A0A5K4FB18_SCHMA Loading...

Ovule protein

AlphaFold DB , UniProt , Accession A0A5K4FB18, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 62 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M51.5Low63Low228 Ų228118.4 Ų118.4100%1.12360%0.597SS**  0116.60-60.3175.9-176.900107.7
2K67.9Low63.3Low183 Ų183116.8 Ų116.880%0.79659%0.586SS**  trans-87.7117.4177.4-74.1-177.8178.7178.10108.5
3Q56.7Low63Low133 Ų133120.5 Ų120.562%0.62160%0.6SS**EExtended strand (participates in β ladder)trans-84.8120.9174-173.7177.377.100107.6
4S56Low63.3Low53 Ų53116.2 Ų116.237%0.37159%0.587SS.*EExtended strand (participates in β ladder)trans-111.1127.7175.2-65.80000108.9S56S4-S56 PolarHBondContact O-N 2.78Å
5Q73.3Confident63.1Low130 Ų130112.5 Ų112.561%0.60759%0.589SS**EExtended strand (participates in β ladder)trans-93.4127.5176.6-66.2-179.5-11.400108.6T53Q5-T53 HydrophobicContact CB-CG2 4.29Å
6I68.5Low63.2Low89 Ų89117 Ų11746%0.45660%0.596SS.*EExtended strand (participates in β ladder)trans-119.3119.7171.3-55.6175.1000107.3F8 H54I6-F8 HydrophobicContact CB-CZ 4.21Å; I6-F8 HydrophobicContact CB-CE2 3.89Å; I6-F8 WeakPolarHBondContact O-CE2 3.38Å; I6-F8 WeakPolarHBondContact O-CD2 2.88Å; I6-F8 HydrophobicContact CG2-CZ 3.53Å; I6-F8 HydrophobicContact CG2-CE1 4.24Å; I6-F8 HydrophobicContact CG2-CD2 4.27Å; I6-F8 HydrophobicContact CG2-CE2 3.54Å; I6-H54 PolarHBondContact N-O 3.17Å; I6-H54 PolarHBondContact O-N 2.89Å
7S68.4Low63.2Low77 Ų77113.9 Ų113.954%0.53859%0.587SS.*EExtended strand (participates in β ladder)trans-93.2131.6177.1-55.80000109.8S52S7-S52 WeakPolarHBondContact CA-O 3.1Å
8F70.3Confident63.1Low93 Ų93113.6 Ų113.641%0.40859%0.586SS.*EExtended strand (participates in β ladder)trans-112.1131177.3-62.7-93.9000108.9I6 V51 S52 H54I6-F8 HydrophobicContact CB-CZ 4.21Å; I6-F8 HydrophobicContact CB-CE2 3.89Å; I6-F8 WeakPolarHBondContact O-CE2 3.38Å; I6-F8 WeakPolarHBondContact O-CD2 2.88Å; I6-F8 HydrophobicContact CG2-CZ 3.53Å; I6-F8 HydrophobicContact CG2-CE1 4.24Å; I6-F8 HydrophobicContact CG2-CD2 4.27Å; I6-F8 HydrophobicContact CG2-CE2 3.54Å; F8-V51 WeakPolarHBondContact O-CA 2.63Å; F8-S52 PolarHBondContact N-O 2.97Å; F8-S52 PolarHBondContact O-N 2.86Å; F8-H54 HydrophobicContact CD2-CB 4.47Å; F8-H54 AromaticContact CE2-ND1 3.69Å; F8-H54 HydrophobicContact CE2-CB 3.96Å; F8-H54 AromaticContact CD2-ND1 3.97Å
9I62.5Low63.6Low126 Ų126111.8 Ų111.865%0.64658%0.581SS**EExtended strand (participates in β ladder)trans-100.1113.7173.4-59.7179.2000106.6T49I9-T49 HydrophobicContact CG2-CG2 3.36Å
10Q61Low63.7Low111 Ų111108.6 Ų108.652%0.51957%0.567SS.*EExtended strand (participates in β ladder)trans-108.1112.7177.1-165.6170.212.500109.3S50Q10-S50 PolarHBondContact N-O 3.2Å; Q10-S50 PolarHBondContact O-N 3.1Å; Q10-S50 VanDerWaalsContact O-N 3.11Å
11T57.3Low64Low79 Ų79106.8 Ų106.849%0.48556%0.564SS.*EExtended strand (participates in β ladder)trans-91.1120.8176-54.20000109.4
12H66.1Low64.9Low99 Ų99104.5 Ų104.546%0.45855%0.55SS.*EExtended strand (participates in β ladder)trans-92.8110.6172.8-63.1-95.4000108.9F48H12-F48 PolarHBondContact N-O 2.02Å
13Q59.5Low64.2Low165 Ų165104.5 Ų104.577%0.77155%0.553SS**PPolyproline II helixtrans-74.6127.1163.4-64.4-17286.500107.3G15Q13-G15 PolarHBondContact O-N 3.3Å
14C67.3Low64Low61 Ų61103.1 Ų103.141%0.41256%0.558SS.*PPolyproline II helixtrans-49.7133.7171.9-89.70000111.6C45C14-C45 VanDerWaalsContact CB-CB 3.43Å; C14-C45 WeakPolarHBondContact CB-SG 3.49Å; C14-C45 WeakPolarHBondContact SG-CA 3.49Å; C14-C45 WeakPolarHBondContact SG-CB 3.49Å; C14-C45 CovalentContact SG-SG 2.02Å; C14-C45 PolarHBondContact SG-SG 3.38Å; C14-C45 HydrophobicContact CB-CB 3.43Å
15G60Low63.9Low60 Ų60105.4 Ų105.462%0.61958%0.58SS**PPolyproline II helixtrans-70.6153.2170.800000112.6Q13Q13-G15 PolarHBondContact O-N 3.3Å
16R64.2Low62.8Low185 Ų185106.9 Ų106.970%0.69859%0.587SS**PPolyproline II helixtrans-64.7135.4170.2-65.6156175.5-139.610.3109.4E39R16-E39 IonicContact CZ-OE1 3.33Å; R16-E39 IonicContact NH1-OE2 3.55Å; R16-E39 PolarHBondContact NH1-OE1 3.25Å; R16-E39 IonicContact NH1-OE1 2.78Å; R16-E39 PolarHBondContact NE-OE1 3.46Å; R16-E39 IonicContact NE-OE1 3.38Å; R16-E39 WeakPolarHBondContact CG-OE1 3.48Å; R16-E39 HydrophobicContact CG-CG 4.43Å; R16-E39 WeakPolarHBondContact CD-OE1 3.45Å; R16-E39 HydrophobicContact CB-CG 4.07Å
17S64.2Low61.8Low64 Ų64111.4 Ų111.445%0.44861%0.611SS.*EExtended strand (participates in β ladder)trans-106.8132.3171.7-170.60000110T40S17-T40 PolarHBondContact N-O 3.09Å; S17-T40 VanDerWaalsContact N-O 3.13Å; S17-T40 PolarHBondContact O-N 3.47Å; S17-T40 VanDerWaalsContact O-O 3.08Å
18L60.7Low61Low109 Ų109112.9 Ų112.957%0.57162%0.616SS**EExtended strand (participates in β ladder)trans-95.1111.3177.3-165.688.5000108.4C37L18-C37 HydrophobicContact CG-CB 3.84Å; L18-C37 HydrophobicContact CD2-CB 3.84Å; L18-C37 HydrophobicContact CD1-CB 4Å
19T73.1Confident60.2Low80 Ų80113.8 Ų113.849%0.49163%0.632SS.*EExtended strand (participates in β ladder)trans-100.5114.4173.7-54.90000108.7T38T19-T38 PolarHBondContact N-O 3.3Å; T19-T38 PolarHBondContact O-N 3.01Å
20C64.8Low60Low46 Ų46114.6 Ų114.631%0.31164%0.643SS.*EExtended strand (participates in β ladder)trans-98.4131.9174-55.70000109.6H22 C37C20-H22 PolarHBondContact O-N 3.03Å; C20-C37 HydrophobicContact CB-CB 4.08Å; C20-C37 WeakPolarHBondContact CB-SG 3.11Å; C20-C37 WeakPolarHBondContact SG-CB 3.43Å; C20-C37 CovalentContact SG-SG 2.05Å; C20-C37 PolarHBondContact SG-SG 2.99Å
21S71.5Confident59.4Low71 Ų71116.8 Ų116.850%0.49766%0.658SS.*  trans-69.589.7176.2-60.10000110.3H23S21-H23 PolarHBondContact O-N 3.43Å
22H68.7Low59.1Low180 Ų180124.2 Ų124.283%0.83368%0.677SS**  trans-76.995.2167.4-96.9128.8000109.3C20 S24C20-H22 PolarHBondContact O-N 3.03Å; H22-S24 PolarHBondContact O-N 2.94Å; H22-S24 VanDerWaalsContact O-N 3.13Å
23H54.8Low59.1Low184 Ų184124.8 Ų124.885%0.85269%0.692SS**  trans-85.677.6175.3-135.9-97.7000110.5S21S21-H23 PolarHBondContact O-N 3.43Å
24S52.2Low59.2Low103 Ų103122.2 Ų122.272%0.7269%0.69SS**  trans61.5149.7162.8-159.50000118.2H22 Q26H22-S24 PolarHBondContact O-N 2.94Å; H22-S24 VanDerWaalsContact O-N 3.13Å; S24-Q26 PolarHBondContact O-N 3.15Å
25A53.4Low59.1Low101 Ų101122.5 Ų122.584%0.83569%0.691SS**SBendtrans-71.647-173.300000114.8
26Q49.2Very low59.7Low162 Ų162124.4 Ų124.476%0.75769%0.692SS**  trans-87.9112.5164.5-78.4-171.616.300108.6S24 V28S24-Q26 PolarHBondContact O-N 3.15Å; Q26-V28 HydrophobicContact CB-CG2 4.31Å; Q26-V28 PolarHBondContact O-N 3.34Å
27L49.3Very low60.1Low184 Ų184118.4 Ų118.496%0.96368%0.678SS**  trans-58.270.6169.5-75.2142.4000110.5
28V49.9Very low60.8Low107 Ų107119.5 Ų119.565%0.64868%0.682SS**  trans-89.1125.1167.7-175.10000106.8Q26 T30Q26-V28 HydrophobicContact CB-CG2 4.31Å; Q26-V28 PolarHBondContact O-N 3.34Å; V28-T30 PolarHBondContact O-N 2.97Å
29P53.6Low61.2Low113 Ų113119.2 Ų119.273%0.73468%0.678SS**  trans-55.9124.8-173.416.2-28000111.7N31P29-N31 VanDerWaalsContact C-N 3.3Å; P29-N31 PolarHBondContact O-N 3.11Å
30T58.5Low61Low143 Ų143118.4 Ų118.488%0.87767%0.673SS**SBendtrans-62.682.2-179-16.50000110.3V28V28-T30 PolarHBondContact O-N 2.97Å
31N50Low61.1Low156 Ų156120 Ų12083%0.83468%0.682SS**  trans-14330.3172.3-128.2-27.3000112.2P29P29-N31 VanDerWaalsContact C-N 3.3Å; P29-N31 PolarHBondContact O-N 3.11Å
32R50.7Low60.8Low235 Ų235119.2 Ų119.289%0.88768%0.675SS**SBendtrans-133.3151.5167.8-77-172.3165.7-170.7-4.3109.4
33S64.9Low60.5Low111 Ų111116.7 Ų116.778%0.77667%0.674SS**  trans-43.2139.1-178.5-56.40000111.6
34P62.2Low60.9Low112 Ų112114.9 Ų114.973%0.72767%0.671SS**PPolyproline II helixtrans-52.1145.4-17521.5-33.3000110.9
35P65.3Low61.4Low67 Ų67111.8 Ų111.844%0.43565%0.649SS.*PPolyproline II helixtrans-54.2142.1179.723.5-33000109.6C37P35-C37 PolarHBondContact O-N 2.81Å
36P73.4Confident61.6Low99 Ų99112.4 Ų112.464%0.64364%0.637SS**PPolyproline II helixtrans-57.9128.1-177.624.8-33.5000109.4
37C72.7Confident62.2Low60 Ų60111.4 Ų111.441%0.40563%0.633SS.*EExtended strand (participates in β ladder)trans-100130.5170.9-62.20000108.3L18 C20 P35L18-C37 HydrophobicContact CG-CB 3.84Å; L18-C37 HydrophobicContact CD2-CB 3.84Å; L18-C37 HydrophobicContact CD1-CB 4Å; C20-C37 HydrophobicContact CB-CB 4.08Å; C20-C37 WeakPolarHBondContact CB-SG 3.11Å; C20-C37 WeakPolarHBondContact SG-CB 3.43Å; C20-C37 CovalentContact SG-SG 2.05Å; C20-C37 PolarHBondContact SG-SG 2.99Å; P35-C37 PolarHBondContact O-N 2.81Å
38T77.1Confident62.7Low86 Ų86109.2 Ų109.253%0.52862%0.616SS.*EExtended strand (participates in β ladder)trans-102.7123.4175.9-52.60000108.7T19 T40T19-T38 PolarHBondContact N-O 3.3Å; T19-T38 PolarHBondContact O-N 3.01Å; T38-T40 PolarHBondContact O-N 3.06Å
39E71.1Confident63.6Low103 Ų103108.2 Ų108.248%0.48161%0.61SS.*EExtended strand (participates in β ladder)trans-75114.6171.6-162.6-179.5113.700108.4R16R16-E39 IonicContact CZ-OE1 3.33Å; R16-E39 IonicContact NH1-OE2 3.55Å; R16-E39 PolarHBondContact NH1-OE1 3.25Å; R16-E39 IonicContact NH1-OE1 2.78Å; R16-E39 PolarHBondContact NE-OE1 3.46Å; R16-E39 IonicContact NE-OE1 3.38Å; R16-E39 WeakPolarHBondContact CG-OE1 3.48Å; R16-E39 HydrophobicContact CG-CG 4.43Å; R16-E39 WeakPolarHBondContact CD-OE1 3.45Å; R16-E39 HydrophobicContact CB-CG 4.07Å
40T67.3Low64.6Low64 Ų64105.1 Ų105.139%0.39359%0.591SS.*EExtended strand (participates in β ladder)trans-116.2118177.4-50.90000108.9S17 T38S17-T40 PolarHBondContact N-O 3.09Å; S17-T40 VanDerWaalsContact N-O 3.13Å; S17-T40 PolarHBondContact O-N 3.47Å; S17-T40 VanDerWaalsContact O-O 3.08Å; T38-T40 PolarHBondContact O-N 3.06Å
41T68Low65.4Low80 Ų80103.1 Ų103.149%0.49158%0.578SS.*  trans-82.4122.9162.8-57.70000107
42P63.8Low66.3Low54 Ų5498 Ų9835%0.35155%0.554SS.*  trans-57.9129.5178.7-15.625.2000109.7N44 C45P42-N44 PolarHBondContact O-N 3.03Å; P42-C45 PolarHBondContact O-N 3.08Å
43P64.3Low67.4Low126 Ų12690 Ų9082%0.81853%0.532SS*.THydrogen-bonded Turntrans-63.6-29.3-176.223.5-33.2000112.5C45P43-C45 PolarHBondContact O-N 3.34Å
44N62.6Low68.1Low147 Ų14790.6 Ų90.679%0.78652%0.522SS*.THydrogen-bonded Turntrans-100.456.1175.6-72.1-27.4000111P42 L46P42-N44 PolarHBondContact O-N 3.03Å; N44-L46 PolarHBondContact O-N 3.13Å
45C61.3Low68.7Low37 Ų3790.8 Ų90.825%0.2551%0.513CS..  trans-77.585.5169.7-101.50000109.9C14 P42 P43 Q47C14-C45 VanDerWaalsContact CB-CB 3.43Å; C14-C45 WeakPolarHBondContact CB-SG 3.49Å; C14-C45 WeakPolarHBondContact SG-CA 3.49Å; C14-C45 WeakPolarHBondContact SG-CB 3.49Å; C14-C45 CovalentContact SG-SG 2.02Å; C14-C45 PolarHBondContact SG-SG 3.38Å; C14-C45 HydrophobicContact CB-CB 3.43Å; P42-C45 PolarHBondContact O-N 3.08Å; P43-C45 PolarHBondContact O-N 3.34Å; C45-Q47 PolarHBondContact O-N 2.85Å
46L59Low68.6Low115 Ų11590.3 Ų90.360%0.60251%0.512SS*.  trans-54.9112.3170.3-73.7169.2000107.7N44 F48N44-L46 PolarHBondContact O-N 3.13Å; L46-F48 HydrophobicContact CB-CE1 4.03Å; L46-F48 VanDerWaalsContact O-N 3.15Å; L46-F48 PolarHBondContact O-N 3.34Å; L46-F48 WeakPolarHBondContact O-CE2 3.42Å; L46-F48 WeakPolarHBondContact O-CD2 3.08Å; L46-F48 HydrophobicContact CG-CZ 4.03Å; L46-F48 HydrophobicContact CG-CE2 4.39Å; L46-F48 HydrophobicContact CD1-CZ 3.5Å; L46-F48 HydrophobicContact CD1-CE2 4.2Å; L46-F48 HydrophobicContact CD1-CE1 4.23Å; L46-F48 HydrophobicContact CB-CZ 3.34Å; L46-F48 HydrophobicContact CB-CE2 3.31Å; L46-F48 HydrophobicContact CB-CD2 4.01Å
47Q61.2Low68.1Low141 Ų14190.3 Ų90.366%0.65951%0.509SS*.  trans-67.7110.5168.7-69.6-174.3-34.600106.9C45C45-Q47 PolarHBondContact O-N 2.85Å
48F60.8Low67.3Low138 Ų13893.9 Ų93.961%0.60552%0.52SS*.EExtended strand (participates in β ladder)trans-97.2123.9172.8-62.5-78.7000109H12 L46H12-F48 PolarHBondContact N-O 2.02Å; L46-F48 HydrophobicContact CB-CE1 4.03Å; L46-F48 VanDerWaalsContact O-N 3.15Å; L46-F48 PolarHBondContact O-N 3.34Å; L46-F48 WeakPolarHBondContact O-CE2 3.42Å; L46-F48 WeakPolarHBondContact O-CD2 3.08Å; L46-F48 HydrophobicContact CG-CZ 4.03Å; L46-F48 HydrophobicContact CG-CE2 4.39Å; L46-F48 HydrophobicContact CD1-CZ 3.5Å; L46-F48 HydrophobicContact CD1-CE2 4.2Å; L46-F48 HydrophobicContact CD1-CE1 4.23Å; L46-F48 HydrophobicContact CB-CZ 3.34Å; L46-F48 HydrophobicContact CB-CE2 3.31Å; L46-F48 HydrophobicContact CB-CD2 4.01Å
49T69Low66.6Low85 Ų85100.2 Ų100.252%0.52153%0.534SS..EExtended strand (participates in β ladder)trans-97.3119.7174-61.60000107.9I9I9-T49 HydrophobicContact CG2-CG2 3.36Å
50S74.3Confident65.8Low48 Ų48101.8 Ų101.834%0.33655%0.546SS..EExtended strand (participates in β ladder)trans-100.6140.4169.465.50000109.6Q10Q10-S50 PolarHBondContact N-O 3.2Å; Q10-S50 PolarHBondContact O-N 3.1Å; Q10-S50 VanDerWaalsContact O-N 3.11Å
51V74.7Confident65.4Low101 Ų101107.3 Ų107.361%0.61257%0.567SS**EExtended strand (participates in β ladder)trans-109122.1172.3-1770000107.3F8F8-V51 WeakPolarHBondContact O-CA 2.63Å
52S69.3Low64.7Low48 Ų48111.3 Ų111.334%0.33660%0.598SS.*EExtended strand (participates in β ladder)trans-119.5143.1173.956.50000110.2S7 F8S7-S52 WeakPolarHBondContact CA-O 3.1Å; F8-S52 PolarHBondContact N-O 2.97Å; F8-S52 PolarHBondContact O-N 2.86Å
53T73.1Confident64.7Low68 Ų68114.2 Ų114.242%0.41761%0.611SS.*EExtended strand (participates in β ladder)trans-111.6120.5179.6-50.40000108.7Q5Q5-T53 HydrophobicContact CB-CG2 4.29Å
54H79Confident64.8Low124 Ų124113.5 Ų113.557%0.57460%0.6SS**EExtended strand (participates in β ladder)trans-97128168.1-76.5150.6000110.2I6 F8I6-H54 PolarHBondContact N-O 3.17Å; I6-H54 PolarHBondContact O-N 2.89Å; F8-H54 HydrophobicContact CD2-CB 4.47Å; F8-H54 AromaticContact CE2-ND1 3.69Å; F8-H54 HydrophobicContact CE2-CB 3.96Å; F8-H54 AromaticContact CD2-ND1 3.97Å
55H75.5Confident64.9Low116 Ų116111.7 Ų111.754%0.53759%0.589SS.*EExtended strand (participates in β ladder)trans-85110168.4-61.1105.2000108.3
56S63.4Low65.1Low57 Ų57116.1 Ų116.140%0.39961%0.609SS.*EExtended strand (participates in β ladder)trans-95.2115.4171.1-169.80000109.1S4 Q58S4-S56 PolarHBondContact O-N 2.78Å; S56-Q58 PolarHBondContact O-N 3.13Å
57V63.1Low65.5Low98 Ų98116.1 Ų116.159%0.59461%0.61SS**EExtended strand (participates in β ladder)trans-87.998.7166.3-178.70000106.4R59V57-R59 PolarHBondContact O-N 2.05Å; V57-R59 VanDerWaalsContact O-N 3.1Å
58Q55.6Low65.8Low136 Ų136114.5 Ų114.564%0.63661%0.606SS**  trans-66112.8168.2-65.8-175.9-70.900107.2S56 D60S56-Q58 PolarHBondContact O-N 3.13Å; Q58-D60 PolarHBondContact O-N 2.71Å
59R61.7Low66.1Low218 Ų218112.8 Ų112.882%0.82361%0.606SS**  trans-69.5102.2163.2-70.2-167.1-172.7177.43.6106.4V57 H61V57-R59 PolarHBondContact O-N 2.05Å; V57-R59 VanDerWaalsContact O-N 3.1Å; R59-H61 PolarHBondContact O-N 2.82Å; R59-H61 PolarHBondContact O-ND1 3.2Å; R59-H61 VanDerWaalsContact O-ND1 3.09Å
60D56Low65.9Low137 Ų137114.9 Ų114.973%0.73361%0.613SS**  trans-56.2108.3165.3-162-121.7000106.5Q58 S62Q58-D60 PolarHBondContact O-N 2.71Å; D60-S62 PolarHBondContact O-N 2.78Å; D60-S62 VanDerWaalsContact O-N 3.08Å; D60-S62 WeakPolarHBondContact OD1-CB 3.1Å
61H58.9Low65.2Low180 Ų180120.5 Ų120.583%0.83364%0.636SS**  trans-81.373.5169.3-75.467000106.4R59R59-H61 PolarHBondContact O-N 2.82Å; R59-H61 PolarHBondContact O-ND1 3.2Å; R59-H61 VanDerWaalsContact O-ND1 3.09Å
62S52.2Low64.3Low163 Ų163122.3 Ų122.3100%1.1464%0.638SS**  trans-88.50160.368.10000109.2D60D60-S62 PolarHBondContact O-N 2.78Å; D60-S62 VanDerWaalsContact O-N 3.08Å; D60-S62 WeakPolarHBondContact OD1-CB 3.1Å

Retrieved 62 of 62 residues in 18.5 ms (Link to these results)