G4VIZ2_SCHMA Loading...

Cytochrome b-c1 complex subunit 8

Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The complex plays an important role in the uptake of multiple carbon sources present in different host niches.

AlphaFold DB , UniProt , Accession G4VIZ2, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 77 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M81.3Confident91.5Very high215 Ų215155.1 Ų155.1100%1.05976%0.758SS**  0117.80-168169.7-176.200107.8L6M1-L6 HydrophobicContact CE-CD2 3.27Å; M1-L6 HydrophobicContact CG-CD2 3.67Å; M1-L6 HydrophobicContact SD-CD2 4.29Å
2K90.3Very high91.7Very high162 Ų162151.3 Ų151.370%0.70475%0.75SS**  trans-125.5143.7177.4-69.7-173.7178.4-178.40108.3G4 H5K2-G4 PolarHBondContact O-N 3.36Å; K2-H5 PolarHBondContact O-N 3.08Å
3F92.4Very high92Very high201 Ų201149.7 Ų149.788%0.88274%0.744SS**THydrogen-bonded Turntrans-52.8135.4168.3-71-69.4000109L6F3-L6 HydrophobicContact CD1-CD1 3.79Å; F3-L6 HydrophobicContact CE1-CD1 4.23Å
4G91.5Very high92.4Very high76 Ų76147.6 Ų147.678%0.78474%0.743SS**THydrogen-bonded Turntrans97.4-24.3-170.400000115.3K2K2-G4 PolarHBondContact O-N 3.36Å
5H93.8Very high92.7Very high164 Ų164151.8 Ų151.876%0.75975%0.749SS**SBendtrans-114.138.5175.5-61.180.5000111.5K2K2-H5 PolarHBondContact O-N 3.08Å
6L93.1Very high92.9Very high82 Ų82149.7 Ų149.743%0.42975%0.754SS.*SBendtrans-93.2175.8178.3-63.3177.4000110.8M1 F3M1-L6 HydrophobicContact CE-CD2 3.27Å; M1-L6 HydrophobicContact CG-CD2 3.67Å; M1-L6 HydrophobicContact SD-CD2 4.29Å; F3-L6 HydrophobicContact CD1-CD1 3.79Å; F3-L6 HydrophobicContact CE1-CD1 4.23Å
7H91.2Very high93.1Very high148 Ų148147.6 Ų147.669%0.68575%0.745SS**  trans-54138.6178.8-173.1-79.7000112.3R9H7-R9 PolarHBondContact O-N 3.23Å
8Y92.4Very high93.3Very high173 Ų173142.2 Ų142.268%0.67872%0.722SS**  trans-63.1129.3176.3-178.6-100.1000111.6R10Y8-R10 HydrophobicContact CE1-CB 3.97Å; Y8-R10 WeakPolarHBondContact OH-CD 3.36Å
9R90.4Very high93.4Very high194 Ų194140.2 Ų140.273%0.73272%0.72SS**  trans-137.7132.1177.5-68.6-74.3-130.6-96-2.7108.1H7H7-R9 PolarHBondContact O-N 3.23Å
10R94.5Very high93.5Very high211 Ų211144.3 Ų144.380%0.79673%0.727SS**  trans-133.8142.1178-175.3177.7178.1177.70109.7Y8Y8-R10 HydrophobicContact CE1-CB 3.97Å; Y8-R10 WeakPolarHBondContact OH-CD 3.36Å
11G95.3Very high93.5Very high80 Ų80144.1 Ų144.183%0.82572%0.724SS**SBendtrans79.821.8171.400000116.2
12V94.5Very high94.3Very high109 Ų109139 Ų13966%0.66170%0.698SS**  trans-110.5122.6177.4-178.10000109.5T14V12-T14 HydrophobicContact CG1-CG2 4.26Å
13I95.8Very high94.4Very high131 Ų131139.8 Ų139.867%0.67270%0.701SS**  trans-112.1132.4174.8-55.6174.9000108Y15I13-Y15 HydrophobicContact CG2-CE1 4.17Å; I13-Y15 HydrophobicContact CG2-CE2 4.06Å
14T96.8Very high94.5Very high121 Ų121134.8 Ų134.874%0.74270%0.697SS**  trans-125137.7179.655.20000110.3V12V12-T14 HydrophobicContact CG1-CG2 4.26Å
15Y97.3Very high94.5Very high210 Ų210139.1 Ų139.182%0.82469%0.694SS**  trans-111.2143.6178.1-55.1-83.5000110.2I13I13-Y15 HydrophobicContact CG2-CE1 4.17Å; I13-Y15 HydrophobicContact CG2-CE2 4.06Å
16S95.8Very high94.4Very high118 Ų118134.9 Ų134.983%0.82569%0.688SS**  trans-143.5145.7178.456.30000110
17L96Very high94.4Very high115 Ų115132.3 Ų132.360%0.60268%0.681SS**  trans-98.9155.1172.6-70.3166.1000110.4Q22L17-Q22 HydrophobicContact CB-CG 3.85Å; L17-Q22 HydrophobicContact CD1-CG 4.48Å; L17-Q22 PolarHBondContact O-NE2 3.28Å
18S96.2Very high94.4Very high49 Ų49130.9 Ų130.934%0.34367%0.673SS.*  trans-60.8139.7173.8178.70000110.5Y20 E21 Q22S18-Y20 PolarHBondContact O-N 3.45Å; S18-Y20 VanDerWaalsContact O-N 3.11Å; S18-E21 WeakPolarHBondContact CB-OE2 3.31Å; S18-E21 PolarHBondContact N-OE2 3.34Å; S18-E21 PolarHBondContact O-N 2.9Å; S18-Q22 PolarHBondContact O-N 3.49Å
19P95.3Very high94.3Very high104 Ų104130.4 Ų130.468%0.67568%0.675SS**G310 helixtrans-55.4-29.1175.9-26.434.9000113.6E21 Q22P19-E21 VanDerWaalsContact C-N 3.27Å; P19-E21 PolarHBondContact O-N 2.88Å; P19-Q22 PolarHBondContact O-N 3.15Å
20Y95.5Very high94.4Very high222 Ų222129.2 Ų129.287%0.87168%0.675SS**G310 helixtrans-76.2-12.1178.3-60.3-75.1000113.8S18S18-Y20 PolarHBondContact O-N 3.45Å; S18-Y20 VanDerWaalsContact O-N 3.11Å
21E94.9Very high94.3Very high142 Ų142123.8 Ų123.866%0.66466%0.662SS**G310 helixtrans-101.2-8.8176.9-62.8177.3131.500112.3S18 P19S18-E21 WeakPolarHBondContact CB-OE2 3.31Å; S18-E21 PolarHBondContact N-OE2 3.34Å; S18-E21 PolarHBondContact O-N 2.9Å; P19-E21 VanDerWaalsContact C-N 3.27Å; P19-E21 PolarHBondContact O-N 2.88Å
22Q96.2Very high94.2Very high108 Ų108121.6 Ų121.651%0.50564%0.639SS.*SBendtrans-97.1151.1-179.1-63.3-178.341.500111.5L17 S18 P19L17-Q22 HydrophobicContact CB-CG 3.85Å; L17-Q22 HydrophobicContact CD1-CG 4.48Å; L17-Q22 PolarHBondContact O-NE2 3.28Å; S18-Q22 PolarHBondContact O-N 3.49Å; P19-Q22 PolarHBondContact O-N 3.15Å
23K93.7Very high94.2Very high178 Ų178122 Ų12277%0.77463%0.632SS**  trans-87.1120.2169.7-64.7178.3-177.3178.80109.3F25 A26K23-F25 VanDerWaalsContact C-N 3.25Å; K23-F25 PolarHBondContact O-N 3.29Å; K23-A26 HydrophobicContact CB-CB 4.11Å; K23-A26 PolarHBondContact O-N 3.38Å
24A93.5Very high94.2Very high95 Ų95119.1 Ų119.179%0.78562%0.622SS**THydrogen-bonded Turntrans-56.8-33.9-176.800000114.5
25F92.3Very high94.1Very high168 Ų168116.7 Ų116.774%0.73760%0.604SS**THydrogen-bonded Turntrans-116.133.3-179.5-60.5-77.4000112.7K23 G27 F28K23-F25 VanDerWaalsContact C-N 3.25Å; K23-F25 PolarHBondContact O-N 3.29Å; F25-G27 PolarHBondContact O-N 3.04Å; F25-F28 HydrophobicContact CB-CB 4.44Å; F25-F28 HydrophobicContact CD1-CD2 4.49Å; F25-F28 PolarHBondContact O-N 3.44Å
26A92.3Very high94Very high75 Ų75111.5 Ų111.562%0.6259%0.59SS**THydrogen-bonded Turntrans-52.8128.9175.200000110.9K23 F28K23-A26 HydrophobicContact CB-CB 4.11Å; K23-A26 PolarHBondContact O-N 3.38Å; A26-F28 VanDerWaalsContact C-N 3.28Å; A26-F28 PolarHBondContact O-N 3.5Å
27G91.5Very high94.1Very high28 Ų28109.8 Ų109.829%0.28957%0.57SS.*THydrogen-bonded Turntrans70.114.8174.300000115.7F25 F29 K30 D31 G32F25-G27 PolarHBondContact O-N 3.04Å; G27-F29 PolarHBondContact O-N 3.43Å; G27-K30 PolarHBondContact O-N 2.99Å; G27-D31 WeakPolarHBondContact O-CA 3.16Å; G27-D31 PolarHBondContact O-N 2.85Å; G27-G32 PolarHBondContact O-N 2.86Å
28F91.1Very high94.1Very high117 Ų117110 Ų11051%0.51356%0.563SS.*Iπ-helixtrans-51-52.2-175.5-176.7-96000113.8F25 A26 G32 F33F25-F28 HydrophobicContact CB-CB 4.44Å; F25-F28 HydrophobicContact CD1-CD2 4.49Å; F25-F28 PolarHBondContact O-N 3.44Å; A26-F28 VanDerWaalsContact C-N 3.28Å; A26-F28 PolarHBondContact O-N 3.5Å; F28-G32 CarbonylContact O-C 3.43Å; F28-G32 WeakPolarHBondContact O-CA 3.4Å; F28-G32 PolarHBondContact O-N 3.15Å; F28-F33 PolarHBondContact O-N 3.14Å
29F91.9Very high94.1Very high163 Ų163114.9 Ų114.972%0.71557%0.574SS**Iπ-helixtrans-83.6-36.1179.7-65.1-71.5000113.5G27G27-F29 PolarHBondContact O-N 3.43Å
30K91.9Very high94.2Very high170 Ų170115.6 Ų115.674%0.73957%0.567SS**Iπ-helixtrans-73.7-46.3-175.6-175.6-177.3172.6-177.70112.4G27 P34G27-K30 PolarHBondContact O-N 2.99Å; K30-P34 WeakPolarHBondContact O-CD 3.45Å; K30-P34 VanDerWaalsContact O-CG 3.31Å; K30-P34 WeakPolarHBondContact O-CG 3.23Å
31D92.5Very high94.2Very high97 Ų97114 Ų11452%0.51956%0.559SS.*Iπ-helixtrans-112.7-38.6-172.7-52.6-50.5000111.1G27 N35G27-D31 WeakPolarHBondContact O-CA 3.16Å; G27-D31 PolarHBondContact O-N 2.85Å; D31-N35 WeakPolarHBondContact O-CB 3.5Å; D31-N35 PolarHBondContact O-N 3.44Å; D31-N35 VanDerWaalsContact O-N 3.15Å
32G93.2Very high94.3Very high33 Ų33112 Ų11234%0.3455%0.55SS..Iπ-helixtrans-65.6-49.9-177.900000113.1G27 F28 N35 L36G27-G32 PolarHBondContact O-N 2.86Å; F28-G32 CarbonylContact O-C 3.43Å; F28-G32 WeakPolarHBondContact O-CA 3.4Å; F28-G32 PolarHBondContact O-N 3.15Å; G32-N35 PolarHBondContact O-N 2.89Å; G32-L36 WeakPolarHBondContact O-CB 3.23Å; G32-L36 PolarHBondContact O-N 3.47Å
33F94Very high94.3Very high118 Ų118112.8 Ų112.852%0.51855%0.551SS.*Hα-helixtrans-66.2-47.1-177.7-175.1-96.1000113.4F28 N35 L36 M37F28-F33 PolarHBondContact O-N 3.14Å; F33-N35 VanDerWaalsContact C-N 3.29Å; F33-N35 PolarHBondContact O-N 2.69Å; F33-L36 WeakPolarHBondContact O-CB 3.36Å; F33-L36 PolarHBondContact O-N 3.27Å; F33-M37 HydrophobicContact CZ-CE 4.43Å; F33-M37 PolarHBondContact O-N 3.49Å
34P95.5Very high94.5Very high71 Ų71107 Ų10746%0.46153%0.531SS..Hα-helixtrans-60.4-38.1172.8-26.637.8000112.9K30 M37 R38K30-P34 WeakPolarHBondContact O-CD 3.45Å; K30-P34 VanDerWaalsContact O-CG 3.31Å; K30-P34 WeakPolarHBondContact O-CG 3.23Å; P34-M37 PolarHBondContact O-N 3.14Å; P34-R38 WeakPolarHBondContact O-CB 3.39Å; P34-R38 PolarHBondContact O-N 2.97Å
35N95.5Very high94.5Very high69 Ų69108.6 Ų108.637%0.36953%0.525SS..Hα-helixtrans-68.2-37.8176.9-173.155.3000112.3D31 G32 F33 M37 R38 R39D31-N35 WeakPolarHBondContact O-CB 3.5Å; D31-N35 PolarHBondContact O-N 3.44Å; D31-N35 VanDerWaalsContact O-N 3.15Å; G32-N35 PolarHBondContact O-N 2.89Å; F33-N35 VanDerWaalsContact C-N 3.29Å; F33-N35 PolarHBondContact O-N 2.69Å; N35-M37 VanDerWaalsContact C-N 3.35Å; N35-R38 PolarHBondContact O-N 2.95Å; N35-R38 PolarHBondContact OD1-NE 3.23Å; N35-R38 PolarHBondContact OD1-NH2 3.46Å; N35-R39 VanDerWaalsContact O-CG 3.28Å; N35-R39 WeakPolarHBondContact O-CG 3.29Å; N35-R39 PolarHBondContact O-N 3.08Å
36L96.1Very high94.7Very high101 Ų101106.3 Ų106.353%0.52952%0.52SS..Hα-helixtrans-60.3-46.6172.1178.667.7000110.4G32 F33 R38 R39 F40G32-L36 WeakPolarHBondContact O-CB 3.23Å; G32-L36 PolarHBondContact O-N 3.47Å; F33-L36 WeakPolarHBondContact O-CB 3.36Å; F33-L36 PolarHBondContact O-N 3.27Å; L36-R38 PolarHBondContact O-N 3.33Å; L36-R39 PolarHBondContact O-N 3.24Å; L36-F40 WeakPolarHBondContact O-CB 3.29Å; L36-F40 PolarHBondContact O-N 3.48Å
37M96.3Very high94.9Very high83 Ų83106.4 Ų106.441%0.40951%0.513SS..Hα-helixtrans-66.9-38-179-16650.268.100112.1F33 P34 N35 F40 R41F33-M37 HydrophobicContact CZ-CE 4.43Å; F33-M37 PolarHBondContact O-N 3.49Å; P34-M37 PolarHBondContact O-N 3.14Å; N35-M37 VanDerWaalsContact C-N 3.35Å; M37-F40 PolarHBondContact O-N 3.37Å; M37-F40 HydrophobicContact SD-CB 4.42Å; M37-F40 HydrophobicContact SD-CD1 3.99Å; M37-R41 VanDerWaalsContact O-CG 3.3Å; M37-R41 WeakPolarHBondContact O-CG 3.37Å; M37-R41 PolarHBondContact O-N 2.9Å
38R96.7Very high95.1Very high120 Ų120106.1 Ų106.145%0.45351%0.51SS..Hα-helixtrans-56.8-51169.8-176.7-1726375.5-3.1111.3P34 N35 L36 F40 R41 E42P34-R38 WeakPolarHBondContact O-CB 3.39Å; P34-R38 PolarHBondContact O-N 2.97Å; N35-R38 PolarHBondContact O-N 2.95Å; N35-R38 PolarHBondContact OD1-NE 3.23Å; N35-R38 PolarHBondContact OD1-NH2 3.46Å; L36-R38 PolarHBondContact O-N 3.33Å; R38-F40 VanDerWaalsContact C-N 3.35Å; R38-F40 PolarHBondContact O-N 3.38Å; R38-R41 PolarHBondContact O-N 3.42Å; R38-E42 IonicContact CZ-OE1 3.27Å; R38-E42 VanDerWaalsContact NH1-CD 3.34Å; R38-E42 IonicContact NH1-OE1 3.82Å; R38-E42 PolarHBondContact NH1-OE1 2.96Å; R38-E42 IonicContact NH1-OE2 2.69Å; R38-E42 PolarHBondContact NH1-OE2 3.4Å; R38-E42 WeakPolarHBondContact O-CG 3.36Å; R38-E42 PolarHBondContact O-N 2.98Å; R38-E42 VanDerWaalsContact O-N 3.16Å
39R96.6Very high95.4Very high151 Ų151103.9 Ų103.957%0.5751%0.506SS*.Hα-helixtrans-62.6-38.8179-71.1174.569.3-174.21.4112.7N35 L36N35-R39 VanDerWaalsContact O-CG 3.28Å; N35-R39 WeakPolarHBondContact O-CG 3.29Å; N35-R39 PolarHBondContact O-N 3.08Å; L36-R39 PolarHBondContact O-N 3.24Å
40F97.3Very high95.7Very high119 Ų11999.4 Ų99.452%0.52249%0.493SS..Hα-helixtrans-63-49177177.7-101.1000111L36 M37 R38 E42 K43 V44L36-F40 WeakPolarHBondContact O-CB 3.29Å; L36-F40 PolarHBondContact O-N 3.48Å; M37-F40 PolarHBondContact O-N 3.37Å; M37-F40 HydrophobicContact SD-CB 4.42Å; M37-F40 HydrophobicContact SD-CD1 3.99Å; R38-F40 VanDerWaalsContact C-N 3.35Å; R38-F40 PolarHBondContact O-N 3.38Å; F40-E42 VanDerWaalsContact C-N 3.3Å; F40-E42 PolarHBondContact O-N 3.25Å; F40-K43 PolarHBondContact O-N 2.99Å; F40-V44 HydrophobicContact CD1-CB 4.45Å; F40-V44 HydrophobicContact CE1-CB 4.06Å; F40-V44 HydrophobicContact CE1-CG2 3.93Å; F40-V44 HydrophobicContact CE2-CB 4.48Å; F40-V44 HydrophobicContact CE2-CG2 4.33Å; F40-V44 HydrophobicContact CZ-CB 4.08Å; F40-V44 HydrophobicContact CZ-CG2 3.67Å; F40-V44 WeakPolarHBondContact O-CB 3.37Å; F40-V44 PolarHBondContact O-N 3.35Å
41R95.9Very high95.9Very high187 Ų18798.2 Ų98.271%0.70649%0.488SS*.Hα-helixtrans-60.4-36.1179.2-71.5175.968.9-176.71.9113.2M37 R38 K43M37-R41 VanDerWaalsContact O-CG 3.3Å; M37-R41 WeakPolarHBondContact O-CG 3.37Å; M37-R41 PolarHBondContact O-N 2.9Å; R38-R41 PolarHBondContact O-N 3.42Å; R41-K43 PolarHBondContact O-N 3.02Å
42E96.4Very high96.2Very high101 Ų10197.6 Ų97.647%0.47249%0.488SS..Hα-helixtrans-66.1-23.6176.8-73.9168.1-17100113.5R38 F40R38-E42 IonicContact CZ-OE1 3.27Å; R38-E42 VanDerWaalsContact NH1-CD 3.34Å; R38-E42 IonicContact NH1-OE1 3.82Å; R38-E42 PolarHBondContact NH1-OE1 2.96Å; R38-E42 IonicContact NH1-OE2 2.69Å; R38-E42 PolarHBondContact NH1-OE2 3.4Å; R38-E42 WeakPolarHBondContact O-CG 3.36Å; R38-E42 PolarHBondContact O-N 2.98Å; R38-E42 VanDerWaalsContact O-N 3.16Å; F40-E42 VanDerWaalsContact C-N 3.3Å; F40-E42 PolarHBondContact O-N 3.25Å
43K96.3Very high96.4Very high124 Ų12499.8 Ų99.854%0.53949%0.491SS..Hα-helixtrans-112.2-23.8-174.2-62.1-58.8179.9-172.90114.2F40 R41 L45 I46 V47F40-K43 PolarHBondContact O-N 2.99Å; R41-K43 PolarHBondContact O-N 3.02Å; K43-L45 VanDerWaalsContact C-N 3.28Å; K43-L45 PolarHBondContact O-N 3.15Å; K43-I46 PolarHBondContact O-N 2.91Å; K43-I46 VanDerWaalsContact O-N 3.15Å; K43-V47 HydrophobicContact CB-CG2 4.47Å; K43-V47 WeakPolarHBondContact O-CB 3.32Å; K43-V47 PolarHBondContact O-N 3.33Å
44V96.9Very high96.6Very high57 Ų5797.5 Ų97.535%0.34549%0.486SS..Hα-helixtrans-58.6-35.9-173.569.60000113.1F40 G48F40-V44 HydrophobicContact CD1-CB 4.45Å; F40-V44 HydrophobicContact CE1-CB 4.06Å; F40-V44 HydrophobicContact CE1-CG2 3.93Å; F40-V44 HydrophobicContact CE2-CB 4.48Å; F40-V44 HydrophobicContact CE2-CG2 4.33Å; F40-V44 HydrophobicContact CZ-CB 4.08Å; F40-V44 HydrophobicContact CZ-CG2 3.67Å; F40-V44 WeakPolarHBondContact O-CB 3.37Å; F40-V44 PolarHBondContact O-N 3.35Å; V44-G48 WeakPolarHBondContact O-CA 3.36Å; V44-G48 PolarHBondContact O-N 2.82Å
45L94.8Very high96.7Very high128 Ų128101.3 Ų101.367%0.6749%0.493SS*.Hα-helixtrans-75-44.2176.9-64.9177.4000111.7K43 V47 T49K43-L45 VanDerWaalsContact C-N 3.28Å; K43-L45 PolarHBondContact O-N 3.15Å; L45-V47 VanDerWaalsContact C-N 3.35Å; L45-V47 PolarHBondContact O-N 2.9Å; L45-T49 WeakPolarHBondContact O-CB 3.27Å; L45-T49 PolarHBondContact O-N 2.97Å; L45-T49 VanDerWaalsContact O-N 3.11Å; L45-T49 PolarHBondContact O-OG1 3.28Å
46I95.8Very high96.8Very high121 Ų121102.9 Ų102.962%0.62150%0.499SS*.Hα-helixtrans-63.5-44-178.9-58.9175.7000110.9K43 P50K43-I46 PolarHBondContact O-N 2.91Å; K43-I46 VanDerWaalsContact O-N 3.15Å; I46-P50 WeakPolarHBondContact O-CD 3.25Å
47V96.4Very high96.9Very high77 Ų77102.7 Ų102.747%0.46750%0.497SS..Hα-helixtrans-87.3-41.6-176.5179.60000111.2K43 L45 P50 F51K43-V47 HydrophobicContact CB-CG2 4.47Å; K43-V47 WeakPolarHBondContact O-CB 3.32Å; K43-V47 PolarHBondContact O-N 3.33Å; L45-V47 VanDerWaalsContact C-N 3.35Å; L45-V47 PolarHBondContact O-N 2.9Å; V47-P50 VanDerWaalsContact O-CD 3.27Å; V47-P50 WeakPolarHBondContact O-CD 3.17Å; V47-P50 VanDerWaalsContact O-CG 3.25Å; V47-P50 WeakPolarHBondContact O-CG 3.47Å; V47-F51 HydrophobicContact CG1-CD2 4.12Å; V47-F51 HydrophobicContact CG1-CE2 3.73Å; V47-F51 WeakPolarHBondContact O-CD2 3.08Å
48G96.9Very high97Very high22 Ų22102.9 Ų102.923%0.22750%0.499CS..Hα-helixtrans-73.2-34.1-174.700000113.8V44 F51 V52V44-G48 WeakPolarHBondContact O-CA 3.36Å; V44-G48 PolarHBondContact O-N 2.82Å; G48-F51 PolarHBondContact O-N 2.75Å; G48-F51 VanDerWaalsContact O-N 3.15Å; G48-V52 WeakPolarHBondContact O-CG2 3.38Å; G48-V52 PolarHBondContact O-N 3.11Å
49T96.2Very high97Very high70 Ų70102.5 Ų102.543%0.42950%0.502SS..Hα-helixtrans-54.5-52.6179.6-67.90000113.5L45 F51 V52 I53L45-T49 WeakPolarHBondContact O-CB 3.27Å; L45-T49 PolarHBondContact O-N 2.97Å; L45-T49 VanDerWaalsContact O-N 3.11Å; L45-T49 PolarHBondContact O-OG1 3.28Å; T49-F51 VanDerWaalsContact C-N 3.29Å; T49-F51 PolarHBondContact O-N 3.15Å; T49-V52 PolarHBondContact O-N 2.89Å; T49-I53 HydrophobicContact CG2-CD1 3.7Å; T49-I53 HydrophobicContact CG2-CG1 4.39Å; T49-I53 VanDerWaalsContact O-CG1 3.32Å; T49-I53 WeakPolarHBondContact O-CG1 3.38Å; T49-I53 PolarHBondContact O-N 3.43Å
50P97.6Very high97.1Very high68 Ų68103.4 Ų103.444%0.44251%0.506SS..Hα-helixtrans-63.2-33.9178.323.7-34.1000112.8I46 V47 T54I46-P50 WeakPolarHBondContact O-CD 3.25Å; V47-P50 VanDerWaalsContact O-CD 3.27Å; V47-P50 WeakPolarHBondContact O-CD 3.17Å; V47-P50 VanDerWaalsContact O-CG 3.25Å; V47-P50 WeakPolarHBondContact O-CG 3.47Å; P50-T54 VanDerWaalsContact O-CB 3.29Å; P50-T54 WeakPolarHBondContact O-CB 3.42Å; P50-T54 PolarHBondContact O-N 3.06Å; P50-T54 PolarHBondContact O-OG1 3.35Å
51F97.7Very high97.1Very high145 Ų14599.7 Ų99.764%0.63650%0.497SS*.Hα-helixtrans-65.6-44.7175.4-75.1-63.6000112.4V47 G48 T49 T54 Y55V47-F51 HydrophobicContact CG1-CD2 4.12Å; V47-F51 HydrophobicContact CG1-CE2 3.73Å; V47-F51 WeakPolarHBondContact O-CD2 3.08Å; G48-F51 PolarHBondContact O-N 2.75Å; G48-F51 VanDerWaalsContact O-N 3.15Å; T49-F51 VanDerWaalsContact C-N 3.29Å; T49-F51 PolarHBondContact O-N 3.15Å; F51-T54 PolarHBondContact O-N 3.33Å; F51-Y55 WeakPolarHBondContact O-CB 3.47Å; F51-Y55 PolarHBondContact O-N 3Å
52V97.7Very high97.1Very high85 Ų8594.8 Ų94.852%0.51549%0.485SS..Hα-helixtrans-63.1-45.5177.51740000110.5G48 T49 T54 Y55 M56G48-V52 WeakPolarHBondContact O-CG2 3.38Å; G48-V52 PolarHBondContact O-N 3.11Å; T49-V52 PolarHBondContact O-N 2.89Å; V52-T54 PolarHBondContact O-N 3.32Å; V52-Y55 PolarHBondContact O-N 3.37Å; V52-M56 HydrophobicContact CG1-CE 4.16Å; V52-M56 WeakPolarHBondContact O-CG 3.09Å; V52-M56 PolarHBondContact O-N 3.41Å
53I97.9Very high97.1Very high79 Ų7994.6 Ų94.641%0.40548%0.484SS..Hα-helixtrans-60.2-47.2176.3-66.5171.9000111.1T49 Y55 M56 I57T49-I53 HydrophobicContact CG2-CD1 3.7Å; T49-I53 HydrophobicContact CG2-CG1 4.39Å; T49-I53 VanDerWaalsContact O-CG1 3.32Å; T49-I53 WeakPolarHBondContact O-CG1 3.38Å; T49-I53 PolarHBondContact O-N 3.43Å; I53-Y55 VanDerWaalsContact C-N 3.32Å; I53-Y55 PolarHBondContact O-N 3.22Å; I53-M56 HydrophobicContact CB-CE 4.47Å; I53-M56 HydrophobicContact CG1-CE 4.15Å; I53-M56 PolarHBondContact O-N 3.27Å; I53-I57 HydrophobicContact CG2-CD1 3.84Å; I53-I57 HydrophobicContact CG2-CG1 4.47Å; I53-I57 WeakPolarHBondContact O-CG1 3.4Å; I53-I57 PolarHBondContact O-N 2.86Å
54T97.9Very high97Very high70 Ų7091.8 Ų91.843%0.42947%0.473SS..Hα-helixtrans-61.7-42.4179.6-57.10000111.2P50 F51 V52 M56 I57 I58P50-T54 VanDerWaalsContact O-CB 3.29Å; P50-T54 WeakPolarHBondContact O-CB 3.42Å; P50-T54 PolarHBondContact O-N 3.06Å; P50-T54 PolarHBondContact O-OG1 3.35Å; F51-T54 PolarHBondContact O-N 3.33Å; V52-T54 PolarHBondContact O-N 3.32Å; T54-M56 PolarHBondContact O-N 3.16Å; T54-I57 PolarHBondContact O-N 3.01Å; T54-I58 HydrophobicContact CG2-CD1 3.86Å; T54-I58 HydrophobicContact CG2-CG1 4.43Å; T54-I58 VanDerWaalsContact O-CG1 3.29Å; T54-I58 WeakPolarHBondContact O-CG1 3.28Å; T54-I58 PolarHBondContact O-N 3.22Å
55Y98Very high96.8Very high150 Ų15093 Ų9359%0.58848%0.477SS*.Hα-helixtrans-59.7-46.9176.2178.1-92.7000111.6F51 V52 I53 I57 I58 E59F51-Y55 WeakPolarHBondContact O-CB 3.47Å; F51-Y55 PolarHBondContact O-N 3Å; V52-Y55 PolarHBondContact O-N 3.37Å; I53-Y55 VanDerWaalsContact C-N 3.32Å; I53-Y55 PolarHBondContact O-N 3.22Å; Y55-I57 VanDerWaalsContact C-N 3.33Å; Y55-I57 PolarHBondContact O-N 2.69Å; Y55-I58 PolarHBondContact O-N 3.44Å; Y55-E59 WeakPolarHBondContact CE1-OE2 3.43Å; Y55-E59 PolarHBondContact O-N 3.47Å
56M98Very high96.8Very high103 Ų10393 Ų9351%0.50747%0.472SS..Hα-helixtrans-60.3-40.8176.4-69-173.9-62.300112.4V52 I53 T54 E59 W60V52-M56 HydrophobicContact CG1-CE 4.16Å; V52-M56 WeakPolarHBondContact O-CG 3.09Å; V52-M56 PolarHBondContact O-N 3.41Å; I53-M56 HydrophobicContact CB-CE 4.47Å; I53-M56 HydrophobicContact CG1-CE 4.15Å; I53-M56 PolarHBondContact O-N 3.27Å; T54-M56 PolarHBondContact O-N 3.16Å; M56-E59 PolarHBondContact O-N 3.39Å; M56-W60 WeakPolarHBondContact O-CB 3.44Å; M56-W60 PolarHBondContact O-N 2.75Å
57I98Very high96.6Very high96 Ų9694.5 Ų94.549%0.49247%0.47SS..Hα-helixtrans-64-43.6176.8-68.5167.2000111I53 T54 Y55 W60 A61I53-I57 HydrophobicContact CG2-CD1 3.84Å; I53-I57 HydrophobicContact CG2-CG1 4.47Å; I53-I57 WeakPolarHBondContact O-CG1 3.4Å; I53-I57 PolarHBondContact O-N 2.86Å; T54-I57 PolarHBondContact O-N 3.01Å; Y55-I57 VanDerWaalsContact C-N 3.33Å; Y55-I57 PolarHBondContact O-N 2.69Å; I57-W60 PolarHBondContact O-N 3Å; I57-A61 VanDerWaalsContact O-CB 3.23Å; I57-A61 WeakPolarHBondContact O-CB 3.3Å; I57-A61 PolarHBondContact O-N 2.84Å
58I98.1Very high96.2Very high87 Ų8794.8 Ų94.845%0.44648%0.475SS..Hα-helixtrans-63.5-43.9179.1-70.3167.8000110.6T54 Y55 A61 N62T54-I58 HydrophobicContact CG2-CD1 3.86Å; T54-I58 HydrophobicContact CG2-CG1 4.43Å; T54-I58 VanDerWaalsContact O-CG1 3.29Å; T54-I58 WeakPolarHBondContact O-CG1 3.28Å; T54-I58 PolarHBondContact O-N 3.22Å; Y55-I58 PolarHBondContact O-N 3.44Å; I58-A61 PolarHBondContact O-N 3.49Å; I58-N62 WeakPolarHBondContact O-CB 3.48Å; I58-N62 VanDerWaalsContact O-CG 3.24Å; I58-N62 PolarHBondContact O-N 3.23Å; I58-N62 PolarHBondContact O-ND2 3.15Å; I58-N62 VanDerWaalsContact O-ND2 3.14Å
59E97.7Very high95.8Very high112 Ų112101.3 Ų101.352%0.52350%0.498SS..Hα-helixtrans-62.3-48.4178.1-171.7173.3-167.700111.4Y55 M56 A61 N62 E63Y55-E59 WeakPolarHBondContact CE1-OE2 3.43Å; Y55-E59 PolarHBondContact O-N 3.47Å; M56-E59 PolarHBondContact O-N 3.39Å; E59-A61 PolarHBondContact O-N 2.91Å; E59-N62 PolarHBondContact O-N 3.29Å; E59-E63 PolarHBondContact O-N 3.37Å; E59-E63 VanDerWaalsContact O-N 3.08Å
60W97.6Very high95.2Very high170 Ų170105.4 Ų105.464%0.64451%0.505SS*.Hα-helixtrans-59.1-47.5175170.277.6000112.3M56 I57 N62 E63 E64M56-W60 WeakPolarHBondContact O-CB 3.44Å; M56-W60 PolarHBondContact O-N 2.75Å; I57-W60 PolarHBondContact O-N 3Å; W60-N62 VanDerWaalsContact C-N 3.3Å; W60-N62 PolarHBondContact O-N 3.34Å; W60-E63 PolarHBondContact O-N 2.95Å; W60-E64 HydrophobicContact CZ2-CG 4.43Å; W60-E64 WeakPolarHBondContact O-CB 3.46Å; W60-E64 PolarHBondContact O-N 3.33Å
61A97.1Very high94.3Very high41 Ų41112 Ų11234%0.33953%0.527SS..Hα-helixtrans-63-37.5-179.500000112.1I57 I58 E59 N65I57-A61 VanDerWaalsContact O-CB 3.23Å; I57-A61 WeakPolarHBondContact O-CB 3.3Å; I57-A61 PolarHBondContact O-N 2.84Å; I58-A61 PolarHBondContact O-N 3.49Å; E59-A61 PolarHBondContact O-N 2.91Å; A61-N65 WeakPolarHBondContact O-CB 3.16Å; A61-N65 PolarHBondContact O-N 2.82Å
62N97Very high93Very high84 Ų84107.9 Ų107.945%0.44952%0.52SS..Hα-helixtrans-66.7-42176.1-77.2-32000112.2I58 E59 W60 K66I58-N62 WeakPolarHBondContact O-CB 3.48Å; I58-N62 VanDerWaalsContact O-CG 3.24Å; I58-N62 PolarHBondContact O-N 3.23Å; I58-N62 PolarHBondContact O-ND2 3.15Å; I58-N62 VanDerWaalsContact O-ND2 3.14Å; E59-N62 PolarHBondContact O-N 3.29Å; W60-N62 VanDerWaalsContact C-N 3.3Å; W60-N62 PolarHBondContact O-N 3.34Å; N62-K66 WeakPolarHBondContact O-CG 3.14Å; N62-K66 PolarHBondContact O-N 3.29Å; N62-K66 VanDerWaalsContact O-N 3.14Å
63E95.2Very high91.4Very high97 Ų97107.8 Ų107.845%0.45353%0.528SS..Hα-helixtrans-70.4-41.6177.9-171.155.1-146.700111.9E59 W60 N65 K66 R67E59-E63 PolarHBondContact O-N 3.37Å; E59-E63 VanDerWaalsContact O-N 3.08Å; W60-E63 PolarHBondContact O-N 2.95Å; E63-N65 VanDerWaalsContact C-N 3.34Å; E63-N65 PolarHBondContact O-N 2.83Å; E63-K66 WeakPolarHBondContact O-CB 3.5Å; E63-K66 PolarHBondContact O-N 2.96Å; E63-K66 VanDerWaalsContact O-N 3.15Å; E63-R67 WeakPolarHBondContact O-CB 3.4Å; E63-R67 PolarHBondContact O-N 2.83Å
64E93.8Very high89.8Confident65 Ų65111.1 Ų111.130%0.30454%0.542SS..Hα-helixtrans-65.4-37.9177.6-171.158.4-155.400111.9W60 K66 R67 S68W60-E64 HydrophobicContact CZ2-CG 4.43Å; W60-E64 WeakPolarHBondContact O-CB 3.46Å; W60-E64 PolarHBondContact O-N 3.33Å; E64-K66 VanDerWaalsContact C-N 3.35Å; E64-K66 PolarHBondContact O-N 2.89Å; E64-R67 PolarHBondContact O-N 3.25Å; E64-R67 IonicContact OE2-NH1 3.77Å; E64-S68 VanDerWaalsContact O-CB 3.31Å; E64-S68 WeakPolarHBondContact O-CB 3.42Å; E64-S68 PolarHBondContact O-N 3.19Å; E64-S68 PolarHBondContact O-OG 3.17Å
65N94.3Very high88Confident82 Ų82115.3 Ų115.344%0.43956%0.558SS.*Hα-helixtrans-63.6-38.4172.8-179.243.8000112.1A61 E63 K69A61-N65 WeakPolarHBondContact O-CB 3.16Å; A61-N65 PolarHBondContact O-N 2.82Å; E63-N65 VanDerWaalsContact C-N 3.34Å; E63-N65 PolarHBondContact O-N 2.83Å; N65-K69 WeakPolarHBondContact O-CG 3.31Å; N65-K69 PolarHBondContact O-N 3.37Å; N65-K69 VanDerWaalsContact OD1-CE 3.23Å; N65-K69 WeakPolarHBondContact OD1-CE 3.33Å
66K93.6Very high86.1Confident128 Ų128115.9 Ų115.956%0.55757%0.571SS**Hα-helixtrans-67-45.4173.5-72.8173-172.7172.50111.3N62 E63 E64 K69N62-K66 WeakPolarHBondContact O-CG 3.14Å; N62-K66 PolarHBondContact O-N 3.29Å; N62-K66 VanDerWaalsContact O-N 3.14Å; E63-K66 WeakPolarHBondContact O-CB 3.5Å; E63-K66 PolarHBondContact O-N 2.96Å; E63-K66 VanDerWaalsContact O-N 3.15Å; E64-K66 VanDerWaalsContact C-N 3.35Å; E64-K66 PolarHBondContact O-N 2.89Å; K66-K69 PolarHBondContact O-N 3.27Å
67R91.3Very high83.9Confident153 Ų153121.5 Ų121.558%0.57760%0.596SS**Hα-helixtrans-59.4-47.5178.7-178.5-174.4179.6-172.21.7111.8E63 E64 K69 R70E63-R67 WeakPolarHBondContact O-CB 3.4Å; E63-R67 PolarHBondContact O-N 2.83Å; E64-R67 PolarHBondContact O-N 3.25Å; E64-R67 IonicContact OE2-NH1 3.77Å; R67-K69 PolarHBondContact O-N 3.3Å; R67-R70 PolarHBondContact O-N 3.27Å; R67-R70 VanDerWaalsContact O-N 3.15Å
68S88.5Confident83.2Confident83 Ų83122.8 Ų122.858%0.5860%0.601SS**Hα-helixtrans-64.8-25.4-177.3-64.70000113.6E64E64-S68 VanDerWaalsContact O-CB 3.31Å; E64-S68 WeakPolarHBondContact O-CB 3.42Å; E64-S68 PolarHBondContact O-N 3.19Å; E64-S68 PolarHBondContact O-OG 3.17Å
69K88.8Confident82.4Confident160 Ų160124.6 Ų124.670%0.69661%0.609SS**THydrogen-bonded Turntrans-85.2-11.7177.2-70.9-179.6-175.61800114N65 K66 R67N65-K69 WeakPolarHBondContact O-CG 3.31Å; N65-K69 PolarHBondContact O-N 3.37Å; N65-K69 VanDerWaalsContact OD1-CE 3.23Å; N65-K69 WeakPolarHBondContact OD1-CE 3.33Å; K66-K69 PolarHBondContact O-N 3.27Å; R67-K69 PolarHBondContact O-N 3.3Å
70R84.4Confident81.5Confident155 Ų155125.3 Ų125.359%0.58561%0.614SS**SBendtrans-74.8137175.2-64.1-167.4-65.3-126.11.9109R67 A72R67-R70 PolarHBondContact O-N 3.27Å; R67-R70 VanDerWaalsContact O-N 3.15Å; R70-A72 PolarHBondContact O-N 3.35Å
71K78.8Confident80.6Confident206 Ų206122.7 Ų122.790%0.89661%0.612SS**  trans-60.3126.5169.3-66.5-177.7179.3-178.20108A73K71-A73 PolarHBondContact O-N 3.11Å
72A69.2Low79.6Confident59 Ų59127.8 Ų127.849%0.48863%0.629SS.*  trans-69.6102.2177.300000109.1R70 H74 M75R70-A72 PolarHBondContact O-N 3.35Å; A72-H74 PolarHBondContact O-N 3.46Å; A72-M75 HydrophobicContact CB-CB 4.03Å; A72-M75 HydrophobicContact CB-CG 3.47Å; A72-M75 VanDerWaalsContact CB-CG 3.47Å; A72-M75 PolarHBondContact O-N 3.42Å; A72-M75 VanDerWaalsContact O-N 3.08Å
73A64Low78.4Confident84 Ų84130.7 Ų130.769%0.69464%0.641SS**G310 helixtrans-58.4-31.6178.800000112.1K71 M75K71-A73 PolarHBondContact O-N 3.11Å; A73-M75 VanDerWaalsContact C-N 3.33Å; A73-M75 PolarHBondContact O-N 2.94Å
74H65.1Low77.2Confident148 Ų148133.1 Ų133.169%0.68565%0.654SS**G310 helixtrans-75.9-12.4178.4-170-65.1000114A72 L76A72-H74 PolarHBondContact O-N 3.46Å; H74-L76 PolarHBondContact O-N 3.44Å
75M59.3Low75.9Confident159 Ų159138.4 Ų138.478%0.78368%0.681SS**G310 helixtrans-81.40177.9-69.3-78.1-86.900112.8A72 A73A72-M75 HydrophobicContact CB-CB 4.03Å; A72-M75 HydrophobicContact CB-CG 3.47Å; A72-M75 VanDerWaalsContact CB-CG 3.47Å; A72-M75 PolarHBondContact O-N 3.42Å; A72-M75 VanDerWaalsContact O-N 3.08Å; A73-M75 VanDerWaalsContact C-N 3.33Å; A73-M75 PolarHBondContact O-N 2.94Å
76L59.3Low74.4Confident162 Ų162143.1 Ų143.185%0.84870%0.701SS**G310 helixtrans-108.57.3179.3-69171.8000113H74H74-L76 PolarHBondContact O-N 3.44Å
77E50.6Low72.7Confident220 Ų220144.5 Ų144.5100%1.02872%0.715SS**  trans-110.70168.7-65.9-179.317700109.6

Retrieved 77 of 77 residues in 45.4 ms (Link to these results)