174.3-69.4-72000108.1F37 F41F37-D39 PolarHBondContact O-N 3.31Å; D39-F41 PolarHBondContact O-N 3.31Å
40P46.3Very low44.4Very low93 Ų9399.2 Ų99.260%0.60459%0.585SS**SBendtrans-71.8-9176.525.8-28.8000112.1P38P38-P40 WeakPolarHBondContact O-CD 3.43Å; P38-P40 VanDerWaalsContact O-N 3.11Å
41F43.6Very low43.6Very low125 Ų125106.5 Ų106.555%0.54861%0.606SS.*SBendtrans-134.4116.4178-68.5-84.3000110.3D39 G43 I44D39-F41 PolarHBondContact O-N 3.31Å; F41-G43 PolarHBondContact O-N 3.14Å; F41-I44 HydrophobicContact CB-CB 4.1Å; F41-I44 HydrophobicContact CB-CD1 4.13Å; F41-I44 HydrophobicContact CB-CG1 4.24Å; F41-I44 HydrophobicContact CG-CD1 4.36Å; F41-I44 PolarHBondContact O-N 3.25Å
42P43.1Very low43Very low133 Ų133111.4 Ų111.486%0.86463%0.633SS**THydrogen-bonded Turntrans-61.8113.217025.8-31.1000108.5
43G40.7Very low42.6Very low78 Ų78112.4 Ų112.480%0.80464%0.635SS**THydrogen-bonded Turntrans107.5-0.3176.700000116.5F41F41-G43 PolarHBondContact O-N 3.14Å
44I38.4Very low42.2Very low92 Ų92114.2 Ų114.247%0.47263%0.625SS.*  trans-121.893.1175.5-55176.2000109.3F41 T46F41-I44 HydrophobicContact CB-CB 4.1Å; F41-I44 HydrophobicContact CB-CD1 4.13Å; F41-I44 HydrophobicContact CB-CG1 4.24Å; F41-I44 HydrophobicContact CG-CD1 4.36Å; F41-I44 PolarHBondContact O-N 3.25Å; I44-T46 VanDerWaalsContact C-N 3.34Å; I44-T46 HydrophobicContact CG2-CG2 3.8Å; I44-T46 PolarHBondContact O-N 3.13Å
45T41.2Very low41.7Very low53 Ų53119.9 Ų119.933%0.32565%0.654SS.*  trans-74.585.3175.4-43.60000109.7R26R26-T45 WeakPolarHBondContact O-CG2 2.94Å
46T37.7Very low41.1Very low73 Ų73121.5 Ų121.545%0.44866%0.657SS.*  trans-115.6104.6171.646.60000110I44 L48I44-T46 VanDerWaalsContact C-N 3.34Å; I44-T46 HydrophobicContact CG2-CG2 3.8Å; I44-T46 PolarHBondContact O-N 3.13Å; T46-L48 PolarHBondContact O-N 3.02Å
47C39.9Very low40.4Very low66 Ų66118.8 Ų118.845%0.44665%0.645SS.*  trans-68.2100.2164.6-60.30000108.6C25 Y49C25-C47 PolarHBondContact O-SG 2.02Å; C47-Y49 PolarHBondContact O-N 3.19Å; C47-Y49 VanDerWaalsContact O-N 3.14Å
48L37Very low40.1Very low136 Ų136118.1 Ų118.171%0.71265%0.651SS**  trans-69.3102.3166.4-86.7146.4000108T46 K50T46-L48 PolarHBondContact O-N 3.02Å; L48-K50 PolarHBondContact O-N 3.24Å
49Y34Very low39.4Very low205 Ų205118.6 Ų118.680%0.80465%0.646SS**  trans-69.8115164.8-161.8-90.3000107C47 I51C47-Y49 PolarHBondContact O-N 3.19Å; C47-Y49 VanDerWaalsContact O-N 3.14Å; Y49-I51 PolarHBondContact O-N 3.26Å
50K29.4Very low38.9Very low195 Ų195122.3 Ų122.385%0.84867%0.666SS**  trans-72.4114.2165.6-171.1170.7-178.8171.30106.1L48L48-K50 PolarHBondContact O-N 3.24Å
51I36Very low38.3Very low219 Ų219125 Ų125100%1.12367%0.672SS**  trans-55.50167.1-52.3165.2000108.2Y49Y49-I51 PolarHBondContact O-N 3.26Å

Retrieved 51 of 51 residues in 9.4 ms (Link to these results)