C4QQL6_SCHMA Loading...

Retrotransposon Pao-like RNAseH-like domain-containing protein

AlphaFold DB , UniProt , Accession C4QQL6, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 74 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M59.8Low77.9Confident149 Ų14988.3 Ų88.373%0.73447%0.465SS*.  0126.30-153.8149.497.200108.5D5 K6 M9M1-D5 HydrophobicContact CG-CB 3.7Å; M1-K6 HydrophobicContact CE-CG 3.94Å; M1-M9 HydrophobicContact CE-CE 3.06Å; M1-M9 HydrophobicContact CE-SD 3.55Å; M1-M9 VanDerWaalsContact CE-SD 3.55Å; M1-M9 HydrophobicContact SD-SD 4.45Å
2S83.3Confident78.2Confident52 Ų5283.9 Ų83.936%0.36445%0.445SS..  trans-67156.9-174.397.80000110.5C4 D5 K6S2-C4 PolarHBondContact O-N 3.01Å; S2-C4 WeakPolarHBondContact OG-CB 3.49Å; S2-C4 PolarHBondContact OG-N 3.25Å; S2-C4 VanDerWaalsContact OG-N 3.16Å; S2-D5 PolarHBondContact N-OD2 2.85Å; S2-D5 PolarHBondContact O-N 3.16Å; S2-D5 PolarHBondContact OG-N 2.75Å; S2-D5 PolarHBondContact OG-OD1 3.32Å; S2-D5 PolarHBondContact OG-OD2 3.29Å; S2-K6 PolarHBondContact O-N 2.85Å
3L81.4Confident78.6Confident144 Ų14487.9 Ų87.975%0.75447%0.467SS*.Hα-helixtrans-58.2-37173.5-164.4102.6000110.5K6 T7L3-K6 PolarHBondContact O-N 3.2Å; L3-T7 PolarHBondContact O-N 3.46Å; L3-T7 VanDerWaalsContact O-N 3.12Å; L3-T7 PolarHBondContact O-OG1 3.12Å
4C73Confident79Confident80 Ų8093.3 Ų93.354%0.54148%0.484SS..Hα-helixtrans-62.7-44.2178.3-1490000111.4S2 K6 T7 I8S2-C4 PolarHBondContact O-N 3.01Å; S2-C4 WeakPolarHBondContact OG-CB 3.49Å; S2-C4 PolarHBondContact OG-N 3.25Å; S2-C4 VanDerWaalsContact OG-N 3.16Å; C4-K6 VanDerWaalsContact C-N 3.28Å; C4-K6 PolarHBondContact O-N 3.37Å; C4-T7 PolarHBondContact O-N 3.16Å; C4-I8 WeakPolarHBondContact O-CD1 3.44Å; C4-I8 VanDerWaalsContact O-CG1 3.23Å; C4-I8 WeakPolarHBondContact O-CG1 2.97Å; C4-I8 PolarHBondContact O-N 2.89Å
5D75.4Confident79.2Confident71 Ų7194.9 Ų94.938%0.3849%0.488SS..Hα-helixtrans-60.7-41.1179.9-50.9-8.6000110.6M1 S2 I8 M9M1-D5 HydrophobicContact CG-CB 3.7Å; S2-D5 PolarHBondContact N-OD2 2.85Å; S2-D5 PolarHBondContact O-N 3.16Å; S2-D5 PolarHBondContact OG-N 2.75Å; S2-D5 PolarHBondContact OG-OD1 3.32Å; S2-D5 PolarHBondContact OG-OD2 3.29Å; D5-I8 PolarHBondContact O-N 2.79Å; D5-M9 WeakPolarHBondContact O-CG 3.27Å; D5-M9 PolarHBondContact O-N 3.07Å
6K81.3Confident79.2Confident106 Ų10692.1 Ų92.146%0.46148%0.477SS..Hα-helixtrans-63-47.5177-66.4178.9-178.4-177.40111.5M1 S2 L3 C4 I8 M9 E10M1-K6 HydrophobicContact CE-CG 3.94Å; S2-K6 PolarHBondContact O-N 2.85Å; L3-K6 PolarHBondContact O-N 3.2Å; C4-K6 VanDerWaalsContact C-N 3.28Å; C4-K6 PolarHBondContact O-N 3.37Å; K6-I8 VanDerWaalsContact C-N 3.31Å; K6-I8 PolarHBondContact O-N 3.38Å; K6-M9 PolarHBondContact O-N 2.83Å; K6-E10 WeakPolarHBondContact O-CG 3.49Å; K6-E10 PolarHBondContact O-N 2.84Å
7T80.9Confident79.4Confident63 Ų6389.2 Ų89.239%0.38747%0.469SS..Hα-helixtrans-61.7-41.2178.2-48.40000111.6L3 C4 E10 I11L3-T7 PolarHBondContact O-N 3.46Å; L3-T7 VanDerWaalsContact O-N 3.12Å; L3-T7 PolarHBondContact O-OG1 3.12Å; C4-T7 PolarHBondContact O-N 3.16Å; T7-E10 PolarHBondContact O-N 3.1Å; T7-I11 HydrophobicContact CG2-CD1 4.04Å; T7-I11 VanDerWaalsContact O-CG1 3.27Å; T7-I11 WeakPolarHBondContact O-CG1 3.47Å; T7-I11 PolarHBondContact O-N 3.35Å
8I76.6Confident79.6Confident58 Ų5890.2 Ų90.230%0.29748%0.475SS..Hα-helixtrans-60-49.6176.2-69.3163.7000109.8C4 D5 K6 E10 I11 T12 P28C4-I8 WeakPolarHBondContact O-CD1 3.44Å; C4-I8 VanDerWaalsContact O-CG1 3.23Å; C4-I8 WeakPolarHBondContact O-CG1 2.97Å; C4-I8 PolarHBondContact O-N 2.89Å; D5-I8 PolarHBondContact O-N 2.79Å; K6-I8 VanDerWaalsContact C-N 3.31Å; K6-I8 PolarHBondContact O-N 3.38Å; I8-E10 PolarHBondContact O-N 3.04Å; I8-I11 PolarHBondContact O-N 3Å; I8-T12 WeakPolarHBondContact O-CB 3.14Å; I8-T12 PolarHBondContact O-N 3.21Å; I8-T12 PolarHBondContact O-OG1 2.59Å; I8-T12 VanDerWaalsContact O-OG1 3.07Å; I8-P28 HydrophobicContact CB-CB 4.21Å; I8-P28 HydrophobicContact CG1-CB 3.87Å; I8-P28 HydrophobicContact CG1-CG 4.17Å; I8-P28 HydrophobicContact CG2-CB 3.91Å; I8-P28 HydrophobicContact CG2-CG 3.91Å
9M78.4Confident79.6Confident92 Ų9289.5 Ų89.545%0.45347%0.471SS..Hα-helixtrans-61.2-43.4178.2-70-172.2-28.200112.3M1 D5 K6 I11 T12 D13M1-M9 HydrophobicContact CE-CE 3.06Å; M1-M9 HydrophobicContact CE-SD 3.55Å; M1-M9 VanDerWaalsContact CE-SD 3.55Å; M1-M9 HydrophobicContact SD-SD 4.45Å; D5-M9 WeakPolarHBondContact O-CG 3.27Å; D5-M9 PolarHBondContact O-N 3.07Å; K6-M9 PolarHBondContact O-N 2.83Å; M9-I11 VanDerWaalsContact C-N 3.29Å; M9-I11 PolarHBondContact O-N 3.07Å; M9-T12 PolarHBondContact O-N 3.31Å; M9-D13 WeakPolarHBondContact O-CB 3.33Å; M9-D13 PolarHBondContact O-N 2.96Å
10E84.8Confident79.7Confident111 Ų11193.2 Ų93.252%0.51949%0.491SS..Hα-helixtrans-61-38.5177.6-74.9179.3-16000112.4K6 T7 I8 K14K6-E10 WeakPolarHBondContact O-CG 3.49Å; K6-E10 PolarHBondContact O-N 2.84Å; T7-E10 PolarHBondContact O-N 3.1Å; I8-E10 PolarHBondContact O-N 3.04Å; E10-K14 WeakPolarHBondContact O-CB 3.26Å; E10-K14 WeakPolarHBondContact O-CD 3.49Å; E10-K14 WeakPolarHBondContact O-CG 3.4Å; E10-K14 PolarHBondContact O-N 3.48Å
11I82.4Confident79.7Confident45 Ų4592.3 Ų92.323%0.23151%0.505CS..Hα-helixtrans-68-46.3175.4-68.2165.4000109.9T7 I8 M9 K14 Q15 P26T7-I11 HydrophobicContact CG2-CD1 4.04Å; T7-I11 VanDerWaalsContact O-CG1 3.27Å; T7-I11 WeakPolarHBondContact O-CG1 3.47Å; T7-I11 PolarHBondContact O-N 3.35Å; I8-I11 PolarHBondContact O-N 3Å; M9-I11 VanDerWaalsContact C-N 3.29Å; M9-I11 PolarHBondContact O-N 3.07Å; I11-K14 PolarHBondContact O-N 3.19Å; I11-Q15 WeakPolarHBondContact O-CG 3.49Å; I11-Q15 PolarHBondContact O-N 3.37Å; I11-P26 HydrophobicContact CG2-CB 4.11Å; I11-P26 HydrophobicContact CG2-CG 3.74Å
12T81.5Confident80.5Confident36 Ų3689.9 Ų89.922%0.22149%0.491CS..Hα-helixtrans-58.6-51.2178.2-67.90000111.4I8 M9 K14 Q15 T16 V25I8-T12 WeakPolarHBondContact O-CB 3.14Å; I8-T12 PolarHBondContact O-N 3.21Å; I8-T12 PolarHBondContact O-OG1 2.59Å; I8-T12 VanDerWaalsContact O-OG1 3.07Å; M9-T12 PolarHBondContact O-N 3.31Å; T12-K14 VanDerWaalsContact C-N 3.32Å; T12-K14 PolarHBondContact O-N 3.05Å; T12-Q15 PolarHBondContact O-N 3.21Å; T12-T16 WeakPolarHBondContact CG2-OG1 3.3Å; T12-T16 WeakPolarHBondContact O-CB 3.44Å; T12-T16 PolarHBondContact O-N 3.12Å; T12-T16 PolarHBondContact O-OG1 3.43Å; T12-V25 HydrophobicContact CG2-CG1 3.94Å
13D82.8Confident80.2Confident136 Ų13695.5 Ų95.573%0.72751%0.506SS*.Hα-helixtrans-62.5-39.1179.7-82.7-2.6000112.2M9M9-D13 WeakPolarHBondContact O-CB 3.33Å; M9-D13 PolarHBondContact O-N 2.96Å
14K84.5Confident80.1Confident163 Ų16393.8 Ų93.871%0.70949%0.494SS*.Hα-helixtrans-70.7-33.8-179.3-75.5172.5-175165.50113.6E10 I11 T12E10-K14 WeakPolarHBondContact O-CB 3.26Å; E10-K14 WeakPolarHBondContact O-CD 3.49Å; E10-K14 WeakPolarHBondContact O-CG 3.4Å; E10-K14 PolarHBondContact O-N 3.48Å; I11-K14 PolarHBondContact O-N 3.19Å; T12-K14 VanDerWaalsContact C-N 3.32Å; T12-K14 PolarHBondContact O-N 3.05Å
15Q82Confident80.3Confident118 Ų11893.8 Ų93.855%0.55149%0.491SS*.Hα-helixtrans-114.4-5.3-170.2-48.3178.2-500113.6I11 T12 A17 P26I11-Q15 WeakPolarHBondContact O-CG 3.49Å; I11-Q15 PolarHBondContact O-N 3.37Å; T12-Q15 PolarHBondContact O-N 3.21Å; Q15-A17 PolarHBondContact O-N 2.92Å; Q15-A17 VanDerWaalsContact O-N 3.16Å; Q15-P26 HydrophobicContact CB-CB 3.79Å; Q15-P26 HydrophobicContact CB-CG 3.67Å; Q15-P26 HydrophobicContact CG-CB 4.36Å; Q15-P26 HydrophobicContact CG-CG 4.35Å
16T79.7Confident80Confident50 Ų5091.3 Ų91.331%0.30748%0.479SS..  trans-67.7113.9174.1-62.90000109.4T12 Y23 Q24 V25T12-T16 WeakPolarHBondContact CG2-OG1 3.3Å; T12-T16 WeakPolarHBondContact O-CB 3.44Å; T12-T16 PolarHBondContact O-N 3.12Å; T12-T16 PolarHBondContact O-OG1 3.43Å; T16-Y23 HydrophobicContact CG2-CD1 3.99Å; T16-Q24 VanDerWaalsContact CA-O 3.27Å; T16-Q24 WeakPolarHBondContact CA-O 3.38Å; T16-V25 HydrophobicContact CG2-CG2 4.19Å
17A82.1Confident79.6Confident42 Ų4290.7 Ų90.735%0.34748%0.479SS..EExtended strand (participates in β ladder)trans-121.6138.5177.500000109.7Q15 L19 Q24Q15-A17 PolarHBondContact O-N 2.92Å; Q15-A17 VanDerWaalsContact O-N 3.16Å; A17-L19 HydrophobicContact CB-CG 4.25Å; A17-L19 PolarHBondContact O-N 3.21Å; A17-Q24 PolarHBondContact N-O 3.25Å; A17-Q24 VanDerWaalsContact N-O 3.12Å; A17-Q24 PolarHBondContact O-N 2.86Å
18L83.1Confident78.9Confident107 Ų10789.3 Ų89.356%0.5647%0.471SS*.EExtended strand (participates in β ladder)trans-83.6108.5168.8-176.372.5000107.9H22 Y23L18-H22 WeakPolarHBondContact CA-O 3.43Å; L18-Y23 HydrophobicContact CB-CD1 4.24Å; L18-Y23 HydrophobicContact CB-CE1 4.09Å; L18-Y23 HydrophobicContact CD1-CD1 4.02Å; L18-Y23 HydrophobicContact CD1-CD2 4.02Å; L18-Y23 HydrophobicContact CD1-CE1 3.92Å; L18-Y23 HydrophobicContact CD1-CE2 3.91Å; L18-Y23 HydrophobicContact CD1-CG 4.07Å
19L79.7Confident78.6Confident78 Ų7892.9 Ų92.941%0.40848%0.481SS..EExtended strand (participates in β ladder)trans-118.6133178.3-65.7172.5000108.1A17 G21 H22 Q24A17-L19 HydrophobicContact CB-CG 4.25Å; A17-L19 PolarHBondContact O-N 3.21Å; L19-G21 PolarHBondContact O-N 3.24Å; L19-H22 PolarHBondContact N-O 3.37Å; L19-H22 PolarHBondContact O-CE1 3.37Å; L19-H22 VanDerWaalsContact O-CG 3.32Å; L19-H22 PolarHBondContact O-N 3.01Å; L19-H22 PolarHBondContact O-ND1 3.45Å; L19-Q24 HydrophobicContact CD1-CB 4.36Å; L19-Q24 VanDerWaalsContact CD1-OE1 3.27Å
20D80.4Confident77.7Confident162 Ų16298.6 Ų98.687%0.86650%0.503SS*.THydrogen-bonded Turntrans43.146.7174.1-60.1-25.8000114.5H22D20-H22 VanDerWaalsContact C-N 3.29Å; D20-H22 PolarHBondContact O-N 3.07Å; D20-H22 PolarHBondContact O-ND1 2.98Å
21G81.6Confident76.3Confident76 Ų7695.2 Ų95.278%0.78449%0.49SS*.THydrogen-bonded Turntrans74.67.3178.200000116.1L19L19-G21 PolarHBondContact O-N 3.24Å
22H75.5Confident75.1Confident97 Ų9798.9 Ų98.945%0.44951%0.51SS..EExtended strand (participates in β ladder)trans-129.8147.4176.765.3-82.4000112.5L18 L19 D20L18-H22 WeakPolarHBondContact CA-O 3.43Å; L19-H22 PolarHBondContact N-O 3.37Å; L19-H22 PolarHBondContact O-CE1 3.37Å; L19-H22 VanDerWaalsContact O-CG 3.32Å; L19-H22 PolarHBondContact O-N 3.01Å; L19-H22 PolarHBondContact O-ND1 3.45Å; D20-H22 VanDerWaalsContact C-N 3.29Å; D20-H22 PolarHBondContact O-N 3.07Å; D20-H22 PolarHBondContact O-ND1 2.98Å
23Y76.2Confident73.9Confident170 Ų170104 Ų10467%0.66753%0.526SS*.EExtended strand (participates in β ladder)trans-82.3119.7175.5-71.6-80.3000109.8T16 L18T16-Y23 HydrophobicContact CG2-CD1 3.99Å; L18-Y23 HydrophobicContact CB-CD1 4.24Å; L18-Y23 HydrophobicContact CB-CE1 4.09Å; L18-Y23 HydrophobicContact CD1-CD1 4.02Å; L18-Y23 HydrophobicContact CD1-CD2 4.02Å; L18-Y23 HydrophobicContact CD1-CE1 3.92Å; L18-Y23 HydrophobicContact CD1-CE2 3.91Å; L18-Y23 HydrophobicContact CD1-CG 4.07Å
24Q79.2Confident72.9Confident108 Ų108105.1 Ų105.151%0.50553%0.532SS..EExtended strand (participates in β ladder)trans-94111.4170-177170.3-28.200108.4T16 A17 L19T16-Q24 VanDerWaalsContact CA-O 3.27Å; T16-Q24 WeakPolarHBondContact CA-O 3.38Å; A17-Q24 PolarHBondContact N-O 3.25Å; A17-Q24 VanDerWaalsContact N-O 3.12Å; A17-Q24 PolarHBondContact O-N 2.86Å; L19-Q24 HydrophobicContact CD1-CB 4.36Å; L19-Q24 VanDerWaalsContact CD1-OE1 3.27Å
25V77.5Confident71.6Confident80 Ų80101.7 Ų101.749%0.48553%0.528SS..PPolyproline II helixtrans-99.8136.5176.7-178.50000108.7T12 T16T12-V25 HydrophobicContact CG2-CG1 3.94Å; T16-V25 HydrophobicContact CG2-CG2 4.19Å
26P69.8Low70.2Confident19 Ų1997.9 Ų97.912%0.12351%0.511CS..PPolyproline II helixtrans-68.2149.3176.334.8-44.3000112.2I11 Q15 P28I11-P26 HydrophobicContact CG2-CB 4.11Å; I11-P26 HydrophobicContact CG2-CG 3.74Å; Q15-P26 HydrophobicContact CB-CB 3.79Å; Q15-P26 HydrophobicContact CB-CG 3.67Å; Q15-P26 HydrophobicContact CG-CB 4.36Å; Q15-P26 HydrophobicContact CG-CG 4.35Å; P26-P28 WeakPolarHBondContact O-CD 3.37Å
27M72.1Confident69Low94 Ų9499.7 Ų99.746%0.46352%0.524SS..PPolyproline II helixtrans-73.2117.3165.4-65.9-63.2-67.800108W29 I45M27-W29 HydrophobicContact CE-CZ2 3.47Å; M27-W29 VanDerWaalsContact CE-CZ2 3.47Å; M27-W29 VanDerWaalsContact CE-NE1 3.34Å; M27-W29 PolarHBondContact O-N 3.24Å; M27-I45 HydrophobicContact CE-CG2 4.28Å
28P66.9Low67.7Low34 Ų34109.1 Ų109.122%0.22155%0.55CS.*SBendtrans-75.9-18-170.927.9-30.8000112.4I8 P26I8-P28 HydrophobicContact CB-CB 4.21Å; I8-P28 HydrophobicContact CG1-CB 3.87Å; I8-P28 HydrophobicContact CG1-CG 4.17Å; I8-P28 HydrophobicContact CG2-CB 3.91Å; I8-P28 HydrophobicContact CG2-CG 3.91Å; P26-P28 WeakPolarHBondContact O-CD 3.37Å
29W69.5Low66.3Low133 Ų133108.5 Ų108.550%0.50456%0.555SS.*  trans-99.7110.5171.549.481.9000110.3M27 V31M27-W29 HydrophobicContact CE-CZ2 3.47Å; M27-W29 VanDerWaalsContact CE-CZ2 3.47Å; M27-W29 VanDerWaalsContact CE-NE1 3.34Å; M27-W29 PolarHBondContact O-N 3.24Å; W29-V31 HydrophobicContact CB-CG1 3.94Å; W29-V31 HydrophobicContact CG-CG1 3.95Å; W29-V31 PolarHBondContact O-N 3.33Å
30K60.9Low65.2Low211 Ų211112.1 Ų112.192%0.91756%0.563SS**  trans-7082.6146.9-77.9-172.9178.1-176.80106D32K30-D32 PolarHBondContact O-N 3.35Å
31V54.4Low63.9Low40 Ų40105.1 Ų105.124%0.24253%0.527CS..  trans-65.3125.8170.9-830000108.1W29 W33 L36W29-V31 HydrophobicContact CB-CG1 3.94Å; W29-V31 HydrophobicContact CG-CG1 3.95Å; W29-V31 PolarHBondContact O-N 3.33Å; V31-W33 PolarHBondContact O-N 3.27Å; V31-L36 HydrophobicContact CB-CD1 3.46Å; V31-L36 VanDerWaalsContact CB-CD1 3.46Å; V31-L36 HydrophobicContact CG1-CD1 3.8Å; V31-L36 HydrophobicContact CG2-CD1 3.66Å
32D56.9Low62.6Low123 Ų123104.3 Ų104.366%0.65851%0.509SS*.  trans-61.4110.6159.9-84.3-40.5000106.8K30 D34 S35K30-D32 PolarHBondContact O-N 3.35Å; D32-D34 PolarHBondContact O-N 3.34Å; D32-S35 PolarHBondContact O-N 3.44Å; D32-S35 PolarHBondContact O-OG 3.28Å
33W56.8Low61.5Low144 Ų144105.9 Ų105.955%0.54552%0.515SS..THydrogen-bonded Turntrans-57.2-23.4-177.9-67.8102.3000112.5V31 S35 I45V31-W33 PolarHBondContact O-N 3.27Å; W33-S35 VanDerWaalsContact C-N 3.26Å; W33-S35 PolarHBondContact O-N 3.05Å; W33-I45 HydrophobicContact CH2-CB 4.45Å; W33-I45 HydrophobicContact CH2-CD1 4.21Å; W33-I45 HydrophobicContact CH2-CG2 4.18Å; W33-I45 HydrophobicContact CZ3-CD1 4.24Å
34D61.2Low60.6Low159 Ų159100.7 Ų100.785%0.8550%0.498SS*.THydrogen-bonded Turntrans-68.4-24.3176.7-60.6-40.4000113D32D32-D34 PolarHBondContact O-N 3.34Å
35S58Low59.6Low91 Ų9197.5 Ų97.564%0.63648%0.484SS*.THydrogen-bonded Turntrans-88.3-18.4-178.370.50000114.2D32 W33D32-S35 PolarHBondContact O-N 3.44Å; D32-S35 PolarHBondContact O-OG 3.28Å; W33-S35 VanDerWaalsContact C-N 3.26Å; W33-S35 PolarHBondContact O-N 3.05Å
36L53Low58.4Low37 Ų3796.5 Ų96.519%0.19448%0.48CS..SBendtrans-81.1141.1174.5-75.7113000109.9V31 R38 C41V31-L36 HydrophobicContact CB-CD1 3.46Å; V31-L36 VanDerWaalsContact CB-CD1 3.46Å; V31-L36 HydrophobicContact CG1-CD1 3.8Å; V31-L36 HydrophobicContact CG2-CD1 3.66Å; L36-R38 PolarHBondContact O-N 2.88Å; L36-C41 HydrophobicContact CD2-CB 3.54Å
37P54.6Low58Low88 Ų88101 Ų10157%0.57150%0.498SS*.  trans-54.4114.1170.821.6-30.4000108.4S39P37-S39 PolarHBondContact O-N 2.92Å
38R54.1Low57.4Low241 Ų241100.2 Ų100.291%0.90950%0.502SS*.THydrogen-bonded Turntrans-54.7-2.3-160.7-168.4169.7179.8162.41.7116.2L36L36-R38 PolarHBondContact O-N 2.88Å
39S54.7Low57.1Low94 Ų94109.1 Ų109.166%0.65753%0.531SS*.THydrogen-bonded Turntrans-121.8-5.7-163.253.90000117.8P37P37-S39 PolarHBondContact O-N 2.92Å
40R55.7Low56.7Low154 Ų154108.3 Ų108.358%0.58154%0.535SS*.THydrogen-bonded Turntrans-134.4-40.4-177.3-80.4-179.7-82.1-1712.7117.7I44 L72R40-I44 WeakPolarHBondContact O-CD1 3.46Å; R40-L72 HydrophobicContact CB-CD1 4.32Å
41C53.1Low56.8Low15 Ų15101.7 Ų101.710%0.10152%0.52CS..Hα-helixtrans-72.6-34.1-172.3-62.80000114.4L36 F43 I44 I45 L72L36-C41 HydrophobicContact CD2-CB 3.54Å; C41-F43 VanDerWaalsContact C-N 3.27Å; C41-F43 PolarHBondContact O-N 3.38Å; C41-I44 PolarHBondContact O-N 2.9Å; C41-I44 VanDerWaalsContact O-N 3.08Å; C41-I45 HydrophobicContact CB-CD1 4.4Å; C41-I45 WeakPolarHBondContact O-CG1 3.39Å; C41-I45 PolarHBondContact O-N 2.92Å; C41-L72 WeakPolarHBondContact SG-CD1 3.17Å
42S54Low57.5Low59 Ų59103.6 Ų103.641%0.41353%0.533SS..Hα-helixtrans-59.5-37.2-17855.40000112.7S46S42-S46 VanDerWaalsContact O-CB 3.31Å; S42-S46 WeakPolarHBondContact O-CB 3.27Å; S42-S46 PolarHBondContact O-N 2.9Å; S42-S46 PolarHBondContact O-OG 3.08Å
43F53.1Low58.4Low129 Ų129106.2 Ų106.257%0.56655%0.546SS*.Hα-helixtrans-68.4-35.5176-176.9-101000112.9C41 S46 K47C41-F43 VanDerWaalsContact C-N 3.27Å; C41-F43 PolarHBondContact O-N 3.38Å; F43-S46 WeakPolarHBondContact CA-OG 3.34Å; F43-S46 PolarHBondContact O-OG 3.18Å; F43-K47 HydrophobicContact CE1-CG 4.25Å; F43-K47 VanDerWaalsContact CZ-CE 3.46Å; F43-K47 HydrophobicContact CZ-CG 4.4Å; F43-K47 VanDerWaalsContact O-CG 3.22Å; F43-K47 WeakPolarHBondContact O-CG 3.34Å; F43-K47 PolarHBondContact O-N 3.32Å; F43-K47 VanDerWaalsContact O-N 3.14Å
44I57.5Low59.6Low62 Ų62107.6 Ų107.632%0.31856%0.556SS.*Hα-helixtrans-73.3-42.7178.5-68154.3000110.1R40 C41 S46 K47 S48 L68R40-I44 WeakPolarHBondContact O-CD1 3.46Å; C41-I44 PolarHBondContact O-N 2.9Å; C41-I44 VanDerWaalsContact O-N 3.08Å; I44-S46 VanDerWaalsContact C-N 3.35Å; I44-K47 PolarHBondContact O-N 3.28Å; I44-S48 PolarHBondContact O-N 3.05Å; I44-L68 HydrophobicContact CB-CD1 4.33Å; I44-L68 HydrophobicContact CD1-CD1 3.76Å; I44-L68 HydrophobicContact CD1-CD2 4Å; I44-L68 HydrophobicContact CD1-CG 4.06Å; I44-L68 HydrophobicContact CG1-CD1 3.97Å; I44-L68 HydrophobicContact CG2-CD1 3.45Å; I44-L68 VanDerWaalsContact CG2-CD1 3.45Å; I44-L68 HydrophobicContact CG2-CD2 3.92Å; I44-L68 HydrophobicContact CG2-CG 4.29Å
45I58.2Low60.5Low40 Ų40109.6 Ų109.621%0.20556%0.557CS.*Hα-helixtrans-69.6-32176.5-62.7166.6000111.1M27 W33 C41 S48M27-I45 HydrophobicContact CE-CG2 4.28Å; W33-I45 HydrophobicContact CH2-CB 4.45Å; W33-I45 HydrophobicContact CH2-CD1 4.21Å; W33-I45 HydrophobicContact CH2-CG2 4.18Å; W33-I45 HydrophobicContact CZ3-CD1 4.24Å; C41-I45 HydrophobicContact CB-CD1 4.4Å; C41-I45 WeakPolarHBondContact O-CG1 3.39Å; C41-I45 PolarHBondContact O-N 2.92Å; I45-S48 PolarHBondContact O-N 3.01Å; I45-S48 PolarHBondContact O-OG 2.73Å
46S52.7Low61.6Low59 Ų59107.5 Ų107.541%0.41354%0.541SS..Hα-helixtrans-69.9-36.317469.10000112S42 F43 I44 S48 R49S42-S46 VanDerWaalsContact O-CB 3.31Å; S42-S46 WeakPolarHBondContact O-CB 3.27Å; S42-S46 PolarHBondContact O-N 2.9Å; S42-S46 PolarHBondContact O-OG 3.08Å; F43-S46 WeakPolarHBondContact CA-OG 3.34Å; F43-S46 PolarHBondContact O-OG 3.18Å; I44-S46 VanDerWaalsContact C-N 3.35Å; S46-S48 VanDerWaalsContact C-N 3.29Å; S46-S48 PolarHBondContact O-N 3.41Å; S46-R49 WeakPolarHBondContact O-CB 3.47Å; S46-R49 PolarHBondContact O-N 3.48Å
47K60.6Low63.1Low115 Ų115109.9 Ų109.950%0.555%0.553SS.*Hα-helixtrans-65.3-28.2174.6-75.1-92.7-179.7174.50113.1F43 I44 R49 I50F43-K47 HydrophobicContact CE1-CG 4.25Å; F43-K47 VanDerWaalsContact CZ-CE 3.46Å; F43-K47 HydrophobicContact CZ-CG 4.4Å; F43-K47 VanDerWaalsContact O-CG 3.22Å; F43-K47 WeakPolarHBondContact O-CG 3.34Å; F43-K47 PolarHBondContact O-N 3.32Å; F43-K47 VanDerWaalsContact O-N 3.14Å; I44-K47 PolarHBondContact O-N 3.28Å; K47-R49 PolarHBondContact O-N 3.26Å; K47-I50 PolarHBondContact O-N 3.19Å
48S60.6Low64.5Low76 Ų76110.5 Ų110.553%0.53156%0.555SS.*THydrogen-bonded Turntrans-66.4-18.3175.273.70000113.3I44 I45 S46 I50I44-S48 PolarHBondContact O-N 3.05Å; I45-S48 PolarHBondContact O-N 3.01Å; I45-S48 PolarHBondContact O-OG 2.73Å; S46-S48 VanDerWaalsContact C-N 3.29Å; S46-S48 PolarHBondContact O-N 3.41Å; S48-I50 PolarHBondContact O-N 3.16Å
49R58.9Low65.9Low221 Ų221102.9 Ų102.983%0.83454%0.539SS*.THydrogen-bonded Turntrans-68.4-23.1171.2-60.5-171.1179.6-138.62.2112.9S46 K47 A51S46-R49 WeakPolarHBondContact O-CB 3.47Å; S46-R49 PolarHBondContact O-N 3.48Å; K47-R49 PolarHBondContact O-N 3.26Å; R49-A51 PolarHBondContact O-N 2.81Å
50I61Low67.3Low117 Ų117104.9 Ų104.960%0.653%0.532SS*.SBendtrans-83.5100.7171.6-60.1169.5000106.3K47 S48K47-I50 PolarHBondContact O-N 3.19Å; S48-I50 PolarHBondContact O-N 3.16Å
51A64.9Low68.5Low71 Ų71101.7 Ų101.759%0.58753%0.526SS*.  trans-53.3136.1173.500000109.5R49 L53R49-A51 PolarHBondContact O-N 2.81Å; A51-L53 PolarHBondContact O-N 3.44Å; A51-L53 VanDerWaalsContact O-N 3.1Å
52P69Low69.9Low80 Ų80106.7 Ų106.752%0.51955%0.548SS..  trans-55.4120.2177-2433000110.5K54 V56P52-K54 VanDerWaalsContact CB-O 3.26Å; P52-K54 WeakPolarHBondContact CB-O 3.46Å; P52-K54 PolarHBondContact O-N 3.42Å; P52-V56 HydrophobicContact CB-CG2 3.6Å; P52-V56 HydrophobicContact CG-CG2 3.94Å
53L75.5Confident71.2Confident179 Ų179108.8 Ų108.894%0.93755%0.554SS**SBendtrans-61.1-17.9176.4-66.5174.9000112.8A51A51-L53 PolarHBondContact O-N 3.44Å; A51-L53 VanDerWaalsContact O-N 3.1Å
54K80.4Confident72.6Confident173 Ų173107.1 Ų107.175%0.75255%0.548SS*.SBendtrans-114.5141.2174.5-65.6-177.9178-179.10108.3P52 V56P52-K54 VanDerWaalsContact CB-O 3.26Å; P52-K54 WeakPolarHBondContact CB-O 3.46Å; P52-K54 PolarHBondContact O-N 3.42Å; K54-V56 WeakPolarHBondContact O-CG2 3.28Å; K54-V56 PolarHBondContact O-N 3.23Å
55F81.4Confident73.6Confident201 Ų201107.1 Ų107.188%0.88256%0.557SS**  trans-53.9126.4174.1-174.6-96.5000110.7
56V80.5Confident74.7Confident47 Ų47108.5 Ų108.529%0.28557%0.57SS.*  trans-118.4130.2175.7-174.50000107.4P52 K54 R60 L61P52-V56 HydrophobicContact CB-CG2 3.6Å; P52-V56 HydrophobicContact CG-CG2 3.94Å; K54-V56 WeakPolarHBondContact O-CG2 3.28Å; K54-V56 PolarHBondContact O-N 3.23Å; V56-R60 HydrophobicContact CG1-CB 3.7Å; V56-R60 HydrophobicContact CG1-CG 3.67Å; V56-L61 HydrophobicContact CG1-CD2 4.46Å; V56-L61 HydrophobicContact CG1-CG 4.07Å
57N85.6Confident76.1Confident86 Ų86109 Ų10946%0.4657%0.571SS.*  trans-73.6157.4175.565.227.3000111.2S59 R60 L61N57-S59 VanDerWaalsContact C-N 3.29Å; N57-S59 PolarHBondContact O-N 3.31Å; N57-R60 PolarHBondContact O-N 3.45Å; N57-R60 WeakPolarHBondContact OD1-CA 3.49Å; N57-R60 WeakPolarHBondContact OD1-CB 3.5Å; N57-R60 PolarHBondContact OD1-N 3.33Å; N57-L61 PolarHBondContact O-N 2.95Å
58V82.7Confident76.8Confident101 Ų101106.7 Ų106.761%0.61256%0.564SS**Hα-helixtrans-58.1-42.7179.9179.30000111.2R60 L61 E62V58-R60 VanDerWaalsContact C-N 3.27Å; V58-R60 PolarHBondContact O-N 3.14Å; V58-L61 WeakPolarHBondContact O-CB 3.23Å; V58-L61 PolarHBondContact O-N 3.35Å; V58-E62 HydrophobicContact CG1-CG 4.45Å; V58-E62 WeakPolarHBondContact O-CG 3.36Å; V58-E62 PolarHBondContact O-N 2.85Å
59S83.7Confident77.5Confident81 Ų81105.9 Ų105.957%0.56656%0.561SS**Hα-helixtrans-59.2-34179.4-46.30000113.8N57 L63N57-S59 VanDerWaalsContact C-N 3.29Å; N57-S59 PolarHBondContact O-N 3.31Å; S59-L63 WeakPolarHBondContact O-CB 3.34Å; S59-L63 PolarHBondContact O-N 3.28Å
60R84.7Confident78.4Confident137 Ų137100.1 Ų100.152%0.51755%0.551SS.*Hα-helixtrans-72.7-37.9177179.665.6-179.2-78.93.1111.4V56 N57 V58 E62 L63 Q64V56-R60 HydrophobicContact CG1-CB 3.7Å; V56-R60 HydrophobicContact CG1-CG 3.67Å; N57-R60 PolarHBondContact O-N 3.45Å; N57-R60 WeakPolarHBondContact OD1-CA 3.49Å; N57-R60 WeakPolarHBondContact OD1-CB 3.5Å; N57-R60 PolarHBondContact OD1-N 3.33Å; V58-R60 VanDerWaalsContact C-N 3.27Å; V58-R60 PolarHBondContact O-N 3.14Å; R60-E62 VanDerWaalsContact C-N 3.35Å; R60-L63 PolarHBondContact O-N 2.97Å; R60-Q64 WeakPolarHBondContact O-CB 3.34Å; R60-Q64 VanDerWaalsContact O-CG 3.3Å; R60-Q64 WeakPolarHBondContact O-CG 3.22Å; R60-Q64 PolarHBondContact O-N 3.34Å
61L79.5Confident79.1Confident86 Ų86101.9 Ų101.945%0.4555%0.554SS.*Hα-helixtrans-61.8-45.5173.7-74.4164.4000110.5V56 N57 V58 Q64 A65V56-L61 HydrophobicContact CG1-CD2 4.46Å; V56-L61 HydrophobicContact CG1-CG 4.07Å; N57-L61 PolarHBondContact O-N 2.95Å; V58-L61 WeakPolarHBondContact O-CB 3.23Å; V58-L61 PolarHBondContact O-N 3.35Å; L61-Q64 PolarHBondContact O-N 3.14Å; L61-A65 WeakPolarHBondContact O-CB 3.33Å; L61-A65 PolarHBondContact O-N 3.3Å
62E84Confident79.1Confident120 Ų120101.5 Ų101.556%0.56154%0.542SS*.Hα-helixtrans-59.3-49176.5-69.7176.7166.300111.4V58 R60 Q64 A65 S66V58-E62 HydrophobicContact CG1-CG 4.45Å; V58-E62 WeakPolarHBondContact O-CG 3.36Å; V58-E62 PolarHBondContact O-N 2.85Å; R60-E62 VanDerWaalsContact C-N 3.35Å; E62-Q64 VanDerWaalsContact C-N 3.33Å; E62-Q64 PolarHBondContact O-N 2.96Å; E62-A65 WeakPolarHBondContact O-CB 3.37Å; E62-A65 PolarHBondContact O-N 2.87Å; E62-S66 PolarHBondContact O-N 2.92Å; E62-S66 PolarHBondContact O-OG 3.08Å; E62-S66 VanDerWaalsContact O-OG 3.08Å
63L81.2Confident79.4Confident103 Ų103106.3 Ų106.354%0.53956%0.56SS.*Hα-helixtrans-60.1-42.7177.3-178.365.7000112.1S59 R60 A65 S66 V67S59-L63 WeakPolarHBondContact O-CB 3.34Å; S59-L63 PolarHBondContact O-N 3.28Å; R60-L63 PolarHBondContact O-N 2.97Å; L63-A65 VanDerWaalsContact C-N 3.35Å; L63-S66 PolarHBondContact O-N 3.26Å; L63-V67 HydrophobicContact CD1-CG2 4.39Å; L63-V67 WeakPolarHBondContact O-CB 3.2Å; L63-V67 VanDerWaalsContact O-CG2 3.28Å; L63-V67 WeakPolarHBondContact O-CG2 3.38Å; L63-V67 PolarHBondContact O-N 2.93Å
64Q82.4Confident78.4Confident95 Ų95110 Ų11044%0.44456%0.561SS.*Hα-helixtrans-62.2-43.3176.5-77.7178.8-27.700111.5R60 L61 E62 V67 L68R60-Q64 WeakPolarHBondContact O-CB 3.34Å; R60-Q64 VanDerWaalsContact O-CG 3.3Å; R60-Q64 WeakPolarHBondContact O-CG 3.22Å; R60-Q64 PolarHBondContact O-N 3.34Å; L61-Q64 PolarHBondContact O-N 3.14Å; E62-Q64 VanDerWaalsContact C-N 3.33Å; E62-Q64 PolarHBondContact O-N 2.96Å; Q64-V67 PolarHBondContact O-N 3.14Å; Q64-L68 WeakPolarHBondContact O-CB 3.45Å; Q64-L68 PolarHBondContact O-N 3.35Å
65A78.4Confident78.3Confident62 Ų62106.8 Ų106.851%0.51255%0.551SS.*Hα-helixtrans-61.6-44.5175.700000111.4L61 E62 L63 L68 A69L61-A65 WeakPolarHBondContact O-CB 3.33Å; L61-A65 PolarHBondContact O-N 3.3Å; E62-A65 WeakPolarHBondContact O-CB 3.37Å; E62-A65 PolarHBondContact O-N 2.87Å; L63-A65 VanDerWaalsContact C-N 3.35Å; A65-L68 PolarHBondContact O-N 3.26Å; A65-A69 WeakPolarHBondContact O-CB 3.42Å; A65-A69 PolarHBondContact O-N 3.41Å
66S81.9Confident78.1Confident68 Ų68101.8 Ų101.848%0.47653%0.534SS..Hα-helixtrans-61.4-48.2176.3-55.70000112.3E62 L63 L68 A69 V70E62-S66 PolarHBondContact O-N 2.92Å; E62-S66 PolarHBondContact O-OG 3.08Å; E62-S66 VanDerWaalsContact O-OG 3.08Å; L63-S66 PolarHBondContact O-N 3.26Å; S66-L68 VanDerWaalsContact C-N 3.25Å; S66-L68 PolarHBondContact O-N 3.49Å; S66-A69 PolarHBondContact O-N 3.04Å; S66-V70 WeakPolarHBondContact O-CG2 3.5Å; S66-V70 PolarHBondContact O-N 2.94Å
67V81.6Confident78Confident71 Ų71104.9 Ų104.943%0.4355%0.548SS..Hα-helixtrans-60.9-38.9178.5170.20000111L63 Q64 K71L63-V67 HydrophobicContact CD1-CG2 4.39Å; L63-V67 WeakPolarHBondContact O-CB 3.2Å; L63-V67 VanDerWaalsContact O-CG2 3.28Å; L63-V67 WeakPolarHBondContact O-CG2 3.38Å; L63-V67 PolarHBondContact O-N 2.93Å; Q64-V67 PolarHBondContact O-N 3.14Å; V67-K71 HydrophobicContact CG1-CD 4.42Å; V67-K71 WeakPolarHBondContact O-CG 3.31Å; V67-K71 PolarHBondContact O-N 2.98Å; V67-K71 VanDerWaalsContact O-N 3.14Å
68L74.7Confident77.6Confident66 Ų66106 Ų10635%0.34655%0.553SS.*Hα-helixtrans-70-42.6178.8-166.6134.7000111.8I44 Q64 A65 S66 K71 L72I44-L68 HydrophobicContact CB-CD1 4.33Å; I44-L68 HydrophobicContact CD1-CD1 3.76Å; I44-L68 HydrophobicContact CD1-CD2 4Å; I44-L68 HydrophobicContact CD1-CG 4.06Å; I44-L68 HydrophobicContact CG1-CD1 3.97Å; I44-L68 HydrophobicContact CG2-CD1 3.45Å; I44-L68 VanDerWaalsContact CG2-CD1 3.45Å; I44-L68 HydrophobicContact CG2-CD2 3.92Å; I44-L68 HydrophobicContact CG2-CG 4.29Å; Q64-L68 WeakPolarHBondContact O-CB 3.45Å; Q64-L68 PolarHBondContact O-N 3.35Å; A65-L68 PolarHBondContact O-N 3.26Å; S66-L68 VanDerWaalsContact C-N 3.25Å; S66-L68 PolarHBondContact O-N 3.49Å; L68-K71 PolarHBondContact O-N 3.41Å; L68-L72 WeakPolarHBondContact O-CB 3.49Å; L68-L72 PolarHBondContact O-N 2.89Å
69A75.7Confident77.2Confident58 Ų58106.3 Ų106.348%0.47955%0.549SS..Hα-helixtrans-60.2-45175.300000111.8A65 S66 K71 L72 M73A65-A69 WeakPolarHBondContact O-CB 3.42Å; A65-A69 PolarHBondContact O-N 3.41Å; S66-A69 PolarHBondContact O-N 3.04Å; A69-K71 VanDerWaalsContact C-N 3.33Å; A69-K71 PolarHBondContact O-N 3.43Å; A69-L72 PolarHBondContact O-N 2.73Å; A69-L72 VanDerWaalsContact O-N 3.14Å; A69-M73 WeakPolarHBondContact O-CB 3.26Å; A69-M73 PolarHBondContact O-N 2.93Å
70V77.5Confident76.8Confident100 Ų100108 Ų10861%0.60655%0.548SS*.Hα-helixtrans-62-39.8176.8171.90000111.8S66 L72S66-V70 WeakPolarHBondContact O-CG2 3.5Å; S66-V70 PolarHBondContact O-N 2.94Å; V70-L72 VanDerWaalsContact C-N 3.3Å; V70-L72 PolarHBondContact O-N 3.05Å
71K74.9Confident76.2Confident154 Ų154105.9 Ų105.967%0.6755%0.55SS**Hα-helixtrans-70-27.2176.5-76.5-179.1177.2-177.30113.3V67 L68 A69V67-K71 HydrophobicContact CG1-CD 4.42Å; V67-K71 WeakPolarHBondContact O-CG 3.31Å; V67-K71 PolarHBondContact O-N 2.98Å; V67-K71 VanDerWaalsContact O-N 3.14Å; L68-K71 PolarHBondContact O-N 3.41Å; A69-K71 VanDerWaalsContact C-N 3.33Å; A69-K71 PolarHBondContact O-N 3.43Å
72L65.7Low76Confident64 Ų64107.5 Ų107.534%0.33556%0.558SS.*Hα-helixtrans-86-27.6-179.2-158.2115000112.9R40 C41 L68 A69 V70 R74R40-L72 HydrophobicContact CB-CD1 4.32Å; C41-L72 WeakPolarHBondContact SG-CD1 3.17Å; L68-L72 WeakPolarHBondContact O-CB 3.49Å; L68-L72 PolarHBondContact O-N 2.89Å; A69-L72 PolarHBondContact O-N 2.73Å; A69-L72 VanDerWaalsContact O-N 3.14Å; V70-L72 VanDerWaalsContact C-N 3.3Å; V70-L72 PolarHBondContact O-N 3.05Å; L72-R74 PolarHBondContact O-N 2.72Å
73M74.7Confident75.3Confident181 Ų181106.4 Ų106.489%0.89256%0.558SS**  trans-71-16.2175.4-168.1175.6-176.500112.7A69A69-M73 WeakPolarHBondContact O-CB 3.26Å; A69-M73 PolarHBondContact O-N 2.93Å
74R55.2Low74.8Confident255 Ų255106.7 Ų106.796%0.96256%0.559SS**  trans-89.40172.7-103.6-171.9150.791.40.4111.7L72L72-R74 PolarHBondContact O-N 2.72Å

Retrieved 74 of 74 residues in 32.6 ms (Link to these results)