A0A5K4F8I4_SCHMA Loading...

Lymphocyte antigen 6E-like AlphaSync

AlphaFold DB , UniProt , Accession A0A5K4F8I4, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 13 aa.

						>A0A5K4F8I4_SCHMA|A0A5K4F8I4
MTTLSLMVRIDNF
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	64.8	Low	87.5	Confident	213 Å²	213	119.6 Å²	119.6	100%	1.049	62%	0.624	S	S	*	*				0	-42.9	0	-76.3	-178.6	-178.4	0	0	112.4	T3 S5	M1-T3 PolarHBondContact O-N 3.27Å; M1-S5 PolarHBondContact O-N 3.28Å; M1-S5 PolarHBondContact O-OG 2.77Å
2	T	75.1	Confident	87.2	Confident	107 Å²	107	120.9 Å²	120.9	66%	0.656	63%	0.632	S	S	*	*	H	α-helix	trans	-60.6	-37.2	178.2	47.5	0	0	0	0	114.3	S5 L6	T2-S5 PolarHBondContact O-OG 3.44Å; T2-L6 WeakPolarHBondContact O-CG 3.39Å; T2-L6 PolarHBondContact O-N 3.28Å
3	T	80.5	Confident	86.1	Confident	96 Å²	96	130 Å²	130	59%	0.589	66%	0.664	S	S	*	*	H	α-helix	trans	-69.5	-45.1	-177.9	-36.5	0	0	0	0	112.6	M1 S5 L6 M7	M1-T3 PolarHBondContact O-N 3.27Å; T3-S5 PolarHBondContact O-N 2.83Å; T3-L6 PolarHBondContact O-N 3.02Å; T3-M7 PolarHBondContact O-N 3.11Å; T3-M7 VanDerWaalsContact O-N 3.08Å; T3-M7 WeakPolarHBondContact O-CG 3.33Å
4	L	89.5	Confident	86.1	Confident	128 Å²	128	130 Å²	130	67%	0.67	66%	0.664	S	S	*	*	H	α-helix	trans	-62.8	-42.6	-179.3	-175.6	70.2	0	0	0	111.6	L6 M7 V8	L4-L6 VanDerWaalsContact C-N 3.31Å; L4-L6 PolarHBondContact O-N 3.47Å; L4-M7 PolarHBondContact O-N 3.03Å; L4-V8 WeakPolarHBondContact O-CG2 3.38Å; L4-V8 PolarHBondContact O-N 3.37Å
5	S	91.4	Very high	86.1	Confident	52 Å²	52	130 Å²	130	36%	0.364	66%	0.664	S	S	.	*	H	α-helix	trans	-66.3	-32.2	-179.6	50.9	0	0	0	0	112.9	M1 T2 T3 R9	M1-S5 PolarHBondContact O-N 3.28Å; M1-S5 PolarHBondContact O-OG 2.77Å; T2-S5 PolarHBondContact O-OG 3.44Å; T3-S5 PolarHBondContact O-N 2.83Å; S5-R9 PolarHBondContact O-N 3.41Å; S5-R9 WeakPolarHBondContact O-CG 3.48Å; S5-R9 WeakPolarHBondContact O-CD 3.44Å; S5-R9 VanDerWaalsContact O-CG 3.23Å
6	L	93.5	Very high	86.1	Confident	101 Å²	101	130 Å²	130	53%	0.529	66%	0.664	S	S	.	*	H	α-helix	trans	-71.8	-44.3	173.4	-68.6	173.5	0	0	0	111.8	T2 T3 L4 V8 R9 I10	T2-L6 WeakPolarHBondContact O-CG 3.39Å; T2-L6 PolarHBondContact O-N 3.28Å; T3-L6 PolarHBondContact O-N 3.02Å; L4-L6 VanDerWaalsContact C-N 3.31Å; L4-L6 PolarHBondContact O-N 3.47Å; L6-V8 PolarHBondContact O-N 3.08Å; L6-R9 PolarHBondContact O-N 3.32Å; L6-R9 VanDerWaalsContact O-N 3.16Å; L6-I10 WeakPolarHBondContact O-CG1 3.38Å; L6-I10 PolarHBondContact O-N 3.31Å
7	M	94.4	Very high	86.1	Confident	112 Å²	112	130 Å²	130	55%	0.552	66%	0.664	S	S	*	*	H	α-helix	trans	-62.2	-44.3	179.7	-65.7	-168.9	88.9	0	0	111.8	T3 L4 R9 I10 D11	T3-M7 PolarHBondContact O-N 3.11Å; T3-M7 VanDerWaalsContact O-N 3.08Å; T3-M7 WeakPolarHBondContact O-CG 3.33Å; L4-M7 PolarHBondContact O-N 3.03Å; M7-R9 VanDerWaalsContact C-N 3.26Å; M7-R9 PolarHBondContact O-N 2.97Å; M7-I10 PolarHBondContact O-N 3.16Å; M7-I10 CarbonylContact O-C 3.58Å; M7-D11 PolarHBondContact O-N 3.35Å
8	V	94.6	Very high	86.1	Confident	74 Å²	74	130 Å²	130	45%	0.448	66%	0.664	S	S	.	*	H	α-helix	trans	-59.6	-37.3	175.7	170.1	0	0	0	0	111.9	L4 L6 N12	L4-V8 WeakPolarHBondContact O-CG2 3.38Å; L4-V8 PolarHBondContact O-N 3.37Å; L6-V8 PolarHBondContact O-N 3.08Å; V8-N12 WeakPolarHBondContact CG1-ND2 3.23Å; V8-N12 WeakPolarHBondContact O-CB 3.44Å; V8-N12 PolarHBondContact O-N 2.98Å; V8-N12 VanDerWaalsContact O-N 3.11Å; V8-N12 PolarHBondContact O-ND2 3.2Å
9	R	93	Very high	86.1	Confident	178 Å²	178	130 Å²	130	67%	0.672	66%	0.664	S	S	*	*	H	α-helix	trans	-70.6	-32.8	176.3	-70.8	171.4	-171.2	-171.7	2.1	112.4	S5 L6 M7 F13	S5-R9 PolarHBondContact O-N 3.41Å; S5-R9 WeakPolarHBondContact O-CG 3.48Å; S5-R9 WeakPolarHBondContact O-CD 3.44Å; S5-R9 VanDerWaalsContact O-CG 3.23Å; L6-R9 PolarHBondContact O-N 3.32Å; L6-R9 VanDerWaalsContact O-N 3.16Å; M7-R9 VanDerWaalsContact C-N 3.26Å; M7-R9 PolarHBondContact O-N 2.97Å; R9-F13 PolarHBondContact O-N 3.44Å
10	I	94.8	Very high	86.1	Confident	122 Å²	122	130 Å²	130	63%	0.626	66%	0.664	S	S	*	*	H	α-helix	trans	-72.5	-40.1	175.6	-67.3	163.5	0	0	0	110.6	L6 M7 N12 F13	L6-I10 WeakPolarHBondContact O-CG1 3.38Å; L6-I10 PolarHBondContact O-N 3.31Å; M7-I10 PolarHBondContact O-N 3.16Å; M7-I10 CarbonylContact O-C 3.58Å; I10-N12 VanDerWaalsContact C-N 3.28Å; I10-N12 PolarHBondContact O-N 3.44Å; I10-F13 PolarHBondContact O-N 3.42Å
11	D	91.5	Very high	86.1	Confident	133 Å²	133	130 Å²	130	71%	0.711	66%	0.664	S	S	*	*	H	α-helix	trans	-66.2	-29.8	174.8	-85.8	-68.4	0	0	0	112.9	M7	M7-D11 PolarHBondContact O-N 3.35Å
12	N	84.1	Confident	87.9	Confident	135 Å²	135	123.1 Å²	123.1	72%	0.722	63%	0.632	S	S	*	*	T	Hydrogen-bonded Turn	trans	-88.1	-2.8	177	-76.4	-67.6	0	0	0	113.9	V8 I10	V8-N12 WeakPolarHBondContact CG1-ND2 3.23Å; V8-N12 WeakPolarHBondContact O-CB 3.44Å; V8-N12 PolarHBondContact O-N 2.98Å; V8-N12 VanDerWaalsContact O-N 3.11Å; V8-N12 PolarHBondContact O-ND2 3.2Å; I10-N12 VanDerWaalsContact C-N 3.28Å; I10-N12 PolarHBondContact O-N 3.44Å
13	F	72.2	Confident	89	Confident	239 Å²	239	124.5 Å²	124.5	100%	1.048	63%	0.63	S	S	*	*			trans	-94.4	0	174.8	180	-93.2	0	0	0	110.1	R9 I10	R9-F13 PolarHBondContact O-N 3.44Å; I10-F13 PolarHBondContact O-N 3.42Å

Retrieved 13 of 13 residues in 50.9 ms (Link to these results)

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