A0AA82N849_SCHMA Loading...

26S proteasome complex subunit SEM1 AlphaSync

Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins.

AlphaFold DB , UniProt , Accession A0AA82N849, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 78 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M38.7Very low58.1Low240 Ų240138.7 Ų138.7100%1.18273%0.731SS**  01100-62.9-156.991.600106.4S3M1-S3 PolarHBondContact O-N 3Å
2S48.1Very low59.7Low120 Ų120132.3 Ų132.384%0.83970%0.701SS**  trans-69.8108.2168.3-55.90000107.2
3S52.7Low61Low96 Ų96133.2 Ų133.267%0.67170%0.699SS**  trans-101.388.7155.7-77.90000105.3M1 Q5M1-S3 PolarHBondContact O-N 3Å; S3-Q5 PolarHBondContact O-N 3.04Å
4E50.1Low62.1Low176 Ų176132.9 Ų132.982%0.82269%0.692SS**  trans-50.398.2148-70.2172.4126.100105.7L6E4-L6 PolarHBondContact O-N 2.83Å
5Q53.4Low63Low156 Ų156127.1 Ų127.173%0.72967%0.671SS**  trans-67.294.8160.6-70.9-68-14.300104.2S3 Q7S3-Q5 PolarHBondContact O-N 3.04Å; Q5-Q7 PolarHBondContact O-N 2.99Å
6L48.5Very low63.7Low155 Ų155124.1 Ų124.181%0.81266%0.655SS**  trans-48.893.9158.5-76.8153.3000105.8E4 D8E4-L6 PolarHBondContact O-N 2.83Å; L6-D8 PolarHBondContact O-N 2.82Å
7Q55.7Low64.5Low116 Ų116119.2 Ų119.254%0.54264%0.641SS.*  trans-59112.6168.3-155.697.85.100104.6Q5 Q11 V12Q5-Q7 PolarHBondContact O-N 2.99Å; Q7-Q11 HydrophobicContact CG-CB 4.16Å; Q7-V12 HydrophobicContact CB-CG2 3.68Å; Q7-V12 HydrophobicContact CG-CG2 3.73Å
8D70.2Confident65.1Low105 Ų105116.6 Ų116.656%0.56163%0.626SS**  trans-49.3136.6179.9-98-42.2000108.3L6 E10 Q11 V12L6-D8 PolarHBondContact O-N 2.82Å; D8-E10 PolarHBondContact O-N 2.67Å; D8-Q11 HydrophobicContact CB-CG 4.43Å; D8-Q11 WeakPolarHBondContact O-CA 3.47Å; D8-Q11 PolarHBondContact O-N 2.9Å; D8-V12 PolarHBondContact O-N 2.92Å
9P73Confident65.5Low104 Ų104117.4 Ų117.468%0.67563%0.63SS**Hα-helixtrans-55.1-28.8-176.121.1-32.5000112.3V12 E13P9-V12 PolarHBondContact O-N 2.88Å; P9-E13 WeakPolarHBondContact O-CB 3.16Å; P9-E13 PolarHBondContact O-N 2.95Å
10E74.4Confident66.1Low155 Ų155119.7 Ų119.772%0.72463%0.634SS**Hα-helixtrans-66.8-40.5173.7-168.2170.9-164.300112.6D8 E13 E14D8-E10 PolarHBondContact O-N 2.67Å; E10-E13 PolarHBondContact O-N 3.43Å; E10-E14 WeakPolarHBondContact O-CB 3.21Å; E10-E14 PolarHBondContact O-N 2.85Å
11Q74.7Confident66.7Low103 Ų103118 Ų11848%0.48163%0.625SS.*Hα-helixtrans-71-32.4174-69.6-156.218.500112.6Q7 D8 E13 A15Q7-Q11 HydrophobicContact CG-CB 4.16Å; D8-Q11 HydrophobicContact CB-CG 4.43Å; D8-Q11 WeakPolarHBondContact O-CA 3.47Å; D8-Q11 PolarHBondContact O-N 2.9Å; Q11-E13 VanDerWaalsContact C-N 3.34Å; Q11-A15 WeakPolarHBondContact O-CB 3.46Å; Q11-A15 PolarHBondContact O-N 3.29Å
12V77.2Confident68.2Low61 Ų61114 Ų11437%0.3761%0.608SS.*Hα-helixtrans-66-40.7172.4178.80000110.2Q7 D8 P9 L16Q7-V12 HydrophobicContact CB-CG2 3.68Å; Q7-V12 HydrophobicContact CG-CG2 3.73Å; D8-V12 PolarHBondContact O-N 2.92Å; P9-V12 PolarHBondContact O-N 2.88Å; V12-L16 HydrophobicContact CG1-CD1 3.96Å; V12-L16 HydrophobicContact CG1-CG 4.36Å; V12-L16 VanDerWaalsContact O-CB 3.25Å; V12-L16 WeakPolarHBondContact O-CB 3.48Å; V12-L16 WeakPolarHBondContact O-CG 3.44Å; V12-L16 PolarHBondContact O-N 3.33Å
13E76.2Confident69.7Low145 Ų145116.6 Ų116.668%0.67860%0.604SS**Hα-helixtrans-67.2-42.3176.4-173.2172.6-17500112P9 E10 Q11 L16 G17P9-E13 WeakPolarHBondContact O-CB 3.16Å; P9-E13 PolarHBondContact O-N 2.95Å; E10-E13 PolarHBondContact O-N 3.43Å; Q11-E13 VanDerWaalsContact C-N 3.34Å; E13-L16 PolarHBondContact O-N 3.42Å; E13-G17 PolarHBondContact O-N 3Å
14E76.1Confident71.1Confident128 Ų128116.1 Ų116.160%0.59859%0.592SS**Hα-helixtrans-61-48.4172.7-172.8175.3-161.900110.9E10 L16 G17 I18E10-E14 WeakPolarHBondContact O-CB 3.21Å; E10-E14 PolarHBondContact O-N 2.85Å; E14-L16 VanDerWaalsContact C-N 3.33Å; E14-L16 PolarHBondContact O-N 2.98Å; E14-G17 WeakPolarHBondContact O-CA 3.44Å; E14-G17 PolarHBondContact O-N 3.39Å; E14-G17 VanDerWaalsContact O-N 3.09Å; E14-I18 HydrophobicContact CG-CD1 4.17Å; E14-I18 WeakPolarHBondContact O-CB 3.38Å; E14-I18 VanDerWaalsContact O-CG1 3.3Å; E14-I18 WeakPolarHBondContact O-CG1 3.44Å; E14-I18 PolarHBondContact O-N 2.81Å
15A75.8Confident72.7Confident46 Ų46116.1 Ų116.138%0.3859%0.589SS.*Hα-helixtrans-63.5-35176.100000113.1Q11 I18 L19Q11-A15 WeakPolarHBondContact O-CB 3.46Å; Q11-A15 PolarHBondContact O-N 3.29Å; A15-I18 WeakPolarHBondContact O-CB 3.36Å; A15-L19 VanDerWaalsContact O-CB 3.28Å; A15-L19 WeakPolarHBondContact O-CB 3.5Å; A15-L19 PolarHBondContact O-N 3.48Å
16L75.3Confident74.2Confident80 Ų80117.1 Ų117.142%0.41959%0.594SS.*Hα-helixtrans-71.4-33.9172.4-79.7170.3000112V12 E13 E14 L19 K20V12-L16 HydrophobicContact CG1-CD1 3.96Å; V12-L16 HydrophobicContact CG1-CG 4.36Å; V12-L16 VanDerWaalsContact O-CB 3.25Å; V12-L16 WeakPolarHBondContact O-CB 3.48Å; V12-L16 WeakPolarHBondContact O-CG 3.44Å; V12-L16 PolarHBondContact O-N 3.33Å; E13-L16 PolarHBondContact O-N 3.42Å; E14-L16 VanDerWaalsContact C-N 3.33Å; E14-L16 PolarHBondContact O-N 2.98Å; L16-L19 HydrophobicContact CD2-CD2 4.49Å; L16-K20 WeakPolarHBondContact O-CB 3.05Å; L16-K20 WeakPolarHBondContact O-CD 3.47Å; L16-K20 WeakPolarHBondContact O-CG 3.3Å; L16-K20 PolarHBondContact O-N 3.17Å
17G77Confident76.1Confident40 Ų40117.9 Ų117.941%0.41259%0.593SS.*Hα-helixtrans-63.8-45.9173.200000110.6E13 E14 K20 D21E13-G17 PolarHBondContact O-N 3Å; E14-G17 WeakPolarHBondContact O-CA 3.44Å; E14-G17 PolarHBondContact O-N 3.39Å; E14-G17 VanDerWaalsContact O-N 3.09Å; G17-K20 PolarHBondContact O-N 3.35Å; G17-D21 PolarHBondContact O-N 3.21Å; G17-D21 VanDerWaalsContact O-N 3.09Å
18I75Confident77.7Confident73 Ų73120.5 Ų120.537%0.37460%0.603SS.*Hα-helixtrans-56.4-52.9172.2-77.1168.4000111.2E14 A15 K20 D21 E24E14-I18 HydrophobicContact CG-CD1 4.17Å; E14-I18 WeakPolarHBondContact O-CB 3.38Å; E14-I18 VanDerWaalsContact O-CG1 3.3Å; E14-I18 WeakPolarHBondContact O-CG1 3.44Å; E14-I18 PolarHBondContact O-N 2.81Å; A15-I18 WeakPolarHBondContact O-CB 3.36Å; I18-K20 PolarHBondContact O-N 3.45Å; I18-K20 VanDerWaalsContact O-N 3.14Å; I18-D21 PolarHBondContact O-N 2.98Å; I18-E24 VanDerWaalsContact C-OE2 3.31Å; I18-E24 WeakPolarHBondContact CA-OE2 3.46Å; I18-E24 WeakPolarHBondContact CB-OE2 3.28Å; I18-E24 WeakPolarHBondContact CG1-OE1 3.39Å; I18-E24 WeakPolarHBondContact CG1-OE2 3.41Å; I18-E24 WeakPolarHBondContact CG2-OE1 3.17Å; I18-E24 WeakPolarHBondContact CG2-OE2 3.3Å
19L71.9Confident78.6Confident132 Ų132123.6 Ų123.669%0.69161%0.614SS**Hα-helixtrans-61.9-25.8178.9-17563000113.5A15 L16A15-L19 VanDerWaalsContact O-CB 3.28Å; A15-L19 WeakPolarHBondContact O-CB 3.5Å; A15-L19 PolarHBondContact O-N 3.48Å; L16-L19 HydrophobicContact CD2-CD2 4.49Å
20K78.8Confident79.2Confident163 Ų163126.9 Ų126.971%0.70962%0.618SS**Hα-helixtrans-87.3-15.7176.8-73.9171-173.8178.10113L16 G17 I18 D22L16-K20 WeakPolarHBondContact O-CB 3.05Å; L16-K20 WeakPolarHBondContact O-CD 3.47Å; L16-K20 WeakPolarHBondContact O-CG 3.3Å; L16-K20 PolarHBondContact O-N 3.17Å; G17-K20 PolarHBondContact O-N 3.35Å; I18-K20 PolarHBondContact O-N 3.45Å; I18-K20 VanDerWaalsContact O-N 3.14Å; K20-D22 PolarHBondContact O-N 3.47Å
21D77.1Confident79.7Confident83 Ų83126 Ų12644%0.44461%0.614SS.*  trans-91.488.6176.4-163.3-6.1000109.9G17 I18 K23 E24G17-D21 PolarHBondContact O-N 3.21Å; G17-D21 VanDerWaalsContact O-N 3.09Å; I18-D21 PolarHBondContact O-N 2.98Å; D21-K23 PolarHBondContact O-N 3.34Å; D21-K23 PolarHBondContact OD1-N 2.98Å; D21-E24 WeakPolarHBondContact O-CB 3.25Å; D21-E24 PolarHBondContact O-N 3.09Å
22D70.6Confident80.2Confident157 Ų157128.6 Ų128.684%0.8463%0.631SS**THydrogen-bonded Turntrans-56.4-10.6175.7-67.3-22.9000113.7K20K20-D22 PolarHBondContact O-N 3.47Å
23K79.3Confident80.6Confident175 Ų175133.9 Ų133.976%0.76164%0.644SS**THydrogen-bonded Turntrans-96.85.1175.8-54.7-166.6-163.770.70114.2D21 F25D21-K23 PolarHBondContact O-N 3.34Å; D21-K23 PolarHBondContact OD1-N 2.98Å; K23-F25 VanDerWaalsContact C-N 3.26Å; K23-F25 PolarHBondContact O-N 3.06Å
24E83.7Confident81Confident86 Ų86132.1 Ų132.140%0.40264%0.639SS.*  trans-66.1-29.3-177.3-179.3163.615900113.5I18 D21 E26I18-E24 VanDerWaalsContact C-OE2 3.31Å; I18-E24 WeakPolarHBondContact CA-OE2 3.46Å; I18-E24 WeakPolarHBondContact CB-OE2 3.28Å; I18-E24 WeakPolarHBondContact CG1-OE1 3.39Å; I18-E24 WeakPolarHBondContact CG1-OE2 3.41Å; I18-E24 WeakPolarHBondContact CG2-OE1 3.17Å; I18-E24 WeakPolarHBondContact CG2-OE2 3.3Å; D21-E24 WeakPolarHBondContact O-CB 3.25Å; D21-E24 PolarHBondContact O-N 3.09Å; E24-E26 PolarHBondContact O-N 2.79Å
25F83.2Confident81.2Confident175 Ų175131.8 Ų131.877%0.76865%0.646SS**SBendtrans-79120.7173.5-68.4-82.3000110.4K23K23-F25 VanDerWaalsContact C-N 3.26Å; K23-F25 PolarHBondContact O-N 3.06Å
26E84.9Confident81.5Confident178 Ų178134.5 Ų134.583%0.83266%0.662SS**  trans-62.8132166.3-60.9-175.7-171.700109.1E24 F28E24-E26 PolarHBondContact O-N 2.79Å; E26-F28 PolarHBondContact O-N 3.4Å; E26-F28 VanDerWaalsContact O-N 3.12Å
27E87.4Confident82Confident170 Ų170135.5 Ų135.579%0.79467%0.665SS**  trans-62.6115.5176.5-174.4174.3-178.800108.9
28F89Confident82.1Confident172 Ų172139.1 Ų139.175%0.75467%0.671SS**PPolyproline II helixtrans-61.3141.8177.6-73.7-90.9000110.6E26 K30E26-F28 PolarHBondContact O-N 3.4Å; E26-F28 VanDerWaalsContact O-N 3.12Å; F28-K30 PolarHBondContact O-N 3.34Å
29E90Very high82.4Confident170 Ų170141.4 Ų141.479%0.79468%0.68SS**PPolyproline II helixtrans-57.8135.9171.3-67.4-65.6163.600109.8E31E29-E31 PolarHBondContact O-N 2.85Å
30K85.7Confident82.7Confident173 Ų173141.9 Ų141.975%0.75268%0.682SS**PPolyproline II helixtrans-72.5126.2177.1-69.3178.8-177.9170.60109.8F28 N32F28-K30 PolarHBondContact O-N 3.34Å; K30-N32 PolarHBondContact O-N 2.87Å
31E84.9Confident82.6Confident137 Ų137138.1 Ų138.164%0.6468%0.676SS**PPolyproline II helixtrans-62.1134.1172.7-67.974.4-162.900110.7E29 W33E29-E31 PolarHBondContact O-N 2.85Å; E31-W33 HydrophobicContact CB-CG 4.36Å
32N85.2Confident82.6Confident157 Ų157137.5 Ų137.584%0.8467%0.673SS**  trans-98.927.8-174.469.1-29.9000113.6K30K30-N32 PolarHBondContact O-N 2.87Å
33W85.8Confident83Confident171 Ų171136 Ų13665%0.64866%0.664SS**  trans-68.9136.6175.648.52.8000113.2E31 E37E31-W33 HydrophobicContact CB-CG 4.36Å; W33-E37 VanDerWaalsContact CA-OE2 3.25Å; W33-E37 WeakPolarHBondContact CA-OE2 3.34Å
34L84.7Confident83Confident109 Ų109134.7 Ų134.757%0.57166%0.661SS**  trans-80.9151.2171.8-72.3142.9000109.9S36 E37L34-S36 PolarHBondContact O-N 2.87Å; L34-E37 HydrophobicContact CB-CG 4.11Å; L34-E37 PolarHBondContact N-OE2 2.91Å; L34-E37 WeakPolarHBondContact O-CA 3.47Å; L34-E37 WeakPolarHBondContact O-CB 3.43Å; L34-E37 PolarHBondContact O-N 3.39Å
35T79.7Confident83Confident121 Ų121135.5 Ų135.574%0.74267%0.671SS**G310 helixtrans-57.8-23.3173.3-480000113E37 E38T35-E37 VanDerWaalsContact C-N 3.27Å; T35-E38 WeakPolarHBondContact O-CB 3.41Å
36S83.1Confident83.1Confident103 Ų103135.8 Ų135.872%0.7267%0.667SS**G310 helixtrans-75.7-14.4174.156.60000114.3L34L34-S36 PolarHBondContact O-N 2.87Å
37E84Confident82.9Confident101 Ų101130.7 Ų130.747%0.47265%0.646SS.*G310 helixtrans-95.1-1.8177.1-61.9172.5152.500111.7W33 L34 T35 E39W33-E37 VanDerWaalsContact CA-OE2 3.25Å; W33-E37 WeakPolarHBondContact CA-OE2 3.34Å; L34-E37 HydrophobicContact CB-CG 4.11Å; L34-E37 PolarHBondContact N-OE2 2.91Å; L34-E37 WeakPolarHBondContact O-CA 3.47Å; L34-E37 WeakPolarHBondContact O-CB 3.43Å; L34-E37 PolarHBondContact O-N 3.39Å; T35-E37 VanDerWaalsContact C-N 3.27Å; E37-E39 PolarHBondContact O-N 3.34Å
38E80.3Confident82.5Confident116 Ų116126.7 Ų126.754%0.54263%0.63SS.*  trans-66.8111.1172.6-171.6176.3-175.300108.9T35T35-E38 WeakPolarHBondContact O-CB 3.41Å
39E81.3Confident82.1Confident120 Ų120124.3 Ų124.356%0.56162%0.619SS**  trans-85.2142-179.5-69.3-66.6151.500109.9E37 S41 D42E37-E39 PolarHBondContact O-N 3.34Å; E39-S41 PolarHBondContact O-N 2.93Å; E39-D42 PolarHBondContact N-OD2 3.49Å; E39-D42 VanDerWaalsContact O-CB 3.29Å; E39-D42 WeakPolarHBondContact O-CB 3.32Å; E39-D42 PolarHBondContact O-N 3.26Å
40I77.4Confident81.7Confident142 Ų142125 Ų12573%0.72861%0.614SS**G310 helixtrans-58.5-26.8178.6-65.5167.6000111.5D42 L43I40-D42 PolarHBondContact O-N 2.87Å; I40-L43 HydrophobicContact CG2-CD1 4.32Å; I40-L43 WeakPolarHBondContact O-CB 3.12Å; I40-L43 PolarHBondContact O-N 3.24Å
41S77.7Confident81.2Confident85 Ų85123.5 Ų123.559%0.59462%0.615SS**G310 helixtrans-61.3-25.6174.252.70000113.6E39 L43 Q44E39-S41 PolarHBondContact O-N 2.93Å; S41-L43 PolarHBondContact O-N 2.98Å; S41-Q44 PolarHBondContact O-N 3.03Å
42D77.4Confident80.9Confident70 Ų70123.9 Ų123.937%0.37461%0.612SS.*G310 helixtrans-72.9-14.8-178.9-59.7-17.5000112.1E39 I40 Q44 V45E39-D42 PolarHBondContact N-OD2 3.49Å; E39-D42 VanDerWaalsContact O-CB 3.29Å; E39-D42 WeakPolarHBondContact O-CB 3.32Å; E39-D42 PolarHBondContact O-N 3.26Å; I40-D42 PolarHBondContact O-N 2.87Å; D42-Q44 VanDerWaalsContact C-N 3.29Å; D42-Q44 PolarHBondContact O-N 3.36Å; D42-V45 HydrophobicContact CB-CG2 4.49Å; D42-V45 WeakPolarHBondContact O-CG2 2.97Å
43L78Confident80.2Confident125 Ų125125.4 Ų125.465%0.65461%0.613SS**G310 helixtrans-70.3-24.6177.1-63.6176.2000112.9I40 S41I40-L43 HydrophobicContact CG2-CD1 4.32Å; I40-L43 WeakPolarHBondContact O-CB 3.12Å; I40-L43 PolarHBondContact O-N 3.24Å; S41-L43 PolarHBondContact O-N 2.98Å
44Q79.7Confident79.4Confident148 Ų148122.6 Ų122.669%0.69262%0.615SS**G310 helixtrans-119.144.6-176.8-62.7-171.9-92.200111.9S41 D42 W46S41-Q44 PolarHBondContact O-N 3.03Å; D42-Q44 VanDerWaalsContact C-N 3.29Å; D42-Q44 PolarHBondContact O-N 3.36Å; Q44-W46 VanDerWaalsContact C-N 3.29Å
45V83.1Confident78.6Confident103 Ų103125.4 Ų125.462%0.62463%0.625SS**  trans-72.5-26.6177.6175.20000111.9D42D42-V45 HydrophobicContact CB-CG2 4.49Å; D42-V45 WeakPolarHBondContact O-CG2 2.97Å
46W85.2Confident77.8Confident181 Ų181126.1 Ų126.169%0.68662%0.623SS**SBendtrans-94.4139.2-177.5-64.357.7000109.3Q44 D48 W50Q44-W46 VanDerWaalsContact C-N 3.29Å; W46-D48 PolarHBondContact O-N 3.46Å; W46-W50 HydrophobicContact CE3-CD2 4.22Å; W46-W50 AromaticContact CE3-CE3 3.55Å; W46-W50 HydrophobicContact CE3-CE3 3.55Å; W46-W50 HydrophobicContact CE3-CH2 4.46Å; W46-W50 AromaticContact CE3-CZ3 3.71Å; W46-W50 HydrophobicContact CE3-CZ3 3.71Å; W46-W50 HydrophobicContact CH2-CZ3 4.32Å; W46-W50 AromaticContact CZ3-CE3 3.59Å; W46-W50 HydrophobicContact CZ3-CE3 3.59Å; W46-W50 HydrophobicContact CZ3-CH2 4.24Å; W46-W50 AromaticContact CZ3-CZ3 3.35Å; W46-W50 HydrophobicContact CZ3-CZ3 3.35Å
47D81.1Confident76.9Confident71 Ų71126.2 Ų126.238%0.3862%0.616SS.*  trans-69.6122.8178.2-174-17.8000109.2K49 W50D47-K49 PolarHBondContact O-N 3.36Å; D47-K49 VanDerWaalsContact OD1-CB 3.28Å; D47-K49 WeakPolarHBondContact OD1-CB 2.87Å; D47-K49 WeakPolarHBondContact OD1-CE 3.42Å; D47-K49 VanDerWaalsContact OD1-CG 3.3Å; D47-K49 WeakPolarHBondContact OD1-CG 2.97Å; D47-K49 PolarHBondContact OD1-N 2.85Å; D47-K49 IonicContact OD1-NZ 2.72Å; D47-K49 PolarHBondContact OD1-NZ 3.27Å; D47-K49 WeakPolarHBondContact OD2-CE 3.09Å; D47-K49 IonicContact OD2-NZ 2.63Å; D47-K49 PolarHBondContact OD2-NZ 3.39Å; D47-W50 VanDerWaalsContact O-CB 3.29Å; D47-W50 WeakPolarHBondContact O-CB 3.28Å; D47-W50 PolarHBondContact O-N 3.03Å
48D80Confident76.4Confident85 Ų85125.9 Ų125.946%0.45562%0.617SS.*G310 helixtrans-53.1-20.5176.5-61.1-22.3000112.6W46 W50 D51 Y52W46-D48 PolarHBondContact O-N 3.46Å; D48-W50 PolarHBondContact O-N 2.99Å; D48-D51 PolarHBondContact O-N 3.3Å; D48-D51 VanDerWaalsContact O-N 3.12Å; D48-Y52 PolarHBondContact O-N 3.25Å; D48-Y52 VanDerWaalsContact O-N 3.09Å
49K79.1Confident76.6Confident122 Ų122126.5 Ų126.553%0.5362%0.62SS.*G310 helixtrans-66.7-15.9172.2-63.9-175-66.4-63.80114.5D47 D51 Y52D47-K49 PolarHBondContact O-N 3.36Å; D47-K49 VanDerWaalsContact OD1-CB 3.28Å; D47-K49 WeakPolarHBondContact OD1-CB 2.87Å; D47-K49 WeakPolarHBondContact OD1-CE 3.42Å; D47-K49 VanDerWaalsContact OD1-CG 3.3Å; D47-K49 WeakPolarHBondContact OD1-CG 2.97Å; D47-K49 PolarHBondContact OD1-N 2.85Å; D47-K49 IonicContact OD1-NZ 2.72Å; D47-K49 PolarHBondContact OD1-NZ 3.27Å; D47-K49 WeakPolarHBondContact OD2-CE 3.09Å; D47-K49 IonicContact OD2-NZ 2.63Å; D47-K49 PolarHBondContact OD2-NZ 3.39Å; K49-D51 VanDerWaalsContact C-N 3.33Å; K49-Y52 VanDerWaalsContact CA-CD2 3.44Å; K49-Y52 HydrophobicContact CB-CD2 3.89Å; K49-Y52 HydrophobicContact CB-CE2 4.29Å; K49-Y52 HydrophobicContact CG-CD2 3.56Å; K49-Y52 HydrophobicContact CG-CE2 3.55Å
50W81.7Confident76.7Confident184 Ų184127.4 Ų127.470%0.69762%0.622SS**G310 helixtrans-70.8-34.8169.9-74.943.8000111W46 D47 D48W46-W50 HydrophobicContact CE3-CD2 4.22Å; W46-W50 AromaticContact CE3-CE3 3.55Å; W46-W50 HydrophobicContact CE3-CE3 3.55Å; W46-W50 HydrophobicContact CE3-CH2 4.46Å; W46-W50 AromaticContact CE3-CZ3 3.71Å; W46-W50 HydrophobicContact CE3-CZ3 3.71Å; W46-W50 HydrophobicContact CH2-CZ3 4.32Å; W46-W50 AromaticContact CZ3-CE3 3.59Å; W46-W50 HydrophobicContact CZ3-CE3 3.59Å; W46-W50 HydrophobicContact CZ3-CH2 4.24Å; W46-W50 AromaticContact CZ3-CZ3 3.35Å; W46-W50 HydrophobicContact CZ3-CZ3 3.35Å; D47-W50 VanDerWaalsContact O-CB 3.29Å; D47-W50 WeakPolarHBondContact O-CB 3.28Å; D47-W50 PolarHBondContact O-N 3.03Å; D48-W50 PolarHBondContact O-N 2.99Å
51D75.8Confident77.1Confident142 Ų142121.8 Ų121.876%0.75959%0.594SS**THydrogen-bonded Turntrans-82.8-18.3175-80.3-3.7000112.6D48 K49 E53D48-D51 PolarHBondContact O-N 3.3Å; D48-D51 VanDerWaalsContact O-N 3.12Å; K49-D51 VanDerWaalsContact C-N 3.33Å; D51-E53 PolarHBondContact O-N 3.32Å
52Y79.3Confident77.5Confident146 Ų146121.6 Ų121.657%0.57358%0.584SS**SBendtrans-62.5115.1170.5-65.7-22000108.6D48 K49 V54D48-Y52 PolarHBondContact O-N 3.25Å; D48-Y52 VanDerWaalsContact O-N 3.09Å; K49-Y52 VanDerWaalsContact CA-CD2 3.44Å; K49-Y52 HydrophobicContact CB-CD2 3.89Å; K49-Y52 HydrophobicContact CB-CE2 4.29Å; K49-Y52 HydrophobicContact CG-CD2 3.56Å; K49-Y52 HydrophobicContact CG-CE2 3.55Å; Y52-V54 PolarHBondContact O-N 3.32Å
53E68.8Low78.1Confident188 Ų188125.3 Ų125.388%0.87959%0.594SS**  trans-6178.6157.9-62.6-165178.300107.5D51 E55D51-E53 PolarHBondContact O-N 3.32Å; E53-E55 PolarHBondContact O-N 3.09Å
54V70.6Confident78.5Confident112 Ų112123.2 Ų123.268%0.67958%0.583SS**  trans-57.5111.8161176.90000104.2Y52 I56Y52-V54 PolarHBondContact O-N 3.32Å; V54-I56 PolarHBondContact O-N 3.22Å; V54-I56 VanDerWaalsContact O-N 3.15Å
55E66.3Low78.9Confident168 Ų168122.6 Ų122.679%0.78557%0.574SS**  trans-48.3127.4-173.5-70.6-157.9-167.300109.3E53 D57E53-E55 PolarHBondContact O-N 3.09Å; E55-D57 PolarHBondContact O-N 2.99Å
56I64.8Low79.2Confident136 Ų136122.4 Ų122.470%0.69757%0.567SS**SBendtrans-67.522-172.8-62165.4000111.6V54 D58 T61V54-I56 PolarHBondContact O-N 3.22Å; V54-I56 VanDerWaalsContact O-N 3.15Å; I56-D58 VanDerWaalsContact C-N 3.31Å; I56-T61 HydrophobicContact CG2-CG2 3.96Å; I56-T61 WeakPolarHBondContact O-CB 3.47Å; I56-T61 VanDerWaalsContact O-CG2 3.23Å; I56-T61 WeakPolarHBondContact O-CG2 3.23Å; I56-T61 PolarHBondContact O-OG1 3.39Å
57D63.5Low79.4Confident106 Ų106118.1 Ų118.157%0.56755%0.554SS**  trans-97.431.3168.6-160.928.9000112.6E55 Q62E55-D57 PolarHBondContact O-N 2.99Å; D57-Q62 PolarHBondContact O-NE2 2.94Å; D57-Q62 WeakPolarHBondContact OD1-CG 3.34Å; D57-Q62 PolarHBondContact OD1-NE2 3.42Å
58D72.9Confident79.8Confident93 Ų93117.5 Ų117.550%0.49755%0.551SS.*SBendtrans-61149.8164.7-174.424.9000110.4I56 F60 T61 Q62I56-D58 VanDerWaalsContact C-N 3.31Å; D58-F60 PolarHBondContact O-N 2.88Å; D58-T61 WeakPolarHBondContact O-CB 3.09Å; D58-T61 PolarHBondContact O-N 2.89Å; D58-Q62 PolarHBondContact O-N 3.37Å
59Q84.7Confident80.3Confident129 Ų129115.8 Ų115.860%0.60354%0.543SS*.Hα-helixtrans-51.9-33-179.7-60.3-175.1-93.500111.7Q62 Y63Q59-Q62 PolarHBondContact O-N 3.14Å; Q59-Y63 HydrophobicContact CB-CE2 4.39Å; Q59-Y63 WeakPolarHBondContact O-CD2 3.29Å; Q59-Y63 PolarHBondContact O-N 2.98Å
60F84.2Confident80.7Confident140 Ų140117 Ų11761%0.61455%0.549SS*.Hα-helixtrans-59.1-47.3174179.4-103.6000112.6D58 Q62 Y63 L64D58-F60 PolarHBondContact O-N 2.88Å; F60-Q62 VanDerWaalsContact C-N 3.28Å; F60-Q62 PolarHBondContact O-N 2.86Å; F60-Y63 PolarHBondContact O-N 3.18Å; F60-L64 HydrophobicContact CE1-CD2 4.44Å; F60-L64 WeakPolarHBondContact O-CB 3.01Å; F60-L64 PolarHBondContact O-N 3.15Å
61T84.8Confident81Confident23 Ų23113.8 Ų113.814%0.14154%0.544CS..Hα-helixtrans-63.3-37.6177.7-50.40000111.1I56 D58 L64 R65I56-T61 HydrophobicContact CG2-CG2 3.96Å; I56-T61 WeakPolarHBondContact O-CB 3.47Å; I56-T61 VanDerWaalsContact O-CG2 3.23Å; I56-T61 WeakPolarHBondContact O-CG2 3.23Å; I56-T61 PolarHBondContact O-OG1 3.39Å; D58-T61 WeakPolarHBondContact O-CB 3.09Å; D58-T61 PolarHBondContact O-N 2.89Å; T61-L64 PolarHBondContact O-N 2.72Å; T61-R65 HydrophobicContact CG2-CG 4.39Å; T61-R65 WeakPolarHBondContact O-CB 3.39Å; T61-R65 VanDerWaalsContact O-CG 3.28Å; T61-R65 WeakPolarHBondContact O-CG 3.28Å; T61-R65 PolarHBondContact O-N 2.98Å
62Q87Confident81.4Confident81 Ų81109.3 Ų109.338%0.37953%0.532SS..Hα-helixtrans-63-46.4176.2-63.2179.241.800111.4D57 D58 Q59 F60 R65 Q66D57-Q62 PolarHBondContact O-NE2 2.94Å; D57-Q62 WeakPolarHBondContact OD1-CG 3.34Å; D57-Q62 PolarHBondContact OD1-NE2 3.42Å; D58-Q62 PolarHBondContact O-N 3.37Å; Q59-Q62 PolarHBondContact O-N 3.14Å; F60-Q62 VanDerWaalsContact C-N 3.28Å; F60-Q62 PolarHBondContact O-N 2.86Å; Q62-R65 PolarHBondContact O-N 3.12Å; Q62-Q66 VanDerWaalsContact O-CG 3.3Å; Q62-Q66 WeakPolarHBondContact O-CG 3.19Å; Q62-Q66 PolarHBondContact O-N 2.71Å
63Y88.9Confident81.6Confident148 Ų148108.9 Ų108.958%0.5854%0.535SS*.Hα-helixtrans-61.9-43.3174.6-73.9-58.5000112.1Q59 F60 R65 Q66 E67Q59-Y63 HydrophobicContact CB-CE2 4.39Å; Q59-Y63 WeakPolarHBondContact O-CD2 3.29Å; Q59-Y63 PolarHBondContact O-N 2.98Å; F60-Y63 PolarHBondContact O-N 3.18Å; Y63-R65 PolarHBondContact O-N 2.79Å; Y63-Q66 WeakPolarHBondContact O-CB 3.3Å; Y63-Q66 PolarHBondContact O-N 3.01Å; Y63-E67 PolarHBondContact O-N 2.72Å
64L87.9Confident81.9Confident82 Ų82103 Ų10343%0.42951%0.509SS..Hα-helixtrans-60.7-44.7177.1-179.660.7000111.6F60 T61 Q66 E67 L68F60-L64 HydrophobicContact CE1-CD2 4.44Å; F60-L64 WeakPolarHBondContact O-CB 3.01Å; F60-L64 PolarHBondContact O-N 3.15Å; T61-L64 PolarHBondContact O-N 2.72Å; L64-Q66 PolarHBondContact O-N 2.63Å; L64-E67 PolarHBondContact O-N 2.98Å; L64-L68 HydrophobicContact CD1-CD1 4.24Å; L64-L68 HydrophobicContact CD1-CG 4.28Å; L64-L68 HydrophobicContact CG-CD1 4.12Å; L64-L68 WeakPolarHBondContact O-CB 3.25Å; L64-L68 WeakPolarHBondContact O-CG 3.29Å; L64-L68 PolarHBondContact O-N 3.09Å
65R86.4Confident81.8Confident134 Ų134105.5 Ų105.551%0.50651%0.513SS..Hα-helixtrans-59.9-45.1175.1-75.2175.7-176.3-81.50.7111.3T61 Q62 Y63 E67 L68 T69T61-R65 HydrophobicContact CG2-CG 4.39Å; T61-R65 WeakPolarHBondContact O-CB 3.39Å; T61-R65 VanDerWaalsContact O-CG 3.28Å; T61-R65 WeakPolarHBondContact O-CG 3.28Å; T61-R65 PolarHBondContact O-N 2.98Å; Q62-R65 PolarHBondContact O-N 3.12Å; Y63-R65 PolarHBondContact O-N 2.79Å; R65-E67 PolarHBondContact O-N 3.44Å; R65-L68 PolarHBondContact O-N 3.12Å; R65-T69 WeakPolarHBondContact O-CB 3.41Å; R65-T69 PolarHBondContact O-N 3.46Å; R65-T69 PolarHBondContact O-OG1 3.33Å
66Q89.5Confident81.7Confident99 Ų99105.7 Ų105.746%0.46351%0.514SS..Hα-helixtrans-59.8-45.2177.5-72.1171.68.500112.1Q62 Y63 L64 T69 K70Q62-Q66 VanDerWaalsContact O-CG 3.3Å; Q62-Q66 WeakPolarHBondContact O-CG 3.19Å; Q62-Q66 PolarHBondContact O-N 2.71Å; Y63-Q66 WeakPolarHBondContact O-CB 3.3Å; Y63-Q66 PolarHBondContact O-N 3.01Å; L64-Q66 PolarHBondContact O-N 2.63Å; Q66-T69 PolarHBondContact O-N 3.4Å; Q66-K70 WeakPolarHBondContact O-CG 3.48Å; Q66-K70 PolarHBondContact O-N 3.42Å
67E89.9Confident81.3Confident92 Ų92105.7 Ų105.743%0.4352%0.52SS..Hα-helixtrans-65.2-42.7177.3-71.1-54.5126.400112.1Y63 L64 R65 T69 K70 L71Y63-E67 PolarHBondContact O-N 2.72Å; L64-E67 PolarHBondContact O-N 2.98Å; R65-E67 PolarHBondContact O-N 3.44Å; E67-T69 VanDerWaalsContact C-N 3.34Å; E67-T69 PolarHBondContact O-N 3.35Å; E67-K70 WeakPolarHBondContact O-CB 3.37Å; E67-K70 PolarHBondContact O-N 2.91Å; E67-K70 IonicContact OE1-NZ 2.67Å; E67-K70 PolarHBondContact OE1-NZ 3.41Å; E67-L71 WeakPolarHBondContact O-CG 3.46Å; E67-L71 PolarHBondContact O-N 3.43Å
68L89.8Confident80.3Confident57 Ų57111.5 Ų111.530%0.29855%0.552SS.*Hα-helixtrans-65.7-35176.1-70.6175.7000112.8L64 R65 L71 G72 H73 L74L64-L68 HydrophobicContact CD1-CD1 4.24Å; L64-L68 HydrophobicContact CD1-CG 4.28Å; L64-L68 HydrophobicContact CG-CD1 4.12Å; L64-L68 WeakPolarHBondContact O-CB 3.25Å; L64-L68 WeakPolarHBondContact O-CG 3.29Å; L64-L68 PolarHBondContact O-N 3.09Å; R65-L68 PolarHBondContact O-N 3.12Å; L68-L71 PolarHBondContact O-N 3.18Å; L68-G72 PolarHBondContact O-N 2.88Å; L68-G72 VanDerWaalsContact O-N 3.17Å; L68-H73 HydrophobicContact CB-CB 4.42Å; L68-H73 HydrophobicContact CD2-CB 4.25Å; L68-H73 PolarHBondContact O-N 2.84Å; L68-L74 HydrophobicContact CB-CD1 3.7Å; L68-L74 HydrophobicContact CD1-CD1 3.83Å; L68-L74 HydrophobicContact CG-CD1 4.44Å
69T89.4Confident80.7Confident49 Ų49112.5 Ų112.530%0.30155%0.554SS.*Hα-helixtrans-65-43.1171.6-61.50000111R65 Q66 E67 L71 G72 E76R65-T69 WeakPolarHBondContact O-CB 3.41Å; R65-T69 PolarHBondContact O-N 3.46Å; R65-T69 PolarHBondContact O-OG1 3.33Å; Q66-T69 PolarHBondContact O-N 3.4Å; E67-T69 VanDerWaalsContact C-N 3.34Å; E67-T69 PolarHBondContact O-N 3.35Å; T69-L71 VanDerWaalsContact C-N 3.27Å; T69-L71 PolarHBondContact O-N 3.25Å; T69-G72 PolarHBondContact O-N 3.05Å; T69-E76 HydrophobicContact CG2-CG 4.15Å
70K88Confident80.5Confident149 Ų149111.6 Ų111.665%0.64855%0.552SS**Hα-helixtrans-59.3-38174.6-72.4172.7-171.9170.10112.5Q66 E67 G72Q66-K70 WeakPolarHBondContact O-CG 3.48Å; Q66-K70 PolarHBondContact O-N 3.42Å; E67-K70 WeakPolarHBondContact O-CB 3.37Å; E67-K70 PolarHBondContact O-N 2.91Å; E67-K70 IonicContact OE1-NZ 2.67Å; E67-K70 PolarHBondContact OE1-NZ 3.41Å; K70-G72 PolarHBondContact O-N 3.29Å
71L89.3Confident80.3Confident115 Ų115110 Ų11060%0.60255%0.548SS*.THydrogen-bonded Turntrans-77.4-4.8176.5-65.7172.7000113.2E67 L68 T69 H73E67-L71 WeakPolarHBondContact O-CG 3.46Å; E67-L71 PolarHBondContact O-N 3.43Å; L68-L71 PolarHBondContact O-N 3.18Å; T69-L71 VanDerWaalsContact C-N 3.27Å; T69-L71 PolarHBondContact O-N 3.25Å; L71-H73 VanDerWaalsContact C-N 3.3Å; L71-H73 PolarHBondContact O-N 3.32Å
72G83Confident80Confident48 Ų48115.1 Ų115.150%0.49557%0.572SS.*THydrogen-bonded Turntrans75.114.9179.900000114.3L68 T69 K70L68-G72 PolarHBondContact O-N 2.88Å; L68-G72 VanDerWaalsContact O-N 3.17Å; T69-G72 PolarHBondContact O-N 3.05Å; K70-G72 PolarHBondContact O-N 3.29Å
73H82.9Confident79.5Confident137 Ų137117.3 Ų117.363%0.63458%0.584SS**SBendtrans-82.6-21178.2-65.8-43000113.1L68 L71L68-H73 HydrophobicContact CB-CB 4.42Å; L68-H73 HydrophobicContact CD2-CB 4.25Å; L68-H73 PolarHBondContact O-N 2.84Å; L71-H73 VanDerWaalsContact C-N 3.3Å; L71-H73 PolarHBondContact O-N 3.32Å
74L76.1Confident78.9Confident65 Ų65115.2 Ų115.234%0.3459%0.585SS.*SBendtrans-120.2119.6175.7-94.2151.4000109.3L68L68-L74 HydrophobicContact CB-CD1 3.7Å; L68-L74 HydrophobicContact CD1-CD1 3.83Å; L68-L74 HydrophobicContact CG-CD1 4.44Å
75H68.7Low78.3Confident165 Ų165117.6 Ų117.676%0.76460%0.596SS**  trans-82.8126.3171.1-74.4-129.1000108.3T77H75-T77 PolarHBondContact O-N 3.04Å
76E63.7Low77.7Confident171 Ų171116.3 Ų116.380%0.79960%0.603SS**  trans-57.9107.6171.7-66.6175.7-178.900109T69 N78T69-E76 HydrophobicContact CG2-CG 4.15Å; E76-N78 PolarHBondContact O-N 2.83Å
77T57.5Low76.7Confident136 Ų136117.8 Ų117.883%0.83461%0.614SS**  trans-78.3102.2168.354.20000107.4H75H75-T77 PolarHBondContact O-N 3.04Å
78N41.6Very low75.5Confident229 Ų229120.1 Ų120.1100%1.22563%0.631SS**  trans-50.50171-177.228000112.3E76E76-N78 PolarHBondContact O-N 2.83Å

Retrieved 78 of 78 residues in 83.1 ms (Link to these results)