G4VK02_SCHMA Loading...

Uncharacterized protein

AlphaFold DB , UniProt , Accession G4VK02, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 61 aa.

						>G4VK02_SCHMA|G4VK02
MGERLRSTTNANSNIFQDERYIKQIKKSGSLVSKYGDFYKMHCQNGNNIFIREKCGENKLA
					

Structure Viewer

Loading PAE data...

(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	37.5	Very low	38.9	Very low	256 Å²	256	155.5 Å²	155.5	100%	1.261	83%	0.833	S	S	*	*				0	101.3	0	-61.6	-179.6	-174.1	0	0	105.9
2	G	37.9	Very low	39.1	Very low	69 Å²	69	151.7 Å²	151.7	71%	0.711	81%	0.812	S	S	*	*			cis	140.9	77	28.6	0	0	0	0	0	104.5	R4	G2-R4 PolarHBondContact O-N 3.28Å
3	E	41.4	Very low	39.5	Very low	182 Å²	182	147.8 Å²	147.8	85%	0.85	80%	0.804	S	S	*	*			trans	-55.1	118.2	-172.2	-69.2	160.6	85.1	0	0	111.5	L5	E3-L5 PolarHBondContact O-N 2.71Å
4	R	38.2	Very low	39.8	Very low	247 Å²	247	146.9 Å²	146.9	93%	0.932	80%	0.798	S	S	*	*			trans	-95.4	70.1	170.2	-87.8	-178.4	174.4	147.1	-1.2	109.9	G2 R6	G2-R4 PolarHBondContact O-N 3.28Å; R4-R6 PolarHBondContact O-N 3.1Å
5	L	41.5	Very low	40.3	Very low	152 Å²	152	142.9 Å²	142.9	80%	0.796	78%	0.775	S	S	*	*			trans	-83.8	88.1	156.9	-80.6	163.7	0	0	0	107.6	E3 S7	E3-L5 PolarHBondContact O-N 2.71Å; L5-S7 VanDerWaalsContact C-N 3.32Å; L5-S7 PolarHBondContact O-N 3.09Å
6	R	36.4	Very low	41	Very low	220 Å²	220	137 Å²	137	83%	0.83	74%	0.74	S	S	*	*			trans	-74.3	86.8	177	-159.6	-179.1	-172.7	-155.2	2.4	108.7	R4 T8	R4-R6 PolarHBondContact O-N 3.1Å; R6-T8 VanDerWaalsContact C-N 3.33Å; R6-T8 HydrophobicContact CG-CG2 4.49Å; R6-T8 PolarHBondContact O-N 2.93Å
7	S	35.9	Very low	41.6	Very low	108 Å²	108	135.9 Å²	135.9	76%	0.755	73%	0.729	S	S	*	*			trans	-62.5	94.7	159.8	-82.3	0	0	0	0	108.8	L5 T9	L5-S7 VanDerWaalsContact C-N 3.32Å; L5-S7 PolarHBondContact O-N 3.09Å; S7-T9 VanDerWaalsContact C-N 3.33Å; S7-T9 PolarHBondContact O-N 3.33Å
8	T	40.2	Very low	42.4	Very low	109 Å²	109	132.1 Å²	132.1	67%	0.669	71%	0.708	S	S	*	*			trans	-86	83.8	157	37.3	0	0	0	0	108.4	R6 N10	R6-T8 VanDerWaalsContact C-N 3.33Å; R6-T8 HydrophobicContact CG-CG2 4.49Å; R6-T8 PolarHBondContact O-N 2.93Å; T8-N10 PolarHBondContact O-N 3.44Å; T8-N10 VanDerWaalsContact O-N 3.1Å
9	T	36.7	Very low	43.3	Very low	132 Å²	132	132.8 Å²	132.8	81%	0.81	71%	0.707	S	S	*	*			trans	-58.5	99.5	154	-21.1	0	0	0	0	107	S7	S7-T9 VanDerWaalsContact C-N 3.33Å; S7-T9 PolarHBondContact O-N 3.33Å
10	N	39.8	Very low	44.3	Very low	139 Å²	139	134.7 Å²	134.7	74%	0.743	70%	0.703	S	S	*	*			trans	-158.4	100.2	166.8	-117.1	-9.7	0	0	0	112.3	T8 N12	T8-N10 PolarHBondContact O-N 3.44Å; T8-N10 VanDerWaalsContact O-N 3.1Å; N10-N12 PolarHBondContact O-N 3.43Å
11	A	42.2	Very low	45.1	Very low	97 Å²	97	132.1 Å²	132.1	80%	0.802	69%	0.685	S	S	*	*	S	Bend	trans	59.4	-1.2	145	0	0	0	0	0	123.1
12	N	41.8	Very low	46.3	Very low	109 Å²	109	121.2 Å²	121.2	58%	0.583	63%	0.632	S	S	*	*			trans	-109.7	3	-177.2	-89.3	-48.8	0	0	0	116.7	N10 N14 I15	N10-N12 PolarHBondContact O-N 3.43Å; N12-N14 PolarHBondContact O-N 2.82Å; N12-I15 WeakPolarHBondContact OD1-CD1 3.1Å
13	S	43.6	Very low	47.5	Very low	102 Å²	102	124.8 Å²	124.8	71%	0.713	63%	0.628	S	S	*	*	T	Hydrogen-bonded Turn	trans	-80.1	-10.3	-173.6	-46.5	0	0	0	0	115.2
14	N	44.1	Very low	48.5	Very low	134 Å²	134	122.5 Å²	122.5	72%	0.717	62%	0.617	S	S	*	*	T	Hydrogen-bonded Turn	trans	-102.3	-5.8	-173.8	-79.2	13.1	0	0	0	115.1	N12 F16	N12-N14 PolarHBondContact O-N 2.82Å; N14-F16 VanDerWaalsContact C-N 3.3Å; N14-F16 PolarHBondContact O-N 3.23Å
15	I	47.3	Very low	49.5	Very low	87 Å²	87	111.1 Å²	111.1	45%	0.446	58%	0.575	S	S	.	*	T	Hydrogen-bonded Turn	trans	-77	-19.9	-174.9	-58	171.7	0	0	0	111.8	N12	N12-I15 WeakPolarHBondContact OD1-CD1 3.1Å
16	F	51.8	Low	50.5	Low	49 Å²	49	109.9 Å²	109.9	22%	0.215	56%	0.563	C	S	.	*	T	Hydrogen-bonded Turn	trans	-110.7	9.9	-164.5	-59.3	-90.8	0	0	0	114.9	N14 Y21 I49 I51	N14-F16 VanDerWaalsContact C-N 3.3Å; N14-F16 PolarHBondContact O-N 3.23Å; F16-Y21 AromaticContact CD1-CD1 3.71Å; F16-Y21 HydrophobicContact CD1-CD1 3.71Å; F16-Y21 AromaticContact CD1-CE1 3.45Å; F16-Y21 HydrophobicContact CD1-CE1 3.45Å; F16-Y21 VanDerWaalsContact CD1-CE1 3.45Å; F16-Y21 HydrophobicContact CE1-CD1 4.09Å; F16-Y21 AromaticContact CE1-CE1 3.33Å; F16-Y21 HydrophobicContact CE1-CE1 3.33Å; F16-Y21 HydrophobicContact CZ-CE1 4.39Å; F16-I49 HydrophobicContact CD1-CG2 4.36Å; F16-I49 HydrophobicContact CE1-CD1 4.29Å; F16-I49 HydrophobicContact CE1-CG2 3.76Å; F16-I49 HydrophobicContact CZ-CD1 4.34Å; F16-I49 HydrophobicContact CZ-CG2 4.01Å; F16-I51 HydrophobicContact CB-CG1 4.49Å; F16-I51 HydrophobicContact CB-CG2 4.22Å; F16-I51 HydrophobicContact CD1-CD1 3.89Å; F16-I51 HydrophobicContact CD1-CG1 3.96Å; F16-I51 HydrophobicContact CG-CG1 4.48Å
17	Q	51.2	Low	51.8	Low	119 Å²	119	108.5 Å²	108.5	56%	0.556	56%	0.563	S	S	*	*			trans	-84.1	-8.4	178.2	-64.6	-173	15.8	0	0	113.9	C55	Q17-C55 HydrophobicContact CG-CB 4.36Å; Q17-C55 PolarHBondContact NE2-SG 2.87Å
18	D	56.1	Low	53	Low	66 Å²	66	107.8 Å²	107.8	35%	0.353	56%	0.558	S	S	.	*			trans	-92.6	114.4	-178.6	-160.6	-64.6	0	0	0	109.8	R20 Y21	D18-R20 PolarHBondContact O-N 2.94Å; D18-R20 WeakPolarHBondContact OD1-CA 3.5Å; D18-R20 WeakPolarHBondContact OD1-CB 3.07Å; D18-R20 WeakPolarHBondContact OD1-CG 2.98Å; D18-R20 IonicContact OD1-CZ 3.46Å; D18-R20 PolarHBondContact OD1-N 2.93Å; D18-R20 IonicContact OD1-NE 3.23Å; D18-R20 PolarHBondContact OD1-NE 2.99Å; D18-R20 IonicContact OD1-NH2 2.82Å; D18-R20 IonicContact OD2-CZ 3.85Å; D18-R20 IonicContact OD2-NE 2.87Å; D18-R20 PolarHBondContact OD2-NE 3.43Å; D18-R20 IonicContact OD2-NH2 3.93Å; D18-R20 PolarHBondContact OD2-NH2 3.43Å; D18-Y21 VanDerWaalsContact O-CB 3.29Å; D18-Y21 WeakPolarHBondContact O-CB 3.2Å; D18-Y21 PolarHBondContact O-N 3.1Å
19	E	58.9	Low	53.8	Low	147 Å²	147	105.8 Å²	105.8	69%	0.687	56%	0.559	S	S	*	*	H	α-helix	trans	-51.6	-24.8	175.5	-70.5	-176.6	77.3	0	0	112.8	Y21 I22 K23	E19-Y21 VanDerWaalsContact C-N 3.28Å; E19-Y21 PolarHBondContact O-N 3.3Å; E19-I22 PolarHBondContact O-N 2.54Å; E19-K23 WeakPolarHBondContact O-CG 3.47Å; E19-K23 PolarHBondContact O-N 2.66Å
20	R	62.8	Low	54.9	Low	169 Å²	169	101.1 Å²	101.1	64%	0.638	53%	0.532	S	S	*	.	H	α-helix	trans	-65.8	-31.5	174.9	-58.3	177.1	-85.1	-167.7	-7.1	111.9	D18 K23 Q24	D18-R20 PolarHBondContact O-N 2.94Å; D18-R20 WeakPolarHBondContact OD1-CA 3.5Å; D18-R20 WeakPolarHBondContact OD1-CB 3.07Å; D18-R20 WeakPolarHBondContact OD1-CG 2.98Å; D18-R20 IonicContact OD1-CZ 3.46Å; D18-R20 PolarHBondContact OD1-N 2.93Å; D18-R20 IonicContact OD1-NE 3.23Å; D18-R20 PolarHBondContact OD1-NE 2.99Å; D18-R20 IonicContact OD1-NH2 2.82Å; D18-R20 IonicContact OD2-CZ 3.85Å; D18-R20 IonicContact OD2-NE 2.87Å; D18-R20 PolarHBondContact OD2-NE 3.43Å; D18-R20 IonicContact OD2-NH2 3.93Å; D18-R20 PolarHBondContact OD2-NH2 3.43Å; R20-K23 PolarHBondContact O-N 2.87Å; R20-Q24 WeakPolarHBondContact O-CB 3.17Å; R20-Q24 WeakPolarHBondContact O-CG 3.08Å; R20-Q24 PolarHBondContact O-N 3.36Å
21	Y	62.2	Low	55.9	Low	81 Å²	81	100.7 Å²	100.7	32%	0.318	53%	0.529	S	S	.	.	H	α-helix	trans	-67	-44.4	176.6	-167.4	-100.8	0	0	0	110.8	F16 D18 E19 K23 Q24 I25	F16-Y21 AromaticContact CD1-CD1 3.71Å; F16-Y21 HydrophobicContact CD1-CD1 3.71Å; F16-Y21 AromaticContact CD1-CE1 3.45Å; F16-Y21 HydrophobicContact CD1-CE1 3.45Å; F16-Y21 VanDerWaalsContact CD1-CE1 3.45Å; F16-Y21 HydrophobicContact CE1-CD1 4.09Å; F16-Y21 AromaticContact CE1-CE1 3.33Å; F16-Y21 HydrophobicContact CE1-CE1 3.33Å; F16-Y21 HydrophobicContact CZ-CE1 4.39Å; D18-Y21 VanDerWaalsContact O-CB 3.29Å; D18-Y21 WeakPolarHBondContact O-CB 3.2Å; D18-Y21 PolarHBondContact O-N 3.1Å; E19-Y21 VanDerWaalsContact C-N 3.28Å; E19-Y21 PolarHBondContact O-N 3.3Å; Y21-K23 VanDerWaalsContact C-N 3.33Å; Y21-K23 PolarHBondContact O-N 3.3Å; Y21-Q24 PolarHBondContact O-N 2.97Å; Y21-I25 HydrophobicContact CD1-CD1 3.43Å; Y21-I25 VanDerWaalsContact CD1-CD1 3.43Å; Y21-I25 HydrophobicContact CD1-CG1 4.26Å; Y21-I25 HydrophobicContact CE1-CD1 3.26Å; Y21-I25 HydrophobicContact CE1-CG1 4.04Å; Y21-I25 HydrophobicContact CG-CD1 4.4Å; Y21-I25 VanDerWaalsContact O-CG1 3.29Å; Y21-I25 WeakPolarHBondContact O-CG1 3.36Å; Y21-I25 PolarHBondContact O-N 2.73Å
22	I	61.5	Low	57	Low	28 Å²	28	98 Å²	98	14%	0.144	50%	0.502	C	S	.	.	H	α-helix	trans	-62.2	-40.6	174.5	-59.6	174.9	0	0	0	110.9	E19 I25 K26 I51	E19-I22 PolarHBondContact O-N 2.54Å; I22-I25 PolarHBondContact O-N 3.4Å; I22-K26 HydrophobicContact CG2-CD 4.48Å; I22-K26 WeakPolarHBondContact O-CG 3.29Å; I22-K26 PolarHBondContact O-N 3.04Å; I22-I51 HydrophobicContact CD1-CG2 4.16Å; I22-I51 HydrophobicContact CG1-CD1 4.48Å
23	K	64	Low	58.3	Low	143 Å²	143	95 Å²	95	62%	0.622	49%	0.49	S	S	*	.	H	α-helix	trans	-64.1	-41	175.6	-74.8	177.6	-178.9	174.1	0	112.5	E19 R20 Y21 K26 K27	E19-K23 WeakPolarHBondContact O-CG 3.47Å; E19-K23 PolarHBondContact O-N 2.66Å; R20-K23 PolarHBondContact O-N 2.87Å; Y21-K23 VanDerWaalsContact C-N 3.33Å; Y21-K23 PolarHBondContact O-N 3.3Å; K23-K26 PolarHBondContact O-N 3.39Å; K23-K27 PolarHBondContact O-N 2.87Å; K23-K27 VanDerWaalsContact O-N 3.1Å
24	Q	61.2	Low	59.5	Low	134 Å²	134	95.5 Å²	95.5	63%	0.626	48%	0.479	S	S	*	.	H	α-helix	trans	-64.4	-42.5	175.5	-78	-173.3	83.1	0	0	111.8	R20 Y21 K26 K27 S28	R20-Q24 WeakPolarHBondContact O-CB 3.17Å; R20-Q24 WeakPolarHBondContact O-CG 3.08Å; R20-Q24 PolarHBondContact O-N 3.36Å; Y21-Q24 PolarHBondContact O-N 2.97Å; Q24-K26 PolarHBondContact O-N 3.21Å; Q24-K27 WeakPolarHBondContact O-CB 3.05Å; Q24-K27 PolarHBondContact O-N 2.82Å; Q24-K27 VanDerWaalsContact O-N 3.16Å; Q24-S28 PolarHBondContact O-N 2.98Å
25	I	60.7	Low	60.6	Low	9 Å²	9	95.3 Å²	95.3	5%	0.046	47%	0.469	C	S	.	.	H	α-helix	trans	-58.7	-49.7	175.2	-72.6	166	0	0	0	111.3	Y21 I22 K27 S28 V32 M41 I51	Y21-I25 HydrophobicContact CD1-CD1 3.43Å; Y21-I25 VanDerWaalsContact CD1-CD1 3.43Å; Y21-I25 HydrophobicContact CD1-CG1 4.26Å; Y21-I25 HydrophobicContact CE1-CD1 3.26Å; Y21-I25 HydrophobicContact CE1-CG1 4.04Å; Y21-I25 HydrophobicContact CG-CD1 4.4Å; Y21-I25 VanDerWaalsContact O-CG1 3.29Å; Y21-I25 WeakPolarHBondContact O-CG1 3.36Å; Y21-I25 PolarHBondContact O-N 2.73Å; I22-I25 PolarHBondContact O-N 3.4Å; I25-K27 PolarHBondContact O-N 3.42Å; I25-S28 WeakPolarHBondContact O-CB 3.49Å; I25-S28 PolarHBondContact O-N 3.44Å; I25-V32 HydrophobicContact CG2-CG2 3.31Å; I25-M41 HydrophobicContact CB-CE 4.21Å; I25-M41 HydrophobicContact CB-SD 4.16Å; I25-M41 HydrophobicContact CD1-CE 4.19Å; I25-M41 HydrophobicContact CD1-SD 3.41Å; I25-M41 WeakPolarHBondContact CD1-SD 3.41Å; I25-M41 HydrophobicContact CG1-CE 3.78Å; I25-M41 HydrophobicContact CG1-SD 3.67Å; I25-M41 HydrophobicContact CG2-CE 3.5Å; I25-M41 HydrophobicContact CG2-CG 3.99Å; I25-M41 HydrophobicContact CG2-SD 3.38Å; I25-M41 WeakPolarHBondContact CG2-SD 3.45Å; I25-I51 HydrophobicContact CD1-CD1 4.15Å
26	K	61.6	Low	61.7	Low	125 Å²	125	94 Å²	94	54%	0.543	48%	0.477	S	S	.	.	H	α-helix	trans	-57.8	-35.2	178	-76.8	-179.8	177.3	-178.1	0	111.5	I22 K23 Q24	I22-K26 HydrophobicContact CG2-CD 4.48Å; I22-K26 WeakPolarHBondContact O-CG 3.29Å; I22-K26 PolarHBondContact O-N 3.04Å; K23-K26 PolarHBondContact O-N 3.39Å; Q24-K26 PolarHBondContact O-N 3.21Å
27	K	64.5	Low	62.4	Low	192 Å²	192	96.1 Å²	96.1	84%	0.835	49%	0.491	S	S	*	.	H	α-helix	trans	-73	-27	176.8	-165.5	175.7	-179.1	-177.7	0	113.2	K23 Q24 I25 G29	K23-K27 PolarHBondContact O-N 2.87Å; K23-K27 VanDerWaalsContact O-N 3.1Å; Q24-K27 WeakPolarHBondContact O-CB 3.05Å; Q24-K27 PolarHBondContact O-N 2.82Å; Q24-K27 VanDerWaalsContact O-N 3.16Å; I25-K27 PolarHBondContact O-N 3.42Å; K27-G29 PolarHBondContact O-N 3.38Å
28	S	61.4	Low	63.1	Low	92 Å²	92	94.4 Å²	94.4	64%	0.643	48%	0.482	S	S	*	.	T	Hydrogen-bonded Turn	trans	-77.3	2.7	-178.9	-166.9	0	0	0	0	114.2	Q24 I25 S30	Q24-S28 PolarHBondContact O-N 2.98Å; I25-S28 WeakPolarHBondContact O-CB 3.49Å; I25-S28 PolarHBondContact O-N 3.44Å; S28-S30 PolarHBondContact O-N 2.91Å
29	G	55.7	Low	63.6	Low	68 Å²	68	93 Å²	93	70%	0.701	47%	0.472	S	S	*	.	T	Hydrogen-bonded Turn	trans	69.5	13	-176.6	0	0	0	0	0	114	K27	K27-G29 PolarHBondContact O-N 3.38Å
30	S	61.2	Low	64	Low	34 Å²	34	87.9 Å²	87.9	24%	0.238	45%	0.447	C	S	.	.			trans	-72.3	133.2	175	-64.6	0	0	0	0	110.3	S28 V32 M41	S28-S30 PolarHBondContact O-N 2.91Å; S30-V32 PolarHBondContact O-N 2.77Å; S30-M41 WeakPolarHBondContact OG-CE 3.38Å
31	L	60.4	Low	64.1	Low	130 Å²	130	80.5 Å²	80.5	68%	0.681	42%	0.42	S	S	*	.	E	Extended strand (participates in β ladder)	trans	-67.6	104.9	177.1	-78.7	157.7	0	0	0	109.3	M41 H42	L31-M41 WeakPolarHBondContact O-CA 3.29Å; L31-H42 HydrophobicContact CB-CB 4.22Å; L31-H42 PolarHBondContact O-N 3.16Å
32	V	64.2	Low	64.2	Low	41 Å²	41	80.2 Å²	80.2	25%	0.248	42%	0.422	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-106.7	116.4	172.6	-175	0	0	0	0	108.7	I25 S30 Y39 K40 M41	I25-V32 HydrophobicContact CG2-CG2 3.31Å; S30-V32 PolarHBondContact O-N 2.77Å; V32-Y39 HydrophobicContact CG1-CD1 3.65Å; V32-Y39 HydrophobicContact CG1-CG 4.18Å; V32-K40 CarbonylContact C-O 3.51Å; V32-K40 WeakPolarHBondContact CA-O 3.49Å; V32-M41 HydrophobicContact CG2-CB 4.29Å; V32-M41 HydrophobicContact CG2-CG 4.13Å
33	S	68.7	Low	64	Low	45 Å²	45	80.5 Å²	80.5	32%	0.315	43%	0.426	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-107.5	126.3	175.2	-61.5	0	0	0	0	109.6	Y35 Y39 K40	S33-Y35 WeakPolarHBondContact O-CD2 3.47Å; S33-Y39 CarbonylContact O-C 3.53Å; S33-Y39 WeakPolarHBondContact O-CA 3.43Å; S33-K40 PolarHBondContact N-O 3.01Å; S33-K40 PolarHBondContact O-N 3.4Å
34	K	69.7	Low	63.5	Low	113 Å²	113	83.4 Å²	83.4	49%	0.491	44%	0.441	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-80.1	129.3	173.8	-174.9	174.8	172.2	167.8	0	109.8	G36 F38 Y39 E53	K34-G36 WeakPolarHBondContact CE-O 3.27Å; K34-F38 CarbonylContact C-O 3.3Å; K34-F38 WeakPolarHBondContact CA-O 3.49Å; K34-Y39 HydrophobicContact CB-CD1 3.95Å; K34-Y39 HydrophobicContact CB-CE1 3.88Å; K34-Y39 HydrophobicContact CD-CE1 4.08Å; K34-Y39 HydrophobicContact CG-CD1 4.28Å; K34-Y39 HydrophobicContact CG-CE1 4.03Å; K34-E53 WeakPolarHBondContact CE-OE2 3.46Å; K34-E53 IonicContact NZ-OE1 2.87Å; K34-E53 PolarHBondContact NZ-OE1 3Å; K34-E53 IonicContact NZ-OE2 2.66Å; K34-E53 PolarHBondContact NZ-OE2 2.91Å
35	Y	67.2	Low	63.5	Low	129 Å²	129	83.7 Å²	83.7	51%	0.506	45%	0.448	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-124.8	91.4	175.4	-73.3	-85.5	0	0	0	109.2	S33 D37 F38 K40	S33-Y35 WeakPolarHBondContact O-CD2 3.47Å; Y35-D37 PolarHBondContact O-N 2.65Å; Y35-F38 CarbonylContact C-O 3.46Å; Y35-F38 PolarHBondContact N-O 3.24Å; Y35-F38 WeakPolarHBondContact O-CA 3.17Å; Y35-F38 WeakPolarHBondContact O-CB 3.44Å; Y35-F38 PolarHBondContact O-N 2.71Å; Y35-K40 HydrophobicContact CD2-CB 3.55Å; Y35-K40 HydrophobicContact CD2-CD 4.32Å; Y35-K40 HydrophobicContact CE2-CB 3.59Å; Y35-K40 HydrophobicContact CE2-CD 3.66Å; Y35-K40 HydrophobicContact CE2-CG 4.29Å
36	G	70.2	Confident	63.3	Low	60 Å²	60	86.3 Å²	86.3	62%	0.619	48%	0.477	S	S	*	.	T	Hydrogen-bonded Turn	trans	58.2	-120.5	-176.7	0	0	0	0	0	111.4	K34 F38	K34-G36 WeakPolarHBondContact CE-O 3.27Å; G36-F38 PolarHBondContact O-N 2.94Å
37	D	67.9	Low	63.1	Low	94 Å²	94	85.8 Å²	85.8	50%	0.503	48%	0.48	S	S	.	.	T	Hydrogen-bonded Turn	trans	-79.7	5	174.9	-65.2	-72.4	0	0	0	114.2	Y35 R52 E53	Y35-D37 PolarHBondContact O-N 2.65Å; D37-R52 CarbonylContact O-C 3.52Å; D37-R52 WeakPolarHBondContact O-CA 3.17Å; D37-E53 PolarHBondContact O-N 3.34Å
38	F	65.4	Low	63	Low	83 Å²	83	79.8 Å²	79.8	36%	0.364	46%	0.457	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-119.9	157.3	-177.5	-58.1	-104.3	0	0	0	111.6	K34 Y35 G36 I51 R52	K34-F38 CarbonylContact C-O 3.3Å; K34-F38 WeakPolarHBondContact CA-O 3.49Å; Y35-F38 CarbonylContact C-O 3.46Å; Y35-F38 PolarHBondContact N-O 3.24Å; Y35-F38 WeakPolarHBondContact O-CA 3.17Å; Y35-F38 WeakPolarHBondContact O-CB 3.44Å; Y35-F38 PolarHBondContact O-N 2.71Å; G36-F38 PolarHBondContact O-N 2.94Å; F38-I51 CarbonylContact C-O 3.4Å; F38-I51 VanDerWaalsContact C-O 3.3Å; F38-I51 WeakPolarHBondContact CA-O 3.4Å; F38-R52 HydrophobicContact CD1-CB 4.37Å; F38-R52 HydrophobicContact CD1-CG 3.23Å; F38-R52 HydrophobicContact CD2-CG 4.41Å; F38-R52 HydrophobicContact CE1-CB 4.46Å; F38-R52 HydrophobicContact CE1-CG 3.03Å; F38-R52 HydrophobicContact CE2-CG 4.23Å; F38-R52 HydrophobicContact CG-CG 3.95Å; F38-R52 HydrophobicContact CZ-CG 3.57Å
39	Y	66.8	Low	63.1	Low	35 Å²	35	77.7 Å²	77.7	14%	0.137	44%	0.438	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-117.9	119.7	168.1	-69.7	-86.1	0	0	0	107.6	V32 S33 K34 F50 I51 E53	V32-Y39 HydrophobicContact CG1-CD1 3.65Å; V32-Y39 HydrophobicContact CG1-CG 4.18Å; S33-Y39 CarbonylContact O-C 3.53Å; S33-Y39 WeakPolarHBondContact O-CA 3.43Å; K34-Y39 HydrophobicContact CB-CD1 3.95Å; K34-Y39 HydrophobicContact CB-CE1 3.88Å; K34-Y39 HydrophobicContact CD-CE1 4.08Å; K34-Y39 HydrophobicContact CG-CD1 4.28Å; K34-Y39 HydrophobicContact CG-CE1 4.03Å; Y39-F50 CarbonylContact O-C 3.56Å; Y39-F50 VanDerWaalsContact O-CA 3.27Å; Y39-F50 WeakPolarHBondContact O-CA 3.44Å; Y39-I51 PolarHBondContact N-O 3.05Å; Y39-I51 PolarHBondContact O-N 3Å; Y39-E53 HydrophobicContact CD2-CB 4.33Å; Y39-E53 HydrophobicContact CE2-CB 3.73Å; Y39-E53 HydrophobicContact CE2-CG 3.81Å; Y39-E53 WeakPolarHBondContact CE2-OE2 3.48Å; Y39-E53 PolarHBondContact OH-OE2 3.03Å
40	K	66.8	Low	63.4	Low	40 Å²	40	80.6 Å²	80.6	17%	0.174	43%	0.432	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-91.1	115	170	-173.9	-174.2	-175.4	-163.6	0	108.4	V32 S33 Y35 H42 N48 I49 F50	V32-K40 CarbonylContact C-O 3.51Å; V32-K40 WeakPolarHBondContact CA-O 3.49Å; S33-K40 PolarHBondContact N-O 3.01Å; S33-K40 PolarHBondContact O-N 3.4Å; Y35-K40 HydrophobicContact CD2-CB 3.55Å; Y35-K40 HydrophobicContact CD2-CD 4.32Å; Y35-K40 HydrophobicContact CE2-CB 3.59Å; Y35-K40 HydrophobicContact CE2-CD 3.66Å; Y35-K40 HydrophobicContact CE2-CG 4.29Å; K40-H42 WeakPolarHBondContact CE-NE2 3.36Å; K40-H42 PolarHBondContact NZ-CE1 3.5Å; K40-H42 PolarHBondContact NZ-NE2 3.1Å; K40-N48 HydrophobicContact CG-CB 4.46Å; K40-I49 CarbonylContact C-O 3.53Å; K40-I49 WeakPolarHBondContact CA-O 3.29Å; K40-F50 HydrophobicContact CB-CD1 4.04Å; K40-F50 HydrophobicContact CB-CE1 4.01Å; K40-F50 HydrophobicContact CD-CE1 3.84Å; K40-F50 HydrophobicContact CD-CZ 4.17Å; K40-F50 HydrophobicContact CG-CD1 4.07Å; K40-F50 HydrophobicContact CG-CE1 3.67Å; K40-F50 HydrophobicContact CG-CZ 4.09Å
41	M	65.4	Low	63.5	Low	14 Å²	14	79.3 Å²	79.3	7%	0.069	42%	0.422	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-99	124.1	171.3	-178.1	-175.6	172.5	0	0	108.7	I25 S30 L31 V32 N48 I49	I25-M41 HydrophobicContact CB-CE 4.21Å; I25-M41 HydrophobicContact CB-SD 4.16Å; I25-M41 HydrophobicContact CD1-CE 4.19Å; I25-M41 HydrophobicContact CD1-SD 3.41Å; I25-M41 WeakPolarHBondContact CD1-SD 3.41Å; I25-M41 HydrophobicContact CG1-CE 3.78Å; I25-M41 HydrophobicContact CG1-SD 3.67Å; I25-M41 HydrophobicContact CG2-CE 3.5Å; I25-M41 HydrophobicContact CG2-CG 3.99Å; I25-M41 HydrophobicContact CG2-SD 3.38Å; I25-M41 WeakPolarHBondContact CG2-SD 3.45Å; S30-M41 WeakPolarHBondContact OG-CE 3.38Å; L31-M41 WeakPolarHBondContact O-CA 3.29Å; V32-M41 HydrophobicContact CG2-CB 4.29Å; V32-M41 HydrophobicContact CG2-CG 4.13Å; M41-N48 CarbonylContact O-C 3.56Å; M41-N48 VanDerWaalsContact O-CA 3.29Å; M41-N48 WeakPolarHBondContact O-CA 3.37Å; M41-I49 HydrophobicContact CB-CB 4.38Å; M41-I49 PolarHBondContact N-O 3.25Å; M41-I49 PolarHBondContact O-N 3.26Å
42	H	63.3	Low	63.5	Low	75 Å²	75	80.5 Å²	80.5	35%	0.347	42%	0.417	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-87	112.1	170.2	-80.7	-104.7	0	0	0	109	L31 K40 N48	L31-H42 HydrophobicContact CB-CB 4.22Å; L31-H42 PolarHBondContact O-N 3.16Å; K40-H42 WeakPolarHBondContact CE-NE2 3.36Å; K40-H42 PolarHBondContact NZ-CE1 3.5Å; K40-H42 PolarHBondContact NZ-NE2 3.1Å; H42-N48 PolarHBondContact CE1-OD1 3.01Å; H42-N48 VanDerWaalsContact CG-OD1 3.29Å; H42-N48 PolarHBondContact ND1-OD1 2.73Å
43	C	58.1	Low	63	Low	35 Å²	35	82.2 Å²	82.2	24%	0.236	42%	0.423	C	S	.	.			trans	-88.5	144	169.8	-60.4	0	0	0	0	109.7	N45 G46 N47	C43-N45 PolarHBondContact O-N 2.76Å; C43-G46 PolarHBondContact O-N 2.79Å; C43-G46 VanDerWaalsContact O-N 3.13Å; C43-N47 VanDerWaalsContact CB-O 3.23Å; C43-N47 WeakPolarHBondContact CB-O 3.44Å; C43-N47 PolarHBondContact N-O 3.44Å
44	Q	52.5	Low	62.2	Low	203 Å²	203	87.6 Å²	87.6	95%	0.949	44%	0.44	S	S	*	.	T	Hydrogen-bonded Turn	trans	-58	-20.5	179.6	-75	179.3	-23.1	0	0	113.5	G46	Q44-G46 PolarHBondContact O-N 2.98Å; Q44-G46 VanDerWaalsContact O-N 3.16Å
45	N	62.1	Low	60.9	Low	141 Å²	141	87 Å²	87	75%	0.754	45%	0.45	S	S	*	.	T	Hydrogen-bonded Turn	trans	-79.8	16.1	177.9	-64.7	3.5	0	0	0	113.9	C43 N47	C43-N45 PolarHBondContact O-N 2.76Å; N45-N47 PolarHBondContact O-N 2.89Å; N45-N47 VanDerWaalsContact O-N 3.13Å
46	G	56.5	Low	59.5	Low	64 Å²	64	83.7 Å²	83.7	66%	0.66	45%	0.454	S	S	*	.	S	Bend	trans	74.4	-4.5	-178.3	0	0	0	0	0	114.7	C43 Q44	C43-G46 PolarHBondContact O-N 2.79Å; C43-G46 VanDerWaalsContact O-N 3.13Å; Q44-G46 PolarHBondContact O-N 2.98Å; Q44-G46 VanDerWaalsContact O-N 3.16Å
47	N	57.3	Low	57.9	Low	113 Å²	113	87.8 Å²	87.8	60%	0.604	46%	0.457	S	S	*	.			trans	-85.1	128	175.8	-68.8	-46.2	0	0	0	110.2	C43 N45	C43-N47 VanDerWaalsContact CB-O 3.23Å; C43-N47 WeakPolarHBondContact CB-O 3.44Å; C43-N47 PolarHBondContact N-O 3.44Å; N45-N47 PolarHBondContact O-N 2.89Å; N45-N47 VanDerWaalsContact O-N 3.13Å
48	N	62.7	Low	56.6	Low	67 Å²	67	90.3 Å²	90.3	36%	0.358	47%	0.471	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-100.4	130.6	171.1	-61.7	-50	0	0	0	109.1	K40 M41 H42 F50	K40-N48 HydrophobicContact CG-CB 4.46Å; M41-N48 CarbonylContact O-C 3.56Å; M41-N48 VanDerWaalsContact O-CA 3.29Å; M41-N48 WeakPolarHBondContact O-CA 3.37Å; H42-N48 PolarHBondContact CE1-OD1 3.01Å; H42-N48 VanDerWaalsContact CG-OD1 3.29Å; H42-N48 PolarHBondContact ND1-OD1 2.73Å; N48-F50 HydrophobicContact CB-CE2 4.17Å; N48-F50 HydrophobicContact CB-CZ 4.48Å
49	I	62.2	Low	55.1	Low	47 Å²	47	94.2 Å²	94.2	24%	0.241	49%	0.488	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-105.2	132.6	175.5	-55.6	175.5	0	0	0	108.2	F16 K40 M41 I51	F16-I49 HydrophobicContact CD1-CG2 4.36Å; F16-I49 HydrophobicContact CE1-CD1 4.29Å; F16-I49 HydrophobicContact CE1-CG2 3.76Å; F16-I49 HydrophobicContact CZ-CD1 4.34Å; F16-I49 HydrophobicContact CZ-CG2 4.01Å; K40-I49 CarbonylContact C-O 3.53Å; K40-I49 WeakPolarHBondContact CA-O 3.29Å; M41-I49 HydrophobicContact CB-CB 4.38Å; M41-I49 PolarHBondContact N-O 3.25Å; M41-I49 PolarHBondContact O-N 3.26Å; I49-I51 HydrophobicContact CG2-CG1 4.06Å
50	F	63.1	Low	53.5	Low	130 Å²	130	100 Å²	100	57%	0.57	52%	0.52	S	S	*	.	E	Extended strand (participates in β ladder)	trans	-108.8	122.7	175.6	-61	-94.8	0	0	0	109.5	Y39 K40 N48	Y39-F50 CarbonylContact O-C 3.56Å; Y39-F50 VanDerWaalsContact O-CA 3.27Å; Y39-F50 WeakPolarHBondContact O-CA 3.44Å; K40-F50 HydrophobicContact CB-CD1 4.04Å; K40-F50 HydrophobicContact CB-CE1 4.01Å; K40-F50 HydrophobicContact CD-CE1 3.84Å; K40-F50 HydrophobicContact CD-CZ 4.17Å; K40-F50 HydrophobicContact CG-CD1 4.07Å; K40-F50 HydrophobicContact CG-CE1 3.67Å; K40-F50 HydrophobicContact CG-CZ 4.09Å; N48-F50 HydrophobicContact CB-CE2 4.17Å; N48-F50 HydrophobicContact CB-CZ 4.48Å
51	I	62.7	Low	52	Low	7 Å²	7	106 Å²	106	4%	0.036	58%	0.577	C	S	.	*	E	Extended strand (participates in β ladder)	trans	-118.8	123.5	-175.9	-54.2	170.4	0	0	0	109	F16 I22 I25 F38 Y39 I49	F16-I51 HydrophobicContact CB-CG1 4.49Å; F16-I51 HydrophobicContact CB-CG2 4.22Å; F16-I51 HydrophobicContact CD1-CD1 3.89Å; F16-I51 HydrophobicContact CD1-CG1 3.96Å; F16-I51 HydrophobicContact CG-CG1 4.48Å; I22-I51 HydrophobicContact CD1-CG2 4.16Å; I22-I51 HydrophobicContact CG1-CD1 4.48Å; I25-I51 HydrophobicContact CD1-CD1 4.15Å; F38-I51 CarbonylContact C-O 3.4Å; F38-I51 VanDerWaalsContact C-O 3.3Å; F38-I51 WeakPolarHBondContact CA-O 3.4Å; Y39-I51 PolarHBondContact N-O 3.05Å; Y39-I51 PolarHBondContact O-N 3Å; I49-I51 HydrophobicContact CG2-CG1 4.06Å
52	R	60.8	Low	51.3	Low	155 Å²	155	110.6 Å²	110.6	59%	0.585	60%	0.602	S	S	*	*	E	Extended strand (participates in β ladder)	trans	-74.2	137.5	172.5	-76.1	179.3	94.6	-175.8	0.9	111.6	D37 F38 K54	D37-R52 CarbonylContact O-C 3.52Å; D37-R52 WeakPolarHBondContact O-CA 3.17Å; F38-R52 HydrophobicContact CD1-CB 4.37Å; F38-R52 HydrophobicContact CD1-CG 3.23Å; F38-R52 HydrophobicContact CD2-CG 4.41Å; F38-R52 HydrophobicContact CE1-CB 4.46Å; F38-R52 HydrophobicContact CE1-CG 3.03Å; F38-R52 HydrophobicContact CE2-CG 4.23Å; F38-R52 HydrophobicContact CG-CG 3.95Å; F38-R52 HydrophobicContact CZ-CG 3.57Å; R52-K54 VanDerWaalsContact C-N 3.29Å; R52-K54 PolarHBondContact O-N 3.49Å
53	E	53.1	Low	50.7	Low	77 Å²	77	112.4 Å²	112.4	36%	0.36	62%	0.616	S	S	.	*	S	Bend	trans	-68.7	-24.3	178.3	-172.8	166	110.8	0	0	112.8	K34 D37 Y39	K34-E53 WeakPolarHBondContact CE-OE2 3.46Å; K34-E53 IonicContact NZ-OE1 2.87Å; K34-E53 PolarHBondContact NZ-OE1 3Å; K34-E53 IonicContact NZ-OE2 2.66Å; K34-E53 PolarHBondContact NZ-OE2 2.91Å; D37-E53 PolarHBondContact O-N 3.34Å; Y39-E53 HydrophobicContact CD2-CB 4.33Å; Y39-E53 HydrophobicContact CE2-CB 3.73Å; Y39-E53 HydrophobicContact CE2-CG 3.81Å; Y39-E53 WeakPolarHBondContact CE2-OE2 3.48Å; Y39-E53 PolarHBondContact OH-OE2 3.03Å
54	K	52.3	Low	50.3	Low	157 Å²	157	116.7 Å²	116.7	68%	0.683	64%	0.637	S	S	*	*			trans	-128.5	120.6	175.5	-74	-173	176.4	179.8	0	111.6	R52 G56	R52-K54 VanDerWaalsContact C-N 3.29Å; R52-K54 PolarHBondContact O-N 3.49Å; K54-G56 VanDerWaalsContact C-N 3.32Å; K54-G56 PolarHBondContact O-N 3.25Å
55	C	41.6	Very low	50.2	Low	102 Å²	102	111.6 Å²	111.6	69%	0.689	62%	0.618	S	S	*	*			trans	-82.5	84.3	156.3	-155.7	0	0	0	0	107.1	Q17	Q17-C55 HydrophobicContact CG-CB 4.36Å; Q17-C55 PolarHBondContact NE2-SG 2.87Å
56	G	38.4	Very low	49.4	Very low	58 Å²	58	109.8 Å²	109.8	60%	0.598	61%	0.61	S	S	*	*			trans	-142.4	110.1	179.9	0	0	0	0	0	109.1	K54	K54-G56 VanDerWaalsContact C-N 3.32Å; K54-G56 PolarHBondContact O-N 3.25Å
57	E	37.7	Very low	49	Very low	147 Å²	147	112.9 Å²	112.9	69%	0.687	61%	0.607	S	S	*	*			trans	56	82.7	174.8	-70.4	179.5	88.6	0	0	115.9	K59	E57-K59 PolarHBondContact O-N 3.13Å; E57-K59 WeakPolarHBondContact OE1-CD 3.23Å; E57-K59 WeakPolarHBondContact OE1-CE 3.39Å; E57-K59 IonicContact OE1-NZ 2.71Å; E57-K59 PolarHBondContact OE1-NZ 3.16Å
58	N	39.1	Very low	48.4	Very low	147 Å²	147	112.9 Å²	112.9	79%	0.786	61%	0.607	S	S	*	*			trans	-71.4	72.5	148.4	-150.3	-2.2	0	0	0	107.9	L60	N58-L60 PolarHBondContact O-N 3.13Å; N58-L60 VanDerWaalsContact O-N 3.09Å
59	K	34	Very low	47.3	Very low	165 Å²	165	116.4 Å²	116.4	72%	0.717	63%	0.626	S	S	*	*			trans	-75.8	85.4	160.4	-86.6	179.4	174.2	148	0	106.7	E57 A61	E57-K59 PolarHBondContact O-N 3.13Å; E57-K59 WeakPolarHBondContact OE1-CD 3.23Å; E57-K59 WeakPolarHBondContact OE1-CE 3.39Å; E57-K59 IonicContact OE1-NZ 2.71Å; E57-K59 PolarHBondContact OE1-NZ 3.16Å; K59-A61 PolarHBondContact O-N 3.02Å; K59-A61 VanDerWaalsContact O-N 3.1Å
60	L	35	Very low	46	Very low	155 Å²	155	122.2 Å²	122.2	81%	0.812	66%	0.658	S	S	*	*			trans	-62.5	98.4	147.6	-78.8	154.4	0	0	0	105.4	N58	N58-L60 PolarHBondContact O-N 3.13Å; N58-L60 VanDerWaalsContact O-N 3.09Å
61	A	34.4	Very low	44.5	Very low	166 Å²	166	121.5 Å²	121.5	100%	1.372	67%	0.666	S	S	*	*			trans	-91.1	0	154.5	0	0	0	0	0	107.5	K59	K59-A61 PolarHBondContact O-N 3.02Å; K59-A61 VanDerWaalsContact O-N 3.1Å

Retrieved 61 of 61 residues in 74.3 ms (Link to these results)

U.S. Privacy Notice - Disclaimer / Registrations / Copyright Statement - Linking Policy - Notice of Privacy Practices (HIPAA) - Notice of Non‑Discrimination
© Copyright 2026 St. Jude Children's Research Hospital, a not-for-profit, section 501(c)(3).