A0A5K4F922_SCHMA Loading...

Complex III subunit 9

Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The complex plays an important role in the uptake of multiple carbon sources present in different host niches.

AlphaFold DB , UniProt , Accession A0A5K4F922, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 62 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M67.5Low81.3Confident207 Ų207122.9 Ų122.9100%1.0256%0.556SS**  0-52.70-135.9-160-79.200112.7K3 Y4 V5M1-K3 PolarHBondContact O-N 2.68Å; M1-Y4 WeakPolarHBondContact O-CB 3.49Å; M1-Y4 PolarHBondContact O-N 3.32Å; M1-V5 PolarHBondContact O-N 3.34Å
2L80.3Confident81.6Confident157 Ų157121.8 Ų121.882%0.82255%0.546SS*.Hα-helixtrans-55.2-44.6-176.9-148.881.9000114.5Y4 V5 Y6L2-Y4 VanDerWaalsContact C-N 3.28Å; L2-Y4 PolarHBondContact O-N 3.47Å; L2-V5 PolarHBondContact O-N 3.27Å; L2-Y6 PolarHBondContact O-N 3.41Å
3K83.7Confident81.8Confident158 Ų158120.1 Ų120.169%0.68755%0.554SS**Hα-helixtrans-56.7-40.6176.2-110.4-176.3177.9178.10112.5M1 Y6 Y7M1-K3 PolarHBondContact O-N 2.68Å; K3-Y6 PolarHBondContact O-N 3.06Å; K3-Y7 HydrophobicContact CD-CE2 4.42Å; K3-Y7 HydrophobicContact CG-CE2 4.07Å; K3-Y7 WeakPolarHBondContact O-CD2 3.45Å; K3-Y7 PolarHBondContact O-N 3.13Å
4Y84.1Confident82.1Confident149 Ų149118.4 Ų118.458%0.58456%0.563SS**Hα-helixtrans-66.6-46.3-179.3179.7-98.2000111.3M1 L2 Y6 Y7 K8M1-Y4 WeakPolarHBondContact O-CB 3.49Å; M1-Y4 PolarHBondContact O-N 3.32Å; L2-Y4 VanDerWaalsContact C-N 3.28Å; L2-Y4 PolarHBondContact O-N 3.47Å; Y4-Y6 VanDerWaalsContact C-N 3.31Å; Y4-Y6 PolarHBondContact O-N 3.16Å; Y4-Y7 PolarHBondContact O-N 3.04Å; Y4-K8 HydrophobicContact CD1-CG 4.37Å; Y4-K8 HydrophobicContact CD2-CG 4.23Å; Y4-K8 HydrophobicContact CE1-CG 4.02Å; Y4-K8 HydrophobicContact CE2-CD 4.25Å; Y4-K8 HydrophobicContact CE2-CG 3.86Å; Y4-K8 HydrophobicContact CG-CG 4.47Å; Y4-K8 VanDerWaalsContact O-CB 3.3Å; Y4-K8 WeakPolarHBondContact O-CB 3.45Å; Y4-K8 WeakPolarHBondContact O-CG 3.44Å; Y4-K8 PolarHBondContact O-N 3.48Å; Y4-K8 VanDerWaalsContact OH-CE 3.25Å; Y4-K8 WeakPolarHBondContact OH-CE 3.36Å
5V81.9Confident82.4Confident59 Ų59119.9 Ų119.936%0.35856%0.56SS.*Hα-helixtrans-60.2-43.5176177.10000110.7M1 L2 K8 I9 L10M1-V5 PolarHBondContact O-N 3.34Å; L2-V5 PolarHBondContact O-N 3.27Å; V5-K8 PolarHBondContact O-N 3.36Å; V5-I9 HydrophobicContact CG1-CD1 4.47Å; V5-I9 WeakPolarHBondContact O-CB 3.26Å; V5-I9 PolarHBondContact O-N 3.43Å; V5-L10 HydrophobicContact CG1-CD1 4.46Å; V5-L10 HydrophobicContact CG1-CG 4.43Å; V5-L10 PolarHBondContact O-N 3.37Å
6Y85.2Confident82.8Confident117 Ų117118.7 Ų118.746%0.45955%0.553SS.*Iπ-helixtrans-59.4-53.8177.4-178.9-94.9000111.9L2 K3 Y4 K8 L10 R11L2-Y6 PolarHBondContact O-N 3.41Å; K3-Y6 PolarHBondContact O-N 3.06Å; Y4-Y6 VanDerWaalsContact C-N 3.31Å; Y4-Y6 PolarHBondContact O-N 3.16Å; Y6-K8 PolarHBondContact O-N 3.02Å; Y6-L10 HydrophobicContact CD2-CB 3.84Å; Y6-L10 HydrophobicContact CD2-CD1 4.15Å; Y6-L10 HydrophobicContact CE2-CB 4.38Å; Y6-L10 HydrophobicContact CG-CB 4.48Å; Y6-L10 CarbonylContact O-C 3.56Å; Y6-L10 PolarHBondContact O-N 3.49Å; Y6-L10 VanDerWaalsContact O-N 3.1Å; Y6-R11 HydrophobicContact CE1-CB 4.28Å; Y6-R11 VanDerWaalsContact O-CB 3.31Å; Y6-R11 WeakPolarHBondContact O-CB 3.3Å; Y6-R11 PolarHBondContact O-N 3Å
7Y84.1Confident83.3Confident114 Ų114117.4 Ų117.445%0.44756%0.555SS.*Iπ-helixtrans-68.6-31.1-177-74.1-62.1000113.9K3 Y4K3-Y7 HydrophobicContact CD-CE2 4.42Å; K3-Y7 HydrophobicContact CG-CE2 4.07Å; K3-Y7 WeakPolarHBondContact O-CD2 3.45Å; K3-Y7 PolarHBondContact O-N 3.13Å; Y4-Y7 PolarHBondContact O-N 3.04Å
8K81.8Confident83.8Confident113 Ų113113.2 Ų113.249%0.49155%0.548SS..Iπ-helixtrans-81.3-42.6-178.8-77.6-93.9-179.6167.10112.8Y4 V5 Y6 R15Y4-K8 HydrophobicContact CD1-CG 4.37Å; Y4-K8 HydrophobicContact CD2-CG 4.23Å; Y4-K8 HydrophobicContact CE1-CG 4.02Å; Y4-K8 HydrophobicContact CE2-CD 4.25Å; Y4-K8 HydrophobicContact CE2-CG 3.86Å; Y4-K8 HydrophobicContact CG-CG 4.47Å; Y4-K8 VanDerWaalsContact O-CB 3.3Å; Y4-K8 WeakPolarHBondContact O-CB 3.45Å; Y4-K8 WeakPolarHBondContact O-CG 3.44Å; Y4-K8 PolarHBondContact O-N 3.48Å; Y4-K8 VanDerWaalsContact OH-CE 3.25Å; Y4-K8 WeakPolarHBondContact OH-CE 3.36Å; V5-K8 PolarHBondContact O-N 3.36Å; Y6-K8 PolarHBondContact O-N 3.02Å; K8-R15 WeakPolarHBondContact O-CD 3.49Å
9I80.4Confident84.2Confident65 Ų65109 Ų10933%0.33353%0.534SS..Iπ-helixtrans-115.3-55.9-167.2-58.7174.5000111.1V5 R11 F16 A19V5-I9 HydrophobicContact CG1-CD1 4.47Å; V5-I9 WeakPolarHBondContact O-CB 3.26Å; V5-I9 PolarHBondContact O-N 3.43Å; I9-R11 PolarHBondContact O-N 2.92Å; I9-F16 PolarHBondContact O-N 3.23Å; I9-A19 HydrophobicContact CG2-CB 3.29Å
10L82.1Confident84.6Confident79 Ų79105.6 Ų105.641%0.41452%0.524SS..Iπ-helixtrans-77.8-24-168.5-50.7177.4000113.9V5 Y6 Y12 F16V5-L10 HydrophobicContact CG1-CD1 4.46Å; V5-L10 HydrophobicContact CG1-CG 4.43Å; V5-L10 PolarHBondContact O-N 3.37Å; Y6-L10 HydrophobicContact CD2-CB 3.84Å; Y6-L10 HydrophobicContact CD2-CD1 4.15Å; Y6-L10 HydrophobicContact CE2-CB 4.38Å; Y6-L10 HydrophobicContact CG-CB 4.48Å; Y6-L10 CarbonylContact O-C 3.56Å; Y6-L10 PolarHBondContact O-N 3.49Å; Y6-L10 VanDerWaalsContact O-N 3.1Å; L10-Y12 VanDerWaalsContact C-N 3.32Å; L10-Y12 PolarHBondContact O-N 2.95Å; L10-F16 HydrophobicContact CD2-CD2 3.4Å; L10-F16 VanDerWaalsContact CD2-CD2 3.4Å; L10-F16 HydrophobicContact CD2-CE2 3.63Å
11R83.3Confident85.1Confident134 Ų134102.7 Ų102.751%0.50652%0.516SS..THydrogen-bonded Turntrans-68.2-29.5-175178.5167.9-178.7165.15.2113.4Y6 I9Y6-R11 HydrophobicContact CE1-CB 4.28Å; Y6-R11 VanDerWaalsContact O-CB 3.31Å; Y6-R11 WeakPolarHBondContact O-CB 3.3Å; Y6-R11 PolarHBondContact O-N 3Å; I9-R11 PolarHBondContact O-N 2.92Å
12Y84.3Confident86.3Confident109 Ų10995.8 Ų95.843%0.42749%0.492SS..SBendtrans-110.6116.2-177.5-63.8-78.8000109.3L10 S14 R15 F16L10-Y12 VanDerWaalsContact C-N 3.32Å; L10-Y12 PolarHBondContact O-N 2.95Å; Y12-S14 VanDerWaalsContact C-N 3.26Å; Y12-S14 PolarHBondContact O-N 2.87Å; Y12-S14 VanDerWaalsContact O-N 3.14Å; Y12-R15 PolarHBondContact O-N 3.45Å; Y12-F16 PolarHBondContact O-N 3.16Å
13P85.4Confident87Confident100 Ų10091.6 Ų91.665%0.64948%0.476SS*.Hα-helixtrans-53-39.2-174.8-29.234.7000114.1R15 F16 V17P13-R15 PolarHBondContact O-N 3.46Å; P13-F16 WeakPolarHBondContact O-CB 3.19Å; P13-F16 PolarHBondContact O-N 3.26Å; P13-V17 WeakPolarHBondContact O-CG2 3.47Å; P13-V17 PolarHBondContact O-N 2.83Å
14S86.1Confident87.6Confident97 Ų9786.6 Ų86.668%0.67847%0.465SS*.Hα-helixtrans-63-42177.154.20000113.2Y12 G18Y12-S14 VanDerWaalsContact C-N 3.26Å; Y12-S14 PolarHBondContact O-N 2.87Å; Y12-S14 VanDerWaalsContact O-N 3.14Å; S14-G18 PolarHBondContact O-N 3.3Å; S14-G18 VanDerWaalsContact O-N 3.12Å
15R86.3Confident88.1Confident140 Ų14086.8 Ų86.853%0.52847%0.469SS..Hα-helixtrans-70.9-36.5176.3-64.6-174.6-177.8165.12.9111.6K8 Y12 P13 G18 A19K8-R15 WeakPolarHBondContact O-CD 3.49Å; Y12-R15 PolarHBondContact O-N 3.45Å; P13-R15 PolarHBondContact O-N 3.46Å; R15-G18 PolarHBondContact O-N 2.95Å; R15-A19 WeakPolarHBondContact O-CB 3.46Å; R15-A19 PolarHBondContact O-N 3.43Å
16F88.4Confident88.8Confident101 Ų10186.6 Ų86.644%0.44347%0.473SS..Hα-helixtrans-61-50174.9175.5-110.4000111.2I9 L10 Y12 P13 G18 A19 A20I9-F16 PolarHBondContact O-N 3.23Å; L10-F16 HydrophobicContact CD2-CD2 3.4Å; L10-F16 VanDerWaalsContact CD2-CD2 3.4Å; L10-F16 HydrophobicContact CD2-CE2 3.63Å; Y12-F16 PolarHBondContact O-N 3.16Å; P13-F16 WeakPolarHBondContact O-CB 3.19Å; P13-F16 PolarHBondContact O-N 3.26Å; F16-G18 VanDerWaalsContact C-N 3.34Å; F16-G18 PolarHBondContact O-N 3.44Å; F16-A19 PolarHBondContact O-N 3.24Å; F16-A20 WeakPolarHBondContact O-CB 3.5Å; F16-A20 PolarHBondContact O-N 2.99Å
17V91.1Very high89.3Confident96 Ų9687.2 Ų87.258%0.58248%0.478SS*.Hα-helixtrans-59.5-44.9177.8171.80000111P13 A19 A20 A21P13-V17 WeakPolarHBondContact O-CG2 3.47Å; P13-V17 PolarHBondContact O-N 2.83Å; V17-A19 PolarHBondContact O-N 3.41Å; V17-A20 PolarHBondContact O-N 2.84Å; V17-A21 WeakPolarHBondContact O-CB 3.41Å; V17-A21 PolarHBondContact O-N 3.04Å
18G92Very high89.8Confident42 Ų4286.5 Ų86.543%0.43348%0.479SS..Hα-helixtrans-61.1-43.2176.200000113.2S14 R15 F16 A21 A22S14-G18 PolarHBondContact O-N 3.3Å; S14-G18 VanDerWaalsContact O-N 3.12Å; R15-G18 PolarHBondContact O-N 2.95Å; F16-G18 VanDerWaalsContact C-N 3.34Å; F16-G18 PolarHBondContact O-N 3.44Å; G18-A21 PolarHBondContact O-N 2.98Å; G18-A22 WeakPolarHBondContact O-CB 3.43Å; G18-A22 PolarHBondContact O-N 3.03Å
19A91.4Very high90.4Very high34 Ų3488 Ų8828%0.28149%0.486SS..Hα-helixtrans-68.9-37.217700000112.7I9 R15 F16 V17 S23I9-A19 HydrophobicContact CG2-CB 3.29Å; R15-A19 WeakPolarHBondContact O-CB 3.46Å; R15-A19 PolarHBondContact O-N 3.43Å; F16-A19 PolarHBondContact O-N 3.24Å; V17-A19 PolarHBondContact O-N 3.41Å; A19-S23 VanDerWaalsContact O-CB 3.29Å; A19-S23 WeakPolarHBondContact O-CB 3.18Å; A19-S23 PolarHBondContact O-N 3.19Å; A19-S23 PolarHBondContact O-OG 3.42Å
20A92.2Very high91.1Very high40 Ų4090.7 Ų90.733%0.33150%0.5SS..Hα-helixtrans-63.3-45.8174.700000110.9F16 V17 S23 A24F16-A20 WeakPolarHBondContact O-CB 3.5Å; F16-A20 PolarHBondContact O-N 2.99Å; V17-A20 PolarHBondContact O-N 2.84Å; A20-S23 WeakPolarHBondContact CA-OG 3.26Å; A20-S23 PolarHBondContact O-N 3.39Å; A20-S23 PolarHBondContact O-OG 2.78Å; A20-A24 WeakPolarHBondContact O-CB 3.28Å; A20-A24 PolarHBondContact O-N 3.08Å
21A94.9Very high91.7Very high45 Ų4591.8 Ų91.837%0.37250%0.502SS..Hα-helixtrans-62.3-49.1175.800000111.8V17 G18 S23 A24 F25V17-A21 WeakPolarHBondContact O-CB 3.41Å; V17-A21 PolarHBondContact O-N 3.04Å; G18-A21 PolarHBondContact O-N 2.98Å; A21-S23 VanDerWaalsContact C-N 3.34Å; A21-S23 PolarHBondContact O-N 3.03Å; A21-A24 WeakPolarHBondContact O-CB 3.3Å; A21-A24 PolarHBondContact O-N 3.31Å; A21-F25 WeakPolarHBondContact O-CD2 3.44Å; A21-F25 PolarHBondContact O-N 3.45Å
22A94.2Very high92.2Very high62 Ų6290.7 Ų90.751%0.51250%0.501SS..Hα-helixtrans-61.4-41.4179.300000112.5G18 A26G18-A22 WeakPolarHBondContact O-CB 3.43Å; G18-A22 PolarHBondContact O-N 3.03Å; A22-A26 WeakPolarHBondContact O-CB 3.26Å; A22-A26 PolarHBondContact O-N 2.97Å
23S93.8Very high92.7Very high69 Ų6988.9 Ų88.948%0.48350%0.499SS..Hα-helixtrans-69-35176.555.80000112.5A19 A20 A21 A26 F27A19-S23 VanDerWaalsContact O-CB 3.29Å; A19-S23 WeakPolarHBondContact O-CB 3.18Å; A19-S23 PolarHBondContact O-N 3.19Å; A19-S23 PolarHBondContact O-OG 3.42Å; A20-S23 WeakPolarHBondContact CA-OG 3.26Å; A20-S23 PolarHBondContact O-N 3.39Å; A20-S23 PolarHBondContact O-OG 2.78Å; A21-S23 VanDerWaalsContact C-N 3.34Å; A21-S23 PolarHBondContact O-N 3.03Å; S23-A26 PolarHBondContact O-N 3.45Å; S23-F27 WeakPolarHBondContact O-CB 3.31Å; S23-F27 PolarHBondContact O-N 2.84Å
24A96.1Very high93.1Very high54 Ų5485.5 Ų85.545%0.44648%0.482SS..Hα-helixtrans-61.7-48.4173.900000111.5A20 A21 A26 F27 E28A20-A24 WeakPolarHBondContact O-CB 3.28Å; A20-A24 PolarHBondContact O-N 3.08Å; A21-A24 WeakPolarHBondContact O-CB 3.3Å; A21-A24 PolarHBondContact O-N 3.31Å; A24-A26 PolarHBondContact O-N 3.31Å; A24-F27 PolarHBondContact O-N 3.31Å; A24-E28 WeakPolarHBondContact O-CB 2.95Å; A24-E28 PolarHBondContact O-N 2.83Å
25F95.6Very high93.5Very high153 Ų15384.5 Ų84.567%0.67147%0.469SS*.Hα-helixtrans-61.1-44.2176.6-79.5-68.6000112.6A21 F27 F29A21-F25 WeakPolarHBondContact O-CD2 3.44Å; A21-F25 PolarHBondContact O-N 3.45Å; F25-F27 VanDerWaalsContact C-N 3.35Å; F25-F29 PolarHBondContact O-N 2.83Å; F25-F29 VanDerWaalsContact O-N 3.12Å
26A95.9Very high93.8Very high54 Ų5481.6 Ų81.645%0.44646%0.464SS..Hα-helixtrans-64.7-41.1177.700000111.7A22 S23 A24 L30A22-A26 WeakPolarHBondContact O-CB 3.26Å; A22-A26 PolarHBondContact O-N 2.97Å; S23-A26 PolarHBondContact O-N 3.45Å; A24-A26 PolarHBondContact O-N 3.31Å; A26-L30 WeakPolarHBondContact O-CB 3.17Å; A26-L30 WeakPolarHBondContact O-CG 3.41Å; A26-L30 PolarHBondContact O-N 2.79Å; A26-L30 VanDerWaalsContact O-N 3.08Å
27F95.6Very high94.1Very high130 Ų13084.2 Ų84.257%0.5748%0.475SS*.Hα-helixtrans-64.9-47.3177.8-179.1-94.4000111.2S23 A24 F25 F29 L30 F31S23-F27 WeakPolarHBondContact O-CB 3.31Å; S23-F27 PolarHBondContact O-N 2.84Å; A24-F27 PolarHBondContact O-N 3.31Å; F25-F27 VanDerWaalsContact C-N 3.35Å; F27-F29 VanDerWaalsContact C-N 3.33Å; F27-F29 PolarHBondContact O-N 2.9Å; F27-L30 PolarHBondContact O-N 3.29Å; F27-F31 HydrophobicContact CD1-CB 4.26Å; F27-F31 HydrophobicContact CE1-CB 3.92Å; F27-F31 HydrophobicContact CE1-CD1 4.46Å; F27-F31 HydrophobicContact CE1-CD2 4.09Å; F27-F31 AromaticContact CE1-CG 3.92Å; F27-F31 HydrophobicContact CE1-CG 3.92Å; F27-F31 HydrophobicContact CE2-CD2 4.26Å; F27-F31 HydrophobicContact CZ-CB 4.13Å; F27-F31 AromaticContact CZ-CD2 3.61Å; F27-F31 HydrophobicContact CZ-CD2 3.61Å; F27-F31 HydrophobicContact CZ-CE2 4.18Å; F27-F31 AromaticContact CZ-CG 3.93Å; F27-F31 HydrophobicContact CZ-CG 3.93Å; F27-F31 WeakPolarHBondContact O-CB 3.33Å; F27-F31 PolarHBondContact O-N 3.15Å
28E94.7Very high94.2Very high100 Ų10084.8 Ų84.847%0.46747%0.473SS..Hα-helixtrans-55.5-48.9178.4-172175.6-177.200111.2A24 L30 F31 F32A24-E28 WeakPolarHBondContact O-CB 2.95Å; A24-E28 PolarHBondContact O-N 2.83Å; E28-L30 PolarHBondContact O-N 3.06Å; E28-F31 PolarHBondContact O-N 3.39Å; E28-F32 HydrophobicContact CG-CD2 3.53Å; E28-F32 HydrophobicContact CG-CE2 3.35Å; E28-F32 WeakPolarHBondContact O-CB 3.43Å; E28-F32 VanDerWaalsContact O-CD2 3.25Å; E28-F32 WeakPolarHBondContact O-CD2 3.32Å; E28-F32 PolarHBondContact O-N 2.77Å
29F94.4Very high94.2Very high144 Ų14489 Ų8963%0.63248%0.477SS*.Hα-helixtrans-60.6-46.7177.7-176.6-97.2000112.5F25 F27 N33F25-F29 PolarHBondContact O-N 2.83Å; F25-F29 VanDerWaalsContact O-N 3.12Å; F27-F29 VanDerWaalsContact C-N 3.33Å; F27-F29 PolarHBondContact O-N 2.9Å; F29-N33 WeakPolarHBondContact CE1-ND2 3.5Å; F29-N33 WeakPolarHBondContact CE2-ND2 3.34Å; F29-N33 VanDerWaalsContact CZ-ND2 3.28Å; F29-N33 WeakPolarHBondContact CZ-ND2 3.48Å; F29-N33 WeakPolarHBondContact O-CB 3.34Å; F29-N33 PolarHBondContact O-N 2.98Å; F29-N33 PolarHBondContact O-ND2 3.27Å
30L95.5Very high94.2Very high122 Ų12291.2 Ų91.264%0.63948%0.481SS*.Hα-helixtrans-69.2-40.2-179.1-72.3172.5000112.1A26 F27 E28 G34A26-L30 WeakPolarHBondContact O-CB 3.17Å; A26-L30 WeakPolarHBondContact O-CG 3.41Å; A26-L30 PolarHBondContact O-N 2.79Å; A26-L30 VanDerWaalsContact O-N 3.08Å; F27-L30 PolarHBondContact O-N 3.29Å; E28-L30 PolarHBondContact O-N 3.06Å; L30-G34 PolarHBondContact O-N 3.25Å
31F94.6Very high94.2Very high102 Ų10296.4 Ų96.445%0.44750%0.498SS..Hα-helixtrans-70.2-46.9-175.7-166.1-103.3000111.1F27 E28 G34 L35F27-F31 HydrophobicContact CD1-CB 4.26Å; F27-F31 HydrophobicContact CE1-CB 3.92Å; F27-F31 HydrophobicContact CE1-CD1 4.46Å; F27-F31 HydrophobicContact CE1-CD2 4.09Å; F27-F31 AromaticContact CE1-CG 3.92Å; F27-F31 HydrophobicContact CE1-CG 3.92Å; F27-F31 HydrophobicContact CE2-CD2 4.26Å; F27-F31 HydrophobicContact CZ-CB 4.13Å; F27-F31 AromaticContact CZ-CD2 3.61Å; F27-F31 HydrophobicContact CZ-CD2 3.61Å; F27-F31 HydrophobicContact CZ-CE2 4.18Å; F27-F31 AromaticContact CZ-CG 3.93Å; F27-F31 HydrophobicContact CZ-CG 3.93Å; F27-F31 WeakPolarHBondContact O-CB 3.33Å; F27-F31 PolarHBondContact O-N 3.15Å; E28-F31 PolarHBondContact O-N 3.39Å; F31-G34 PolarHBondContact O-N 3.23Å; F31-L35 HydrophobicContact CD1-CD1 3.66Å; F31-L35 HydrophobicContact CD1-CG 4.1Å; F31-L35 HydrophobicContact CE1-CD1 3.2Å; F31-L35 HydrophobicContact CE1-CD2 4.5Å; F31-L35 HydrophobicContact CE1-CG 3.87Å; F31-L35 HydrophobicContact CZ-CD1 3.78Å; F31-L35 HydrophobicContact CZ-CD2 4.29Å; F31-L35 HydrophobicContact CZ-CG 4.11Å; F31-L35 WeakPolarHBondContact O-CB 3.14Å; F31-L35 WeakPolarHBondContact O-CG 3.41Å; F31-L35 PolarHBondContact O-N 3.22Å
32F93.8Very high94.1Very high110 Ų11099.3 Ų99.348%0.48251%0.511SS..Hα-helixtrans-63.2-46.4176-75.8-53.1000112.2E28 G34 L35 D36E28-F32 HydrophobicContact CG-CD2 3.53Å; E28-F32 HydrophobicContact CG-CE2 3.35Å; E28-F32 WeakPolarHBondContact O-CB 3.43Å; E28-F32 VanDerWaalsContact O-CD2 3.25Å; E28-F32 WeakPolarHBondContact O-CD2 3.32Å; E28-F32 PolarHBondContact O-N 2.77Å; F32-G34 VanDerWaalsContact C-N 3.26Å; F32-G34 PolarHBondContact O-N 3.42Å; F32-L35 PolarHBondContact O-N 3.46Å; F32-D36 WeakPolarHBondContact O-CB 3.38Å; F32-D36 PolarHBondContact O-N 2.95Å
33N94.2Very high93.9Very high71 Ų7198.3 Ų98.338%0.3850%0.497SS..Hα-helixtrans-60.6-36.9175.9-82.2-64.7000112.5F29 K37F29-N33 WeakPolarHBondContact CE1-ND2 3.5Å; F29-N33 WeakPolarHBondContact CE2-ND2 3.34Å; F29-N33 VanDerWaalsContact CZ-ND2 3.28Å; F29-N33 WeakPolarHBondContact CZ-ND2 3.48Å; F29-N33 WeakPolarHBondContact O-CB 3.34Å; F29-N33 PolarHBondContact O-N 2.98Å; F29-N33 PolarHBondContact O-ND2 3.27Å; N33-K37 WeakPolarHBondContact O-CB 3.09Å; N33-K37 WeakPolarHBondContact O-CG 3.17Å; N33-K37 PolarHBondContact O-N 3.29Å; N33-K37 VanDerWaalsContact O-N 3.15Å
34G94.4Very high93.6Very high29 Ų29102.6 Ų102.630%0.29951%0.507SS..Hα-helixtrans-67.1-50.1176.800000112.1L30 F31 F32 K37 I38L30-G34 PolarHBondContact O-N 3.25Å; F31-G34 PolarHBondContact O-N 3.23Å; F32-G34 VanDerWaalsContact C-N 3.26Å; F32-G34 PolarHBondContact O-N 3.42Å; G34-K37 PolarHBondContact O-N 3.08Å; G34-I38 WeakPolarHBondContact O-CG1 3.25Å; G34-I38 PolarHBondContact O-N 3.43Å
35L94.9Very high92.9Very high77 Ų77102.2 Ų102.240%0.40351%0.508SS..Hα-helixtrans-62.9-43.3178.5-74.8-172.2000112F31 F32 K37 I38 Y39F31-L35 HydrophobicContact CD1-CD1 3.66Å; F31-L35 HydrophobicContact CD1-CG 4.1Å; F31-L35 HydrophobicContact CE1-CD1 3.2Å; F31-L35 HydrophobicContact CE1-CD2 4.5Å; F31-L35 HydrophobicContact CE1-CG 3.87Å; F31-L35 HydrophobicContact CZ-CD1 3.78Å; F31-L35 HydrophobicContact CZ-CD2 4.29Å; F31-L35 HydrophobicContact CZ-CG 4.11Å; F31-L35 WeakPolarHBondContact O-CB 3.14Å; F31-L35 WeakPolarHBondContact O-CG 3.41Å; F31-L35 PolarHBondContact O-N 3.22Å; F32-L35 PolarHBondContact O-N 3.46Å; L35-K37 VanDerWaalsContact C-N 3.32Å; L35-K37 PolarHBondContact O-N 2.78Å; L35-I38 PolarHBondContact O-N 3.42Å; L35-Y39 VanDerWaalsContact O-CB 3.3Å; L35-Y39 WeakPolarHBondContact O-CB 3.28Å; L35-Y39 PolarHBondContact O-N 3.32Å
36D93.3Very high92.5Very high78 Ų78101.6 Ų101.642%0.41751%0.511SS..Hα-helixtrans-60.5-43.4176.7-79.8-11.4000111F32 I38 Y39 F40F32-D36 WeakPolarHBondContact O-CB 3.38Å; F32-D36 PolarHBondContact O-N 2.95Å; D36-I38 PolarHBondContact O-N 2.97Å; D36-Y39 PolarHBondContact O-N 3.02Å; D36-F40 HydrophobicContact CB-CD2 4.16Å; D36-F40 HydrophobicContact CB-CE2 3.92Å; D36-F40 VanDerWaalsContact O-CB 3.31Å; D36-F40 WeakPolarHBondContact O-CB 3.4Å; D36-F40 WeakPolarHBondContact O-CD2 3.43Å; D36-F40 VanDerWaalsContact O-CG 3.26Å; D36-F40 WeakPolarHBondContact O-CG 3.3Å; D36-F40 PolarHBondContact O-N 2.82Å
37K92.9Very high92Very high157 Ų157100 Ų10068%0.68350%0.495SS*.Hα-helixtrans-60.3-44.8175.3-81.3179.8-179.5-179.60112.1N33 G34 L35 H41N33-K37 WeakPolarHBondContact O-CB 3.09Å; N33-K37 WeakPolarHBondContact O-CG 3.17Å; N33-K37 PolarHBondContact O-N 3.29Å; N33-K37 VanDerWaalsContact O-N 3.15Å; G34-K37 PolarHBondContact O-N 3.08Å; L35-K37 VanDerWaalsContact C-N 3.32Å; L35-K37 PolarHBondContact O-N 2.78Å; K37-H41 VanDerWaalsContact O-CB 3.26Å; K37-H41 WeakPolarHBondContact O-CB 3.29Å; K37-H41 PolarHBondContact O-N 3.31Å
38I94.1Very high91.5Very high107 Ų107101.1 Ų101.155%0.54950%0.5SS..Hα-helixtrans-62.8-48.4177.2-66.7166.5000109.5G34 L35 D36 F40 H41 V42G34-I38 WeakPolarHBondContact O-CG1 3.25Å; G34-I38 PolarHBondContact O-N 3.43Å; L35-I38 PolarHBondContact O-N 3.42Å; D36-I38 PolarHBondContact O-N 2.97Å; I38-F40 PolarHBondContact O-N 3.39Å; I38-H41 PolarHBondContact O-N 3.07Å; I38-H41 VanDerWaalsContact O-N 3.16Å; I38-V42 HydrophobicContact CG2-CG2 4.23Å; I38-V42 WeakPolarHBondContact O-CB 3.46Å; I38-V42 VanDerWaalsContact O-CG2 3.3Å; I38-V42 WeakPolarHBondContact O-CG2 3.32Å; I38-V42 PolarHBondContact O-N 3.27Å
39Y92.5Very high91.2Very high130 Ų130101.2 Ų101.251%0.5150%0.499SS..Hα-helixtrans-59.4-46.3179.8177.4-99.7000112.1L35 D36 H41 V42 N43 L47L35-Y39 VanDerWaalsContact O-CB 3.3Å; L35-Y39 WeakPolarHBondContact O-CB 3.28Å; L35-Y39 PolarHBondContact O-N 3.32Å; D36-Y39 PolarHBondContact O-N 3.02Å; Y39-H41 VanDerWaalsContact C-N 3.31Å; Y39-H41 PolarHBondContact O-N 2.85Å; Y39-V42 PolarHBondContact O-N 3.46Å; Y39-N43 VanDerWaalsContact CD2-ND2 3.26Å; Y39-N43 WeakPolarHBondContact CD2-ND2 3.44Å; Y39-N43 WeakPolarHBondContact CE2-ND2 3.43Å; Y39-N43 WeakPolarHBondContact O-CB 3.25Å; Y39-N43 PolarHBondContact O-N 3.12Å; Y39-N43 PolarHBondContact O-ND2 2.79Å; Y39-L47 HydrophobicContact CD1-CD2 4.36Å; Y39-L47 HydrophobicContact CE1-CD2 3.71Å
40F91.5Very high90.7Very high82 Ų8296.5 Ų96.536%0.3648%0.48SS..Hα-helixtrans-66.2-33.5177-72-49000112.7D36 I38 K44 L47 K49D36-F40 HydrophobicContact CB-CD2 4.16Å; D36-F40 HydrophobicContact CB-CE2 3.92Å; D36-F40 VanDerWaalsContact O-CB 3.31Å; D36-F40 WeakPolarHBondContact O-CB 3.4Å; D36-F40 WeakPolarHBondContact O-CD2 3.43Å; D36-F40 VanDerWaalsContact O-CG 3.26Å; D36-F40 WeakPolarHBondContact O-CG 3.3Å; D36-F40 PolarHBondContact O-N 2.82Å; I38-F40 PolarHBondContact O-N 3.39Å; F40-K44 PolarHBondContact O-N 3.45Å; F40-L47 HydrophobicContact CB-CD1 4.46Å; F40-L47 HydrophobicContact CD1-CD1 3.83Å; F40-L47 HydrophobicContact CD1-CD2 3.59Å; F40-L47 HydrophobicContact CD1-CG 4.34Å; F40-L47 HydrophobicContact CE1-CD2 3.78Å; F40-K49 VanDerWaalsContact CG-NZ 3.28Å
41H91.5Very high90.2Very high148 Ų14893.4 Ų93.469%0.68547%0.466SS*.Hα-helixtrans-72.1-44177.2-16978.7000111.7K37 I38 Y39 K44K37-H41 VanDerWaalsContact O-CB 3.26Å; K37-H41 WeakPolarHBondContact O-CB 3.29Å; K37-H41 PolarHBondContact O-N 3.31Å; I38-H41 PolarHBondContact O-N 3.07Å; I38-H41 VanDerWaalsContact O-N 3.16Å; Y39-H41 VanDerWaalsContact C-N 3.31Å; Y39-H41 PolarHBondContact O-N 2.85Å; H41-K44 WeakPolarHBondContact O-CB 3.34Å
42V92.9Very high89.8Confident106 Ų10693.7 Ų93.764%0.64247%0.47SS*.Hα-helixtrans-67.2-39.8179.9171.80000111.5I38 Y39I38-V42 HydrophobicContact CG2-CG2 4.23Å; I38-V42 WeakPolarHBondContact O-CB 3.46Å; I38-V42 VanDerWaalsContact O-CG2 3.3Å; I38-V42 WeakPolarHBondContact O-CG2 3.32Å; I38-V42 PolarHBondContact O-N 3.27Å; Y39-V42 PolarHBondContact O-N 3.46Å
43N90.9Very high89.5Confident42 Ų4291 Ų9123%0.22547%0.468CS..THydrogen-bonded Turntrans-96.216.8-177.4-63.4-74.9000113.7Y39 G45 L46 L47Y39-N43 VanDerWaalsContact CD2-ND2 3.26Å; Y39-N43 WeakPolarHBondContact CD2-ND2 3.44Å; Y39-N43 WeakPolarHBondContact CE2-ND2 3.43Å; Y39-N43 WeakPolarHBondContact O-CB 3.25Å; Y39-N43 PolarHBondContact O-N 3.12Å; Y39-N43 PolarHBondContact O-ND2 2.79Å; N43-G45 PolarHBondContact O-N 3.1Å; N43-L46 PolarHBondContact O-N 3.4Å; N43-L47 HydrophobicContact CB-CD1 3.9Å; N43-L47 HydrophobicContact CB-CG 4Å; N43-L47 WeakPolarHBondContact O-CD1 3.31Å; N43-L47 PolarHBondContact O-N 3.5Å
44K86.4Confident88.9Confident159 Ų15990.2 Ų90.269%0.69147%0.469SS*.THydrogen-bonded Turntrans-56126.2-179.5-168.6179.6179.8-174.60110.2F40 H41 D50F40-K44 PolarHBondContact O-N 3.45Å; H41-K44 WeakPolarHBondContact O-CB 3.34Å; K44-D50 WeakPolarHBondContact CA-OD2 3.34Å
45G81.9Confident88.4Confident46 Ų4693 Ų9347%0.47448%0.475SS..THydrogen-bonded Turntrans91.6-15.5-176.600000115.2N43 D50N43-G45 PolarHBondContact O-N 3.1Å; G45-D50 PolarHBondContact N-OD2 3.34Å
46L85.9Confident88Confident139 Ų13995.3 Ų95.373%0.72848%0.482SS*.THydrogen-bonded Turntrans-99.8-18.9172.6-59.9176.7000112.1N43N43-L46 PolarHBondContact O-N 3.4Å
47L86.3Confident87.5Confident20 Ų2097.8 Ų97.811%0.10549%0.491CS..SBendtrans-69.7140.8179.5-68.6136000110.4Y39 F40 N43 K49 D50 V51Y39-L47 HydrophobicContact CD1-CD2 4.36Å; Y39-L47 HydrophobicContact CE1-CD2 3.71Å; F40-L47 HydrophobicContact CB-CD1 4.46Å; F40-L47 HydrophobicContact CD1-CD1 3.83Å; F40-L47 HydrophobicContact CD1-CD2 3.59Å; F40-L47 HydrophobicContact CD1-CG 4.34Å; F40-L47 HydrophobicContact CE1-CD2 3.78Å; N43-L47 HydrophobicContact CB-CD1 3.9Å; N43-L47 HydrophobicContact CB-CG 4Å; N43-L47 WeakPolarHBondContact O-CD1 3.31Å; N43-L47 PolarHBondContact O-N 3.5Å; L47-K49 HydrophobicContact CB-CG 3.97Å; L47-K49 PolarHBondContact O-N 3.28Å; L47-K49 VanDerWaalsContact O-N 3.08Å; L47-D50 WeakPolarHBondContact O-CA 3.41Å; L47-D50 PolarHBondContact O-N 2.91Å; L47-V51 PolarHBondContact O-N 2.75Å
48F86.3Confident86.8Confident154 Ų15497.5 Ų97.568%0.67549%0.49SS*.Hα-helixtrans-50.6-39.1178.6-175.3-101.1000112.9D50 V51 M52F48-D50 VanDerWaalsContact C-N 3.31Å; F48-D50 PolarHBondContact O-N 2.8Å; F48-V51 PolarHBondContact O-N 2.9Å; F48-M52 HydrophobicContact CD1-SD 4.37Å; F48-M52 HydrophobicContact CE1-CE 3.68Å; F48-M52 HydrophobicContact CE1-SD 3.51Å; F48-M52 VanDerWaalsContact CE1-SD 3.51Å; F48-M52 HydrophobicContact CE2-CE 4.37Å; F48-M52 HydrophobicContact CZ-CE 3.37Å; F48-M52 HydrophobicContact CZ-SD 3.87Å; F48-M52 WeakPolarHBondContact O-CB 3.5Å; F48-M52 PolarHBondContact O-N 3.49Å
49K88.1Confident86.1Confident102 Ų10298.8 Ų98.844%0.44349%0.494SS..Hα-helixtrans-60.7-37.2176.167-178-176.6-1790113.4F40 L47 A53F40-K49 VanDerWaalsContact CG-NZ 3.28Å; L47-K49 HydrophobicContact CB-CG 3.97Å; L47-K49 PolarHBondContact O-N 3.28Å; L47-K49 VanDerWaalsContact O-N 3.08Å; K49-A53 VanDerWaalsContact O-CB 3.28Å; K49-A53 WeakPolarHBondContact O-CB 3.37Å; K49-A53 PolarHBondContact O-N 3.46Å
50D83.8Confident85.3Confident45 Ų4599.2 Ų99.224%0.24150%0.501CS..Hα-helixtrans-79.3-40.5-178-61.1-26.7000109.8K44 G45 L47 F48 A53 S54K44-D50 WeakPolarHBondContact CA-OD2 3.34Å; G45-D50 PolarHBondContact N-OD2 3.34Å; L47-D50 WeakPolarHBondContact O-CA 3.41Å; L47-D50 PolarHBondContact O-N 2.91Å; F48-D50 VanDerWaalsContact C-N 3.31Å; F48-D50 PolarHBondContact O-N 2.8Å; D50-A53 PolarHBondContact O-N 3.33Å; D50-S54 PolarHBondContact O-N 2.98Å
51V84.6Confident84.3Confident58 Ų58103.3 Ų103.335%0.35252%0.521SS..Hα-helixtrans-61.8-48.2174.2177.10000110.4L47 F48 A53 S54 I55L47-V51 PolarHBondContact O-N 2.75Å; F48-V51 PolarHBondContact O-N 2.9Å; V51-A53 VanDerWaalsContact C-N 3.34Å; V51-A53 PolarHBondContact O-N 2.91Å; V51-S54 PolarHBondContact O-N 3.48Å; V51-S54 VanDerWaalsContact O-N 3.13Å; V51-S54 PolarHBondContact O-OG 3.21Å; V51-I55 HydrophobicContact CG1-CD1 3.93Å; V51-I55 WeakPolarHBondContact O-CG1 3.49Å; V51-I55 PolarHBondContact O-N 3.4Å
52M85.5Confident82.6Confident107 Ų107107.3 Ų107.353%0.52754%0.54SS..Hα-helixtrans-65.6-36.9179.6-168165.7-108.800112.1F48 S54 I55 K56F48-M52 HydrophobicContact CD1-SD 4.37Å; F48-M52 HydrophobicContact CE1-CE 3.68Å; F48-M52 HydrophobicContact CE1-SD 3.51Å; F48-M52 VanDerWaalsContact CE1-SD 3.51Å; F48-M52 HydrophobicContact CE2-CE 4.37Å; F48-M52 HydrophobicContact CZ-CE 3.37Å; F48-M52 HydrophobicContact CZ-SD 3.87Å; F48-M52 WeakPolarHBondContact O-CB 3.5Å; F48-M52 PolarHBondContact O-N 3.49Å; M52-S54 VanDerWaalsContact C-N 3.34Å; M52-I55 PolarHBondContact O-N 2.88Å; M52-K56 WeakPolarHBondContact O-CB 3.34Å; M52-K56 PolarHBondContact O-N 3.41Å
53A87Confident82Confident54 Ų54107.4 Ų107.445%0.44653%0.534SS..Hα-helixtrans-61.3-42.5171.300000111.9K49 D50 V51 K56 Q57K49-A53 VanDerWaalsContact O-CB 3.28Å; K49-A53 WeakPolarHBondContact O-CB 3.37Å; K49-A53 PolarHBondContact O-N 3.46Å; D50-A53 PolarHBondContact O-N 3.33Å; V51-A53 VanDerWaalsContact C-N 3.34Å; V51-A53 PolarHBondContact O-N 2.91Å; A53-K56 PolarHBondContact O-N 3.47Å; A53-Q57 PolarHBondContact O-N 2.96Å
54S82.1Confident81.6Confident55 Ų55110.8 Ų110.839%0.38555%0.551SS.*Hα-helixtrans-69-34.8177.871.80000113.8D50 V51 M52 K58D50-S54 PolarHBondContact O-N 2.98Å; V51-S54 PolarHBondContact O-N 3.48Å; V51-S54 VanDerWaalsContact O-N 3.13Å; V51-S54 PolarHBondContact O-OG 3.21Å; M52-S54 VanDerWaalsContact C-N 3.34Å; S54-K58 WeakPolarHBondContact O-CG 3.32Å; S54-K58 PolarHBondContact O-N 3.42Å; S54-K58 VanDerWaalsContact O-N 3.16Å
55I84.4Confident81.3Confident86 Ų86108.1 Ų108.144%0.44154%0.543SS..Hα-helixtrans-66.3-47.2174.7-68.7168.3000109.8V51 M52 Q57 K58 E59V51-I55 HydrophobicContact CG1-CD1 3.93Å; V51-I55 WeakPolarHBondContact O-CG1 3.49Å; V51-I55 PolarHBondContact O-N 3.4Å; M52-I55 PolarHBondContact O-N 2.88Å; I55-Q57 VanDerWaalsContact C-N 3.3Å; I55-Q57 PolarHBondContact O-N 3.07Å; I55-K58 WeakPolarHBondContact O-CB 3.2Å; I55-K58 PolarHBondContact O-N 3.22Å; I55-E59 PolarHBondContact O-N 2.92Å
56K87Confident81.3Confident127 Ų127111.8 Ų111.855%0.55255%0.547SS*.Hα-helixtrans-61.8-38.5179.5-170.4177.8177.8-174.30112.3M52 A53 K58 E59 E60M52-K56 WeakPolarHBondContact O-CB 3.34Å; M52-K56 PolarHBondContact O-N 3.41Å; A53-K56 PolarHBondContact O-N 3.47Å; K56-K58 VanDerWaalsContact C-N 3.33Å; K56-K58 PolarHBondContact O-N 3.32Å; K56-E59 PolarHBondContact O-N 3.14Å; K56-E60 WeakPolarHBondContact CE-OE1 3.46Å; K56-E60 PolarHBondContact O-N 2.93Å
57Q82Confident81Confident130 Ų130110.1 Ų110.161%0.60754%0.536SS*.Hα-helixtrans-62.4-39.3173.2-81.9-176.3-29.300112.5A53 I55 E60 E61A53-Q57 PolarHBondContact O-N 2.96Å; I55-Q57 VanDerWaalsContact C-N 3.3Å; I55-Q57 PolarHBondContact O-N 3.07Å; Q57-E60 PolarHBondContact O-N 2.99Å; Q57-E61 PolarHBondContact O-N 2.92Å
58K79.4Confident80.6Confident151 Ų151116.1 Ų116.166%0.65756%0.564SS**Hα-helixtrans-66-38.5176.3-76.4-176.7174.7-1710112.9S54 I55 K56 E60 E61 E62S54-K58 WeakPolarHBondContact O-CG 3.32Å; S54-K58 PolarHBondContact O-N 3.42Å; S54-K58 VanDerWaalsContact O-N 3.16Å; I55-K58 WeakPolarHBondContact O-CB 3.2Å; I55-K58 PolarHBondContact O-N 3.22Å; K56-K58 VanDerWaalsContact C-N 3.33Å; K56-K58 PolarHBondContact O-N 3.32Å; K58-E60 VanDerWaalsContact C-N 3.25Å; K58-E60 PolarHBondContact O-N 3.49Å; K58-E61 PolarHBondContact O-N 3.45Å; K58-E62 PolarHBondContact O-N 3.12Å
59E79Confident80.2Confident134 Ų134113.4 Ų113.463%0.62656%0.557SS**Hα-helixtrans-66.5-25.6176.3-72.1179.5169.100113I55 K56I55-E59 PolarHBondContact O-N 2.92Å; K56-E59 PolarHBondContact O-N 3.14Å
60E74.4Confident79.6Confident139 Ų139114.2 Ų114.265%0.6557%0.565SS**Hα-helixtrans-83.9-15.3176.5-72.2175-17300113.1K56 Q57 K58K56-E60 WeakPolarHBondContact CE-OE1 3.46Å; K56-E60 PolarHBondContact O-N 2.93Å; Q57-E60 PolarHBondContact O-N 2.99Å; K58-E60 VanDerWaalsContact C-N 3.25Å; K58-E60 PolarHBondContact O-N 3.49Å
61E71Confident79.3Confident168 Ų168120 Ų12079%0.78559%0.592SS**Hα-helixtrans-92.6-12.4177.9-73.2179.2175.900113.5Q57 K58Q57-E61 PolarHBondContact O-N 2.92Å; K58-E61 PolarHBondContact O-N 3.45Å
62E55.2Low78.8Confident231 Ų231125.6 Ų125.6100%1.07961%0.614SS**  trans-89.30171-77.5-172.1162.100112.8K58K58-E62 PolarHBondContact O-N 3.12Å

Retrieved 62 of 62 residues in 206.7 ms (Link to these results)

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